Testate amoebae response and vegetation composition after plantation removal on a former raised bog

Extensive drainage of peatlands in north-west Europe for the purposes of afforestation for timber production and harvesting has altered the carbon balance and biodiversity value. Large-scale restoration projects aim to reinstate hydrological conditions to keep carbon locked up in the peat and to restart active peat growth. Testate amoebae are an informal grouping of well-studied protists in peatland environments and as microbial consumers play an important role in nutrient and carbon cycling. Using a space for time substitution approach, this study investigated the response of testate amoebae assemblages and vegetation composition after tree removal on a drained raised bog. There was a clear difference in microbial assemblages between open and a chronosequence of restoration areas. Results suggest microbial recovery after rewetting is a slow process with plant composition showing a faster response than the microbial assemblage. Mixotrophic testate amoebae had not recovered seventeen years following plantation removal and the establishment of Sphagnum mosses in the wetter microforms. These results suggest that vegetation composition and Testate amoeba assemblages respond differently to environmental drivers at forest-to-bog restoration areas. Local physicochemical peat properties were a stronger driver of the testate assemblage compared with vegetation. Complete recovery of microbial assemblages may take place over decadal timescales.     

Seasonal Influences on the Ecology of Testate Amoebae (Protozoa) in a Small <Emphasis Type="Italic">Sphagnum</Emphasis> peatland in Southern Ontario,Canada

Testate amoebae (Protozoa) were studied in spring, summer, and fall from the same microhabitats in a small Sphagnum-dominated peatland in southern Ontario, Canada. A total of 32 sampling stations were established in two wetland plant communities, 19 in an open Ericaceae low-shrub community and 13 in a closed Picea mariana and Larix laricina swamp community. Sphagnum was collected in each station for analysis of testate amoebae and measurement of soil water content parameters and water table depth in May, August, and October 2001. pH and dissolved oxygen of the groundwater under the Sphagnum were measured also. A total of 52 taxa including the rotifer, Habrotrocha angusticollis, were identified. Soil water content and water table variables emerged as the primary factors separating testate amoebae between the open bog/fen community and swamp community. Testate amoebae in the open bog/fen community showed a clear separation between the May sampling period and the August and October sampling periods. Sampling stations in May had much higher water table and were wetter than those in August and October. Conversely, testate amoebae in the swamp community did not show a clear difference between sampling periods. Soil moisture and water tables appear to be more constant in the swamp communities. Biological factors or other microscale environmental factors may need to be considered to explain seasonal changes in testate amoebae. A greater understanding of relationships between testate amoebae and microenvironmental factors is necessary to track seasonality in testate amoebae distributions.     

Structural and Functional Changes with Depth in Microbial Communities in a Tropical Malaysian Peat Swamp Forest

Tropical peat swamp forests are important and endangered ecosystems, although little is known of their microbial diversity and ecology. We used molecular and enzymatic techniques to examine patterns in prokaryotic community structure and overall microbial activity at 0-, 10-, 20-, and 50-cm depths in sediments in a peat swamp forest in Malaysia. Denaturing gradient gel electrophoresis profiles of amplified 16S ribosomal ribonucleic acid (rRNA) gene fragments showed that different depths harbored different bacterial assemblages and that Archaea appeared to be limited to the deeper samples. Cloning and sequencing of longer 16S rRNA gene fragments suggested reduced microbial diversity in the deeper samples compared to the surface. Bacterial clone libraries were largely dominated by ribotypes affiliated with the Acidobacteria, which accounted for at least 27–54% of the sequences obtained. All of the sequenced representatives from the archaeal clone libraries were Crenarchaeota. Activities of microbial extracellular enzymes involved in carbon, nitrogen, and phosphorus cycling declined appreciably with depth, the only exception being peroxidase. These results show that tropical peat swamp forests are unusual systems with microbial assemblages dominated by members of the Acidobacteria and Crenarchaeota. Microbial communities show clear changes with depth, and most microbial activity is likely confined to populations in the upper few centimeters, the site of new leaf litter fall, rather than the deeper, older, peat layers.     

