The Sterol Content of Some Protozoa

SYNOPSIS. The sterols of a number of protozoa grown in axenic culture have been examined. Ergosterol is present in Polytoma uvella, Astasia ocellata, Haematococcus pluvialis, Crithidia oncopelti, Prototheca zopfii, Chilomonas paramoecium and Trypanosoma mega , all grown on sterol-free media. Ergosterol is also present in the culture form of Trypanosoma rhodesiense and occurs together with cholesterol and an unidentified sterol in Peranema trichophorum grown in the presence of cholesterol. P. uvella, A. ocellata, H. pluvialis and C. oncopelti also contain a sterol which is either spinasterol or its isomer chondrillasterol. The main sterol of Ochromonas malhamensis is probably poriferasterol, which is also present in C. paramoecium. Cholesterol, probably from the environment, is the only sterol in the blood form of T. rhodesiense. Tetrahymena pyriformis and Hartmannella rhysodes do not synthesize sterols.     

Polynucleotide Homologies of Brucella Deoxyribonucleic Acids

Deoxyribonucleic acids (DNA's) extracted from organisms presently placed in the genus Brucella (B. abortus, B. melitensis, B. neotomae, and B. suis) possessed very similar polynucleotide sequences. Unlabeled, single-stranded DNA fragments from B. abortus, B. melitensis, B. neotomae, and B. suis were equally effective in competing with the interaction of corresponding radiolabeled, single-stranded DNA fragments with their homologous DNA-agars. Unlabeled fragments of B. ovis, however, did not compete as effectively as the homologous, unlabeled DNA's, and this organism, therefore, had a detectably different polynucleotide composition. The mole percentages of guanine plus cytosine in Brucella DNA's (56 to 58%) were also similar. DNA's from Francisella tularensis, Escherichia coli, and the slow loris did not compete.     

Characterization of Deoxyribonucleic Acids from Streptomycetes and Nocardiae

The relationships among selected streptomycetes, nocardiae, and mycobacteria have been determined, based upon the base composition of their deoxyribonucleic acid (DNA) and upon the ability of their denatured DNA to anneal with single-stranded reference DNA. The streptomycetes constituted a homogeneous group whose DNA contained between 69 and 73 mole% guanine + cytosine (% GC). Moreover, the streptomycetes examined showed 37 to 88% homology with the Streptomyces venezuelae and S. rimosus reference DNA. The nocardial and mycobacterial DNA both contained 62 to 69% GC. The nocardial strains studied fell into either a 62 to 64% GC group or a 68 to 69% GC group, indicating that they should not be assigned to a single species. The nocardiae having 68 to 69% GC showed 24 to 44% homology with S. venezuelae reference DNA. In competition experiments, wherein unlabeled heterologous DNA interfered with binding of labeled homologous DNA, the nocardial DNA with 68 to 69% GC showed a greater degree of homology with the streptomycetes than did the nocardial DNA with 62 to 64% GC. In addition, the DNA from spores of S. venezuelae was cursorily examined, and interactions between S. venezuelae denatured DNA and polyribonucleotides were sought. The buoyant density of the DNA from S. venezuelae spores was distinctly less than that from mycelia. Moreover, denatured S. venezuelae DNA formed a dense complex with polyriboguanylate.     

Reassociation of Deoxyribonucleic Acids from Actinoplanes and Other Actinomycetes

The ability of deoxyribonucleic acid (DNA) isolated from a number of actinomycetes to reassociate with reference DNA from Actinoplanes philippinensis or Streptomyces venezuelae has been measured. All of the DNA preparations except for those from Nocardia erythropolis and Thermomonospora viridis contained 70 to 73 moles per cent guanine and cytosine. DNA from two species of Actinoplanes, two species of Dactylosporangium, and Ampullariella digitata formed extensive thermally stable duplexes with the Actinoplanes philippinensis reference. DNA from streptomycetes formed duplexes with the A. philippinensis reference, but these duplexes possessed low thermal stability. DNA from N. erythropolis and T. viridis did not bind significant amounts of this reference DNA. Only DNA from Streptomyces albus, Streptoverticillium baldaccii, and Microellobosporia flavea appreciably bound the Streptomyces venezuelae reference. Our results separate the actinomycetes forming sporangia into two groups: the first group contained Actinoplanes, Dactylosporangium, and Ampullariella; the second group contained Planomonospora, Spirillospora, and Streptosporangium.     

