共查询到18条相似文献,搜索用时 79 毫秒
1.
2.
3.
我国研制出新型DNA逻辑门奠定发展DNA计算机基础 总被引:1,自引:0,他引:1
中科院上海应用物理研究所的樊春海研究员与上海交通大学Bio-X中心的贺林院士、张治洲教授通过学科交叉研究与合作,应用DNA核酶研制成功一类新型的“DNA逻辑门”,为发展DNA计算机奠定了基础。DNA核酶是一种通过体外进化筛选出来的具有特定酶活性的核酸结构,在该项研究中采用的是具有DNA水解酶活性的DNA核酶。这种具有锤头状结构的核酶可以在铜离子辅助下催化氧化并切割底物DNA。DNA逻辑门即是在这种DNA核酶结构基础上通过模块设计(modular design)研制出来的。输入信号通过特定的生物分子传感可以产生输出信号,从而实现“YES”、“NOT”等逻辑判断,并可以组合成复杂的三输入逻辑门“AND(A,NOT(B),NOT(C))”。该逻辑门系统的新特色在于排除以往DNA逻辑门设计中RNA核苷的参与,仅单纯应用DNA分子,从而避免了RNA核苷带来的系统不稳定性。相关研究结果已发表在2006年3月出版的著名化学杂志((Angew.Chem.Int.Ed.》上。 相似文献
4.
5.
利用可视化分析软件,客观、全面地展示和分析适体的研究现状、研究热点和发展趋势,为适体的研究提供指导和参考。以SCI数据库Web of Science平台为数据源,采用CiteSpace 5.5.R2软件对1900年1月1日至2020年12月31日的适体相关文献进行分析。共纳入文献14 939篇。在该领域发表论文最多的作者是WEIHONG TAN、KHALIL ABNOUS等;近年来突现的主题词是“wide linear range”“pg ml”“clinical diagnosis”“early diagnosis”等,是目前该领域的研究热点;作者共被引分析和文献共被引分析表明,该领域的研究主要集中在适体的体外筛选、适体构象的变化、适体在药物靶向治疗中的应用及适体生物传感器。结果表明,利用CiteSpace软件对Web of Science数据库中已发表的适体文献进行分析,揭示了该领域的研究热点从体外筛选和适体构象变化(1992—2002)到适体在药物靶向治疗和适体生物传感器中的应用(2002—2020)。结合近年来突现的主题词预测适体在药物靶向治疗和适体生物传感器中的应用仍将是未来的研究热点。 相似文献
6.
适体酶是从寡核苷酸随机序列库中筛选获得的针对各种效应分子的一种新的人工合成酶.它具有适体的特异性和核酶的催化活性.适体酶作为催化分子信标,为效应分子的定量分析提供了新的思路.适体酶不仅在基因组学和蛋白质组学中应用,而且在生物传感器和DNA分子逻辑研究中具有潜在的应用前景. 相似文献
7.
8.
以凝血酶适体(aptamer)为例,利用适体和核酸外切酶特性,通过定量PCR扩增建立一种高灵敏的蛋白质检测方法.首先合成3段寡核苷酸序列即凝血酶适体探针,上游连接子和下游连接子.将适体探针与凝血酶温育结合后,再加入核酸外切酶I降解未能结合的探针.接着将保护下来的探针与连接子杂交、连接和对连接产物进行定量PCR .分别建立连接产物标准品浓度与Ct 值的标准曲线和凝血酶浓度与连接产物浓度的标准曲线,通过定量PCR对凝血酶进行定量.结果显示,基于适体的外切酶保护凝血酶检测方法灵敏度较高,连接产物标准品浓度的对数值和Ct 值之间的方程为y =- 2 95x + 33 6 5 (R2 =0. 990 ,P <0 .0 1) ;凝血酶浓度和连接产物浓度对数值之间的方程为y =0 94x - 0 . 2 9(R2 =0 . 998,P <0 . 0 1) ,还对可能影响检测的有关参数举行了探讨. 相似文献
9.
10.
桔青毒素(citrinin,CTN)是以玉米、谷物、奶酪等为主要成分的食品和动物饲料中常见的、由桔青霉菌产生的酮类真菌毒素,可引起人和动物的慢性中毒或癌症,一直缺少灵敏的快速检测方法。本文通过指数富集适体系统进化技术(简称SELEX)对可能与CTN结合的特异性适体进行了筛选,经过15轮循环,得到17条适体。通过二级结构分析、亲和力检测发现适体13(Apt-13)对CTN有较好的亲和度,解离常数Kd为0.06μmol/L。进一步利用非荧光标记染料PicoGreen,利用其与双链DNA结合的原理,建立了桔青毒素非标记荧光检测方法,30min完成检测,最低检测限达到国家标准(50ppb)且与其他毒素无交叉反应。本研究建立的基于适体的桔青毒素检测技术成本低,可以替代传统的基于抗体的检测方法,为霉菌毒素的精准检测技术的开发提供了实验证据。 相似文献
11.
