Systematics and Evolution of the Dasyurid Marsupial Genus Sminthopsis: I. The Macroura Species Group

Genetic variation within the macroura species group, which includes Sminthopsis macroura, S. virginiae, S. douglasi, and S. bindi, was examined through analyses of complete mitochondrial 12S rRNA gene sequences, partial control-region DNA sequences, and allozymes. Divergent genetic lineages appear to be present within S. macroura and S. virginiae, and it is likely that this genetic divergence equates to currently unrecognized taxonomic diversity. Specimens of S. macroura (as currently recognized) belong to three genetically distinct lineages that are highly divergent from one another. Two of these lineages may be synonymous with two previously recognized dunnart species—S. froggatti and S. stalkeri. The third appears to represent "true" S. macroura and is itself genetically heterogeneous, with a number of subgroups present within it that may also represent currently unrecognized taxa. The mitochondrial DNA sequence divergences observed between S. virginiae nitela and the two other S. virginiaesubspecies are equivalent to, or greater than, those noted between other dunnart species. Allozyme divergences between these subspecies were however slightly lower, and determination on whether S. virginiae nitela should be returned to full species status (S. nitela) may require further evidence. Phylogenetic relationships between species in the macroura group appear to have been partially resolved, with individual 12S rRNA and combined mitochondrial DNA analyses recovering S. bindi as the earliest diverging taxon. Other relationships between species in the group were either not consistently recovered or lacked strong support.     

Male-Driven Evolution in Closely Related Species of the Mouse Genus Mus

Recently, other researchers have found that closely related primate species had a lower male-to-female mutation rate ratio (α) than distantly related species. To determine if this is a general phenomenon affecting other mammalian orders, eleven species or subspecies of the rodent genus Mus and two outgroup species were compared. Intron sequences from a gene in the nonrecombining region of the Y chromosome Jarid1d (Smcy) and its X chromosomal gametolog, Jarid1c (Smcx), were analyzed in a phylogenetic context. The male-to-female mutation rate ratio for all thirteen taxa is approximately 2.5, which is similar to previous estimates in more distantly related rodents. However, when branches with lengths of more than 2.5% were removed from the analysis, the male-to-female mutation rate ratio dropped to 0.9. Thus, in closely related rodents, as in closely related primates, the male-to-female mutation rate ratio is lower than expected. [Reviewing Editor: Dr. Deborah Charlesworth] An erratum to this article is available at.     

Molecular Phylogeny of Tuco-Tucos, Genus Ctenomys (Rodentia: Octodontidae): Evaluation of the mendocinus Species Group and the Evolution of Asymmetric Sperm

The phylogenetic relationships among 23 individuals representing 14 species of underground hystricognath rodents of the genus Ctenomys were studied by analyzing variation of complete cytochrome b gene sequences. Maximum parsimony, neighbor joining, and maximum likelihood analyses were performed, using the octodontine genera Octodon and Tympanoctomys as outgroups. Our analyses support previous studies based on chromosomes and skull morphology that suggested a clade comprised of Argentinean and Uruguayan populations of C. rionegrensis. This clade is closely related to one comprised of C. flamarioni and the C. mendocinus species complex. Our analyses provide evidence that the symmetric sperm morph, which is common to other South American hystricognath rodents, is the plesiomorphic character state in Ctenomys and in Hystricognathi. Our analyses do not support the hypothesis that the sperm morphs define two major lineages of tuco-tuco species, because species with asymmetric sperm are diphyletic on the basis of cytochrome b sequences, and this morphology appears to have evolved twice in Ctenomys.     

黄枝衣科中国新记录属和种

报道了中国黄枝衣科(Teloschistaceae)的一中国新记录属粉黄衣属(新拟)(Xanthomendoza)和一中国新记录种漫粉黄衣(新拟)(Xanthomendoza ulophyllodes)及石黄衣属(Xanthoria)的一新记录种裂芽黄衣(新拟)(Xanthoria calcicola)。对漫粉黄衣的ITS序列进行了测定和系统发育分析,并对相关类群的形态和分子数据进行了讨论。对2新记录种的形态特征、生境与分布进行了详细描述,并提供了形态特征图。     

Molecular Evolution of P Transposable Elements in the Genus Drosophila. II. The obscura Species Group

