Differentiating aquatic plant communities in a eutrophic river using hyperspectral and multispectral remote sensing

1. This study evaluates the efficacy of remote sensing technology to monitor species composition, areal extent and density of aquatic plants (macrophytes and filamentous algae) in impoundments where their presence may violate water‐quality standards. 2. Multispectral satellite (IKONOS) images and more than 500 in situ hyperspectral samples were acquired to map aquatic plant distributions. By analyzing field measurements, we created a library of hyperspectral signatures for a variety of aquatic plant species, associations and densities. We also used three vegetation indices. Normalized Difference Vegetation Index (NDVI), near‐infrared (NIR)‐Green Angle Index (NGAI) and normalized water absorption depth (D_H)_, at wavelengths 554, 680, 820 and 977 nm to differentiate among aquatic plant species composition, areal density and thickness in cases where hyperspectral analysis yielded potentially ambiguous interpretations. 3. We compared the NDVI derived from IKONOS imagery with the in situ, hyperspectral‐derived NDVI. The IKONOS‐based images were also compared to data obtained through routine visual observations. Our results confirmed that aquatic species composition alters spectral signatures and affects the accuracy of remote sensing of aquatic plant density. The results also demonstrated that the NGAI has apparent advantages in estimating density over the NDVI and the D_H. 4. In the feature space of the three indices, 3D scatter plot analysis revealed that hyperspectral data can differentiate several aquatic plant associations. High‐resolution multispectral imagery provided useful information to distinguish among biophysical aquatic plant characteristics. Classification analysis indicated that using satellite imagery to assess Lemna coverage yielded an overall agreement of 79% with visual observations and >90% agreement for the densest aquatic plant coverages. 5. Interpretation of biophysical parameters derived from high‐resolution satellite or airborne imagery should prove to be a valuable approach for assessing the effectiveness of management practices for controlling aquatic plant growth in inland waters, as well as for routine monitoring of aquatic plants in lakes and suitable lentic environments.     

Pseudomoraria triglavensis gen. n., sp. n. (Copepoda,Harpacticoida) from a high-alpine reservoir in Slovenia

Numerous specimens of Pseudomoraria triglavensis gen.n., sp.n. were collected from small, high-alpine, reservoir Moilec. The reservoir is situated in the centre of Triglav national park (NW Slovenia) at an altitude of 1690 m. The new genus differs from related genera Moraria, Morariopsis and Paramorariopsis by the reduced articulation of exopodites and endopodites in both sexes. It also differs from Moraria by possessing sexually dimorphic furcal rami. Detail taxonomic differences between these related genera and their ecology are discussed.     

Effects of partitioning allochthonous and autochthonous resources on food web stability

The flux of energetic and nutrient resources across habitat boundaries can exert major impacts on the dynamics of the recipient food web. Competition for these resources can be a key factor structuring many ecological communities. Competition theory suggests that competing species should exhibit some partitioning to minimize competitive interactions. Species should partition both in situ (autochthonous) resources and (allochthonous) resources that enter the food web from outside sources. Allochthonous resources are important sources of energy and nutrients in many low productivity systems and can significantly influence community structure. The focus of this paper is on: (i) the influence of resource partitioning on food web stability, but concurrently we examine the compound effects of; (ii) the trophic level(s) that has access to allochthonous resources; (iii) the amount of allochthonous resource input; and (iv) the strength of the consumer–resource interactions. We start with a three trophic level food chain model (resource–consumer–predator) and separate the higher two trophic levels into two trophospecies. In the model, allochthonous resources are either one type available to both consumers and predators or two distinct types, one for consumers and one for predators. The feeding preferences of the consumer and predator trophospecies were varied so that they could either be generalists or specialists on allochthonous and/or autochthonous resources. The degree of specialization influenced system persistence by altering the structure and, therefore, the indirect effects of the food web. With regard to the trophic level(s) that has access to allochthonous resources, we found that a single allochthonous resource available to both consumers and predators is more unstable than two allochthonous resources. The results demonstrate that species populating food webs that experience low to moderate allochthonous resources are more persistent. The results also support the notion that strong links destabilize food web dynamics, but that weak to moderate strength links stabilize food web dynamics. These results are consistent with the idea that the particular structure, resource availability, and relative strength of links of food webs (such as degree of specialization) can influence the stability of communities. Given that allochthonous resources are important resources in many ecosystems, we argue that the influence of such resources on species and community persistence needs to be examined more thoroughly to provide a clearer understanding of food web dynamics.     

