The biological features of the Kildin cod,Gadus morhua kildinensis Derjugin, 1920 (Gadidae)

The morphological and biological characteristics of the unique isolated population of the Kildin cod that inhabit the relic Lake Mogilnoye (Kildin Island, Barents Sea) were studied using a complex of methods. This subpolar meromictic marine lake was formed more than 1000 years ago by a filtering pebble–stone bar that separated the lagoon from the Kildin Strait. The current status of the lake has been assessed. An analysis of the properties of the Lake Mogilnoye ecosystem, including assessment of this body of water and the role and features of various groups of organisms, has been performed for the first time by using a balance model of the ECOPATH type.     

Data on variation of microsatellite loci in Kildin cod <Emphasis Type="Italic">Gadus morhua kildinensis</Emphasis> (Gadidae)

Variation of microsatellite loci Gmo8, Gmo-G12, Gmo-G18, Gmo19, PGmo32, Gmo34, and Gmo35 is investigated in Kildin cod Gadus morhua kildinensis. The investigated loci are characterized by a low level of variation: five loci are represented by two-allele systems and three loci are monomorphic. Mean value of heterozygosity calculated by all investigated loci is lower in Kildin cod than in Atlantic Gadus morhua—0.2854 vs. 0.5667.     

New Data on the Biology of Kildin Cod Gadus morhua kildinensis (Gadidae) from Lake Mogilnoe (Kildin Island,the Barents Sea) Obtained by Echo Sounding and Underwater Photography

Journal of Ichthyology - The distribution of the Kildin cod Gadus morhua kildinensis in Lake Mogilnoye (Kildin Island, Barents Sea) is assessed based on the results of echo sounding and...     

Mixed stock analysis and the power of different classes of molecular markers in discriminating coastal and oceanic Atlantic cod (<Emphasis Type="Italic">Gadus morhua</Emphasis> L.) on the Lofoten spawning grounds,Northern Norway

Atlantic cod (Gadus morhua) encompasses many different populations or stocks, which in part are managed separately. In the northeast Atlantic cod is divided into two main management units; northeast Arctic cod and coastal cod. These two groups have traditionally been separated by otolith classification. In this study, the power of different classes of genetic markers in separating the two cod groups was investigated. The variation in thirteen genetic markers, including allozymes, haemoglobin, the scDNA locus Pantophysin (Pan I) and a number of microsatellites was investigated, and mixed stock analysis and individual assignment tests were performed on samples comprising a mixture of individuals of putative coastal and oceanic type cod. The genetic analyses showed a large genetic differentiation between outer stations and stations located closer to the mainland shore. Mixed stock analysis and individual assignment tests used for estimation of stock proportions gave results similar to those obtained by otolith classification. Guest editors: J. Davenport, G. Burnell, T. Cross, M. Emmerson, R. McAllen, R. Ramsay & E. Rogan Challenges to Marine Ecosystems     

Embryonic development of the pacific cod <Emphasis Type="Italic">Gadus macrocephalus</Emphasis> (Gadidae)

Incubation of pacific cod eggs was divided into eight series, in which temperatures were set at −0.04°C to +4.03°C and warm and cold conditions alternated. The morphological changes that took place during the embryogenesis were described in detail using the results of the incubation. Twenty-two morphological characters that could be identified easily and that characterized the morphogenesis were defined in the course of development. The results of the incubation and data from the literature showed that the duration of the embryonic period in the Pacific cod’s lifecycle grew exponentially as water temperature decreased. It was found during the experiment that developing cod eggs survived low water temperatures up to freezing, as well as abrupt warming or cooling (over 3°C). According to the widely accepted Rass scale, the first stage of the Pacific cod embryogenesis takes 21% of its total duration, the second stage 23%, the third, 17%, and the fourth, 39%. However, at a temperature below 0°C, the relative duration of the stages of cleavage and embryonic shield was slightly shortened, whereas the mature embryo stage extended to almost half of the embryogenesis period. A more comprehensive analysis of temperature effects on embryogenesis revealed that the reduction of the rate of embryogenesis upon a temperature decrease occurred mostly at later stages of embryo growth. Modeling of development using defined morphological characters showed that the duration of embryogenesis grew linearly as the incubation temperature dropped in the first half of the embryogenesis and exponentially in the second half. A function was selected that described the obtained results most satisfactorily and that could be used for estimating the duration of the entire embryogenesis or any its stages within the range of water temperatures typical for Pacific cod.     