Influence of Environmental Heterogeneity on the Structure of Testate Amoebae (Protozoa,Rhizopoda) Assemblages in the Plankton of the Upper Paraná River Floodplain,Brazil

In freshwater environments, testate amoebae are usually found associated with macrophytes and sediments and many studies have suggested that their occurrence in plankton samples is accidental. This implies that predictable patterns detected in planktonic assemblages should not be observed in testate amoebae assemblages. This hypothesis was tested in this study. Plankton samples were collected from different environments in the Upper Paraná River floodplain. Results show that patterns in species composition and abundance of testate amoebae are predictable, and that dominant species tend to present characteristic shell morphology in hydrologically different environments. We suggest that testate amoebae must be routinely included in plankton ecology studies, at least in floodplain environments.     

Logged peat swamp forest supports greater macrofungal biodiversity than large‐scale oil palm plantations and smallholdings

Intensive land expansion of commercial oil palm agricultural lands results in reducing the size of peat swamp forests, particularly in Southeast Asia. The effect of this land conversion on macrofungal biodiversity is, however, understudied. We quantified macrofungal biodiversity by identifying mushroom sporocarps throughout four different habitats; logged peat swamp forest, large‐scale oil palm plantation, monoculture, and polyculture smallholdings. We recorded a total of 757 clusters of macrofungi belonging to 127 morphospecies and found that substrates for growing macrofungi were abundant in peat swamp forest; hence, morphospecies richness and macrofungal clusters were significantly greater in logged peat swamp forest than converted oil palm agriculture lands. Environmental factors that influence macrofungi in logged peat swamp forests such as air temperature, humidity, wind speed, soil pH, and soil moisture were different from those in oil palm plantations and smallholdings. We conclude that peat swamp forests are irreplaceable with respect to macrofungal biodiversity. They host much greater macrofungal biodiversity than any of the oil palm agricultural lands. It is imperative that further expansion of oil palm plantation into remaining peat swamp forests should be prohibited in palm oil producing countries. These results imply that macrofungal distribution reflects changes in microclimate between habitats and reduced macrofungal biodiversity may adversely affect decomposition in human‐modified landscapes.     

Low conservation value of converted habitat for avifauna in tropical peatland on Sumatra,Indonesia

Peat swamp forest is an important refuge for biodiversity in Southeast Asia and is now becoming a target of exploitation. The scarcity of information on avifauna and ecology of birds in peat swamp forests prevents understanding of the effects of land use change on avifauna. In this study, we describe the bird assemblages in habitats with different land uses by comparing species richness, community composition, and feeding guild patterns in Bukit Batu, Indonesia. Bird assemblages in natural peat swamp forests (NPF), high-maintenance industrial acacia plantations (planted acacia forest, PAF), low-maintenance rubber plantations (jungle rubber forest, JRF), and village areas (VIL) were studied using a fixed-radius point-count method. Of the 95 species observed, 45, 20, 35, and 48 species were observed in NPF, PAF, JRF, and VIL, respectively. Estimated species richness was the highest in NPF, followed by VIL, JRF, and PAF. NPF had the highest species diversity and β-diversity, more endangered species, and a distinctive species composition characterized by fly-catching insectivores. The relative conservation value of PAF was notably low, particularly compared with JRF. The avifauna in VIL was characterized by more generalists that favor open spaces and therefore is not considered an important habitat for forest-dependent birds that are of conservation concern. Our results indicate that NPF has irreplaceable value for bird diversity conservation, but low-maintenance rubber plantations were home to several forest-dependent species and partially supported bird diversity, particularly compared with high-maintenance acacia plantations.     

