Residual Effects of Glyphosate Herbicide in Ecological Restoration

This study assesses the risks in ecological restoration arising from transplanting into soil containing glyphosate residues. Four Australian restoration species were grown for 60 days in nonadsorbing media treated continuously with glyphosate to establish threshold concentrations for damage. Visual signs of injury were observed in three species, and severe effects on root growth in all species, at solution concentrations as low as 18 mg/L. Only the perennial grass Themeda sp. died at this concentration, with other species surviving at concentrations in the range 36–360 mg/L, beyond which all plants died. Fourteen days exposure followed by removal of glyphosate from root media produced similar effects. Field and glasshouse experiments with the relatively tolerant tree species Angophora costata showed that application rates in the range 10–50 L/ha of herbicide product (360 g/L) would be needed to sustain damage to young plants transplanted into soil typical of local restoration sites. The volume of spray delivered using a hand‐operated sprayer varied between operators by 5‐ and 10‐fold to complete the same tasks, at the high end presenting a potential risk to the most tolerant species under field conditions, even when spray concentrations follow label instructions. For all but the most sensitive species, the risk of glyphosate residues in ecological restoration should be minimized by training operators of unregulated applicators to deliver controlled volumes of herbicide when spot spraying prior to transplanting.     

Characteristics of Bacteria from Oilseed Rape in Relation to their Biocontrol Activity against Verticillium dahliae

The potential of bacteria that are adapted to the oilseed rape root environment for use in the biological control of Verticillium dahliae, Kleb was investigated in both controlled and non‐sterile growth conditions. Bacterial strains dominated by the red‐pigmented members of enterobacteriaceae were isolated from thoroughly washed and air‐dried root segments of symptomless young rape plants. Other associated strains found either belonged to Alcaligenes sp., Stenotrophomonas spp. and Pseudomonas spp. (Pseudomonas acidovorans and Pseudomonas putida) or were unidentified according to fatty acid methyl ester profile analysis. A total of 19 strains isolated in this study together with two previously studied strains, Serratia proteamaculans and Pseudomonas chlororaphis, were characterized on the basis of their interactions with V. dahliae and a number of functional characteristics. In line with earlier observations with root‐colonizing fungi also from oilseed rape, all bacterial strains suppressed the pathogen not only directly and but also indirectly in in vitro assays. Mechanisms of suppression were apparently multifold among the strains, but production of hydrogen cyanide does not seem to be involved in indirect inhibition. The majority of the strains possessed the ability to produce cellulases, proteases and phosphatases and some even produced chitinases and induced hypersensitive responses, indicating their potential for nutrient acquisition as well as colonization capacity and active recognition by the plant cells. Investigations in non‐sterile field soil revealed that some strains protected rape plants from V. dahliae partly by delaying symptom development. None of the strains, however, was strongly deleterious to rape growth either in the presence or absence of the pathogen. Light microscopic observations of roots and results based on agar printing techniques revealed the potential of the studied strains to colonize or interfere with the pathogen colonization. This study provides some insight into the evolved relationship of bacterial residents with their host in terms of their potential importance in its fitness.     

Janibacter sp.对活性污泥反应器中二苯并呋喃降解的强化作用及其遗传学分析

二苯并呋喃（DF）是研究二英类化合物生物降解的模式化合物之一。本文报道了一种降解菌Janibacter sp.对活性污泥降解二苯并呋喃的强化作用,以及对其降解基因的分析结果。向反应器中添加5%的降解菌,与活性污泥共同作用,可在48h内将约56mg/L剂量的DF几乎完全降解,提高降解率28%以上。利用PCR方法,克隆和测序分析证明有DF降解基因丛的存在,并且发现以丰富培养基在高温下培养可去除该基因丛;丢失该基因丛的突变株同时失去利用DF作为唯一碳源进行生长的能力,显示其很可能位于一个大质粒上。     

Kinetics of pure cultures of hydrogen-oxidizing denitrifying bacteria and modeling of the interactions among them in mixed cultures

In this study we report the isolation of four denitrifying bacteria from a batch reactor, where the progress of hydrogenotrophic denitrification was examined. Only three of the strains had the ability to use hydrogen as electron donor. In the present work, kinetic batch experiments were carried out in order to study the dynamic characteristics of pure and defined mixed cultures of hydrogen-oxidizing denitrifying bacteria, under anoxic conditions, in a defined synthetic medium, in the presence of nitrates. Kinetic models were developed and the kinetic parameters were determined from the batch experiments for each bacterium separately. The behavior of mixed cultures and the interactions between the bacteria were described using kinetic models based on the kinetic models developed for each bacterium separately and their predictions were compared with the results from mixed culture experiments. The mathematical models that were developed and validated in the present work are capable of describing the behavior of the bacteria in pure and mixed cultures, and in particular, the kinetics of nitrate and nitrite reduction and cell growth.     

