Chemotaxonomical relationships between penguins and tubenoses

The compositions of the uropygial gland wax of seven species of birds of the order Procellariiformes (tubenoses) belonging to four different families are compared with one another and with those of birds belonging to other orders. The results are discussed from a chemotaxonomical viewpoint. For this purpose, the various parameters have been depicted on a 3-dimensional matrix. Although all birds investigated are obviously related to each other, two of the species (Diomedea and Garrodia) also show a relationship to different orders. The results support the opinion that the Procellariiformes are closely related to the Sphenisciformes (penguins).     

The Distribution of Mutant Alleles in a Subdivided Population

The results are presented from a simulation study of the spatial distribution of mutant alleles in a subdivided population. Statistical measures of the spatial pattern are defined in such a way that the same quantities could be measured in a geographic survey of allele frequencies in natural populations. Two types of quantities are discussed in this paper: (1) the occupancy distribution provides information on the presence or absence of the mutant in different numbers of demes; and (2) the conditional frequency distribution provides information about the extent of local differentiation when the mutant is present in different numbers of demes. Properties of these distributions are found for different types of natural selection acting on the mutant. Some results are presented for the same statistical measures based on samples of individuals from a fraction of the total number of demes. The simulation results for intermediate levels of the migration rates are compared with analytic results obtained on the limits of high and low migration rates. The main conclusion is that these measures of the spatial distribution of mutants in a subdivided population have simple properties that could provide a new perspective on data from natural populations.     

Consequences of selection in highly inbred <Emphasis Type="Italic">Drosophila</Emphasis> strains

The results of three long-term breeding and genetic experiments with Drosophila melanogaster performed at different times are summarized. Selections for different fitness components led to similar results. The data on the concentration of viability mutations in the inbred strains LA, LA⁺, and LA^? after 400 generations of selection and the strain ULA during its breeding are presented for the first time. The results of studying the genetic heterogeneity and spontaneous mutational process in Drosophila inbred strains comply with the idea of M.E. Lobashev that “a change in the direction of selection or acceleration of its rate is always accompanied by a concurrent increase in mutational variation.”     

Lists2Networks: Integrated analysis of gene/protein lists

Background  

Systems biologists are faced with the difficultly of analyzing results from large-scale studies that profile the activity of many genes, RNAs and proteins, applied in different experiments, under different conditions, and reported in different publications. To address this challenge it is desirable to compare the results from different related studies such as mRNA expression microarrays, genome-wide ChIP-X, RNAi screens, proteomics and phosphoproteomics experiments in a coherent global framework. In addition, linking high-content multilayered experimental results with prior biological knowledge can be useful for identifying functional themes and form novel hypotheses.     

Barrier elements of chromatin domains and nuclear envelope

The results of investigating the functions of different barrier elements, including insulators and MARs/SARs and the models of their effect, are described. The functions of neDNA (DNA from the nuclear envelopes) as a barrier element that protects the transgene from position-effect variegation and its interaction with insulators are discussed. The possible mechanisms of the functioning of structural and functional units of eukaryotic chromosomes of different species are suggested.     

Contributions to the theory of imitative behavior: The number of political parties as determined by biological and social factors

The theory of imitative behavior as applied tow mutually exclusive behavior patterns (N. Rashevsky,Mathematical Biology of Social Behavior, Rev. Ed., 1959; The University of Chicago Press) leads to the possibility of any numberw of different behavior patterns existing in a social group. Mutually inhibitory effects suppress the effectiveness of behavior of groups that are very small numerically. The manner in which the different biological and social parameters that enter into the theory of imitative behavior determine the number of different effective behaviors is discussed. The results are applied to the problem of what determines the number of political parties in different countries. This number is expected to increase with increasing spread of the distribution curves for the tendencies towards different behaviors, with decreasing imitation factors, and with increasing instability of psychophysical judgments of the average individuals.     

