Nutrients and Primary Production in the Estuary of the Razdol’naya River (Amur Bay,Sea of Japan)

The behavior of the basic nutrients (NO₃, PO₄, SiO₂) was studied in the estuary of the Razdolnaya River in low and high water, the flow was 4.3 × 10⁶ m³/day and 10.8 × 10⁶ m³/day, respectively. It was shown that within the limits of the euphotic zone the nutrients were characterized by a pronounced nonconservative behavior caused by their removal by phytoplankton in primary production. It was determined that phytoplankton removal of nutrients occurred with ratios C : NO₃ : P : Si = 105 : 18 : 1 : 37 and C : NO₃ : P : Si = 93 : 11 : 1 : 29 at a respective ratio P : NO₃ : Si = 1 : 22 : 140 in low water and P : NO₃ : Si = 1 : 17 : 120 in high water. It was also determined that the maximum rate of nutrient removal was 4 times higher in the high water than in the low water. The maximum value of primary production of phytoplankton was 2.5–4.0 gC/m² day. The estuary area of the Razdolnaya River was specified by rather high production. Such a rate of estuarine primary production, caused by nutrients carried out by the river, being no less than 250 t of dry weight of phytoplankton a day, can provide daily production up to 800 t of biomass in the secondary chain of the ecosystem.Original Russian Text Copyright © 2005 by Biologiya Morya, Zvalinsky, Nedashkovsky, Sagalayev, Tishchenko, Shvetsova.     

Distribution and seasonal changes in fish abundance in the estuary of the Razdol’naya River (Peter the Great Bay), Sea of Japan

The distribution and seasonal dynamics of fish abundance in the estuary of the Razdol’naya River (Peter the Great Bay) depending on several abiotic factors are considered. It is established that fish biomass increases with an increase in salinity and decrease in water temperature (both in space and time). Freshwater stenohaline species dominate in the upper part of the estuary, semianadromous and freshwater euryhaline species dominate in the middle part, and semianadromous and marine species dominate in the lower part. The seasonal succession of ichthyocenosis includes two periods: warm (May–October) and cold (November–April). The warm period is characterized by a low biomass (4–10 g/m²) and maximum species richness (22–29 species) against the background of a decrease of the penetration into the estuary of high-saline waters and an increase in the water discharge, turbidity, and temperature. Freshwater species dominate in catches, and subtropical migrants appear. In the cold period, species richness is minimal (2–12 species), and biomass is, on the contrary, very high (on average, 71–374 g/m²); water temperature and discharge are minimal. In catches, the proportion of semianadromous and marine species is maximum.     

A “Bloom” in the Water of Amursky Bay (Sea of Japan) Caused by the Dinoflagellate Oxyrrhis marina Dujardin, 1841

A bloom in the water of Amursky Bay (Sea of Japan) caused by the dinoflagellate Oxyrrhis marina Dujardin, 1841 was recorded for the first time. The highest density of this species in the bloom area was 443.3 million cells/liter. The abundant development of microalga was observed from July to September 2002 at a water temperature of 17–24.5°C and a salinity of 7–18. Changes in the density of O. marina and other species of phytoplankton during the bloom period are analyzed. Possible reasons for the blooms of O. marina in Amursky Bay are discussed.     

Effects of 17-α-estradiol on a free-living marine nematode community: a microcosm experiment

A microcosm experiment was used to examine the effects of 17-α-estradiol on a nematode community. Four 17-α-estradiol concentrations (0.15, 0.31, 0.62 and 1.24 ppm) were tested, and effects were examined after 30 days. Significant differences were noted between nematode assemblages from the control and those from 17-α-estradiol treatments. Total nematode abundance, Shannon–Wiener index and evenness were affected by 17-α-estradiol contamination, but species richness was unaffected. Chromadorina metulata and Ascolaimus elongatus were eliminated at all doses tested and seemed to be intolerant to estradiol. Kraspedonema octogoniata decreased at all doses and could be categorised as sensitive to estradiol contamination. Spirinia gerlachi increased at all doses tested and seemed to be an opportunistic species at the doses tested.     