Marine Lake Mogilnoe (Kildin Island,the Barents Sea): one hundred years of solitude

Lake Mogilnoe (Kildin Island, the Barents Sea) is a marine stratified lake, a refuge for landlocked populations of marine organisms. Unlike other known marine lakes from polar areas, which communicate with the sea by water percolation at the surface, Mogilnoe has a subterranean connection with the sea like tropical and subtropical anchialine lakes. Similarly to some other marine lakes, Mogilnoe has traditionally been considered to be biologically isolated from the sea and subject to little change. We review the current status of the physical features, zooplankton and benthos of Mogilnoe and trace changes that have occurred in the lake since the start of observations in 1894. The anaerobic bottom water layer has expanded by 100 %, while the upper freshwater layer has diminished by 40 %. The species diversity of zooplankton and macrobenthos has halved. The occurrence of Atlantic cod likens Mogilnoe to some other Arctic marine lakes while the presence of large flocks of sea anemones, scyphomedusae and suberitid sponges makes it similar to tropical anchialine lakes. Lake Mogilnoe is not entirely biologically isolated; accidental introduction of species from the sea does occur. We argue that the idealised model of an isolated steady-state ecosystem can be applied to a marine lake with caution. A model of fluctuating abiotic environment and partial biological isolation portrays the real situation better.     

Mitochondrial DNA sequence variation and genetic stock structure of Atlantic cod (Gadus morhua) from bay and offshore locations on the Newfoundland continental shelf

Bay cod, Atlantic cod (Gadus morhua) that over-winter in the deep-water bays of northeastern Newfoundland, have historically been regarded as distinct in migration and spawning behaviour from offshore (Grand Bank) cod stocks. To investigate their genetic relationships, we determined the DNA sequence of a 307-base-pair portion of the mitochondrial cytochrome b gene for 236 adult cod taken from the waters off northeastern Newfoundland, including fish found over-wintering and spawning in Trinity Bay. Although 17 genotypes were found, a single common genotype occurs at a frequency of greater than 80% in all samples, and no alternative genotype occurs at a frequency of greater than 3%. Genotype proportions did not differ significantly among samples. Measures of genetic subdivision among sampling locations are nil. Cod over-wintering in Trinity Bay are not genetically distinct from offshore cod. In combination with tagging and physiological studies, these data suggest that there is sufficient movement of cod between bay and offshore locations to prevent the development or maintenance of independent inshore stocks. Adult cod that over-winter in Trinity Bay appear to represent an assemblage of temporarily nonmigratory fish that have become physiologically acclimated to cold-water inshore environments. The pattern of genetic variation in northern cod suggests a recent population structure characterized by extensive movement of contemporary individuals superimposed on an older structure characterized by a bottleneck in the population size of cod in the north-western Atlantic.     

Variability of microsatellite loci of Greenland cod <Emphasis Type="Italic">Gadus ogac</Emphasis> Richardson 1836: Comparison with other species of <Emphasis Type="Italic">Gadus</Emphasis> genus (Gadidae)

Comparative analysis of variability of seven microsatellite loci—Gmo3, Gmo-G12, Gmo-G18, Gmo19, Gmo34, Gmo35 and Pgmo32—was performed for the Greenland cod Gadus ogac, Pacific cod G. macrocephalus, Atlantic cod G. morhua, and White Sea cod G. morhua marisalbi. High genetic identity was observed between the Greenland cod and Pacific cod (I = 0.9520). Pair analysis of genetic differentiation was performed on the studied microsatellite loci according to θ (analogue of F _ST). The Greenland cod differed significantly from the Pacific, Atlantic, and the White Sea cod; however, the differentiation level varied. The lowest value was observed for the pair Greenland cod-Pacific cod (0.123), and the highest levels were registered for the pairs Greenland cod-Atlantic cod (0.605) and Greenland cod-White Sea cod (0.535).     