A phylogenetic analysis of P transposable elements in the Drosophila obscura species group is described. Multiple P sequences from each of 10 species were obtained using PCR primers that flank a conserved region of exon 2 of the transposase gene. In general, the P element phylogeny is congruent with the species phylogeny, indicating that the dominant mode of transmission has been vertical, from generation to generation. One manifestation of this is the distinction of P elements from the Old World obscura and subobscura subgroups from those of the New World affinis subgroup. However, the overall distribution of elements within the obscura species group is not congruent with the phylogenetic relationships of the species themselves. There are at least four distinct subfamilies of P elements, which differ in sequence from each other by as much as 34%, and some individual species carry sequences belonging to different subfamilies. P sequences from D. bifasciata are particularly interesting. These sequences belong to two subfamilies and both are distinct from all other P elements identified in this survey. Several mechanisms are postulated to be involved in determining phylogenetic relationships among P elements in the obscura group. In addition to vertical transmission, these include retention of ancestral polymorphisms and horizontal transfer by an unknown mating-independent mechanism.     

The Stasis and Possible Patterns of Selection in Evolution of a Group of Related Species from the Bat Genus <Emphasis Type="Italic">Myotis</Emphasis> (Chiroptera,Vespertilionidae)

Phenotypic evolutionary rates were measured for craniometric characters in five extant closely related OTUs from the bat genus Myotis (Chiroptera, Vespertilionidae): M. myotis, M. blythii oxygnathus, M. b. omari, M. b. blythii, and M. nattereri using Lynch’s and Gingerich’s approaches. Cranial shape appeared to be more conservative than cranial size. Estimates for evolutionary rates were found to be lower than expected if the divergence had been produced solely by mutation and random drift. So, it can be concluded that stabilizing selection was the principal factor that maintained craniometric characters during the evolution of the studied species and prevented their greater diversification. The observed differences between the OTUs could be established by random drift or directional selection of rather moderate intensity. The rates of divergence between the ancestors of M. nattereri and the common ancestors of M. blythii and M. myotis apparently were higher than the rates of following divergence between M. myotis, M. b. oxygnathus, M. b. omari and M. b. blythii.     

Identification of One Intron Loss and Phylogenetic Evolution of Dfak Gene in the Drosophila melanogaster Species Group

Intron loss and its evolutionary significance have been noted in Drosophila. The current study provides another example of intron loss within a single-copy Dfak gene in Drosophila. By using polymerase chain reaction (PCR), we amplified about 1.3 kb fragment spanning intron 5–10, located in the position of Tyr kinase (TyK) domain of Dfak gene from Drosophila melanogaster species group, and observed size difference among the amplified DNA fragments from different species. Further sequencing analysis revealed that D. melanogaster and D. simulans deleted an about 60 bp of DNA fragment relative to other 7 Drosophila species, such as D. elegans, D. ficusphila, D. biarmipes, D. takahashii, D. jambulina, D. prostipennis and D. pseudoobscura, and the deleted fragment located precisely in the position of one intron. The data suggested that intron loss might have occurred in the Dfak gene evolutionary process of D. melanogaster and D. simulans of Drosophila melanogaster species group. In addition, the constructed phylogenetic tree based on the Dfak TyK domains clearly revealed the evolutionary relationships between subgroups of Drosophila melanogaster species group, and the intron loss identified from D. melanogaster and D. simulans provides a unique diagnostic tool for taxonomic classification of the melanogaster subgroup from other group of genus Drosophila.     

Systematics of the Monodelphic Species of Trichodoridae (Nematoda: Diphtherophorina) With Descriptions of a New Genus and Four New Species

To show the relationship of the monodelphic species of Trichodoridae with the nominal taxa, the genus Monotrichodorus is redefined, with the addition of one new species. The new genus Allotrichodorus is proposed on the basis of new species found in Brazil; and one new species is described in the genus Paratrichodorus.     

