甘草属种间杂交种叶绿体DNA父系遗传的发现及分析

通过对甘草属乌拉尔甘草(Glycyrrhiza uralensis)、光果甘草(G.glabra)、胀果甘草(G.inflata)及其人工杂交种组合G.uralensis♀×G.glabra♂、G.glabra♀×G.uralensis♂、G.uralensis♀×G.inflata♂、G.inflata♀×G.uralensis♂共68份材料的核基因ITS序列、叶绿体rbc L、mat K、trn H-psb A基因的序列分析,探讨了甘草属叶绿体DNA遗传方式。结果表明:(1)亲本种和人工杂交种ITS序列长度均为614 bp,其中34份人工杂交种ITS序列存在4处变异位点,且人工杂交种均检测出来自父本、母本ITS序列相同位点碱基的叠加,检测率为100%。(2)亲本种与人工杂交种的叶绿体基因rbc L、mat K、trn H-psb A序列长度相同,共有4处变异位点,人工杂交种在变异位点处的碱基与其相对应的父本碱基一致率高达97.1%。以上结果说明,该研究获得34份人工杂交种为100%杂交成功的F_1子代,核基因ITS序列可用于甘草属杂交种的遗传鉴定;甘草属叶绿体rbcL、mat K、trn H-psb A基因具有父系遗传特性,推测甘草属质体的遗传方式主要表现为父系遗传,这种质体遗传方式的发现为甘草属杂交种和遗传多样性研究提供了新的认识,也为杂交种的亲本鉴定提供分子依据。     

4种红豆杉属植物遗传多样性和遗传关系的RAPD分析

采用RAPD标记研究了分属于4种红豆杉属(Taxus Linn.)植物的68个单株的遗传多样性,并采用UPGMA方法分析68个单株的遗传关系.结果表明:12条RAPD引物共扩增出109条带,其中多态性条带108条,多态性条带百分率为99.1％;平均每条引物扩增出9.1条带.南方红豆杉[T.wallichiana var.mairei (Lemée et Lévl)L.K.Fu et Nan Li.]种内的多态性条带百分率和观察等位基因数均最高;欧洲红豆杉(T.baccata Linn.)种内的有效等位基因数、Nei's基因多样度和Shannon's信息指数均最高;须弥红豆杉(T.wallichiana Zucc.)种内的各项遗传多样性指数均最低.供试4种植物的种内遗传多样度、种间遗传多样度、基因流和种间遗传分化系数分别为0.1745、0.358 6、0.401 7和0.554 5,表明55.45％的遗传变异发生在种间.南方红豆杉和须弥红豆杉遗传距离最近;曼地亚红豆杉(Taxus×media Rehd.)和须弥红豆杉的遗传距离最远.通过聚类分析可将68个单株分为3组,欧洲红豆杉的18个单株和曼地亚红豆杉的18个单株分别各自聚为1组;须弥红豆杉的16个单株和南方红豆杉的16个单株聚为1组,其中须弥红豆杉的16个单株和南方红豆杉的16个单株又各自聚为1个亚组,且南方红豆杉的雌、雄单株也分别聚在同一分支上,表明须弥红豆杉和南方红豆杉遗传关系较近,而欧洲红豆杉与其他3种植物的遗传关系较远.     

苍术属药用植物水溶性化学成分及其药理活性的研究进展

药用植物包括苍术,关苍术等,其水溶性化学成分包括糖苷,糖类,氨基酸等;药理活性包括肠道免疫作用,降血糖,降血压,免疫调节,抗衰老等。对其水溶性化学成分和药理活性进行综述,为进一步开发利用提供依据。     