Gold Nanoparticle Based FRET for DNA Detection 总被引:1,自引:0,他引:1
Paresh Chandra Ray Gopala Krishna Darbha Anandhi Ray Joshua Walker William Hardy 《Plasmonics (Norwell, Mass.)》2007,2(4):173-183
The nanoscience revolution that sprouted throughout the 1990s is having great impact in current and future DNA detection technology
around the world. In this review, we report our recent progress on gold nanoparticle based fluorescence resonance energy transfer
assay to monitor DNA hybridization as well as the cleavage of DNA by nucleases. We tried to discuss a reasonable account of
the science and the important fundamental work carried out in this area. We also report the development of a compact, highly
specific, inexpensive and user-friendly optical fiber laser-induced fluorescence sensor based on fluorescence quenching by
nanoparticles to detect single-strand DNA hybridization at femtomolar level. 相似文献
12.
DNA is increasingly being used as an ideal material for the construction of nanoscale structures, circuits, and machines. Toehold-mediated DNA strand displacement reactions play a very important role in these enzyme-free constructions. In this study, the concept of metallo-toehold was utilized to further develop a mechanism for strand displacement driven by Ag+ ions, in which the intercalation of cytosine–cytosine mismatched base pairs on the toeholds provides additional control by varying of the concentration of Ag+ ions. The characteristics of displacement reaction in response to different concentration of Ag+ ions are investigated by fluorescence spectral and non-denaturing polyacrylamide gel electrophoresis. The reaction can successfully occur when the concentration of Ag+ ions is suitabe; excess Ag+ ions block the reaction. Furthermore, the displacement reaction can be tuned and controlled most efficiently under the condition of two C:C mismatched base pairs placed on the six-nt toehold. Based on our research, a mechanism was developed to construct Boolean logic gate AND and OR by employing strand displacement reaction as a tool, Ag+ and Hg2+ as input. 相似文献
13.
Spiridonova V. A. Rog E. V. Dugina T. N. Strukova S. M. Kopylov A. M. 《Russian Journal of Bioorganic Chemistry》2003,29(5):450-453
The formation of complexes between various thrombin preparations and 30-mer aptamer DNA was comparatively studied, and a correlation between the complex formation and the fibrinogen-hydrolyzing activity of thrombin was found. The aptamer DNA was shown to inhibit the formation of fibrin from fibrinogen. 相似文献
14.
Hiroki Yasuga Ryuji Kawano Masahiro Takinoue Yutaro Tsuji Toshihisa Osaki Koki Kamiya Norihisa Miki Shoji Takeuchi 《PloS one》2016,11(2)
Logical operations using biological molecules, such as DNA computing or programmable diagnosis using DNA, have recently received attention. Challenges remain with respect to the development of such systems, including label-free output detection and the rapidity of operation. Here, we propose integration of biological nanopores with DNA molecules for development of a logical operating system. We configured outputs “1” and “0” as single-stranded DNA (ssDNA) that is or is not translocated through a nanopore; unlabeled DNA was detected electrically. A negative-AND (NAND) operation was successfully conducted within approximately 10 min, which is rapid compared with previous studies using unlabeled DNA. In addition, this operation was executed in a four-droplet network. DNA molecules and associated information were transferred among droplets via biological nanopores. This system would facilitate linking of molecules and electronic interfaces. Thus, it could be applied to molecular robotics, genetic engineering, and even medical diagnosis and treatment. 相似文献
15.
16.
17.
近年来,随着DNA计算研究的深入,基于DNA的布尔电路的模拟成为其中一个热门的研究方向.分子信标是一种特殊的探针分子,广泛应用于各种生物技术的检测方面,具有结果稳定,特异性强的优点,本文提出了一种基于诱导"发夹"形式的DNA与非门模型,和已有的模型相比,该模型具有简单,可靠性更高且可以重复使用等优点. 相似文献
18.
Altogether, we have identified a novel method for the detection of SRAS-CoV-2 N protein using DNA based aptamers. Although the aptamers used in this study were designed based on an aptamer previously selected for SARS-CoV N protein, they bind to SRAS-CoV-2 N protein with a high affinity. Most importantly, SARS-CoV-2 N protein shares very low similarity (16%–38%) with N protein from other five known human coronaviruses except for SARS-CoV. Because there are no SARS-CoV cases reported since 2004, our aptamer-based method can be used as a supplementation to the current diagnosis of SARS-CoV-2. 相似文献