Coral and Fish Biocoenosis: Ecological Cells Gradually Maturing in Complexity, Species Composition and Energy Turnover

Long-term observations on coral units and their coral fishes, as well as observations on the growth of colonies of marked corals in the Gulf of Aqaba (Red Sea), have revealed the relationship between coral dimension and complexity and the ecomorphology and sociobiology of the inhabiting fishes. In this study, coral fishes are identified as species that, following the planktonic interval, settle and remain in a selected coral or its immediate vicinity. Parallel with growth of the refuge, the number of fishes in such a coral–fish association (=ecological cell) increases to a certain asymptote, forming a stable symbiotic entity of fish species, specific in composition and biomass. The initial cell begins with 4–5-year-old branching corals that harbors 3–4 cryptic species of gobies (Paragobiodon and Gobiodon species). This is followed by several stages of coral growth and increase in fish species and biomass, especially of pomacentrids, anthiases, pseudochromids and blennies. The water column or functional space from which the fishes harvest plankton, their main food source, starts at around a 0.2m³ column in the young colonies, and ends with a water column of around 500m³ in the mature ecological cells of large coral knolls. At the mature stage, large cells harbor up to 100 diurnal and nocturnal species of fish, permanently using this refuge and forming an integrated collective. The territorial limits of the piscivorous groupers (Cephalopholis species) generally establish the dimensions of these ecological cells. Preliminary data on standard energy metabolism of the fishes for mature ecological cells reveal that 800kg food is required each year to maintain this biomass. The biological composition and stability of fish populations of such ecological cells will depend on the biological and physical stability of the host coral population.     

昆嵛山典型植物群落生态学特性

在群落调查的基础上,采用优势度、丰富度、物种多样性、均匀度和种间相遇几率几个指标,对昆嵛山主要的天然植物群落和人工植物群落的生态学特性进行研究。结果表明不同植被类型中,灌草层物种数不同,物种的优势度和占优势的物种也各不相同;表征群落生态学特性的各个指数之间有很强的相关性,其中Shannon-Wiener指数H与其它指数的相关性最高;在以H为代表的不同层次多样性的比较中发现,不同植被类型,灌木层和草本层多样性的关系不同,但它们的平均值趋于稳定,即灌木层和草本层的物种多样性有很强的互补性;同一植被类型的不同群落间由于环境的异质性,多样性往往也不同;天然或者人工抚育强度小的4种植被类型比较,灌草层物种多样性的顺序是杂木林>赤松林>黑松林>麻栎林,在赤松林和黑松林中加入人工管理或者人工管理加强以后则变为黑松林>赤松林>杂木林>麻栎林,同时,黑松林和赤松林中乔木层的生长也受到了很大的影响,中度干扰理论在其中起了重要的作用,综合看来,对赤松林的管理达到了中度干扰的水平,而对黑松林的管理则有些过度。     

Productivity gradients cause positive diversity–invasibility relationships in microbial communities

Models predict that community invasibility generally declines with species diversity, a prediction confirmed by small‐scale experiments. Large‐scale observations and experiments, however, find that diverse communities tend to be more heavily invaded than simple communities. One hypothesis states that large‐scale environmental heterogeneity, which similarly influences native and invasive species, can cause a positive correlation between diversity and invasibility, overriding the local negative effects of diversity on invasibility. We tested this hypothesis using aquatic microbial communities consisting of protists and rotifers consuming bacteria and nanoflagellates. We constructed a productivity gradient to simulate large‐scale environmental heterogeneity, started communities with the same number of species along this gradient, and subjected equilibrial communities to invasion by non‐resident consumer species. Both invaders and most resident species increased their abundances with resource enrichment, resulting in a positive correlation between diversity and invasibility. Intraspecific interference competition within resident species and the positive effect of enrichment on the number of available resources probably accounted for the higher invasibility with enrichment. Our results provide direct experimental evidence that environmental heterogeneity in productivity can cause a positive diversity–invasibility relationship.     

Host associations and beta diversity of fungal endophyte communities in New Guinea rainforest trees

Processes shaping the distribution of foliar fungal endophyte species remain poorly understood. Despite increasing evidence that these cryptic fungal symbionts of plants mediate interactions with pathogens and herbivores, there remain basic questions regarding the extent to which dispersal limitation and host specificity might shape fungal endophyte community composition in rainforests. To assess the relative importance of spatial pattern and host specificity, we isolated fungi from a sample of mapped trees in lowland Papua New Guinea. Sequences of the internal transcribed spacer (ITS) region were obtained for 2079 fungal endophytes from three sites and clustered into molecular operational taxonomic units (MOTUs) at 95% similarity. Multivariate analyses suggest that host affinity plays a significant role in structuring endophyte community composition whereas there was no evidence of endophyte spatial pattern at the scale of tens to hundreds of metres. Differences in endophyte communities between sampled trees were weakly correlated with variation in foliar traits but not with tree species relatedness. The dominance of relatively few generalist endophytes and the presence of a large number of rare MOTUs was a consistent observation at three sites separated by hundreds of kilometres and regional turnover was low. Host specificity appears to play a relatively weak but more important role than dispersal limitation in shaping the distribution of fungal endophyte communities in New Guinea forests. Our results suggest that in the absence of strong ecological gradients and host turnover, beta diversity of endophyte communities could be low in large areas of contiguous forest.     

Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis

Symbiotic bacteria often help their hosts acquire nutrients from their diet, showing trends of co-evolution and independent acquisition by hosts from the same trophic levels. While these trends hint at important roles for biotic factors, the effects of the abiotic environment on symbiotic community composition remain comparably understudied. In this investigation, we examined the influence of abiotic and biotic factors on the gut bacterial communities of fish from different taxa, trophic levels and habitats. Phylogenetic and statistical analyses of 25 16S rRNA libraries revealed that salinity, trophic level and possibly host phylogeny shape the composition of fish gut bacteria. When analysed alongside bacterial communities from other environments, fish gut communities typically clustered with gut communities from mammals and insects. Similar consideration of individual phylotypes (vs. communities) revealed evolutionary ties between fish gut microbes and symbionts of animals, as many of the bacteria from the guts of herbivorous fish were closely related to those from mammals. Our results indicate that fish harbour more specialized gut communities than previously recognized. They also highlight a trend of convergent acquisition of similar bacterial communities by fish and mammals, raising the possibility that fish were the first to evolve symbioses resembling those found among extant gut fermenting mammals.     

Genetic variation in a tropical tree species influences the associated epiphytic plant and invertebrate communities in a complex forest ecosystem

Genetic differences among tree species, their hybrids and within tree species are known to influence associated ecological communities and ecosystem processes in areas of limited species diversity. The extent to which this same phenomenon occurs based on genetic variation within a single tree species, in a diverse complex ecosystem such as a tropical forest, is unknown. The level of biodiversity and complexity of the ecosystem may reduce the impact of a single tree species on associated communities. We assessed the influence of within-species genetic variation in the tree Brosimum alicastrum (Moraceae) on associated epiphytic and invertebrate communities in a neotropical rainforest. We found a significant positive association between genetic distance of trees and community difference of the epiphytic plants growing on the tree, the invertebrates living among the leaf litter around the base of the tree, and the invertebrates found on the tree trunk. This means that the more genetically similar trees are host to more similar epiphyte and invertebrate communities. Our work has implications for whole ecosystem conservation management, since maintaining sufficient genetic diversity at the primary producer level will enhance species diversity of other plants and animals.     

The implications of palaeontological evidence for theories of ecological communities and species richness

Abstract Palaeontological evidence raises several questions that relate to current explanations of ecological communities, to the classification of communities and to interpretations of species richness. The first question relates to the stability of species detected in the fossil record. Coupled with that is the issue of incidental association of species on the same trophic level through differential effects of climatic change on the different species. Such observations are seen to support the ‘individualistic’ concept of communities. Recent statements about this concept leave unresolved questions about the acquisition of adaptation, and about the place of adaptation theory in theories of ecological communities and interpretations of ‘regional species richness’. At issue is whether there is justification for continuing to classify communities as a basis for understanding them. There is good reason to reject this approach for one in which questions about communities and ‘local’ and ‘regional’ species richness are replaced by more specific and basic questions about the relationship between adaptation, distribution and abundance, and ecological interactions. Some recent efforts to incorporate species theory into community theory fail because their basis remains the flawed concept of ‘local community’.     

Phylogenetic definitions and taxonomic philosophy

An examination of the post-Darwinian history of biological taxonomy reveals an implicit assumption that the definitions of taxon names consist of lists of organismal traits. That assumption represents a failure to grant the concept of evolution a central role in taxonomy, and it causes conflicts between traditional methods of defining taxon names and evolutionary concepts of taxa. Phylogenetic definitions of taxon names (de Queiroz and Gauthier 1990) grant the concept of common ancestry a central role in the definitions of taxon names and thus constitute an important step in the development of phylogenetic taxonomy. By treating phylogenetic relationships rather than organismal traits as necessary and sufficient properties, phylogenetic definitions remove conflicts between the definitions of taxon names and evolutionary concepts of taxa. The general method of definition represented by phylogenetic definitions of clade names can be applied to the names of other kinds of composite wholes, including populations and biological species. That the names of individuals (composite wholes) can be defined in terms of necessary and sufficient properties provides the foundation for a synthesis of seemingly incompatible positions held by contemporary individualists and essentialists concerning the nature of taxa and the definitions of taxon names.     