Polymorphic microsatellite loci for species of Australian freshwater cod, <Emphasis Type="Italic">Maccullochella</Emphasis>

The Australian freshwater cod genus, Maccullochella is represented by three species: Murray cod, M. peelii peelii, eastern freshwater cod, M. ikei, and trout cod, M.macquariensis. Seven novel microsatellite loci from M. ikei and six previously published loci from M. peelii peelii were tested on wild populations of Murray, eastern and trout cod. Levels of polymorphism varied between species with 13 loci polymorphic in Murray cod, 9 in trout cod and 7 in eastern cod. Observed heterozygosities ranged from 0.053 to 0.842. This suite of microsatellite loci will facilitate future studies of the genetic status of wild and hatchery bred populations of Maccullochella.     

Atlantic cod <Emphasis Type="Italic">Gadus morhua</Emphasis> (Gadiformes: Gadidae) from the Gulf of Ura: Morphobiological characteristic

Analysis of variation of biological and morphometric characteristics of cod Gadus morhua from the Gulf of Ura-a water area in the composition of Motovskii Bay of the Barents Sea was performed. The material was collected from 1999 to 2006 during spawning of the Atlantic cod. Parameters such as length, weight, sex composition, maturity stage, age, otolith structure, and variation of plastic characters were analyzed. It was shown that the Gulf of Ura, parallel to individuals of junior age groups, is inhabited by cod in the spawning state aged 5–6 months and older with coastal and Atlantic types of otolith.     

Long-term studies on genetic interaction between wild and ranched cod Gadus morhua by use of a genetic marked strain

Releases of farmed fish, whether accidental from commercial aquaculture facilities or intentional as part of stock enhancement/ranching activities, are considered to pose a risk to native gene pools. Stock enhancement studies of Atlantic cod, Gadus morhua , based on artificially produced juveniles, were initiated in 1984 in western Norway, and genetic aspects were incorporated. In order to investigate potential interbreeding between released and wild cod, a genetically marked cod strain was developed, being homozygotic for a rare allele ( GPI‐1*30 ) expressed in white muscle tissue. In the period from 1990 to 1994, juveniles from the genetic marked strain were released in large quantities in three locations (Masfjord, Øygarden, Heimarkspollen), giving a significant increase of the marker allele in the local wild cod populations. Recently, studies have been conducted in the same areas to estimate the extent of interbreeding between the wild and released cod. The results, however, revealed no permanent increase of the frequency of the marker allele and/or GPI‐1*30 heterozygotes as would be expected from interbreeding. The recent data are compared with comprehensive genetic data of the cod populations in the areas before the actual releases, covering the full period from 1994 to 2003. The present results are also discussed in relation to fishing pressure on coastal cod, migration information and reproductive success of released, genetically marked cod.     

Description of a new species of Parasesarma (Crustacea; Decapoda; Brachyura; Sesarmidae) from the Persian Gulf, based on morphological and genetic characteristics

The genera Parasesarma and Perisesarma are common inhabitants of mangroves and estuaries of the Indo-West Pacific. These, overall similar, genera of sesarmid crabs can be told apart by the presence or absence of an anterolateral tooth, but recent and ongoing studies show that they are not reciprocally monophyletic. In recent years, detailed morphological studies have revealed a surprising number of undescribed new species within these genera. In the present paper, we describe a new species of the genus Parasesarma from the relatively poorly studied Persian Gulf. So far, these specimens had been referred to as Parasesarma plicatum (Latreille, 1803), but morphological and genetic characteristics clearly allow separation of the two species. Consequently, the species from the Persian Gulf is here described as new and morphological and mitochondrial genetic characters are provided that allow recognition of the species.     