Fish Assemblages and Habitat in a Malaysian Blackwater Peat Swamp

Fish captured by electrofishing from lotic reaches within and immediately outside the North Selangor blackwater peat swamp forest were placed into six assemblages. Species richness varied among assemblages from 7 to 32 but most species were not regular members of an assemblage. Swamp water was low in dissolved oxygen and buffering capacity and high in color and acidity. Assemblages were associated with four discrete aggregations of abiotic conditions including oxygen, pH, color, conductivity and organic content of the substrate. Assemblages relatively rich in species and numerical abundance were associated with habitats comparatively high in oxygen and color and low in acidity. Species-poor assemblages were associated with habitats particularly low in oxygen and high in acidity.     

Palaeoecology of testate amoebae in a tropical peatland

We present the first detailed analysis of subfossil testate amoebae from a tropical peatland. Testate amoebae were analysed in a 4-m peat core from western Amazonia (Peru) and a transfer function developed from the site was applied to reconstruct changes in water table over the past ca. 8,000 years. Testate amoebae were in very low abundance in the core, especially in the lower 125 cm, due to a combination of poor preservation and obscuration by other organic matter. A modified preparation method enabled at least 50 testate amoebae to be counted in each core sample. The most abundant taxa preserved include Centropyxis aculeata, Hyalosphenia subflava, Phryganella acropodia and Trigonopyxis arcula. Centropyxis aculeata, an unambiguous wet indicator, is variably present and indicates several phases of near-surface water table. Our work shows that even degraded, low-abundance assemblages of testate amoebae can provide useful information regarding the long-term ecohydrological developmental history of tropical peatlands.     

Flourish or Flush: Effects of Simulated Extreme Rainfall Events on Sphagnum-dwelling Testate Amoebae in a Subarctic Bog (Abisko, Sweden)

Extreme precipitation events are recognised as important drivers of ecosystem responses to climate change and can considerably affect high-latitude ombrotrophic bogs. Therefore, understanding the relationships between increased rainfall and the biotic components of these ecosystems is necessary for an estimation of climate change impacts. We studied overall effects of increased magnitude, intensity and frequency of rainfall on assemblages of Sphagnum-dwelling testate amoebae in a field climate manipulation experiment located in a relatively dry subarctic bog (Abisko, Sweden). The effects of the treatment were estimated using abundance, species diversity and structure of living and empty shell assemblages of testate amoebae in living and decaying layers of Sphagnum. Our results show that increased rainfall reduced the mean abundance and species richness of living testate amoebae. Besides, the treatment affected species structure of both living and empty shell assemblages, reducing proportions of hydrophilous species. The effects are counterintuitive as increased precipitation-related substrate moisture was expected to have opposite effects on testate amoeba assemblages in relatively dry biotopes. Therefore, we conclude that other rainfall-related factors such as increased infiltration rates and frequency of environmental disturbances can also affect testate amoeba assemblages in Sphagnum and that hydrophilous species are particularly sensitive to variation in these environmental variables.     

Adaptive significance of vegetative sprouting for a tropical canopy tree, Scaphium longiflorum (Sterculiaceae), in a peat swamp forest in Central Kalimantan

Scaphium longiflorum Ridley (Sterculiaceae), a common canopy tree in peat swamp forests in the Far East, produces vegetative sprouting in its juvenile stage. We investigated morphological features and allometric properties of the species in a peat swamp forest in Central Kalimantan, Indonesia, to determine under what conditions ramets are produced and discuss the adaptive significance of the vegetative sprouting in a peat swamp environment. Larger juveniles were more toppled, and the toppled ones sprouted vegetatively. Therefore, the vegetative sprouting acts as a countermeasure for a shoots mechanical failure and fall on an unstable peat soil. We propose three hypotheses to explain the reason why larger juveniles are more often toppled in a peat swamp environment.     

