Peat respiration and decomposition in Antarctic terrestrial moss communities

Oxygen uptake by the peat of two Antarctic bryophyte communities (a moss turf and a moss carpet) is converted to organic matter loss and used to derive the rate of decomposition. The decay rates obtained in this way are evaluated in two mathematical models which simulate the accumulation of dead organic matter (DOM) in the communities from the litter production and decomposition rate. Litter production, the extent of DOM accumulations at present on the sites and mean decomposition rates (i.e. fraction of standing crop lost per year) were 409 g m^-2 year^-1, 33.5 kg m^-2 and 0.017 g g^-1 year^-1 in the moss turf and 392 g m^-2 year^-1, 29.6 kg m-² and 0.010 g g^-1 year^-1 in the moss carpet respectively (all weights expressed as dry weight). Aerobic decomposition rate declined with depth in both communities. From the model's predictions it is suggested that the observed decay rate was too high in the moss turf and too low in the carpet. Possible reasons for this are discussed and suggestions made for future work.     

Do Root Exudates Enhance Peat Decomposition?

Despite the importance of understanding controls on microbial carbon (C) mineralization in peat soils, the role of vascular plant root exudates is still unclear. To determine whether root exudates could stimulate enhanced decomposition of peat, we utilized an in-vitro method involving the addition of a solution similar to root exudates (6 glucose-C: 2 citrate-C: 2 amino acid-C, at 3 addition levels) to peat, incubating the mixture and measuring CO₂ produced over 20 d and microbial biomass and dissolved organic carbon (DOC) at the end of the incubation. We defined priming as inorganic C (IC) production (CO₂ + calculated dissolved inorganic C) during the incubation being greater than that attributed to the control peat plus the added C. An addition level of 0.083 mg C g^?1 dry peat, estimated to represent root exudation over one 12-h sunny day in a bog, caused an enhancement in IC production that exceeded that produced in the controls and the amount of added C after 8 d, with rates levelling to control values after 15 d. At the end of the incubation nearly 3 times the amount added C had been mineralized, relative to the control, however this represented only 4% of total microbial respiration in the controls. Although the priming effect pattern appeared to be real throughout repeated measurements in our experiments, the statistical probabilities were not always large due to high variability in background CO₂ production levels. Given the observed long lag-times and overall small magnitude and large variability in observed effects, we conclude that although priming of decomposition appears to occur in peatlands, it likely has only a minor overall impact on net C loss to the atmosphere.     

Genome Size in Sphagnum (Peat Moss)

Abstract: Genome size was determined in thirty Austrian species of Sphagnum, using Feulgen absorbance photometry conducted on a video-based image analysis system (CIRES), and for comparison on a scanning cytophotometer (Leitz MPV II) with strongly correlated results. Pisum sativum (1C = 4.42pg DNA) was used for internal standardization. Between species, two levels of ploidy, haploid and diploid, could be unambiguously identified (although this identification remains, strictly speaking, hypothetical, as long as exact parallel chromosome counts are not available). Twenty-six haploid species yielded values from 0.392 pg to 0.506 pg DNA (1C), and four diploid species (including two varieties of S. palustre) from 0.814 pg to 0.952 pg. The average ratio between levels was 1:2.049. Variation between species within sections was lower than between sections. In some cases significant differences between accessions of one species were found. The genome size of Sphagnum palustre presented here strongly deviates from one estimate of this species in the literature.     

Carbon Dioxide and Methane Emissions from Peat Soil in an Undrained Tropical Peat Swamp Forest

Ecosystems - This study investigates the factors controlling the soil CO2 and CH4 fluxes and quantifies annual cumulative soil respiration (RS), heterotrophic respiration (RH), and soil CH4...     