Countergradient variation in behaviour,growth and lipid storage in Atlantic cod; environmental and genetic effects

We housed offspring from northern (70° N) and southern (60° N) coastal cod (Gadus morhua) together in a ‘common garden’ rearing experiment at a temperature and light regime representative of the southern population. Through a more active feeding behaviour and a higher success, the northern cod achieved a larger food share and a higher growth rate and condition than their southern conspecifics. This is contrary to what was demonstrated by field data of fish from their natural habitats. The northern cod also allocated more energy to the liver throughout the experiment. Our results agree with the theory of countergradient variation, suggesting that genetic influences on growth and condition have been opposed by environmental constraints in their natural habitat. The observation that the offspring from these populations differ in behavior and growth when housed together support the idea that the growth response to selection would be through a behavioral response. The field data suggest that density‐dependent population process and high juvenile density relative to prey limit the growth and condition in the wild and not necessarily the length of the growth season per se as assumed in the literature. The topographic distance (over 2000 km) limit mixing of early life stages of cod from the northern and southern population, and the different environmental stimuli (seasonality, temperature, food‐web interactions and habitat heterogeneity) in north and south are likely to evolve genetic differences.     

Under-ice distribution of polar cod <Emphasis Type="Italic">Boreogadus saida</Emphasis> in the central Arctic Ocean and their association with sea-ice habitat properties

In the Arctic Ocean, sea-ice habitats are undergoing rapid environmental change. Polar cod (Boreogadus saida) is the most abundant fish known to reside under the pack-ice. The under-ice distribution, association with sea-ice habitat properties and origins of polar cod in the central Arctic Ocean, however, are largely unknown. During the RV Polarstern expedition ARK XXVII/3 in the Eurasian Basin in 2012, we used for the first time in Arctic waters a Surface and Under Ice Trawl with an integrated bio-environmental sensor array. Polar cod was ubiquitous throughout the Eurasian Basin with a median abundance of 5000 ind. km^?2. The under-ice population consisted of young specimens with a total length between 52 and 140 mm, dominated by 1-year-old fish. Higher fish abundance was associated with thicker ice, higher ice coverage and lower surface salinity, or with higher densities of the ice-amphipod Apherusa glacialis. The fish were in good condition and well fed according to various indices. Back-tracking of the sea-ice indicated that sea-ice sampled in the Amundsen Basin originated from the Laptev Sea coast, while sea-ice sampled in the Nansen Basin originated from the Kara Sea. Assuming that fish were following the ice drift, this suggests that under-ice polar cod distribution in the Eurasian Basin is dependent on the coastal populations where the sea-ice originates. The omnipresence of polar cod in the Eurasian Basin, in a good body condition, suggests that the central Arctic under-ice habitats may constitute a favourable environment for this species survival, a potential vector of genetic exchange and a recruitment source for coastal populations around the Arctic Ocean.     

Countergradient variation in body shape between two populations of Atlantic cod (Gadus morhua)

Variation in morphological traits is generally thought to be cogradient, with environmental effects on phenotypic expression reinforcing genetic differences between populations. We compared body shape between two populations of Atlantic cod (Gadus morhua). Striking shape differences occurred between juveniles from the two populations when reared in a common laboratory environment. However, no difference in body shape occurred between wild-reared juveniles from the two populations, suggesting that the genetic differences between populations were obscured by opposing effects of the environmental differences experienced in the wild. We suggest that much of the genetic diversity in body shape of fishes may be cryptic, with stabilizing selection for the same optimal phenotype resulting in genetic divergence between populations subject to contrasting environmental influences.     

Brief morphological characteristics of cod <Emphasis Type="Italic">Gadus macrocephalus</Emphasis> (Gadidae) from coastal waters of the Komandor Islands

The results of the studies on morpho-biological characteristics of Pacific cod Gadus macrocephalus of Bering Island coastal waters (Komandor Islands) are presented. As assessed by several morphometric indices, the studied cod differs from the cod of the Bering Sea.     