Effect of hybridization of the Quercus crassifolia×Quercus crassipes complex on the community structure of endophagous insects

In a previous study, we showed that the geographic proximity of hybrid plants to the allopatric areas of parental species increases their morphological and genetic similarity with them. In the present work, we explored whether the endophagous fauna of hybrid plants show the same pattern. We studied the canopy species richness, diversity and composition of leaf-mining moths (Lepidoptera: Tischeridae, Citheraniidae) and gall-forming wasps (Hymenoptera: Cynipidae) associated with two species of red oaks (Quercus crassifolia and Quercus crassipes) and their interspecific hybrid (Quercus×dysophylla Benth pro sp.) in seven hybrid zones in central Mexico, during four seasons in 2 years. The study was conducted on 194 oak trees with known genetic status [identified by leaf morphology and molecular markers (random amplified polymorphic DNAs)], and the results indicate a bidirectional pattern of gene flow. Hybrid plants supported intermediate levels of infestation of gall-forming and leaf-mining insects compared to their putative parental species. The infestation level of leaf-mining insects varied significantly following the pattern: Q. crassifolia>hybrids>Q. crassipes, whereas the gall-forming insects showed an inverse pattern. A negative and significant relationship was found between these two types of insect guilds in each host taxa, when the infestation percentage was evaluated. It was found that 31.5% (n=11) of the endophagous insects were specific to Q. crassipes, 22.9% (n=8) to Q. crassifolia, and 8.6% (n=3) to hybrid individuals. The hybrid bridge hypothesis was supported in the case of 25.7% (n=9) of insects, which suggests that the presence of a hybrid intermediary plant may favor a host herbivore shift from one plant species to another. Greater genetic diversity in a hybrid zone is associated with greater diversity in the endophagous community. The geographic proximity of hybrid plants to the allopatric site of a parental species increases their similarity in terms of endophagous insects and the Eje Neovolcánico acts as a corridor favoring this pattern. Electronic Supplementary Material Supplementary material is available for this article at     

The structure of the plankton community of the Öregrundsgrepen (southwest Bothnian Sea)

Taxonomic composition and variations in density and biomass of the plankton community in the Öregrundsgrepen, a shallow coastal area, were investigated from June 1972 to November 1973. The phytoplankton biomass was large in spring but small during the rest of the year. The spring bloom was dominated by diatoms and dinoflagellates, especially byThalassiosira spp. which were also important during other seasons. Small forms, such asCryptomonas spp.,Rhodomonas spp. and monads, dominated during summer. Blue-green algae were never of any major importance. During the summer, the trophogenic layer exceeded 10 m in thickness. The metazoan fauna was of lower diversity than the plankton flora. The dominating species, the copepodsAcartia bifilosa andEurytemora affinis, constituted on the average 83% of the standing crop. The low salinities, 5–6 S, were regarded as the principal pertinent limiting factor. The metazoan fauna reached large biomass values from July to October. The protozoan fauna (in the case of ciliates), obtained biomass maxima during the spring bloom. It is suggested that the Öregrundsgrepen represents an area of elevated productivity within a region of low overall production, presumably due to local upwelling. From June 1972 to May 1973, the average biomasses were: phytoplankton 0.464 g C m^–2, ciliates 0.040 g C m^–2, copepod nauplii 0.010 g C m^–2, micro-rotifers 0.004 g C m^–2, and mesozooplankton (larger than 0.2 mm) 0.312 g C m^–2. It is estimated that about than 60% of the phytoplankton production is consumed by the microzooplankton (<0.2 mm).     

Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Rømø Basin, Wadden Sea

Molecular biological methods were used to investigate the microbial diversity and community structure in intertidal sandy sediments near the island of Sylt (Wadden Sea) at a site which was characterized for transport and mineralization rates in a parallel study (D. de Beer, F. Wenzhöfer, T. Ferdelman, S.E. Boehme, M. Huettel, J.E.E. van Beusekom, M.E. Böttcher, N. Musat, N. Dubilier, Transport and mineralization rates in North Sea sandy intertidal sediments, Sylt-Romo Basin, Wadden Sea, Limnol. Oceanogr. 50 (2005) 113–127). Comparative 16S rRNA sequence analysis revealed a high bacterial diversity. Most sequences retrieved by PCR with a general bacterial primer set were affiliated with Bacteroidetes, Gammaproteobacteria, Deltaproteobacteria and the Pirellula cluster of Planctomycetales. Fluorescence in situ hybridization (FISH) and slot-blot hybridization with group-specific rRNA-targeted oligonucleotide probes were used to characterize the microbial community structure over depth (0–12 cm) and seasons (March, July, October). We found high abundances of bacteria with total cell numbers up to 3×10⁹ cells ml⁻¹ and a clear seasonal variation, with higher values in July and October versus March. The microbial community was dominated by members of the Planctomycetes, the Cytophaga/Flavobacterium group, Gammaproteobacteria, and bacteria of the Desulfosarcina/Desulfococcus group. The high abundance (1.5×10⁷–1.8×10⁸ cells ml⁻¹ accounting for 3–19% of all cells) of presumably aerobic heterotrophic polymer-degrading planctomycetes is in line with the high permeability, deep oxygen penetration, and the high rates of aerobic mineralization of algal biomass measured in the sandy sediments by de Beer et al. (2005). The high and stable abundance of members of the Desulfosarcina/Desulfococcus group, both over depth and season, suggests that these bacteria may play a more important role than previously assumed based on low sulfate reduction rates in parallel cores (de Beer et al., 2005).     

Effect of γ-hexachloran and sevin on the survival of the Black Sea mussel,Mytilus galloprovincialis Lam

Some observations on the effect of -hexachloran and sevin on the survival of two size groups of the Black Sea mussel, Mytilus galloprovincialis Lam. were made. The results of the present study are compared with those made earlier on the same species and on fishes.     

Effect of ConA—receptor interaction on the structure of cell membrane

Recently,the effect of ligand receptor interaction on the membrane structure of liposomes has been studied extensively,However,little is known about how it exists on biological membranes,In this paper,the effect of Concanavalin A(ConA) receptorinteratcion on the structure of cell membranes was studied by Circular DIchrosim(CD) and 31P Nuclear Magnetic Resonance(NMR).CD results of both the purified macrophage membranes and human erythrocyte hgosts(EG) showed that the conformation of membrane proteins changed after ConA binding.For further research,31P-NMR was used to detect the orgainzation of phosp[holipid molecules on macrophage membranes.After ConA binding,the tendercy to form non bilayer structure increased with the amount of ConA.The changes of 31P-NMR spectra of living macrophages might be partly due to the above stated reason too.In addition,ConA-receptor interaction also induced similar results of 31P-NMR spectra in EG.In contrast,wheat germ agglutinin (WGA),another kind of lectin,rarely showed the same influence.     

Effect of phenobarbital on the oligosaccharide structure of rat α-acid glycoprotein

We have recently shown that the administration of phenobarbital to rats leads t an increased serum α₁-acid glycoprotein content with alterations in the relative proportion of the sugar moiety. Therefore, α₁-acid glycoprotein was purified from normal (α₁-acid glycoprotein_N) and phenobarbital-treated rats (α₁-acid glycoprotein_PB). Glycans were separated by AX-10 chromatography and analysed by gas chromatography. It appears that, compared to α₁-acid glycoprotein_N, α₁-acid glycoprotein_PB had a higher carbohydrate content (31.7% compared to 26%) and a non-negligible amount of neutral oligosaccharide (12.2% compared to 1.3%). No tetrasialyl oligosaccharides in α₁-acid glycoprotein_PB were detected, whereas their relative proportion in α₁-acid glycoprotein_N was 27%.     

Effect of heterochiral inversions on the structure of a β-hairpin peptide

We study computationally a family of β-hairpin peptides with systematically introduced chiral inversions, in explicit water, and we investigate the extent to which the backbone structure is able to fold in the presence of heterochiral perturbations. In contrast to the recently investigated case of a helical peptide, we do not find a monotonic change in secondary structure content as a function of the number of L- to D-inversions. The effects of L- to D-inversions are instead found to be highly position-specific. Additionally, in contrast to the helical peptide, some inversions increase the stability of the folded peptide: in such cases, we compute an increase in β-sheet content in the aqueous solution equilibrium ensemble. However, the tertiary structures of the stable (folded) configurations for peptides for which inversions cause an increase in β-sheet content show differences from one another, as well as from the native fold of the nonchirally perturbed β-hairpin. Our results suggest that although some chiral perturbations can increase folding stability, chirally perturbed proteins may still underperform functionally, given the relationship between structure and function.     