Evaluating the use of dominant microbial consumers (testate amoebae) as indicators of blanket peatland restoration

Peatlands represent globally-important ecosystems and carbon stores. However, large areas of peatland have been drained for agriculture, or peat has been harvested for use as fuel or in horticulture. Increasingly, these landscapes are being restored through ditch blocking and rewetting primarily to improve biodiversity and promote peat accumulation. To date we have little knowledge of how these interventions influence the microbial communities in peatlands. We compared the responses of dominant microbial consumers (testate amoebae) to drainage ditch restoration relative to unblocked ditches in a UK upland blanket peatland (Migneint, North Wales). Two techniques were used for restoration: (i) dammed ditches with re-profiling; and (ii) dammed ditches with pools of open water behind each dam. Testate communities in the inter-ditch areas changed markedly over time and between treatments illustrating the potential of this group of organisms as indicators of blanket peatland restoration status. However, the responses of testate amoebae to peat rewetting associated with restoration were partially obscured by inter-annual variability in weather conditions through the course of the experiment. Although there was considerable variability in the response of testate amoebae communities to peatland drain blocking, there were clearly more pronounced changes in samples from the dammed and reprofiled treatments including an increase in diversity, and the appearance of unambiguous wet-indicator species in relatively high abundances (including Amphitrema stenostoma, Archerella flavum, Arcella discoides type, Difflugia bacillifera and Difflugia bacillarium). This reflects a shift towards overall wetter conditions across the site and the creation of new habitats. However, water-table was not a significant control on testate amoebae in this case, suggesting a poor relationship between water table and surface moisture in this sloping blanket peatland. Our findings highlight the potential of testate amoebae as bioindicators of peatland restoration success; however, there is a need for caution as mechanisms driving change in the microbial communities may be more complex than first assumed. Several factors need to be taken into account when implementing biomonitoring studies in peatlands including: (i) the natural variability of the peatland ecosystem under changing weather conditions; (ii) any disturbance connected with the restoration procedures; and (iii) the timescales over which the ecosystem responds to the management intervention. Our results also suggest an indicator species approach based on population dynamics may be more appropriate for biomonitoring peatland restoration than examining changes at the community level.     

Contribution to the knowledge of Thai microfauna diversity: notes on rare peat swamp Rotifera, with the description of a new Lecane Nitzsch, 1872

During an ongoing study of the rotifer diversity in Thai peat swamps, several new or rare species were found. We here report on one new species, Lecane kunthuleensis n.sp., from a canal in Kun Thu Lee peat swamp, and on three rare species: Paracolurella aemula (Myers, 1934) and Lecane junkiKoste, 1975 from Kra Jood peat swamp (Suratthanee province), and Lepadella punctataWulfert, 1939 from To-Daeng peat swamp (Narathiwas province).     

Ectomycorrhizal fungi promote growth of <Emphasis Type="Italic">Shorea balangeran</Emphasis> in degraded peat swamp forests

Shorea balangeran is an important component of peat swamp forests in Southeast Asia and is an important source of timber. However, S. balangeran has been decreasing in number due to overexploitation. The objective of this study was to investigate the effect of inoculation of native ectomycorrhizal (ECM) fungi on growth of S. balangeran in degraded peat swamp forest. Spores of Boletus sp., Scleroderma sp., and Strobilomyces sp. were collected from natural peat swamp forest in Indonesia. Seedlings of S. balangeran were inoculated with or without (control) spores and grown in sterilized peat soil under nursery conditions for 6 months. Then, the seedlings were transplanted into a degraded peat swamp forest and grown for 40 months. ECM colonization was 59–67% under nursery conditions and increased shoot height and weight. Shoot height, stem diameter, and survival rates were higher in inoculated seedlings than in control 40 months after transplantation. The results suggest that inoculation of native ECM fungi onto native tree species is useful for reforestation of degraded peat swamp forests.     

Diversity and conservation of blackwater fishes in Peninsular Malaysia,particularly in the North Selangor peat swamp forest