Molecular Systematics of Bats of the Genus Myotis (Vespertilionidae) Suggests Deterministic Ecomorphological Convergences

Based on extensive phenetic analyses, bats of the genus Myotis have been classically subdivided into four major subgenera each of which comprise many species with similar morphological and ecological adaptations. Each subgenus thus corresponds to a distinct “ecomorph” encompassing bat species exploiting their environment in a similar fashion. As three of these subgenera are cosmopolitan, regional species assemblages of Myotis usually include sympatric representatives of each ecomorph. If species within these ecomorphs are monophyletic, such assemblages would suggest extensive secondary dispersal across geographic areas. Conversely, these ecomorphological adaptations may have evolved independently through deterministic processes, such as adaptive radiation. In this case, phylogenetic reconstructions are not expected to sort species of the same ecomorph into monophyletic clades. To test these predictions, we reconstructed the phylogenetic history of 13 American, 11 Palaearctic, and 6 other Myotis species, using sequence data obtained from nearly 2 kb of mitochondrial genes (cytochrome b and nd1). Separate or combined analyses of these sequences clearly demonstrate the existence of several pairs of morphologically very similar species (i.e., sibling species) which are phylogenetically not closely related. None of the three tested subgenera constitute monophyletic units. For instance, Nearctic and Neotropical species currently classified into the three subgenera were clustered in a single, well-supported monophyletic clade. These species thus evolved independently of their ecological equivalents from the Palaearctic region. Independent adaptive radiations among species of the genus Myotis therefore produced strikingly similar evolutionary solutions in different parts of the world. Furthermore, all phylogenetic reconstructions based on mtDNA strongly supported the existence of an unsuspected monophyletic clade which included all assayed New World species plus M. brandtii (from the Palaearctic Region). This “American” clade thus radiated into a morphologically diverse species assemblage which evolved after the first Myotis species colonized the Americas. Molecular reconstructions support paleontological evidence that species of the genus Myotis had a burst of diversification during the late Miocene–early Pliocene epoch.     

Molecular Systematics and Phylogenetics of Gracilariacean Species from the Mediterranean Sea

Mediterranean reports of Gracilariaceae species, in particular those assigned to the G. verrucosa complex, were re-examined with the use of molecular tools, in order to verify their systematic position and better understand their distribution. Within this complex, we recognized four distinct taxa: Gracilariopsis longissima, Gracilaria gracilis, Gracilaria longa and a possible new species. The rbcL gene sequences, together with those of other terete Mediterranean entities, were included in a broad molecular phylogeny of the family. The reproductive characters of the studied taxa do not fit completely with published hypothesis on the generic and intrageneric relationships, suggesting that the anatomy of some subgroups should be better characterized.     

The Evolutionary History of the Transposable Element Penelope in the Drosophila virilis Group of Species

We have used phylogenetic techniques to study the evolutionary history of the Penelope transposable element in the Drosophila virilis species group. Two divergent types of Penelope have been detected, one previously described, clade I, and a new one which we have termed clade III. The phylogeny of some copies of the Penelope clade I element was partially consistent with the species phylogeny of the D. montana subphylad, suggesting cospeciation and allowing the estimation of the evolutionary rate of Penelope. Divergence times of elements found in different species are younger than the age of the species, suggesting horizontal transfer events. Electronic Supplementary Material Electronic Supplementary material is available for this article at and accessible for authorised users. [Reviewing Editor: Dr. Dmitri Petrov]     

沙芥属(十字花科)的起源、分类与进化研究进展

沙芥属(PugioniumGaertn.)最初是从匙荠属(Bunias)中分出来单独建立的属,ndhF系统树表明,该属和高河菜属(Megacarpaea)、Farsetia、香雪球属(Lobularia)、屈曲花属(Iberis)和Ionopsidium亲缘关系较近,且和高河菜属构成姐妹关系。自从沙芥属确立以来,先后发表过沙芥[P.cornutum(L.)Gaertn]、斧形沙芥(P.dolabratum Maxim.)、距果沙芥(P.calcaratum Kom.)、鸡冠沙芥(P.cristatum Kom.)、翅果沙芥(P.pterocarpum Kom.)等5个种和宽翅沙芥(P.dolabratumvar.platypterum H.L.Yang)1个变种,但形态统计学和分子生物学的证据表明,沙芥属应该仅包含沙芥(P.cornutum)和斧形沙芥(P.dolabratum)2个形态学物种。基于不同遗传背景的DNA分子标记的研究结果进一步表明,沙芥和斧形沙芥这2个形态学物种间的遗传分化明显,但种间分化的时间并不久远,它们很可能是更新世以来随中亚和中国西北沙漠发展扩张而形成的2个近期分化的姐妹种。该文对沙芥属的系统起源、属下分类和遗传进化方面的研究历史和最新研究进展进行综述,并提出了研究中存在的问题。     