Peat Hydrolysate Medium Optimization for Pullulan Production

Peat hydrolysate, a diluted acid-autoclaved extract of peat, was used as a substrate for the production of the extracellular polysaccharide pullulan by three strains of Aureobasidium pullulans, 140B, 142, and 2552. It was found that the addition of (NH₄)₂SO₄ and K₂HPO₄ as sources of nitrogen and phosphate, respectively, is not necessary for the polysaccharide production. The economically optimized culture medium for large-scale production of pullulan contains peat hydrolysate, 0.05% NaCl, 0.02% MgSO₄, and 0.01% antifoam FG-10. The initial pH of peat hydrolysate medium is adjusted to its optimum value of 6.0 with Ca(OH)₂. The total ingredient cost for the production of each kilogram of pullulan with optimized medium is only 1/10 of that with the nonoptimized medium. In this study, a zero cost for peat hydrolysate was assumed, since it is an effluent of the peat and peat processing industries.     

恶臭假单胞细菌与紫花苜蓿在泥炭培养体中结合定殖研究

在植物根系定殖外源微生物是促进植物健康生长和污染土壤修复的重要方法,而植物根部存在适宜的生长空间是外源微生物定殖的关键。利用泥炭是植物和微生物优良的培养基质的特点,将泥炭作为外源微生物和植物根部的结合体,研究在播种时期接种和露根时期接种条件下,恶臭假单胞细菌(AB-92019)在泥炭与苜蓿根系构成的定殖环境中的定殖动态和定殖密度。结果表明:2种定殖时期在泥炭体的定殖效果有明显不同,露根时期接种后第20 d的定殖密度为6.10 logcfu/g干泥炭;播种时期接种定殖密度下降较快,第20 d的定殖密度为5.62 logcfu/g干泥炭。而在苜蓿根系20 d后的定殖密度,播种时期接种(3.90 logcfu/g鲜根)高于露根时期接种(3.03 logcfu/g鲜根)。并且2种时期定殖都不影响苜蓿正常的生长。     

Acidophilic Methanotrophic Communities from Sphagnum Peat Bogs

Highly enriched methanotrophic communities (>25 serial transfers) were obtained from acidic ombrotrophic peat bogs from four boreal forest sites. The enrichment strategy involved using media conditions that were associated with the highest rates of methane uptake by the original peat samples, namely, the use of diluted mineral medium of low buffering capacity, moderate incubation temperature (20°C), and pH values of 3 to 6. Enriched communities contained a mixture of rod-shaped bacteria arranged in aggregates with a minor contribution of Hyphomicrobium-like cells. The growth stoichiometry of isolates was characteristic of methanotrophic bacteria (CH₄/O₂/CO₂=1:1.1:0.59), with an average apparent yield of 0.41 ± 0.03 g of biomass C/g of CH₄-C. DNA from each enrichment yielded a PCR product of the expected size with primers for both mmoX and mmoY genes of soluble methane monooxygenase. Two types of sequences were obtained for PCR-amplified fragments of mmoX. One of them exhibited high identity to the mmoX protein of the Methylocystis-Methylosinus group, whereas the other showed an equal level of divergence from both the Methylosinus-Methylocystis group and Methylococcus capsulatus (Bath) and formed a distinct branch. The pH optimum for growth and for CH₄ uptake was 4.5 to 5.5, which is very similar to that for the optimum CH₄ uptake observed in the original peat samples. These methanotrophs are moderate acidophiles rather than acidotolerant organisms, since their growth rate and methane uptake were much lower at neutral pH. The growth of the methanotrophic community was enhanced by using media with a very low salt content (20 to 200 mg/liter), more typical of their natural environment. All four enriched communities grew on N-free medium.     

Ecosystem Respiration in a Cool Temperate Bog Depends on Peat Temperature But Not Water Table