The Oscillopolarographic Behaviour of Deoxyribonucleic Acids Isolated from Bacillus Subtilis and Bacillus brevis

Summary The behaviour of DNA from several strains ofB. subtilis andB. brevis on the dropping mercury electrode in a medium of ammonium formate was studied. Native DNA yields in this medium on the oscillogram dE/dt againstE an anodic indentation for which the residues of deoxyguanylic acid are responsible.B. subtilis DNA produces a substantially smaller indentation thanB. brevis DNA does. It was found that the difference is not conditioned by impurities in the DNA samples, nor by the presence of denatured DNA. The difference in the depth of the indentation produced byB. subtilis andB. brevis DNAs almost disappears after denaturation of these DNAs or in an ammonium formate medium of higher concentration. The assumption was advanced that the different oscillopolarographic behaviour of DNAs obtained fromB. subtilis andB. brevis is connected with the different primary structure of these DNAs.     

Some Parasitic Protozoa from the Gambia

ABSTRACT. A new species of Eimeria from the fat-tailed gecko Hemidactylus brookei in Gambia, West Africa, was described and named E. helenae in honor of Mrs. Helen Levine. The oocysts averaged 22.2 μm and each contained four sporocysts (8.0 × 6.9 μ m) with two sporozoites per sporocyst. No schizogony or gametogony was discovered in the intestine, suggesting that these stages may occur in the liver or bile cannuli. The oocysts of an adeleid parasite of the insect prey of the centipede Scolopendrium morsitans were described. Plasmodium agamae, an eimeriid hemogregarine, Pirhaemocyton, and a Shellackia-type parasite were found in the blood of agamid lizards. The fruit bat Epomorphorus gambianus was commonly and heavily infected with Hepatocystis epomorphori.     

Homology Between the Deoxyribonucleic Acids of Haemophilus influenzae and Haemophilus parainfluenzae

To determine the degree of homology between deoxyribonucleic acid (DNA) from Haemophilus influenzae and that from Haemophilus parainfluenzae, the two DNAs were hybridized by the membrane-filter technique. It was found that 44% of the DNA from each species was sufficiently homologous to allow hybrid formation.     

DNA Tetrominoes: The Construction of DNA Nanostructures Using Self-Organised Heterogeneous Deoxyribonucleic Acids Shapes

The unique programmability of nucleic acids offers alternative in constructing excitable and functional nanostructures. This work introduces an autonomous protocol to construct DNA Tetris shapes (L-Shape, B-Shape, T-Shape and I-Shape) using modular DNA blocks. The protocol exploits the rich number of sequence combinations available from the nucleic acid alphabets, thus allowing for diversity to be applied in designing various DNA nanostructures. Instead of a deterministic set of sequences corresponding to a particular design, the protocol promotes a large pool of DNA shapes that can assemble to conform to any desired structures. By utilising evolutionary programming in the design stage, DNA blocks are subjected to processes such as sequence insertion, deletion and base shifting in order to enrich the diversity of the resulting shapes based on a set of cascading filters. The optimisation algorithm allows mutation to be exerted indefinitely on the candidate sequences until these sequences complied with all the four fitness criteria. Generated candidates from the protocol are in agreement with the filter cascades and thermodynamic simulation. Further validation using gel electrophoresis indicated the formation of the designed shapes. Thus, supporting the plausibility of constructing DNA nanostructures in a more hierarchical, modular, and interchangeable manner.     