A new species of Neocervinia (Copepoda: Harpacticoida: Cerviniidae) from the hyperbenthos of the Hatsushima cold-seep site in Sagami Bay, Japan

A new species of harpacticoid copepod, Neocervinia itoi (Cerviniidae), is described on the basis of females and copepodids collected from the Hatsushima cold-seep site in Sagami Bay, Japan. It is morphologically very close to its deep-sea congeners N. tenuicauda (Brotskaya, 1963) and N. unisetosa (Montagna, 1981). The new species differs primarily in the segmentation of the antennule and the endopod of both mandible and maxilliped, and in form and shape of the setae on leg 5. The presence of sensillar structures on the proximal part of the antennule is discussed. A key to the species of Neocervinia is presented. This revised version was published online in July 2006 with corrections to the Cover Date.     

Activity profiles of bacterioplankton in a eutrophic river

1. The significance of microbial diversity in processing dissolved organic matter (DOM) is largely unknown. We investigated the range of functional diversity in the bacterioplankton from a eutrophic river by profiling extracellular enzyme activities (EEA) and substrate-induced respiration (SIR) patterns.
2. The EEA profiles consisted of assays for 21 hydrolases, measured using fluorogenic substrates arrayed on 96-well microplates. Commercially available BiOLOG^® GN and ECO plates, which contained 120 different substrates, were used for the SIR profiles.
3. The EEA data were more dynamic than the SIR. Five enzymes, leucine aminopeptidase, alkaline phosphatase, alanine aminopeptidase, arginine aminopeptidase and β-glucosidase, showed consistently high activity; ten others were ubiquitous at lower activity levels; the remainder were detected intermittently. The SIR data showed less temporal variability. With one exception (citrate), the 20 substrates that generated the largest responses were all saccharides or their derivatives.
4. The EEA and SIR data did not generally correlate. Both methods were effective for ordinating bacterioplankton although, unlike the SIR, the EEA ordination followed a clear temporal trajectory.
5. Because the SIR profiles are based on a culture response, whilst the EEA profiles measure activity of the extant community, the latter appear to be more directly linked to the mechanics of DOM processing.     

Nitrogen sedimentation in a lake affected by massive nitrogen inputs: autochthonous versus allochthonous effects

1. Monthly changes to N loadings, in‐lake particulate organic nitrogen (PON), planktonic PON, and PON sedimentary flux were studied in a Spanish flowthrough, seepage lake subject to massive nitrogen inputs from June 2003 to December 2004 when water renewal was very rapid (0.09–0.17 year). 2. The distribution of in‐lake PON did not show a seasonal trend. Total nitrogen input flux ranged from 1.23 to 4.83 g N m^?2 day^?1, 71–76% of which is nitrate while PON represents 6–10%. PON sedimentation rates ranged from 9 to 90 mg N m^?2 day^?1 and fluctuated on a seasonal basis, reaching a minimum in winter and early spring and a maximum after thermal turnover had occurred. 3. This fluctuation was not related to either autochthonous planktonic production or allochthonous inputs. Since charophyte populations in Colgada Lake underwent a seasonal pattern of growth and decomposition, and ¹⁵δN values of settling material peaked at the end of that decomposition process, we suggest that PON sedimentary flux could be partly driven by decomposed charophyte particles. 4. However, the picture of PON sedimentation in this lake was more complex than anticipated because water residence time partly explained PON variability, albeit with a 1 month lag. Water residence time explained 40% of the overall variance of yearly averaged PON sedimentary flux in a meta‐analysis of 13 lakes worldwide. However, the factors such as phytoplankton composition, trophic structure, bottom communities, nutrient loading or productivity levels may also be influential on PON settling dynamics.     

A new species of Copepoda Harpacticoida, Xylora calyptogenae spec. n., with a carnivorous life-style from a hydrothermally active submarine volcano in the New Ireland Fore-Arc system (Papua New Guinea) with notes on the systematics of the Donsiellinae Lang, 1948