One of the most extreme freshwater habitats in Peninsular Malaysia is the peat swamp forest, with dark-coloured and highly acidic waters. Surprisingly, little is known about blackwater fishes in Peninsular Malaysia. Until 1968, only 26 fish species were known from blackwaters throughout Peninsular Malaysia, of which only one can be regarded as stenotopic. A recent intensive survey of part of the North Selangor peat swamp forest yielded 47 species, of which 14 are probably stenotopic taxa. These include four undescribed species and several new records for western Peninsular Malaysia. These discoveries are significant in that they include the family Chaudhuriidae which until 1985, was not reported from Sundaic Southeast Asia, and the rare genus Encheloclarias which had not been encountered for over 50 years. The rapid rate of destruction of the peat swamp forest owing to development, forestry and agricultural activities must be halted or slowed significantly to enable the proper zoological surveys and studies to be conducted. Conservation plans and environmental impact assessments based on inadequate sampling and knowledge of species present is acutely dangerous. There are no longer substantial undisturbed blackwater peat swamp forests left in most of Peninsular Malaysia. Conservation of the remaining blackwater biotopes is critically important if extinction of many species, here regarded as economically valuable renewable resources, is to be prevented.     

Testate amoebae community analysis as a tool to assess biological impacts of peatland use

As most ecosystems, peatlands have been heavily exploited for different human purposes. For example, in Finland the majority is under forestry, agriculture or peat mining use. Peatlands play an important role in carbon storage, water cycle, and are a unique habitat for rare organisms. Such properties highlight their environmental importance and the need for their restoration. To monitor the success of peatland restoration sensitive indicators are needed. Here we test whether testate amoebae can be used as a reliable bioindicator for assessing peatland condition. To qualify as reliable indicators, responses in testate amoebae community structure to ecological changes must be stronger than random spatial and temporal variation. In this study, we simultaneously assessed differences between the effects of seasonality, intermediate scale spatial variation and land uses on living testate amoebae assemblages in natural, forested and restored peatlands. We expected the effects of seasonality on testate amoebae communities to be less pronounced than those of land use and within site variation. On average, natural sites harboured the highest richness and density, while the lowest numbers were found at forestry sites. Despite small changes observed in taxa dominance and differences in TA community structure between seasons and years at some sites, spatial heterogeneity, temperature, pH, nor water table depth seemed to significantly affect testate amoebae communities. Instead, observed differences were related to type of land use, which explained 75% of the community variation. Our results showed that testate amoebae community monitoring is a useful tool to evaluate impacts of human land use on boreal peatlands.     

Diversity of desmids in three Thai peat swamps

Three peat swamps situated in the southern part of Thailand were investigated for their desmid flora in relation to a number of physical and chemical habitat parameters. Altogether, 99 species were encountered belonging to 22 genera. 30 species are new records for the Thai desmid flora. Laempagarung peat swamp showed the highest diversity (45 species), followed by Maikhao peat swamp (32 species) and Jud peat swamp (25 species). Despite its relatively low species richness, Jud swamp appeared to house a number of rare taxa, e.g., Micrasterias subdenticulata var. ornata, M. suboblonga var. tecta and M. tetraptera var. siamensis which can be considered Indo-Malaysian endemics. Differences in composition of the desmid flora between the three peat swamps are discussed in relation to environmental conditions. Presented at the International Symposium Biology and Taxonomy of Green Algae V, Smolenice, June 26–29, 2007, Slovakia.     

内蒙古乌达煤田下二叠统山西组4,5号煤层底板植物群研究北大核心CSCD

基于对内蒙古乌达煤田下二叠统山西组4,5号煤层底板的野外工作,系统采集、鉴定植物化石18属26种,其中以华夏植物群的特有属种或常见分子占绝对优势。沉积环境及植物古生态学分析表明,5号煤底板植物群主要由Lepidodendron posthumii Jongm. and Goth.和Cathaysiodendron cf.incertum(Sze and Lee) Lee等组成,代表了三角洲平原上碎屑沼泽植被景观。4号煤底板植物群主要由成煤沼泽植物和碎屑沼泽植物混合而成,原位埋藏的Stigmaria ficoides(Sternb.) Brongn.为成煤沼泽植被类群,代表了上覆4号煤的成煤植物;由Tingia carbonica(Schenk) Halle和Pecopteris arborescens(Schloth.) Sternb.等组成的碎屑沼泽植被类群,代表了三角洲平原上的碎屑沼泽植被景观。综合相关研究资料和当前植物化石分析表明,煤层底板植物群主要代表了地质历史时期中的湿地植被,按照其与形成上覆煤层植物之间的关系可主要分为:上覆煤层形成初期的泥炭沼泽植物群、与成煤作用无关的碎屑沼泽植物群和两者的混合类型。底板植物群的深入研究必须要结合沉积岩石学、地层学以及埋藏学的分析。当前研究显示乌达地区早二叠世沉积时期,湿地植被组成较为稳定,其中石松类植物一直都是重要的成煤泥炭沼泽植被类型;碎屑沼泽植被与成煤沼泽植被多数情况下成分类似,仅存在种一级别的差异。     