The Determination of Deoxyribonucleic Acids with Triadimenol Based on the Enhancement of Resonance Light Scattering

For the first time, triadimenol was used to determine nucleic acid (DNA) using the resonance light scattering (RLS) technique. The RLS of triadimenol was greatly enhanced by DNA in the range of pH 1.6 ～ 1.9. A resonance light‐scattering peak at 310nm was found, and the enhanced intensity of RLS at this wavelength was proportional to the concentration of DNA. The linear range of the calibration curve was 0 ～ 9 µg/ml with the detection limit of 24 ng ml^? 1. The mechanism studies of the system indicated that the enhanced RLS is due to the aggregation of triadimenol on DNA. The nucleic acids in synthetic samples and in rice seedling extraction were analyzed with satisfactory results. Compared with other methods, this method is convenient, rapid, inexpensive and simple.     

Deoxyribonucleic Acid Homologies Among Some Pseudomonas Species

Phylogenetic relationships among a number of strains belonging to the genus Pseudomonas were explored by the use of in vitro deoxyribonucleic acid (DNA) hybridization. The fluorescent nomenspecies (P. fluorescens, P. putida, P. aeruginosa, P. cichorii, P. syringae, and related species), as well as the nonfluorescent species P. stutzeri, P. mendocina, P. alcaligenes, and P. pseudoalcaligenes, were shown to belong to a single DNA homology complex which is isolated from other Pseudomonas species that have been studied [P. cepacia (= P. multivorans), P. caryophylli, P. marginata (= P. alliicola), P. pseudomallei, P. acidovorans, P. testosteroni, P. solanacearum, P. diminuta, P. facilis, P. delafieldii, P. saccharophila, P. palleronii]. A limited numerical analysis of the phenotypic properties of the examined strains supported, with some exceptions, their previous allocation to nomenspecies and biotypes. The internal structure and nomenclature of the "P. fluorescens homology complex" are discussed.     

Some Physiochemical Properties of Yaba Poxvirus Deoxyribonucleic Acid

Yaba tumor poxvirus deoxyribonucleic acid (DNA) has a density of 1.6905 in CsCl and its T(m) value in 0.015 m citrate in saline is 82.3. The guanine plus cytosine content estimated from these properties was taken to be 32.5 +/- 0.5%, a value 2 to 3% less than for DNA from other poxviruses reported to date.     

An Improved Method for the Isolation of Highly Polymerized Native Deoxyribonucleic Acid from Certain Protozoa*

A relatively simple phenol extraction method, with EDTA as the nuclease inhibitor, is described for the isolation of purified, highly polymerized native DNA from Trichomonas vaginalis, Trichomonas gallinae, and Tritrichomonas foetus; it is applicable also to Tetrahymena pyriformis. RNase Tl, RNase A (Worthington's R), pronase, and α-amylase digestions constitute important steps in obtaining satisfactory yields of DNA. High degree of polymerization of the isolation product was estimated by hyperchromicity at O.D.₂₆₀ after DNase treatment and by CsCl gradient analysis. The double-stranded condition of the DNA samples was estimated by the latter method and by denaturation with NaOH, and the molecular weight by sucrose gradient analysis. Purity of the samples was determined spectrophotometrically and by chemical analyses for protein and glycogen. DNA percent recovery was estimated by the diphenylamine reaction.     

X-ray Microanalysis of the Mineral Contents of Some Protozoa

With the aid of energy-dispersive X-ray microanalysis, several protozoa were tested for content of cations within inorganic minerals. The skeleton of acantharia consists mainly of Sr with small quantities of Ca and Ba. Two Loxodes species contain nothing but Ba, while in some Remanella species Sr with small quantities of Ba were present. In one Geleia species, Ca with small quantities of Sr was found; in two Trachelocerca species from Sylt (Germany), Ba is there in addition. Another Trachelocerca species from northern Italy lacked Ba, but did possess Mn. In Prorodon only Ca was found.     