内生真菌对姜黄素的微生物转化

目的:调查姜黄根茎内生真菌对姜黄素的微生物转化,以期获得一些姜黄素的结构类似物或衍生物。方法:利用表面消毒法分离内生真菌;采用薄层层析和高效液相色谱(HPLC)技术筛选生物转化姜黄素的内生真菌;利用硅胶柱层析和制备型HPLC分离纯化生物转化产物;应用波谱技术解析转化产物的化学结构;通过形态学特征和内转录间隔区(ITS)序列分析对内生真菌进行初步鉴定。结果:从姜黄根茎中分离出18株内生真菌,经筛选发现其中1株丝状真菌能转化姜黄素,其产物分别为去甲基姜黄素和二去甲基姜黄素。初步鉴定该内生真菌属于Diaporthe sp.。结论:内生真菌Diaporthe sp.能对姜黄素进行去甲基化修饰,推测它可能具有O-去甲基化酶系。     

苯酚高效降解菌的筛选和降解特性研究

从东华理工学院北区原化学系排污口土壤中筛选到一株高效的苯酚降解细菌PS1。该菌为球菌,革兰氏染色阴性,能以苯酚为唯一碳源和能源生长。经16S rRNA基因部分序列分析PS1为Raoultella属菌株(Raoultella sp.strain PS1),其最高苯酚耐受和降解浓度在3500mg/L以上,当苯酚浓度为500mg/L和1000mg/L时,22h和32h可完全降解,在1500mg/L~3000mg/L时,32h~50h可完全降解,2500mg/L时降解速率最快,达78.1mg/h。通过正交试验得出该菌最适生长条件为25℃、pH6.5、葡萄糖500mg/L;最佳苯酚降解条件为20℃、pH7.0、葡萄糖500mg/L。     

Biosorption of Copper (II) by the Microorganisms Isolated from the Crude-Oil-Contaminated Soil

The objective of this study was to isolate and screen the highly efficient copper-removing microorganisms from the petroleum hydrocarbon (PH)-contaminated sites in the Amazonian rain forest in Ecuador. Two bacterial strains (strain UEAB3 and UEAB6) have shown 100% microbial resistance on the nutrient medium containing 100 mM of MgCl₂, FeCl₃, and Al₂(SO₄)₃ separately. Though these two strains were less tolerant of ZnCl₂ and CuSO₄.5H₂O, they have proven 100% resistance at the lower concentrations of these two metals. According to atomic absorption spectroscopy (AAS) analysis, the filamentous fungi (strains UEAFr and UEAFg) were significantly (p<0.05) effective at bacteria in the biosorption (97–100%) of copper (5 mg L^?1) over 7 d. As per 16/18S rDNA sequences, UEAB3, UEAB6, UEAFr, and UEAFg were Bacillus thuringiensis, Bacillus cereus, Geomyces pannorum, and Geomyces sp., respectively. From these results, it can be comprehensively concluded that the isolated microbial cultures had a capacity to remove the copper metal from the liquid medium.     

棉蝗肠道真菌Phoma sp. HC03除草和免疫抑制成分研究

从棉蝗肠道菌Phoma sp.HC03中分离得到一个化合物,由波谱数据解析鉴定为epoxydon 6-methylsalicylate ester。药理实验表明该化合物具有较强的除草活性和中等的免疫抑制活性。     

Occurrence and correlations of nematodes,Fusarium oxysporum and edaphic factors on banana plantations

Problems caused by nematodes and Fusarium wilt (Panama disease) on banana plantations are responsible for yield losses and are limiting to its cultivation. In the state of Goias, there is little information about the nematode occurence on this crop, and its relation with the incidence of Fusarium oxysporum f.sp. cubense (Foc). This research had the purpose to identify the occurrence of plant‐parasitic nematodes on banana plantations and to verify its correlation with the Fusarium wilt and with the soil attributes (pH, texture, nutrients). Twelve banana orchards in the state of Goias were sampled in the municipalities of Anapolis, Caiaponia, Goiatuba, Itaguaru, Itumbiara (two areas), Jatai, Morrinhos, Ouro Verde, Palestina, Taquaral and Uruana. All sampled areas, except Morrinhos, revealed contamination with Foc, and all areas had different genera of nematodes either in the soil or in the roots samples. Meloidogyne sp., Helicotylenchus sp. and Rotylenchus sp. were the main genera of plant‐parasitic nematodes found in the samples, with Meloidogyne sp. and Rotylenchus sp. being the most dominant and abundant genera. The presence of Pratylenchus sp. increases the population levels of F. oxysporum. Helicotylenchus sp. is highly correlated with high concentrations of Mn. High population density of Meloidogyne sp. was found in irrigated areas with low concentrations of P, Ca, Mg and soil pH.     