Ecosystem respiration (ER) is an important but poorly understood part of the carbon (C) budget of peatlands and is controlled primarily by the thermal and hydrologic regimes. To establish the relative importance of these two controls for a large ombrotrophic bog near Ottawa, Canada, we analyzed ER from measurements of nighttime net ecosystem exchange of carbon dioxide (CO₂) determined by eddy covariance technique. Measurements were made from May to October over five years, 1998 to 2002. Ecosystem respiration ranged from less than 1 μmol CO₂ m⁻² s⁻¹ in spring (May) and fall (late October) to 2–4 μmol CO₂ m⁻² s⁻¹ during mid-summer (July-August). As anticipated, there was a strong relationship between ER and peat temperatures (r² = 0.62). Q₁₀ between 5° to 15°C varied from 2.2 to 4.2 depending upon the choice of depth where temperature was measured and location within a hummock or hollow. There was only a weak relationship between ER and water-table depth (r² = 0.11). A laboratory incubation of peat cores at different moisture contents showed that CO₂ production was reduced by drying in the surface samples, but there was little decrease in production due to drying from below a depth of 30 cm. We postulate that the weak correlation between ER and water table position in this peatland is primarily a function of the bog being relatively dry, with water table varying between 30 and 75 cm below the hummock tops. The dryness gives rise to a complex ER response to water table involving i) compensations between production of CO₂ in the upper and lower peat profile as the water table falls and ii) the importance of autotrophic respiration, which is relatively independent of water-table position.     

Peat CO2 production in a natural and cutover peatland: Implications for restoration

Although studies have shown that peatland drainage andharvesting alter local hydrology, microclimate, and peatcharacteristics, little is known about the effects of these changes onCO₂ production rates. This study examines the differentfactors affecting CO₂ production from natural and cutoverpeatlands. Laboratory peat incubations were performed under aerobic andanaerobic conditions to determine the influence of temperature, soilmoisture, and peat depth on CO₂ production rates from peatsamples taken from: (1) a natural peatland; (2) a 2-yearpost-cutover peatland and; (3) a 7-year post-cutover peatland.CO₂ production rates ranged from 0.21 to 4.87 µmolg^–1 d^–1 under anaerobic conditions,and from 0.37 to 15.69 µmol g^–1d^–1 in the aerobic trials. While no significantdifferences were found between the CO₂ production rates ofthe two cutover sites, the natural site consistently displayed higherproduction values. The natural site was also the only site to exhibitstrong depth dependent trends, thus indicating the importance of theupper peat layer with respect to substrate quality. Higher productionrates were found under aerobic than anaerobic conditions, with thegreatest response to oxygen observed at the natural site. Productionrates increased with both temperature and soil moisture, with maximumproduction rates found at 20 °C and 92% moisture content.Temperature responses were generally greater at the cutover sites, whilesoil moisture had greater effects on the natural site peat.Results of this work agree with previous studies that suggest that itis essential to begin restoration once a cutover peatland is abandoned.Re-wetting a cutover peatland (through restoration practices) isnecessary to prevent an increase in peat temperature and CO₂production since cutover peat has higher Q₁₀ values thannatural peat. A decrease in overall peatland oxidation should reduce thepersistent source of atmospheric CO₂ from cutover peatlandsand the irreversible changes in peat structure that impedeSphagnum re-establishment.     

Microbial Formation of Dimethyl Sulfide in Anoxic Sphagnum Peat

Peat bogs dominated by Sphagnum spp. have relatively high areal rates of dimethyl sulfide (DMS) emission to the atmosphere. DMS was produced in anoxic slurries of Sphagnum peat with a linear time course and with an average rate of 40.4 (range, 22.0 to 68.6) nmol per liter of slurry (middot) day(sup-1) observed in nine batches of slurry. Methanethiol (MeSH) was produced at roughly similar rates over the typical 4- to 8-day incubations. DMS and MeSH production in these acidic (pH 4.2 to 4.6) peats were biological, as they were stopped completely by autoclaving and inhibited strongly by addition of antibiotics and 500 (mu)M chloroform. Endogenous DMS production may be due to the degradation of S-methyl-methionine, dimethyl sulfoxide, or methoxyaromatic compounds (e.g., syringic acid), each of which stimulated DMS formation when added at 5 to 10 (mu)M concentrations. However, on the basis of the high rates of thiol (MeSH and ethanethiol) methylation activity that we observed and the availability of endogenous MeSH, we suggest that methylation of MeSH is the major pathway leading to DMS formation in anaerobic peat. Solid-phase adsorption of MeSH plays a key role in its availability for biomethylation reactions. Additions of acetate (1.5 mM) or compounds which could cause acetate to accumulate (e.g., glucose, alanine, and 2-bromoethanesulfonate) suppressed DMS formation. It is likely that acetogenic bacteria are involved in DMS formation, but our data are insufficient to allow firm conclusions about the metabolic pathways or organisms involved. Our observations are the first which point to the methylation of MeSH as the major mechanism for endogenous DMS production in any environment. The rates of net DMS production observed are sufficient to explain the relatively high fluxes of DMS emitted to the atmosphere from Sphagnum sp.-dominated wetlands.     