鲂属团头鲂、三角鲂及广东鲂种间遗传关系及种内遗传差异

采用形态判别、同工酶分析和RAPD分析相结合的方法,从3个层次研究分析了鲂属团头鲂、三角鲂和广东鲂的种间亲缘关系和种内遗传差异。结果表明：（1）3种鲂在形态可数性状上差异不显著,而可量性状与框架分析揭示团头鲂与三角鲂亲缘关系较近,它们同广东鲂差异较大;（2）团头鲂和三角鲂均具有MDH同工酶的s-Mdh-D位点,而广东鲂未见,引物S11扩增的结果在3种鲂间均显示种的特异性,这些同工酶谱带和DNA扩增带可作为3种鲂的种间分子标记;（3）3种鲂种间亲缘关系在三个研究层面上相互吻合：即广东鲂和头鲂、三角鲂差异较大,亲缘关系较远,而三角鲂和团头鲂之间差异小,亲缘关系较近;（4）同工酶和RAPD分析揭示,三角鲂种内遗传多样性显著地高于广东鲂和团头鲂。     

苍术DNA分离及RAPD遗传多样性分析

用新鲜的或－７５℃保存的苍术〔Ａｔｒａｃｔｙｌｏｄｅｓｌａｎｃｅａ（Ｔｈｕｎｂ．）ＤＣ．〕叶片提取ＤＮＡ,产量分别为４０ｎｇ／ｍｇ鲜重和１０ｎｇ／ｍｇ鲜重左右,分离出的ＤＮＡ的ＯＤ２６０／ＯＤ２８０值均大于１９,可用于ＲＡＰＤ试验。用８种引物对苍术４个居群的ＤＮＡ进行扩增,单个１０碱基的引物扩增出的ＲＡＰＤ标记在１～１５之间,多态位点百分率南苍术为４７５０％,北苍术为４５４０％,遗传相似度值南苍术为０８５,北苍术为０８７。结果表明,南苍术的遗传多样性略高于北苍术。     

用RAPD分子标记探讨沙拐枣属的种间关系

利用随机扩增多态性DNA（RAPD）技术分析了14种沙拐枣属（Calligonum L.)植物,通过对16个Sangon公司十聚体随机引物进行PCR扩增,3个引物能产生多态性带。对3个引物扩增产生的45条扩增产物,计算单匹配系数,应用UPGMA方法构建亲缘关系树状图。分析结果表明：（1）物种间遗传差异明显,具有丰富的遗传多样性;（2）14种沙拐枣属植物明显聚为4类,与传统的形态学分类结果基本一致。     

利用叶绿体DNA trnL-F序列初步探讨菊科风毛菊属的系统发育

风毛菊属Saussurea DC.是菊科物种分化十分剧烈和分类处理十分困难的一个属。该属的单系起源性质、属下分类系统以及一些独特形态物种的系统位置尚不清楚,有待进一步验证。本文测定了代表该属5个亚属37种植物43个样品和川木香属Dolomiaea DC.的１种样品的叶绿体DNA trnL-F序列,并调取菜蓟族Cardueae Cass.与风毛菊属具有一定亲缘关系的13属的该序列,一起进行了分支分析,重点验证该属的属下形态分类系统以及形态特殊、青藏高原地区特有的雪兔子亚属subgen. Eriocoryne     

忍冬属植物的遗传多样性及其种间关系研究

应用RAPD标记技术对甘肃省境内的23种忍冬属(Lonicera Linn．)植物的遗传多样性及其种间关系进行了探讨。从34个随机引物中共选出9个多态性和重复性较好且谱带清晰的引物,这9个引物扩增出的DNA片段大多在300～3000bp之间,所形成的多态性位点数差距较大。POPGENE 1．31软件分析结果表明：甘肃省忍冬属植物具有较为丰富的遗传多样性,其多态性比率为71．93％,Shannon多样性指数与Nei指数分别为0．3230和0．2086。Nei‘s遗传距离和UPGMA分析结果显示,23种忍冬明显地聚为2大类,其下又有较多分支,即隶属于同一亚组或相近亚组的不同种基本归为一类,其种间关系与传统的形态学分类结果基本一致。但也有个别种的归属及种间关系稍有变化,如形态学上差异较大的毛药忍冬和毛花忍冬在本研究中聚在一起。这可能与不同的分类水平有关。     