The specificity of 1-naphthol oxygenases from three bacterial isolates, Pseudomonas spp. (NCIB 12042 and 12043) and Rhodococcus sp. (NCIB 12038) isolated from garden oil

Abstract Three bacterial isolates which appeared to use the insecticide, carbaryl (1-naphthyl, N -methyl-carbamate) as their sole carbon and nitrogen sources were originally selected from garden soil. Only one isolate, Pseudomonas sp. (NCIB 12043) could metabolise carbaryl rapidly to 1-naphthol and methylamine. The other two isolates, Pseudomonas sp. (NCIB 12042) and Rhodococcus sp. (NCIB 12038) relied on slow chemical hydrolysis of carbaryl to 1-naphthol and methylamine. All three isolates used 1-naphthol as their sole carbon source; however, their ability to use naphthalene and a range of mono- and dihydroxy-substituted naphthalene compounds varied. NCIB 12038 and NCIB 12043 showed little or no growth on naphthalene, 2,3-dihydroxynaphthalene or 1,3-dihydroxynaphthalene as sole carbon sources and their 1-naphthol oxygenases had little activity with these substrates. In contrast, NCIB 12042 could use these compounds as sole carbon sources and its 1-naphthol oxygenase also showed activity with them. We conclude that 1-naphthol oxygenase from NCIB 12042 is a relatively non-specific dioxygenase, whereas the 1-naphthol oxygenases from NCIB 12038 and NCIB 12043 are relatively specific monooxygenases requiring hydroxylated naphthalene compounds as substrates.     

Physical properties of palm fruits processed with tools by wild bearded capuchins (Cebus libidinosus)

Habitually, capuchin monkeys access encased hard foods by using their canines and premolars and/or by pounding the food on hard surfaces. Instead, the wild bearded capuchins (Cebus libidinosus) of Boa Vista (Brazil) routinely crack palm fruits with tools. We measured size, weight, structure, and peak-force-at-failure of the four palm fruit species most frequently processed with tools by wild capuchin monkeys living in Boa Vista. Moreover, for each nut species we identify whether peak-force-at-failure was consistently associated with greater weight/volume, endocarp thickness, and structural complexity. The goals of this study were (a) to investigate whether these palm fruits are difficult, or impossible, to access other than with tools and (b) to collect data on the physical properties of palm fruits that are comparable to those available for the nuts cracked open with tools by wild chimpanzees. Results showed that the four nut species differ in terms of peak-force-at-failure and that peak-force-at-failure is positively associated with greater weight (and consequently volume) and apparently with structural complexity (i.e. more kernels and thus more partitions); finally for three out of four nut species shell thickness is also positively associated with greater volume. The finding that the nuts exploited by capuchins with tools have very high resistance values support the idea that tool use is indeed mandatory to crack them open. Finally, the peak-force-at-failure of the piassava nuts is similar to that reported for the very tough panda nuts cracked open by wild chimpanzees; this highlights the ecological importance of tool use for exploiting high resistance foods in this capuchin species.     

Isolation and characterization of bacterial strains with the ability to utilize high concentrations of levulinic acid,a platform chemical from inedible biomass

Nineteen levulinic acid (LA)-utilizing bacteria were isolated from environmental samples. Following examination of the use of 80 g/L LA by some isolated strains, Brevibacterium epidermidis LA39–2 consumed 62.6 g/L LA following 8 days incubation. The strain also utilized both 90 and 100 g/L LA, with consumption ratio of 84.3 and 53.3%, respectively, after 10 days incubation.     

粤北一种虫草分离菌的抗酵母现象

CR 95 1 2是一株分离自粤北一种虫草的无孢丝状真菌 ,经培养初步鉴定为无孢菌目(^{Agonomycetales})的丝核菌属 (^Rhizoctonia)。对包括革兰氏阳性及阴性细菌、放线菌、丝状真菌和酵母菌在内的 2 6株致敏菌株的抗性测定表明 ,CR 95 1 2对包括红酵母属 (^Rhodotorula)、酵母属 (^{Saccharomyces})、毕赤氏酵母属 (Pichia)和隐球酵母属 (^Cryptoc     

Geotrichum sp．SYBC WU-3脂肪酶的双水相萃取和酶学性质

初步研究双水相体系对Geotrichum sp．SYBC WU-3脂肪酶的萃取分离效果,选用PEC4000／NaH2 PO4作为戍相系统进行系统研究,考察影响脂肪酶萃取的各种因素（如PEG相对分子质量及质量分数、NaH2PO4质量浓度、pH）,并采用正交实验进一步优化实验条件,确定双水相萃取体系为PEG质量分数为30％、NaH2PO4质量分数为20％、体系pH为6,在此条件下Geotrichum sp．SYBC WU-3脂肪酶经硫酸铵沉淀和双水相萃取两步纯化的纯化倍数达到最大,较Geotrichum sp．SYBC WU-3脂肪酶粗酶纯化了22倍。Geotrichum sp．SYBC WU-3脂肪酶纯酶为低温碱性脂肪酶,最适反应温度为15oC,最适pH为9．5,相对分子质量为3．58×10^4。     