Characterization of new SSR‐EST markers in cod,Gadus morhua

For years, fishermen have noted that cod (Gadus morhua) within the Georges Bank Atlantic fishery spawn multiple times annually with peaks in the spring and in the fall. To evaluate the hypothesis that these differences in reproductive behaviour reflect genetically different spawning populations, we identified eight polymorphic simple sequence repeats within expressed sequence tags (ESTs). Previously, only a few genetic markers have been informative for distinguishing between cod populations of the Northwest Atlantic. The development of additional markers from ESTs will be a valuable tool to improve our understanding of population structure in this commercially important species.     

Comparative analysis of genetic variability of white sea cod (Gadus morhua marisalbi) at allozyme and microsatellite markers

Variability of cod spawning and feeding schools from Kandalaksha Bay of the White Sea, was examined at six allozyme and eight microsatellite loci. The degree of genetic differentiation at allozyme loci constituted θ = 0.36% [95% bootstrap interval 0.0458; 0.6743]. The differentiation estimates obtained using microsatellite markers were higher, θ = 1.33% [0.057; 3.11]. It was demonstrated that the level of genetic diversity in the White Sea cod was lower than that established for the Atlantic cod from Barents Sea using the same set of allozyme and microsatellite markers. The genetic data obtained support the opinion that the White Sea cod is a reproductively independent group formed as a result of the Holocene dispersal of Atlantic cod.     

Cod Gadus morhua L. populations as behavioural units: inference from time series on juvenile abundance in the eastern Skagerrak

Abundance and distribution of cod Gadus morhua in various size intervals and age groups between 2000 and 2005 were followed in coastal trawl surveys. In spite of a reduction in fishing pressure in recent years and high cod recruitment in the Skagerrak region in 2001 and 2003, no recovery could be evidenced. The survey data clearly showed that low cod density areas were not recolonized, even though abundance of juvenile cod remained high for about a year after the recruitment episodes. Increased abundance of fish >400 mm total length was only discernible at some scattered locations where other studies also have suggested local populations still to be present. The intermittent high recruitment has been linked to an inflow of egg and larvae from the North Sea, a theory which also has gained support from genetic studies. It was thus argued that the disappearance of the juvenile cod from the inshore is an effect of a migratory behaviour; the fish of offshore origin eventually leave the coast for the open Skagerrak or the North Sea. These findings support a view on cod populations as essentially behavioural entities, whereas dispersal of early life stages may be less important as a structuring mechanism.     

Evolutionary diversification of banded tube-dwelling anemones (Cnidaria; Ceriantharia; Isarachnanthus) in the Atlantic Ocean

The use of molecular data for species delimitation in Anthozoa is still a very delicate issue. This is probably due to the low genetic variation found among the molecular markers (primarily mitochondrial) commonly used for Anthozoa. Ceriantharia is an anthozoan group that has not been tested for genetic divergence at the species level. Recently, all three Atlantic species described for the genus Isarachnanthus of Atlantic Ocean, were deemed synonyms based on morphological simmilarities of only one species: Isarachnanthus maderensis. Here, we aimed to verify whether genetic relationships (using COI, 16S, ITS1 and ITS2 molecular markers) confirmed morphological affinities among members of Isarachnanthus from different regions across the Atlantic Ocean. Results from four DNA markers were completely congruent and revealed that two different species exist in the Atlantic Ocean. The low identification success and substantial overlap between intra and interspecific COI distances render the Anthozoa unsuitable for DNA barcoding, which is not true for Ceriantharia. In addition, genetic divergence within and between Ceriantharia species is more similar to that found in Medusozoa (Hydrozoa and Scyphozoa) than Anthozoa and Porifera that have divergence rates similar to typical metazoans. The two genetic species could also be separated based on micromorphological characteristics of their cnidomes. Using a specimen of Isarachnanthus bandanensis from Pacific Ocean as an outgroup, it was possible to estimate the minimum date of divergence between the clades. The cladogenesis event that formed the species of the Atlantic Ocean is estimated to have occured around 8.5 million years ago (Miocene) and several possible speciation scenarios are discussed.