A new species of harpacticoid copepods, Xylora calyptogenae spec. n., from Edison Seamount, a hydrothermally active submarine volcano in the New Ireland Fore-Arc system (Papua New Guinea) is described. The new species belongs to the Donsiellinae Lang, 1944, a highly specialised taxon, the members of which have previously been encountered only in association with decaying wood and/or wood-boring isopods. A closer relationship of the Donsiellinae with the Pseudotachidiidae Lang, 1936, can be stated on the basis of characteristics concerning the setation and/or segmentation of A1, A2, Mxl, Mxp, the shape of the female P5, anal somite, sexual dimorphisms on P2 and P3 and missing caudal seta I. Within the Pseudotachidiidae, the Donsiellinae again can be well characterized, e.g. by the setation and segmentation of A2, Mxl, swimming-legs, the shape of P1, female P5, male P2, sexual dimorphism and male P5. The Donsiellinae share some apomorphies with the pseudotachidiid subtaxon Paranannopinae Por, 1986: setation/segmentation of Mx, P1, A1. X. calyptogenae spec. n. is more closely related to Xylora bathyalis Hicks 1988 living in the deep sea wood substrata in New Zealand waters. Some traits of the evolutionary history of the Donsiellinae become evident, probably starting from the more primitive deep sea taxa X .calyptogenae spec. n., which lives in the hydrothermal seafloor in the absence of decaying wood, and X. bathyalis, which is found in decaying wood but not necessarily associated with the wood-boring isopod Limnoria Leach, 1814, towards the more advanced genera such as Donsiella Stephensen, 1936, which invades shallow waters and, further, clings to Limnoria, forming a close and, for the copepod, probably obligatory association. The specialised mouthparts of X. calyptogenae spec. n. seem to facilitate the grabbing and fixing of larger and/or active food items. This is confirmed by the presence of a large prey organism, presumably a copepod, consumed either alive or dead, in the gut of one of the available specimens. This morphology of the mouthparts is also shared by the closely related X. bathyalis.     

Latitudinal diversity patterns of continental benthic copepod species assemblages in the Americas

The diversity, considered as richness (numbers) of genera and species, of continental benthic Copepoda of the Americas was examined. Thirty-three local lists of planktonic and benthic Cyclopidae (Eucyclopinae and Cyclopinae), 21 local lists of epibenthic Harpacticoida (Canthocamptidae), and 8 local lists of interstitial Harpacticoida (Parastenocarididae) were compared. Available data do not allow the rejection of the null hypothesis of no significant difference in diversity of tropical and temperate copepod faunas. For Cyclopidae, 6–15 genera and 6–44 species were recorded from local areas; linear regression analysis showed no significant correlation between latitude and number of genera and species. For Canthocamptidae, 1–13 genera and 3–43 species were recorded locally, with no significant correlation between latitude and number of species; for genera the correlation between latitude and number of genera was strongly positive, but the effect of latitude is small. No relationship between latitude and diversity of the Parastenocarididae was evident from inspection. Endemism of Cyclopidae and Canthocamptidae is significantly greater in South America, as shown by comparisons of Sørensen's similarity coefficient between paired areas. Because of this high degree of endemism, conservation strategies for South American wetland invertebrates should emphasize preservation of many small sites.     

Interactions between fauna and sediment control the breakdown of plant matter in river sediments

1. A substantial portion of particulate organic matter (POM) is stored in the sediment of rivers and streams. Leaf litter breakdown as an ecosystem process mediated by microorganisms and invertebrates is well documented in surface waters. In contrast, this process and especially the implication for invertebrates in subsurface environments remain poorly studied. 2. In the hyporheic zone, sediment grain size distribution exerts a strong influence on hydrodynamics and habitability for invertebrates. We expected that the influence of shredders on organic matter breakdown in river sediments would be influenced strongly by the physical structure of the interstitial habitat. 3. To test this hypothesis, the influence of gammarids (shredders commonly encountered in the hyporheos) on degradation of buried leaf litter was measured in experimental systems (slow filtration columns). We manipulated the structure of the sedimentary habitat by addition of sand to a gravel‐based sediment column to reproduce three conditions of accessible pore volume. Ten gammarids were introduced in columns together with litter bags containing alder leaves at a depth of 8 cm in sediment. Leaves were collected after 28 days to determine leaf mass loss and associated microbial activity (fungal biomass, bacterial abundance and glucosidase, xylosidase and aminopeptidase activities). 4. As predicted, the consumption of buried leaf litter by shredders was strongly influenced by the sediment structure. Effective porosity of 35% and 25% allowed the access to buried leaf litter for gammarids, whereas a lower porosity (12%) did not. As a consequence, leaf litter breakdown rates in columns with 35% and 25% effective porosity were twice as high as in the 12% condition. Microbial activity was poorly stimulated by gammarids, suggesting a low microbial contribution to leaf mass loss and a direct effect of gammarids through feeding activity. 5. Our results show that breakdown of POM in subsurface waters depends on the accessibility of food patches to shredders.     