Modeling Northern Peatland Decomposition and Peat Accumulation

To test the hypothesis that long-term peat accumulation is related to contemporary carbon flux dynamics, we present the Peat Decomposition Model (PDM), a new model of long-term peat accumulation. Decomposition rates of the deeper peat are directly related to observable decomposition rates of fresh vegetation litter. Plant root effects (subsurface oxygenation and fresh litter inputs) are included. PDM considers two vegetation types, vascular and nonvascular, with different decomposition rates and aboveground and belowground litter input rates. We used PDM to investigate the sensitivities of peat accumulation in bogs and fens to productivity, root:shoot ratio, tissue decomposability, root and water table depths, and climate. Warmer and wetter conditions are more conducive to peat accumulation. Bogs are more sensitive than fens to climate conditions. Cooler and drier conditions lead to the lowest peat accumulation when productivity is more temperature sensitive than decomposition rates. We also compare peat age–depth profiles to field data. With a very general parameterization, PDM fen and bog age–depth profiles were similar to data from the the most recent 5000 years at three bog cores and a fen core in eastern Canada, but they overestimated accumulation at three other bog cores in that region. The model cannot reliably predict the amount of fen peat remaining from the first few millennia of a peatland's development. This discrepancy may relate to nonanalogue, early postglacial climatic and nutrient conditions for rich-fen peat accumulation and to the fate of this fen peat material, which is overlain by a bog as the peatland evolves, a common hydroseral succession in northern peatlands. Because PDM sensitivity tests point to these possible factors, we conclude that the static model represents a framework that shows a consistent relationship between contemporary productivity and fresh-tissue decomposition rates and observed long-term peat accumulation. Received 19 June 2000; accepted 24 January 2001.     

Hydrogenotrophic Methanogenesis by Moderately Acid-Tolerant Methanogens of a Methane-Emitting Acidic Peat

The emission of methane (1.3 mmol of CH₄ m⁻² day⁻¹), precursors of methanogenesis, and the methanogenic microorganisms of acidic bog peat (pH 4.4) from a moderately reduced forest site were investigated by in situ measurements, microcosm incubations, and cultivation methods, respectively. Bog peat produced CH₄ (0.4 to 1.7 μmol g [dry wt] of soil⁻¹ day⁻¹) under anoxic conditions. At in situ pH, supplemental H₂-CO₂, ethanol, and 1-propanol all increased CH₄ production rates while formate, acetate, propionate, and butyrate inhibited the production of CH₄; methanol had no effect. H₂-dependent acetogenesis occurred in H₂-CO₂-supplemented bog peat only after extended incubation periods. Nonsupplemented bog peat initially produced small amounts of H₂ that were subsequently consumed. The accumulation of H₂ was stimulated by ethanol and 1-propanol or by inhibiting methanogenesis with bromoethanesulfonate, and the consumption of ethanol was inhibited by large amounts of H₂; these results collectively indicated that ethanol- or 1-propanol-utilizing bacteria were trophically associated with H₂-utilizing methanogens. A total of 10⁹ anaerobes and 10⁷ hydrogenotrophic methanogens per g (dry weight) of bog peat were enumerated by cultivation techniques. A stable methanogenic enrichment was obtained with an acidic, H₂-CO₂-supplemented, fatty acid-enriched defined medium. CH₄ production rates by the enrichment were similar at pH 4.5 and 6.5, and acetate inhibited methanogenesis at pH 4.5 but not at pH 6.5. A total of 27 different archaeal 16S rRNA gene sequences indicative of Methanobacteriaceae, Methanomicrobiales, and Methanosarcinaceae were retrieved from the highest CH₄-positive serial dilutions of bog peat and methanogenic enrichments. A total of 10 bacterial 16S rRNA gene sequences were also retrieved from the same dilutions and enrichments and were indicative of bacteria that might be responsible for the production of H₂ that could be used by hydrogenotrophic methanogens. These results indicated that in this acidic bog peat, (i) H₂ is an important substrate for acid-tolerant methanogens, (ii) interspecies hydrogen transfer is involved in the degradation of organic carbon, (iii) the accumulation of protonated volatile fatty acids inhibits methanogenesis, and (iv) methanogenesis might be due to the activities of methanogens that are phylogenetic members of the Methanobacteriaceae, Methanomicrobiales, and Methanosarcinaceae.     