Emission of isoprenoids from natural vegetation in the Beijing region (Northern China)

ABSTRACT

A survey was conducted to identify plants emitting isoprenoids in the Beijing area which could potentially contribute to smog episodes when combined with anthropogenic pollutants. The emission pattern was similar to that observed in the previously surveyed boreal ecosystems (Europe, North America). Most deciduous oaks are strong isoprene emitters; however, some of them do not emit isoprenoids and are therefore more suitable for the urban environment of Beijing. No emission of monoterpenes was found in Chinese oaks, and this trait seems therefore confined to the Mediterranean environment. The emission of isoprene was found in poplars and in some of the bamboo widespread in city parks and in the riparial vegetation surrounding the city. Chinese pine species emit monoterpenes when wounded, and the emission is not qualitatively different among species. Pinus tabulaeformis, one of the most important trees in China, is a low emitter compared to other pine species.     

细胞周期蛋白依赖性激酶抑制剂Roscovitine对3种蓝藻生长和活性的影响

为了明确蓝藻中丝氨酸/苏氨酸激酶的功能是否与调控细胞的生长分裂相关,以丝状鱼腥藻7120、单细胞集胞藻6803和聚球藻7002为对象,利用OD750光吸收测定和MTT方法研究了不同浓度丝氨酸苏氨酸激酶抑制剂roscovitine对其生长和脱氢酶活性的影响。结果表明:4 h roscovitine处理后对鱼腥藻7120和集胞藻6803生长量影响不大,对聚球藻7002的生长有促进作用。4 h roscovitine的处理对鱼腥藻7120有浓度依赖的显著抑制活性,对集胞藻6803的活性无影响,但是却促进聚球藻7002的活性。药物作用4 d后,7120的生长和活性均显著降低,并有浓度效应;6803的生长量较对照减少,但活性变化不明显;聚球藻7002的生长和活性均未受影响。显微观察结果显示,roscovitine对3种细胞形态没有影响,但药物作用4 d后的7120藻丝体较短。结果表明丝氨酸/苏氨酸抑制剂roscovitine影响丝状藻7120的生长和活性。     

抑氨菌筛选鉴定、培养条件优化及在鸡粪除臭中的应用

目的筛选能抑制鸡粪中恶臭气体NH3释放的亚硝化、硝化细菌菌株。方法以亚硝化、硝化细菌培养基为筛选培养基筛选菌株,然后将菌株分别以10%(v/m,下同)的接种量接种到鸡粪中,测定其对鸡粪中NH3释放量的影响,从中筛选出可减少NH3释放的菌株。根据菌株的形态特征和16S rDNA序列分析对其进行鉴定。通过自动发酵系统对菌株培养温度、pH、通气量及转速四个因素进行正交优化。结果通过筛选得到两株细菌YF1和YS2,经鉴定分别为假单胞菌属(Pseudomonas sp.)和中华根瘤菌属(Sinorhizobium sp.)。菌株YF1最适培养条件为温度28℃,pH 7.0,通气量5 L/min,转速200 r/min;菌株YS2最适培养条件为温度30℃,pH6.5,通气量5 L/min,转速300 r/min。温度、pH、接种量和通气量对YF1、YS2影响均极显著(P0.01)。YF1和YS2单独按10%剂量接种分别使鸡粪中NH3的释放量降低26.0%和28.4%,而两菌1∶1混合接种可使NH3释放量降低75.6%。结论 YF1和YS2是抑制鸡粪中NH3释放的优良菌株。     

Time-resolved fluorimetry in the study of attachment of staphylococci and streptococci on substrate-bound fibronectin

Abstract The application of time-resolved fluorimetry was evaluated in the study of staphylococcal and streptococcal attachment to fibronectin-coated coverslips. The test system allowed the use of low bacterial concentrations (2 × 10⁵−10⁷ bacteria per ml), in contrast to the much higher concentrations of bacteria used in earlier assays. The bacteria attached much better to fibronectin-coated plastic surfaces than to albumin-coated ones, but there were differences between the individual strains. Soluble fibronectin inhibited the adsorption of staphylococci but enhanced streptococcal attachment to fibronectin-coated surfaces. Purified antibodies to fibronectin inhibited both staphylococcal and streptococcal adhesion in a dose-dependent way. Our results show that time-resolved fluorimetry is a very sensitive method for quantitating bacterial attachment.