Environmental heterogeneity among lakes promotes hyper β‐diversity across phytoplankton communities

相似文献   

Ecological units: definitions and application

Concepts of ecological units, such as population, community, and ecosystem, are at the basis of ecological theory and research and have increasingly become the focus of conservation strategies. Concepts of these units still suffer from inconsistencies and confusions over terminology. The different concepts are treated here together as a common "conceptual cluster," with similar ecological functions (roles) and similar problems in their definition and use. An analysis of the multitude of existing terms and concepts that have been developed for these units reveals that they differ with respect to at least four basic criteria: (i) the questions as to whether they are defined statistically or via a network of interactions; (ii) if their boundaries are drawn by topographical or process-related criteria; (iii) how high the required internal relationships are; and (iv) if they are perceived as "real" entities or abstractions by an observer The various definitions cannot be easily sorted into just a few types, but they can be characterized by several independent criteria. I argue that serious problems arise if the different possibilities of defining ecological units are not recognized and if the concepts are perceived as self-evident. The different concepts of ecological units should be defined and used in a philosophically informed manner I propose a dual approach to the use of ecological units. Generic meanings of the main concepts (especially population, community, and ecosystem) should be retained only as heuristically useful perspectives, while specific and "operational" definitions of the concepts as units should be developed, depending on specific purposes of their use. Some thoughts on the basic requirements for such definitions and the domains of their uses are briefly explained.     

贵州百里杜鹃风景区旅游干扰对杜鹃群落特征的影响

为揭示旅游干扰对于百里杜鹃风景区杜鹃群落特征影响,选取杜鹃纯林和杜鹃混交林两种杜鹃群落,分析干扰对群落结构及物种多样性的影响。采用典型抽样的方法进行样地设置和调查,通过旅游影响系数分析样地旅游干扰等级,并分析对比了不同旅游干扰程度和干扰方式对群落特征的影响。研究表明：1）百里杜鹃景区共有植被67科102属130种,其中杜鹃纯林共有植被97种,以马缨杜鹃、箭竹和露珠杜鹃为优势物种,杜鹃混交林共有植被115种,以马缨杜鹃、露珠杜鹃和映山红为优势种;2）两种杜鹃群落均在中等干扰水平时具有最高的Berger-Parker丰富度指数和Shannon多样性指数,中度干扰一定程度上促进了杜鹃群落物种多样性增加,不同的是两种群落的Shannon指数变化趋势不同,在杜鹃纯林中表现为中度干扰>轻度干扰>重度干扰,而在杜鹃混交林中中度干扰>重度干扰>轻度干扰,相较于杜鹃纯林,杜鹃混交林物种更为丰富,在旅游干扰下生物多样性更为稳定,抗干扰能力更强,而杜鹃纯林受旅游干扰波动显著;3）垃圾指数、踩踏指数与杜鹃混交林物种多样性指数、群落生长结构无明显相关性,而垃圾指数与杜鹃纯林Shannon多样性指数、物种数以及草本均高呈显著负相关,踩踏指数与杜鹃纯林灌木层高度、盖度呈现极显著负相关,与草本均高呈显著正相关;4）各杜鹃群落对旅游干扰有不同响应,为保持杜鹃群落稳定性,应在花季适当分流,严格控制杜鹃纯林的重度干扰。     

Taxonomic problems with the species Keratella hiemalis

Keratella hiemalis was described by Carlin (1943) from Motalaström in southern Sweden. It was distinguished from K. quadrata by its low morphological variability and its occurrence at only low temperatures. Morphological characteristics are: straight lateral borders of carapace and spines, caudal spines of medium length, and triangular, first median facet. The species has been found by many authors in the hypolimnion of oligotrophic lakes. Some workers have applied the name Hiemalis to a similarly-sized species, K. testudo. This species occurs in high mountain and arctic pools and displays substantial morphological variability.Deceased.     

Species–energy relationships and habitat complexity in bird communities

Species–energy theory is a commonly invoked theory predicting a positive relationship between species richness and available energy. The More Individuals Hypothesis (MIH) attempts to explain this pattern, and assumes that areas with greater food resources support more individuals, and that communities with more individuals include more species. Using a large dataset for North American birds, I tested these predictions of the MIH, and also examined the effect of habitat complexity on community structure. I found qualitative support for the relationships predicted by the MIH, however, the MIH alone was inadequate for fully explaining richness patterns. Communities in more productive sites had more individuals, but they also had more even relative abundance distributions such that a given number of individuals yielded a greater number of species. Richness and evenness were also higher in structurally complex forests compared to structurally more simple grasslands when controlling for available energy.     

Early onset of secondary extinctions in ecological communities following the loss of top predators

The large vulnerability of top predators to human-induced disturbances on ecosystems is a matter of growing concern. Because top predators often exert strong influence on their prey populations their extinction can have far-reaching consequences for the structure and functioning of ecosystems. It has, for example, been observed that the local loss of a predator can trigger a cascade of secondary extinctions. However, the time lags involved in such secondary extinctions remain unexplored. Here we show that the loss of a top predator leads to a significantly earlier onset of secondary extinctions in model communities than does the loss of a species from other trophic levels. Moreover, in most cases time to secondary extinction increases with increasing species richness. If local secondary extinctions occur early they are less likely to be balanced by immigration of species from local communities nearby. The implications of these results for community persistence and conservation priorities are discussed.