Cladistics of Sunaristes,a genus of harpacticoid copepods associated with hermit crabs

Four species of Sunaristes (Canuellidae) are known to live in association with hermit crabs and exhibit a degree of host specificity. Although hermit crabs are common in many parts of the world, Sunaristes is notably absent from waters of the New World. The phylogeny of Sunaristes is here examined through a cladistic analysis. The reconstructed phologeny indicates that S. inaequalis and S. japonicus form a sister group, and its closest relative is S. tranteri. The sister taxon of this 3-species clade is S. paquri. It is assumed that Sunaristes evolved in the Paleocene on the north shore of the Tethys seaway. The constructed cladogram forms the basis for the analysis of vicariant events that led to the speciation and development of the present pattern of distribution of Sunaristes.     

Rapid analysis of total sulphur in soils and plant material

Summary The Leco high-frequency induction furnace technique was adapted for rapid titrimetric analysis of total S in soils and plant material. Accuracy and precision were tested by standardizing soils and plant material and by measuring recovery of known amounts of inorganic and organic sulphur standards from these. Recovery ranged from 86 to 90 per cent and differed between soils, depending on organic matter and N content.     

Discharge of disinfected wastewater in recipient aquatic systems: fate of allochthonous bacterial and autochthonous protozoa populations

The discharge of disinfected effluents affects the bacterivorous ability of protozoa and the effect depends on the disinfectant applied. Chlorine provokes a decrease in the number of protozoa and a delay in the bacterivorous ability. The discharge of ozonated and peracetic acid-treated wastewater provokes only an initial slight decrease in bacterivorous ability. No correlation was found between toxicity values detected using the Microtox^™ assay and the effect of disinfected effluents on freshwater protozoa populations. After the disinfection processes, recipient systems (fresh and marine water) have different effects on the survival of Escherichia coli populations discharged to them. The effect of the freshwater recipient system is less negative than the effect provoked by sea-water, and the differences detected depend on the disinfection treatment applied. The wastewater bacterial population as a whole is able to grow after discharge of disinfected wastewater to receiving waters. However, in the absence of predation or competition, the recipient systems exert selection, with rod-shaped bacteria predominating.     

Distribution and ecology of copepods in mountainous regions of the Eastern Alps

Copepod species richness, patterns of distribution and composition of assemblages were evaluated in high-altitude sites in the Eastern Alps. Diverse habitats were sampled in 160 lentic water bodies from different geologic areas, ranging from acid bog ponds to alkaline karst waters and from small temporary puddles to deep lakes. The altitudinal range comprised all mountainous regions from the montane (1290 m a.s.l.) to the alpine (2886 m a.s.l.) zone. Forty-four species were recorded, with the harpacticoids being the richest group. Although most species occupied a wide altitudinal range, some stenotopic mountain forms were restricted to alpine habitats. The most widespread taxa were Acanthocyclops vernalis, Eucyclops serrulatus, Bryocamptus rhaeticus, Arctodiaptomus alpinus and Cyclops abyssorum tatricus. All species found were listed along with notes on their distribution, ecology and patterns of coexistence. There was both a marked change in species composition and a decline in species richness from hardwater habitats in the Limestone Alps to softwater sites in the Central Alps. Copepod taxocoenoses were most diverse in montane limestone lakes and impoverished with increasing altitude. Copepods and sampling sites were ordinated using canonical correspondence analysis (CCA), and copepod assemblages were defined in relation to physical and chemical parameters, habitat type and presence/absence of planktivorous fish. Planktonic species were largely absent from lakes with introduced fish. Although calanoid associations were common, coexisting diaptomids were rare, suggesting a strong interspecific competition between these predominantly filter feeders. Most copepods found are common eurytopic or cold stenothermal, but some exhibit peculiar disjunct patterns of geographical distribution, and others are apparently restricted to the Alps. Some species are discussed in more detail from a zoogeographical point of view. A complete checklist of copepods recorded to date from high-altitude sites in the Eastern Alps is provided.     