Effect of aqueous ethanol on the triple helical structure of collagen

Collagen, the most abundant protein in mammals, is widely used for making biomaterials. Recently, organic solvents have been used to fabricate collagen-based biomaterials for biological applications. It is therefore necessary to understand the behavior of collagen in the presence of organic solvents at low (≤50 %, v/v) and high (≥90 %, v/v) concentrations. This study was conducted to examine how collagen reacts when exposed to low and high concentrations of ethanol, one of the solvents used to make collagen-based biomaterials. Solubility testing indicated that collagen remains in solution at low concentrations (≤50 %, v/v) of ethanol but precipitates (gel-like) thereafter, irrespective of the method of addition of ethanol (single shot or gradual addition); this behavior is different from that observed recently with acetonitrile. Collagen retains its triple helix in the presence of ethanol but becomes thermodynamically unstable, with substantially reduced melting temperature, with increasing concentration of ethanol. It was also found that the CD ellipticity at 222 nm, characteristic of the triple-helical structure, does not correlate with the thermal stability of collagen. Time-dependent experiments reveal that the collagen triple helix is kinetically stable in the presence of 0–40 % (v/v) ethanol at low temperature (5 °C) but highly unstable in the presence of ethanol at elevated temperature (~34 °C). These results indicate that when ethanol is used to process collagen-based biomaterials, such factors as temperature and duration should be done taking into account, to prevent extensive damage to the triple-helical structure of collagen .     

Fish diversity and community structure in two small tributaries of the Paraná River,Paraná State,Brazil

In eleven sites on two small tributaries of the Paraná River (North-West Paraná State), 6.8 and 4.0 km in length, 1263 fish specimens of 28 taxons and 14 families were collected using electrofishing. Up to twelve years ago the catchments of the two rivers were covered by tropical jungle; this has now been replaced by pasture and arable fields. Mean diversity indices of Simpson and Shannon indices were close to 0.6, which would indicate that human impact affected fish populations although the river beds have retained their original shape, except cleared of riparian trees. Despite their close location (about 18 km), the two streams differed from each other in their fish faunal composition. The distinctive nature of the fish communities in the two streams was a result of: conductivity, pH, also hiding places, riparian vegetation, submerged macrophytes and depth and width of the rivers.     

Ecological Monitoring of the Water Area of Port Vostochnyi (Wrangel Bay) in the Sea of Japan (1995–2002)

Benthic surveys carried out in 1989 (literature data), 1995, and 2001 (original data) revealed changes in the structure of soft bottom communities of Wrangel Bay (Peter the Great Bay, Sea of Japan), where a deep-water port of Vostochnyi is situated. The functioning of the port has caused no significant environmental pollution by heavy metals, hydrocarbons, and other pollutants. Bottom dredging and the siltation induced by it have drastically lowered the benthos biomass, changed benthic communities, and altered their trophic structure. Sestonophages have disappeared nearly altogether being replaced by detrivores. The ecological state of the benthos is characterized as unstable.     

Environmental DNA as a ‘Snapshot’ of Fish Distribution: A Case Study of Japanese Jack Mackerel in Maizuru Bay,Sea of Japan

Recent studies in streams and ponds have demonstrated that the distribution and biomass of aquatic organisms can be estimated by detection and quantification of environmental DNA (eDNA). In more open systems such as seas, it is not evident whether eDNA can represent the distribution and biomass of aquatic organisms because various environmental factors (e.g., water flow) are expected to affect eDNA distribution and concentration. To test the relationships between the distribution of fish and eDNA, we conducted a grid survey in Maizuru Bay, Sea of Japan, and sampled surface and bottom waters while monitoring biomass of the Japanese jack mackerel (Trachurus japonicus) using echo sounder technology. A linear model showed a high R² value (0.665) without outlier data points, and the association between estimated eDNA concentrations from the surface water samples and echo intensity was significantly positive, suggesting that the estimated spatial variation in eDNA concentration can reflect the local biomass of the jack mackerel. We also found that a best-fit model included echo intensity obtained within 10–150 m from water sampling sites, indicating that the estimated eDNA concentration most likely reflects fish biomass within 150 m in the bay. Although eDNA from a wholesale fish market partially affected eDNA concentration, we conclude that eDNA generally provides a ‘snapshot’ of fish distribution and biomass in a large area. Further studies in which dynamics of eDNA under field conditions (e.g., patterns of release, degradation, and diffusion of eDNA) are taken into account will provide a better estimate of fish distribution and biomass based on eDNA.     