Nitrogen-Fixing Activity in Peat Soils from a Raised Bog

The nitrogenase (acetylene reductase) activity in monolithic and minced peat samples was found to be low, no more than 0.014–0.022 mg N/(kg h). Incorporation of the ¹⁵N₂ isotope into organic compounds of peat soil was 2.71–8.13 mg N/kg over 15 days. The nitrogen-fixing activity was the highest in a 10- to 20-cm layer of soil and much lower in the upper (under green moss) and deeper (20- to 30-cm) layers. The addition of glucose to soil samples stimulated nitrogen fixation considerably after 18–26 h. The maximum nitrogenase activity (3.5–3.8 mg N/(kg h)), observed after 60–70 h, coincided with the peak of respiratory activity. A repeated addition of glucose after its exhaustion increased nitrogenase activity, without a lag period, to 8.5 mg N/(kg h). Investigation of the effect of environmental factors (temperature, pH, aeration, and light intensity) on potential nitrogen-fixing activity in peat samples revealed that nitrogen fixation could proceed in a wide range of pH values (from 3.0 to 7.5) and temperatures (from 5 to 35°C). The nitrogen-fixing bacteria belonging to different trophic groups were enumerated by using nitrogen-free media with pH values and mineralization levels close to those in situ. In samples of peat soil, diazotrophic methanol-utilizing bacteria prevailed (2.0–2.5 × 10⁶ cells/g); the second largest group was facultatively anaerobic bacteria of the family Enterobacteriaceae.     

Methanotrophic Bacteria of Acidic Sphagnum Peat Bogs

Acidic Sphagnum peat bogs cover a considerable part of the territory of Russia and are an important natural source of biogenic methane, which is formed in their anaerobic layers. A considerable portion of this methane is consumed in the aerobic part of the bog profile by acidophilic methanotrophic bacteria, which comprise the methane filter of Sphagnum peat bogs and decrease CH₄ emission to the atmosphere. For a long time, these bacteria escaped isolation, which became possible only after the elucidation of the optimal conditions of their functioning in situ: pH 4.5–5.5; temperature, from 15 to 20°C; and low salt concentration in the solution. Imitation of these conditions and rejection of earlier used media with a high content of biogenic elements allowed methanotrophic bacteria of two new genera and species—Methylocella palustris and Methylocapsa acidiphila—to be isolated from the peat of Sphagnum peat bogs of European northern Russia and western Siberia. These bacteria are well adapted to the conditions in cold, acidic, oligotrophic Sphagnum peat bogs. They grow in a pH range of 4.2–7.5 with an optimum at 5.0–5.5, prefer moderate temperatures (15–25°C) and media with a low content of mineral salts (200–500 mg/l), and are capable of active dinitrogen fixation. Design of fluorescently labeled 16S rRNA–targeted oligonucleotide probes for the detection of Methylocella palustris and Methylocapsa acidiphila and their application to the analysis of sphagnum peat samples showed that these bacteria represent dominant populations of methanotrophs with a density of 10⁵–10⁶ cells/g peat. In addition to Methylocella and Methylocapsa populations, one more abundant population of methanotrophs was revealed (10⁶ cells/g peat), which were phylogenetically close to the genus Methylocystis.     