基于叶绿体DNA atpB-rbcL区序列探讨石蒜属种间系统发育关系

摘要：为了探讨石蒜属（Lycoris Herb.）的种间系统发育关系,对石蒜属95个材料包括15种、4变种及2个人工杂种的叶绿体 DNA atpB-rbcL间隔区进行了测序,结合花部形态和核型特征,探讨了石蒜属种间系统关系及其可能的杂交起源,结果表明：在系统发育树上亲缘关系近的材料聚在一起,其中矮小石蒜（L. radiata var. pumila）和换锦花（L. sprengeri）与2个人工杂交种（Hybrid 1、Hybrid 2）、麦秆石蒜（L. straminea）、江苏石蒜（L. houdyshelii）、短蕊石蒜（L. caldwellii）和乳白石蒜（L. albiflora）具有密切的亲缘关系。atpB-rbcL序列揭示的石蒜属种间关系与染色体核型的分类结果部分一致,主要表现在具有近端部着丝粒(A)染色体的种与具有中部(M)和端部(T)着丝粒染色体的种各成一支,与形态和染色体分类结果一致;不同之处在于具有中部、端部和近端部着丝粒染色体的种分散在两个主要分支内,进一步验证了具有中部、端部和近端部3种着丝粒类型染色体组的石蒜如麦秆石蒜、江苏石蒜、短蕊石蒜和乳白石蒜等是杂交起源的假设,结合2个人工杂交种分析,揭示了短蕊石蒜和乳白石蒜的近端部着丝粒染色体来源于换锦花;麦秆石蒜和江苏石蒜近端部着丝粒染色体来源于矮小石蒜。     

四种栎属青冈亚属植物叶绿体基因组特征及系统发育研究

栎属青冈亚属植物的系统发育地位长期存在着争议，部分种的种间关系不明确。为揭示宁冈青冈(Quercus ningangensis)、曼青冈(Q.oxyodon)、毛曼青冈(Q.gambleana)、竹叶青冈(Q.neglecta)的叶绿体基因组特征及系统发育关系，该研究选择以上4种栎属青冈亚属植物的成熟叶片进行二代测序，对其叶绿体基因组结构和特征进行分析，并结合相关类群进行系统发育研究。结果表明：(1)宁冈青冈、曼青冈、毛曼青冈、竹叶青冈的叶绿体基因组序列长度分别为160 906、160 883、160 832、160 784 bp,均编码133个基因，包括88个蛋白质编码基因、37个tRNA基因、8个rRNA基因。(2)4种栎属青冈亚属植物偏好以A/T结尾的密码子，质体基因组变异区域主要存在于非编码序列。(3)通过IR边界分析得出，4种栎属青冈亚属植物存在ycf1假基因且在IRb/SSC区域发生扩张。(4)系统发育分析显示，在壳斗科中，水青冈属(Fagus)和轮叶三棱栎属(Trigonobalanus)较早分化出来，栎亚属(subg.Quercus)未形成一个单系群，叶绿体基因组建树结...     