Bacterioplankton of the Kola Bay, Barents Sea, (micro-and nanoforms) based on 2002–2003 monitoring data

Hydrochemical and microbiological investigation in the Kola Bay in 2002–2003 demonstrated that the distribution of bacteria is notably influenced by biogeochemical barriers formed by mixing fresh and sea water. Seasonal changes in the appearance of filterable bacteria, considerable quantities of gram-positive bacteria with thick cell walls, dwarf bacteria, spheroplasts, elementary bodies, and cells with abnormal cell walls during the polar night have been revealed. Cultured bacterial colonies were represented by polymorphic cells. The data obtained refine our knowledge about organotrophic activity of bacterioplankton during the polar night.     

Official statement of the Japan Monkey Centre on the ‘Shimokita incident’

The Japan Monkey Centre issued the following official statement concerning the aerial spraying of herbicide which was carried out at the end of June on the Shimokita Peninsula. It invites all who are interested in the research of nature to understand and support its aim for the conservation of wild Japanese monkeys and the protection of nature from artificial destruction. Copies of the statement (in Japanese) have been sent to a number of inland individuals and organizations concerned.     

Temporal fluctuations of the phytoplankton community of the Baía River, in the upper Paraná River floodplain, Mato Grosso do Sul, Brazil

Subsurface samples were taken monthly (March/1993 through February/1994) in the Baía River, a tributary of the right bank of the Paraná River (22° 43 S and 53° 17 W). We analyzed temporal changes in the phytoplankton community in relation to density, biomass, richness and species diversity, equitability, size structure, and dominance. We related these to regional climate and hydrology, and to the physical and chemical variables of the water column. We determined 119 taxa, wich were numerically dominated by the class Chlorophyceae with 37 taxa. The classes Cyanophyceae and Bacillariophyceae contributed the most abundant biomass and were responsible for the two peaks that were observed. The high water period was generally characterized by lower phytoplankton biomass, higher richness and species diversity, and higher density of nannoplanktonic species such as Monoraphidium tortile in March, and Cryptomonas brasiliensis in January. During low water, however, the highest values of phytoplankton biomass were recorded, with heterocytous cyanophytes dominating during the phase of greater stability of the water column, and filamentous diatoms during periods of mixing turbulence. The fluctuations observed indicate that the hydrosedimentological regime of the Paraná River, together with the climatological factors, constitute the main forcing functions acting on the Baía River phytoplankton.     

Annual variation in biomass and the community structure of crustacean zooplankton over 5 years in Lake Toya, Japan

The biomass and population dynamics of crustacean zooplankton were determined in oligotrophic Lake Toya in Japan over 5 years from May 1992 to May 1997. In 1992 and 1993, zooplankton biomass was up to 4.3 g dry weight m^?2, whereas it decreased to <1 g dry weight m^?2 after 1994. This extreme change in biomass was associated with the succession of dominant species from larger ones, such as Daphnia longispina and Cyclops strenuus (s. lat.), to smaller ones, such as Eubosmina tanakai and Bosmina longirostris. Consequently, this biomass change seemed to cause an increase in the chlorophyll a concentration in the euphotic zone and a decline in lake transparency. Because the birth rates of the dominant species were somewhat higher after 1994, the decline in the populations of larger crustaceans seemed to depend more on their rate of death rather than rate of birth, and this higher death rate is not considered to be attributed to food shortage. Although these results strongly suggest a top-down cascading effect of fish predation upon crustaceans, annual catches of two commercially important planktivorous fish species have also decreased in the lake, coincidentally with decreases in zooplankton biomass. This may be attributable to fishing regulations that prohibit catching smaller fish, implying that such smaller fish affect zooplankton and phytoplankton, as well as lake transparency.