Deoxyribonucleic Acid Base Sequence Homologies of Some Budding and Prosthecate Bacteria

The genetic relatedness of a number of budding and prosthecate bacteria was determined by deoxyribonucleic acid (DNA) homology experiments of the direct binding type. Strains of Hyphomicrobium sp. isolated from aquatic habitats were found to have relatedness values ranging from 9 to 70% with strain "EA-617," a subculture of the Hyphomicrobium isolated by Mevius from river water. Strains obtained from soil enrichments had lower values with EA-617, ranging from 3 to 5%. Very little or no homology was detected between the amino acid-utilizing strain Hyphomicrobium neptunium and other Hyphomicrobium strains, although significant homology was observed with the two Hyphomonas strains examined. No homology could be detected between prosthecate bacteria of the genera Rhodomicrobium, Prosthecomicrobium, Ancalomicrobium, or Caulobacter, and Hyphomicrobium strain EA-617 or H. neptunium LE-670. The grouping of Hyphomicrobium strains by their relatedness values agrees well with a grouping according to the base composition of their DNA species. It is concluded that bacteria possessing cellular extensions represent a widely diverse group of organisms.     

Deoxyribonucleic Acid Base Composition of Some Cellular Slime Molds*

SYNOPSIS. Deoxyribonucleic acids (DNAs) isolated from 12 representatives of cellular slime molds grown in monoxenic cultures were analyzed by density gradient centrifugation in CsC1. The unique contribution of the DNA of each food organism was subtracted and the DNA base composition of each cellular slime mold determined. The guanine plus cytosine contents range 22–37 moles % within the representatives of the order. Minor bands (satellite bands) of DNA have been observed in preparations from Dictyostelium spp. and from Polysphondylium pallidum.     

Influence of Bacteriophage PBS1 and φW-14 Deoxyribonucleic Acids on Homologous Deoxyribonucleic Acid Uptake and Transformation in Competent Bacillus subtilis

Both bacteriophage PBS1 deoxyribonucleic acid (DNA) (in which all the thymine residues are replaced by uracil) and phage W-14 DNA [in which half the thymine residues are replaced by 5-(aminobutylaminomethyl)uracil or 5-putrescinylthymine] exhibit comparable competing abilities for uptake of homologous DNA in a Bacillus subtilis competent system. But, whereas PBS1 DNA leads to a decrease in transformation frequencies compatible with its competing ability for DNA uptake, W-14 DNA decreases transformation frequencies by a factor up to eightfold higher. The effect of W-14 DNA on transformation frequencies is visible even at a concentration level that does not decrease transforming DNA uptake. No such effect was observed with heterologous DNA containing presumably ionically bound putrescine. Low concentrations of W-14 DNA decreased the number of double (nonlinked) transformants more than single transformants. The influence on transformation was abolished when W-14 DNA was added 20 min after addition of transforming DNA, i.e., when the recombination process was terminated. The putrescine-containing DNA also decreased retention of trichloroacetic acid-precipitable radioactivity of homologous DNA taken up. We conclude that W-14 DNA inhibits some intracellular process(es) at the level of recombination. In addition, there is evidence that W-14 DNA, but not heterologous DNA with ionically bound putrescine, binds also to site(s) on the cell surface other than receptors for homologous DNA.     

The Mass Spectra of Thiohydantoins Derived from Some Amino Acids

One of the bound forms of vitamin B₆ occurring in rice bran was isolated in a faintly yellowish syrup by repeating ion-exchange and paper-partition chromatographic techniques. The behaviors of the isolate on thin-layer and Aminex A–5 column chromatograms were coincident with those of synthetic pyridoxine-β-d-glucoside which was obtained by Königs-Knorr condensation of α⁴,3-O-isopropylidene pyridoxine and 2,3,4,6-tetra-O-acetyl-α-d-glucopyranosyl bromide. On acid hydrolysis, the isolate gave pyridoxine and glucose. Glucose was proved to bind to the 5-hydroxymethyl group of pyridoxine, because the isolate did not react with 2,6-dichloroquinone chlorimide in the presence of boric acid. An equimolar amount of pyridoxine and d-glucose was produced with an equivalent consumption of the isolate by the action of β-glucosidase. No essential difference between the isolated and synthetic preparations could be detected in UV- and NMR-spectral features. Thus, the chemical structure of the isolate was identified as 5′-O-(β-d-glucopyranosyl) pyridoxine.