Phenotype definition is a main point in genome-wide association studies for bovine Mycobacterium avium ssp. paratuberculosis infection status

Paratuberculosis caused by Mycobacterium avium ssp. paratuberculosis (MAP) causes economic losses and is present in dairy herds worldwide. Different studies used different diagnostic tests to detect infection status and are the basis of genome-wide association (GWA) studies with inconsistent results. Therefore, the aim of this study was to identify and compare genomic regions associated with MAP susceptibility in the same cohort of cattle using different diagnostic tests. The GWA study was performed in German Holsteins within a case-control assay using 305 cows tested for MAP by fecal culture and additional with four different commercial ELISA-tests. Genotyping was performed with the Illumina Bovine SNP50 BeadChip. The results using fecal culture or ELISA test led to the identification of different genetic loci. Two single-nucleotide polymorphisms showed significant association with the ELISA-status. However, no significant association for MAP infection could be confirmed. Our results show that the definition of the MAP-phenotype has an important impact on the outcome of GWA studies for paratuberculosis.     

Computational biomechanics of human brain with and without the inclusion of the body under different blast orientation

Three different human head models in a free space are exposed to blast waves coming from four different directions. The four head–neck–body models composed of model a, with the neck free in space; model b, with neck fixed at the bottom; and model c, with the neck attached to the body. The results show that the effect of the body can be ignored for the first milliseconds of the head–blast wave interactions. Also one can see that although most biomechanical responses of the brain have similar patterns in all models, the shear stresses are heavily increased after a few milliseconds in model b in which the head motion is obstructed by the fixed-neck boundary conditions. The free-floating head model results are closer to the attached-body model.     

Convective Flow of Sisko Fluid over a Bidirectional Stretching Surface

The present investigation focuses the flow and heat transfer characteristics of the steady three-dimensional Sisko fluid driven by a bidirectional stretching sheet. The modeled partial differential equations are reduced to coupled ordinary differential equations by a suitable transformation. The resulting equations are solved numerically by the shooting method using adaptive Runge Kutta algorithm in combination with Newton''s method in the domain [0,∞). The numerical results for the velocity and temperature fields are graphically presented and effects of the relevant parameters are discussed in detail. Moreover, the skin-friction coefficient and local Nusselt number for different values of the power-law index and stretching ratio parameter are presented through tabulated data. The numerical results are also verified with the results obtained analytically by the homotopy analysis method (HAM). Additionally, the results are validated with previously published pertinent literature as a limiting case of the problem.     

Induction of cytoplasmic respiratory deficient mutants in yeast by the folic acid analogue, methotrexate

Summary The folic acid analogue, methotrexate, was found to be an effective inducer of the cytoplasmic petite mutation in different strains of S. carlsbergensis and S. cerevisiae. The induction varies considerably from strain to strain and also with growth conditions under which the experiments are carried out. Determination of mitochondrial protein synthesis in the presence of methotrexate shows a considerable decrease in incorporation of radioactive leucine before any significant induction of petites has taken place.These results and a comparison with results from other laboratories obtained with different drugs provide the basis for a proposed mechanism of petite induction by methotrexate.     

高血压大鼠不同血管平滑肌肌球蛋白磷酸化和脱磷酸化酶的变化

本文比较了正常和高血压大鼠不同动脉血管肌球蛋白轻链激酶（ＭＬＣＫ）和依赖Ｃａ＾２＋的钙调素磷酸酶（Ｃａ＾２＋／ＣａＭ－ＰＰ）活性的变化。结果表明：在自发性高血压大鼠（ＳＨＲ）不同血管ＭＬＣＫ的活性不同,依次为主动脉（Ａ）〉尾动脉（ＣＡ）〉肠系膜动脉（ＭＡ）;而在ＷＫＹ大鼠,该酶在不同血管的活性依次为Ａ〈〈ＣＡ〈〈ＡＭ。在ＷＫＹ大鼠,ＭＡ Ｃａ＾２＋／ＣａＭ－ＰＰ活性明显高于ＳＨＲ。在肾性高血压大鼠     

CLINAL VARIATION ASSOCIATED WITH EDAPHIC ECOTONES IN HYBRID POPULATIONS OF GAILLARDIA PULCHELLA

The variety pulchella of the outcrossing annual plant species Gaillardia pulchella consists of two edaphic races in central Texas which are divergent for one morphological and four electrophoretic characters. Reduced pollen stainability in F₁ hybrids suggests the races are also divergent in chromosome structure. The recent proliferation of this species on roadsides and in pastures has led to hybridization between these races. An analysis of character variation in three hybrid populations revealed significant clinal variation associated with edaphic ecotones, and the width of these clines was found to vary among characters in a consistent pattern. It is argued that this pattern is the result of different characters experiencing different effective selection regimes, with narrower clines reflecting greater differentials in effective selection. Several mechanisms are discussed by which selection may impede the transgression of alleles across the ecotones in these populations. The results of this study are compared to the results of parallel studies on the autogamous annual species Avena barbata in California, and it is suggested that the difference between these two species in the width of clines separating edaphic ecotypes may be accounted for by their different breeding systems.     