基于ITS和trnL-F序列碱基差异的繁缕及其近缘种的亲缘关系分析

应用PCR产物直接测序法分析了繁缕[Stellaria media(L.)Villars]及其近缘种和鹅肠菜[Myosoton aquaticum (L.)Moench]的ITS和trnL-F序列的碱基差异,并以孩儿参[Pseudostellaria heterophylla(Miq.)Pax]为外类群构建N-J系统树,分析了这些种类的种间亲缘关系.结果表明,供试的繁缕属(Stellaria L.)种类及鹅肠菜的ITS和trnL-F序列长度分别为521～784和788～951 bp,各有变异位点77和59个,其中信息位点分别为18和11个,种间碱基差异百分率分别为6.5%和3.1%.ITS的碱基组成为A 22.1%、T20.9%、G 28.5%和C 28.5%,G+C含量57.0%;trnL-F的碱基组成为A 35.9%、T 33.7%、G 15.7%和C 14.8%,G+C含量30.5%.繁缕、雀舌草(S.alsine Grimm)和箐姑草(S.vestita Kurz)的ITS和trnL-F序列一致;鹅肠菜的ITS序列中有4个位点与前述种类不同,但trnL-F序列则相同;中国繁缕(S.chinensis Regel)的ITS和trnL-F序列与孩儿参较相似.在N-J系统树中,鹅肠菜与繁缕、雀舌草和箐姑草聚为一支,表明它们的亲缘关系相对较近,支持将鹅肠菜重新归入繁缕属的分类处理.研究结果显示,ITS和trnL-F序列分析均可用于繁缕及其近缘种的鉴别,且ITS是更为适宜的分子标记.     

拟南芥属的系统位置：种皮及分子证据

拟南芥属（Arabidopsis（L.）Heynhold）拥有现代分子生物学研究的模式植物拟南芥（A.thaliana（L.）Heynhold）,但其属的系统位置及与近缘属关系争议较大。根据对拟南芥属及其相关属种的种皮微形态观察,结合测定分析各属种叶绿体DNA的trnL内含子和trnL-F基因间隔区序列,结果表明,拟南芥属的近缘属种包括荠属（Capsella Medic.）、亚麻荠属（Camelina（L.）Crantz）、须弥芥属（Crucihimalaya Al-Shehbaz et al.）、无苞芥属（Olimarabidopsis Al-Shehbaz et al.）、旗杆芥属（Turritis L.）、南芥属（Arabis L.）和糖芥属（Erysimum Kitagawa）。     

Interspecific relationships of Caragana microphylla,C. davazamcii and C. korshinskii (Leguminosae) based on ITS and trnL-F data sets

The taxonomic treatment of Caragana davazamcii Sancz. has been a controversial matter, as its relationship with C. microphylla Lam. and C. korshinskii Kom. is not clear. It was treated as an independent species, or a variety under C. microphylla or C. korshinskii. This study is to examine the interspecific relationship of these three species and the origin of C. davazamcii based on internal transcribed spacer (ITS) and non-coding region of chloroplast trnL-F, combined with morphological data and geographical distribution. The trnL-F sequence of C. davazamcii is identical to that of C. microphylla but differs distinctly from that of C. korshinskii. The high congruence of ITS copies through both direct and cloning sequencing rejects the recent hybridization hypothesis of C. davazamcii between C. microphylla and C. korshinskii. In contrast, two different ITS sequence copies were found respectively in each individual of C. microphylla and C. korshinskii. One of the two ITS sequences in C. microphylla is identical to that of C. davazamcii. This result indicates that C. davazamcii might have taken part in the hybridization of C. microphylla as one parent , or that extensive gene flow might have occurred between these two species, thus resulting in the morphological similarity of them. However, the similarity of some morphological characters of C. davazamcii to those of C. korshinskii might result from the convergent adaptation to their common ecological environment.     

Systematic Position of Allium macrostemon Based on nrDNA ITS and cpDNA trnL-F Sequence Data

Allium macrostemon is an important medicinal and edible plant. Its systematic position and taxonmical classification remain controversial to date. To explore this issue, we reconstructed phylogenetic relationships among Amacrostemon and other related taxa using nrDNA ITS and cpDNA trnL F markers. The phylogenetic trees derived from Bayesian inference and maximum parsimony analysis showed that Amacrostemon is monophyletic, and has a close relationship with some species of polyphyletic sections Caerulea and Pallasia instead of sections Codonoprasum and Allium. The including of Amacrostemon within section Allium was not supported by both molecular data and morphological characters of spathe, filaments and ovary. Allium macrostemon should be included in a new section, however further studies using additional samples (especially those from Central Asia) is necessary. In addition, we also provided a discussion on the phylogenetic relationships among four original plants (Amacrostemon, Achinense, Acaeruleum and Aneriniflorum) of Allii Macrostemonis Bulbus and systematic position of partial species of section Pallasia.     