风毛菊属6种植物的核型分析

采用常规压片技术对分布于横断山区菊科(Compositae)风毛菊属(Saussurea DC.)的6种植物进行染色体数目和核型分析。结果表明:尖苞雪莲（S.polycolea var.acutisquama）核型公式为:2n=2x=32=20m+12sm,属2B型;球花雪莲核（S.globosa）型公式为:2n=2x=34=16m+18sm,属2B型;重齿风毛菊(S.katochaete)核型公式为:2n=2x=32=8m+18sm+6st,属3B型;柱茎风毛菊(S.columnaris)核型公式为:2n=2x=32=24m+8sm,属2B型;禾叶风毛菊(S.graminea)核型公式为:2n=2x=28=8m+18sm+2st,属3B型;长毛风毛菊(S.hieracioides)核型公式为:2n=2x=32=12m+16sm+4st,属2B型。6个种染色体中均未发现随体。其中尖苞雪莲和柱茎风毛菊染色体为首次报道。     

西藏兰科植物1新记录属和2新记录种

该文报道了西藏兰科1个新记录属——坛花兰属(Acanthephippium)及其新记录种——锥囊坛花兰(Acanthephippium striatum Lindl),另1西藏新记录种为夏天麻(Gastrodia flavilabella S.S.Ying)。锥囊坛花兰与同属的中华坛花兰[A.gougahense(Guillaumin)Seidenfaden]和坛花兰(A.sylhetense Lindl.Gen)相近,主要区别在于后两者唇盘肉质增厚且萼囊宽而短钝。夏天麻植株形态类似于南天麻[G.javanica(Bl.)Lindl],后者花苞片宿存,为三角形;根状茎上不具珊瑚状根;唇盘基部爪上的胼胝体非球形。文中对新记录1属和2种兰科植物进行了描述,并附有新记录的特征照片,丰富了该区野生兰科植物本底资源。同时根据IUCN的评价标准,对其濒危等级进行了评估认定,提出了保护等级的建议。凭证标本保存于西藏高原生态研究所标本室(XZE)。     

An immunocytochemical study of the endocrine pancreas in the Australian fat-tailed dunnart (Sminthopsis crassicaudata)

Summary The endocrine pancreas of the Australian fattailed dunnart, Sminthopsis crassicaudata, was investigated by means of electron-microscopic immunocytochemistry using the protein A-gold technique on London resin (LR) white-embedded tissue. The primary antibodies used were raised against insulin, glucagon, somatostatin and pancreatic polypeptide. The morphology of the secretory granules differed in the four cell types. The insulin cells are pleomorphic, and the secretory granules composed of an electron-dense core surrounded by an electron-lucen halo. The glucago cells possess granules with an electron-dense core usually surrounded by a halo of less dense granular material. Somatostatin cells have large, less dense secretory granules. The pancreatic polypeptide cells show small, dense secretory granules. In order for an ultrastructural study to be considered reliable for the definite identification of endocrine cell types, it is essential that it be corroborated by immunocytochemical data at the light-or preferably electron-microscopic level. Recent developments in immuno-electron-microscopic techniques have contributed to a better knowledge of cells responsible for the secretion of a wide variety of hormones, as in this study.     

Four Tropical, Closely Related Fern Species belonging to the Genus Adiantum L. are Genetically Distinct as Revealed by ISSR Fingerprinting

The level and pattern of genetic variation was analyzed in four species of the fern genus Adiantum L., A. hispidulum Sw., A. incisum Forrsk., A. raddianum C.Presl, and A. zollingeri Mett. ex Kuhn, originating from South India, using the ISSR fingerprinting method. The populations of Adiantum possessed a considerable level of genetic variation, the diversity indices ranging from 0.284 to 0.464. Only 12% of the ISSR markers found were restricted to one species only, and 54% were detected in all four species. The analysis of molecular variance revealed that 71.1% of variation was present within populations. The proportion of variation detected among species was only 18.5% while the proportion of variation among populations within species equalled 10.4%. Despite the low level of intrageneric differentiation, the discriminant analysis and clustering of genetic distances indicated that the four Adiantum species are genetically distinct. The F_ST values calculated for the species were low, varying from 0.089 to 0.179. No linkage disequilibrium was detected between the loci. Such low level of differentiation among populations and the presence of linkage equilibrium reflect that the life history of Adiantum ferns apparently involves common or relatively common sexuality, effective wind-dispersal of spores and outcrossing.