增温对冻土区泥炭沼泽土壤孔隙水甲烷关联微生物和溶解性有机碳的影响

多年冻土区泥炭沼泽土壤孔隙水甲烷关联微生物及底物的研究有助于深入理解气候变化背景下寒区湿地生态系统甲烷循环过程。选取大兴安岭连续多年冻土区柴桦-泥炭藓和狭叶杜香-泥炭藓两种典型植被群落泥炭沼泽,设置开顶箱(Open Top Chamber,OTC)增温实验。于生长季(6月、7月、8月和9月)采集土壤孔隙水样品,对比分析OTC内外土壤孔隙水中产甲烷菌数量、甲烷氧化菌数量及溶解性有机碳(Dissolved Organic Carbon,DOC)浓度的动态变化特征,并探究土壤孔隙水甲烷关联微生物与DOC浓度的关系。结果表明:增温提高了生长季大兴安岭多年冻土区土壤孔隙水中产甲烷菌数量和DOC浓度,而对甲烷氧化菌数量的影响因月份而异。生长季柴桦-泥炭藓和狭叶杜香-泥炭藓泥炭沼泽土壤孔隙水中产甲烷菌数量的平均增加幅度分别为54.52%和44.97%,DOC浓度的平均增加幅度分别为34.16%和28.33%。增温使得生长季柴桦-泥炭藓和狭叶杜香-泥炭藓泥炭沼泽土壤孔隙水中甲烷氧化菌平均数量分别降低了46.20%和31.42%。一元线性回归分析结果表明,土壤孔隙水中DOC浓度可分别解释柴桦-泥炭藓和狭叶杜香-泥炭藓泥炭沼泽土壤孔隙水中产甲烷菌数量变化的29.00%和24.10%(P<0.01),而对两种植被群落下土壤孔隙水中甲烷氧化菌数量的影响并不显著(P>0.05)。     

Interdependence of peat and vegetation in a tropical peat swamp forest

The visual uniformity of tropical peat swamp forest masks the considerable variation in forest structure that has evolved in response to differences and changes in peat characteristics over many millennia. Details are presented of forest structure and tree composition of the principal peat swamp forest types in the upper catchment of Sungai Sebangau, Central Kalimantan, Indonesia, in relation to thickness and hydrology of the peat. Consideration is given to data on peat geochemistry and age of peat that provide evidence of the ombrotrophic nature of this vast peatland and its mode of formation. The future sustainability of this ecosystem is predicted from information available on climate change and human impact in this region.     

Effect of vegetation cover on the abundance and diversity of ladybirds (Coccinellidae) assemblages in a peat bog

Predaceous ladybirds are important natural enemies of many insect pests in terrestrial ecosystems such as peatlands, which are habitats for specialized cold-adapted plants. Ladybird assemblages of pristine peat bogs have not yet been assessed. In total, 15 ladybird species were recorded in peat bog in Belarus by using entomological sweep net. The present study shows low diversity, evenness and species richness of ladybird assemblages. However, a small number of species were present in high numbers. These are Coccinella hieroglyphica, Chilocorus bipustulatus, Coccinulla qutuordecimpustulata and Hippodamia tredecimpunctata. Ladybird abundance was positively related to shrub cover and number of vascular plant species, and negatively related to herb cover. In terms of ladybird diversity, only shrub cover had a significant negative effect.