Microbial Respiration in Arctic Upland and Peat Soils as a Source of Atmospheric Carbon Dioxide

Knowledge on soil microbial respiration (SMR) rates and thus soil-related CO₂ losses from Arctic soils is vital because of the crucial importance of this ecosystem within the global carbon (C) cycle and climate system. Here, we measured SMR from various habitats during the growing season in Russian subarctic tundra by applying two different approaches: ¹⁴C partitioning approach and root trenching. The variable habitats encompassed peat and mineral soils, bare and vegetated surfaces and included both dry and moist ones. The field experiment was complemented by laboratory studies to measure bioavailability of soil carbon and identify sources of CO₂. Differences in bioavailability of soils, measured in the laboratory as basal soil respiration rates, were generally greater than inter-site differences in SMR rates measured in situ, suggesting secondary constraints at field conditions, such as soil C content. There was a tendency towards lower SMR in vegetated peat plateaus compared to upland mineral tundra (on average 137 vs. 185 g CO₂ m^?2 growing season^?1, respectively), but no significant differences were found. Surprisingly, the bare surfaces (peat circles) with 3500-year-old C at the surface exhibited about the largest SMR among all sites as shown by both methods. This was related to the general development of peat plateaus in the region, and uplifting of deeper peat with high C content to the surface during the genesis of peat circles. This observation is particularly relevant for decomposition of deeper peat in vegetated peat plateaus, where soil material similar to the bare surfaces can be found. The data indicate that the large stocks of C stored in permafrost peatlands are principally available for decomposition despite old age.     

Denitrification in Marl and Peat Sediments in the Florida Everglades

The potential for denitrification in marl and peat sediments in the Shark River Slough in the Everglades National Park was determined by the acetylene blockage assay. The influence of nitrate concentration on denitrification rate and N₂O yield from added nitrate was examined. The effects of added glucose and phosphate and of temperature on the denitrification potential were determined. The sediments readily denitrified added nitrate. N₂O was released from the sediments both with and without added acetylene. The marl sediments had higher rates than the peat on every date sampled. Denitrification was nitrate limited; however, the yields of N₂O amounted to only 10 to 34% of the added nitrate when 100 μM nitrate was added. On the basis of measured increases in ammonium concentration, it appears that the balance of added nitrate may be converted to ammonium in the marl sediment. The sediment temperature at the time of sampling greatly influenced the denitrification potential (15-fold rate change) at the marl site, indicating that either the number or the specific activity of the denitrifiers changed in response to temperature fluctuations (9 to 25°C) in the sediment. It is apparent from this study that denitrification in Everglades sediments is not an effective means of removing excess nitrogen which may be introduced as nitrate into the ecosystem with supply water from the South Florida watershed and that sporadic addition of nitrate-rich water may lead to nitrous oxide release from these wetlands.     

A Tropical Freshwater Wetland: II. Production,Decomposition, and Peat Formation

As much as 10% of the total carbon stored in peatlands occurs in the tropics. Although tropical peatlands are poorly understood scientifically, they are increasingly exploited for a variety of human uses. Our objective was to measure baseline carbon cycling data in one type of tropical peatland in order to understand better how peat accumulates in these ecosystems. Average plant production for two study sites on the island of Kosrae in the Federated States of Micronesia over 2 year was 1122 g C m⁻² year⁻¹, of which 1058 g C m⁻² year⁻¹ was aboveground plant production (bole, buttress and litterfall). Although leaves contributed a high proportion of total plant productivity, their rapid decomposition left little carbon for peat accumulation. In contrast, fine roots only contributed 10% to plant productivity, but their slow decomposition allowed them to accumulate as peat. Wood (branches and stems) probably contributed the most carbon to the formation of peat. Despite being on the soil surface, small branches decomposed more slowly than leaves because of their high C:N and lignin:N ratios. In summary, we suggest that tropical peatlands in Micronesia accumulate peat not because of high plant production but rather because of slow decomposition of roots and wood under anaerobic conditions that result from nearly constant high water levels.