Structure–activity relationships of neuropeptide Y analogues with respect to Y1 and Y2 receptors

Secondary structure investigations, affinities, and activities of neuropeptide Y analogues with respect to the Y₁ and the Y₂ receptor are reviewed. The results are discussed with respect to the different prerequisites for affinities to both receptor subtypes. The results from a systematic scanning of the hormone using L -alanine and from a large variety of discontinuous and cyclic analogs suggest that two different conformations of neuropeptide Y are adopted at the Y₁ and Y₂ receptors. Whereas a C-terminal turn structure is suggested for Y₁ receptor affinity, an α-helical conformation of the C-terminus is afforded for good binding to the Y₂ receptor. © 1994 John Wiley & Sons, Inc.     

Direct Measurements of Turgor Pressure Potentials: IV. NATURALLY OCCURRING PRESSURES IN GUARD CELLS AND THEIR RELATION TO SOLUTE AND MATRIC POTENTIALS IN THE EPIDERMIS

Measurements were made of turgor pressures in epidermal, subsidiary,and guard cells at different degrees of stomatal opening. Theresults are correlated with estimates of solute potentials ofthe different cell saps and with a postulated matric potentialof cell walls. The results contribute to an understanding ofthe role of the subsidiary cells in the stomatal mechanism especiallyin the Graminaceous type and the role of ‘tissue tension’as a pressure involved in turgor phenomena in epidermal tissue.The results make it possible to explain the abnormally largestomatal openings found after floating illuminated leaf tissueon water or keeping it in humid CO₂-free air.     

Differential mutagenic response in selected lines of Drosophila melanogaster

Summary The mutagenic efficiency of ionizing radiations has been tested on different lines of Drosophila melanogaster. It has been shown that differential lethal effects are obtained when irradiated females from different lines are mated to flies carrying heterozygous lethal genes. The results seem not to be attributable to differential expression of the lethality in the various crosses performed with the irradiated flies. This might suggest that gene activity is involved in the expression of the mutagenic effects of radiations.     

The activity coefficient of high density systems with hard-sphere interactions: the application of the IGCMC method

The inverse grand-canonical Monte Carlo (IGCMC) technique is used to calculate the activity coefficients of the following hard-sphere systems: one-component fluid, binary mixture and solvent primitive model (SPM) electrolyte. The calculations for a one-component fluid are performed at different densities. The components of a binary mixture differ in diameters (300 and 500 pm) with the results being presented for different density and composition of a mixture. For the SPM model, simulations are performed for a 1:1 electrolyte at different electrolyte concentrations at the packing fraction equal to 0.3. Ions and solvent molecules of the same or different sizes are considered. The results are compared with those reported by Adams (one-component fluid), with those calculated using the Ebeling and Scherwinski equation (one-component fluid and binary mixture) and with the predictions from the symmetric Poisson–Boltzmann theory and the mean spherical approximation (SPM electrolyte).     

Internal algorithm variability and among-algorithm discordance in statistical haplotype reconstruction

The potential effectiveness of statistical haplotype inference makes it an area of active exploration over the last decade. There are several complications of statistical inference, including: the same algorithm can produce different solutions for the same data set, which reflects the internal algorithm variability; different algorithms can give different solutions for the same data set, reflecting the discordance among algorithms; and the algorithms per se are unable to evaluate the reliability of the solutions even if they are unique, this being a general limitation of all inference methods. With the aim of increasing the confidence of statistical inference results, consensus strategy appears to be an effective means to deal with these problems. Several authors have explored this with different emphases. Here we discuss two recent studies examining the internal algorithm variability and among-algorithm discordance, respectively, and evaluate the different outcomes of these analyses, in light of Orzack (2009) comment. Until other, better methods are developed, a combination of these two approaches should provide a practical way to increase the confidence of statistical haplotyping results.