基于种皮形态和叶绿体trnL-F对菘蓝属（十字花科）的系统学位置研究

利用种皮微形态观察与叶绿体DNA的trnL内含子和trnL-F基因间隔区序列测定分析相结合,对十字花科菘蓝属植物及其相关属种的系统学关系进行了探讨.研究结果表明原属独行菜族的菘蓝属植物,其种皮特征与原属鸟头荠族的舟果荠属植物相似,同属一类型.而与独行菜族的模式属独行菜属植物、大蒜芥族的模式属大蒜芥属植物以及鸟头荠族的模式属鸟头荠属植物种皮微形态差异显著;在基于叶绿体DNA的trnL内含子和trnL-F基因间隔区序列所构建的系统发育树中,菘蓝属植物与舟果荠属植物距离最近,而与独行菜属、大蒜芥属、鸟头荠属植物具有一定的间隔,结合形态特征,本研究认为,菘蓝属与舟果荠属植物具有较近的亲缘关系,而不是同族的独行菜属植物.     

Phylogenetic analysis of Eremurus,Asphodelus, and Asphodeline (Xanthorrhoeaceae-Asphodeloideae) inferred from plastid trnL-F and nrDNA ITS sequences

The current study represents phylogenetic analyses of Eremurus, Asphodelus and Asphodeline (Xanthorrhoeaceae-Asphodeloideae) using both plastids genome (trnL-F) and the nuclear ribosomal internal transcribed spacer (nrDNA ITS) sequence data. The analyses revealed that each of the investigated genera is monophyletic. Eremurus subgenus Eremurus is monophyletic, whereas the E. subgenus Henningia is paraphyletic. Trachyandra is the closest relative of Eremurus. Bulbinella and Kniphofia are subsequent sisters of Eremurus and Trachyandra. Aloe, Haworthia and Bulbine were nested in a single clade, sister to the last four genera. Asphodeline section Asphodeline appeared to be non-monophyletic, because of the inclusion of A. damascena. All species of Asphodelus analyzed herein, formed a well-supported clade that it is sister to the clade of Asphodeline species.     

Phylogeny and classification of Oleaceae based on rps16 and trnL-F sequence data

Phylogenetic relationships among 76 species of Oleaceae, representing all 25 recognized genera of the family, were assessed by a cladistic analysis of DNA sequences from two noncoding chloroplast loci, the rps16 intron and the trnL-F region. Consensus trees from separate and combined analyses are congruent and agree well with nonmolecular data (chromosome numbers, fruit and wood anatomy, leaf glycosides, and iridoids). The two debated genera Dimetra and Nyctanthes, previously suggested to belong to Verbenaceae (sensu lato) or Nyctanthaceae, are shown to belong to Oleaceae, sister to the hitherto genus incertae sedis Myxopyrum. This clade is also supported by anatomical and chemical data. The subfamily Jasminoideae is paraphyletic, and a new classification is presented. The subfamily level is abandoned, and the former Jasminoideae is split into four tribes: Myxopyreae (Myxopyrum, Nyctanthes, and Dimetra), Fontanesieae (Fontanesia), Forsythieae (Abeliophyllum and Forsythia), and Jasmineae (Jasminum and Menodora). The tribe Oleeae (previous subfamily Oleoideae) is clearly monophyletic, comprising the subtribes Ligustrinae (Syringa and Ligustrum), Schreberinae status novus (Schrebera and Comoranthus), Fraxininae status novus (Fraxinus), and Oleinae (12 drupaceous genera). An rps16 sequence obtained from Hesperelaea, known only from the type specimen collected in 1875, confirmed the placement of this extinct taxon in the subtribe Oleinae.