Phylogenetic relationships within the harpacticoid copepod family Peltidiidae Sars, including the description of a new genus

With the discovery of Alteuthoides kootare gen. et sp. no v. , found living inside an hexactinellid sponge from offshore waters of New Zealand, and the synonymization herein of Paralteutha T. Scott with Eupelte Claus, the number of genera in the harpacticoid copepod family Peltidiidae Sars now stands at eight. In the morphology of the maxillipeds and the armature of the first leg exopods, Alteuthoides is most similar to Alteuthella (A. Scott) and Alteuthellopsis Lang. These shared apomorphies are regarded as convergent ecological specializations to a lifestyle as close associates of other marine invertebrates. Results of a cladistic analysis further assist in the interpretation of relationships within the family. Lang's speculation that Peltidium and Parapeltidium form an independent lineage from the ancestral peltidiid gains further support. Alteutha remains as the basal group to the second lineage in comparison with which all remaining genera are derived in some respect. Alteuthellopsis would appear to be the most advanced genus in the family. Because of recent additions to Neopeltopsis Hicks and Alteuthellopsis , revised diagnoses, together with a revised key to genera, are also presented.     

Experimental dietary manipulations for determining the relative importance of allochthonous and autochthonous food resources in tropical streams

1. Autochthonous sources of organic matter appear to make a minor contribution to food webs in temperate forest streams, but their roles in supporting consumer biomass in tropical lotic environments have received little attention. We investigated the importance of autochthonous and allochthonous food sources to Brotia hainanensis (Pachychilidae), a detritivorous and algivorous snail common in Hong Kong hillstreams, using experimental dietary manipulations and assimilation-based analyses, including stoichiometry, carbon (C) and nitrogen (N) stable isotopes and fatty acid (FA) profiles.
2. Juvenile B. hainanensis collected in Pak Ngau Shek Stream were cultured under controlled laboratory conditions and fed for 2 months with either conditioned Liquidambar formosana (Hamamelidaceae) leaf litter or periphyton. Samples of B. hainanensis were also collected from the stream at the end of the experiment for comparison with snails reared in the laboratory.
3. Periphyton and leaf litter exhibited marked differences in C/N ratios, δ ¹³C and δ ¹⁵N values and FA profiles. Stable isotope analysis and FA profiling of laboratory-reared and field-collected B. hainanensis both confirmed that snails relied primarily on autochthonous foods, especially periphytic diatoms and cyanobacteria. Stoichiometry results indicated that periphyton was a more nutritious food (with lower C/N ratio) than leaf litter.
4. This is the first study demonstrating that the combined use of stable isotopes and FA profiles is an effective diagnostic tool to trace the basal food sources of consumers in natural stream habitats. Our findings further support the hypothesis that primary production in tropical streams is generally more important to aquatic consumers than inputs of terrestrial detritus.     

The Occurrence of Bulbella abscondita (Bryozoa,Ctenostomata) in Brackish Waters of Northern Italy

The victorellid bryozoans, Tanganella muelleri and Bulbella abscondita, have been found in the delta of the River Po, Northern Italy. Our finds seem to be the first recorded of B. abscondita in waters in Italy.     

Invertebrate grazing and riparian shade as controllers of nuisance algae in a eutrophic river

1. Algal growth in lotic systems is controlled either from the bottom‐up (e.g. nutrients and light, which determine growth rates) or from the top‐down (e.g. grazing pressure, which reduces accumulated biomass). Nutrient‐enriched streams that support large and diverse grazing macroinvertebrate populations and those with shaded riparian corridors rarely suffer from excessive algal growth. 2. In this study, the density of benthic algivorous macroinvertebrates was experimentally manipulated in shaded and open nutrient‐enriched stream habitats of the Owennagearagh River, south‐west Ireland. The ability of macroinvertebrate grazers and riparian shade to control benthic algal growth [particularly the nuisance alga, Cladophora glomerata (L. Kütz)] was investigated. Three sites with markedly different concentrations of plant nutrients (one site upstream and two sites downstream of the sewage outfall) were selected. The density of grazing invertebrates colonising ceramic tiles was reduced using high‐voltage localised electric pulses. Replicates of treatment (grazer‐excluded) and control (grazed) tiles were deployed in open and shaded (<25 and >80% canopy cover, respectively) patches of stream bed, in each site. 3. After 2‐week Cladophora cover, periphytic chlorophyll a and biofilm ash‐free dry mass (AFDM) were quantified for all experimental tiles. Values for all three parameters were highest on grazer‐excluded tiles from open patches. Grazed tiles from open patches accrued little Cladophora and had significantly lower levels of chlorophyll a and AFDM. Nutrient inputs were found to have an impact on the density of grazing invertebrates, with higher densities of Baetis nymphs at the most nutrient‐enriched site. 4. Our results demonstrate that in eutrophic, high‐light streams, filamentous algae can quickly accumulate to nuisance levels in the absence of invertebrate grazers. In future, greater attention should be paid to the role of grazing invertebrates in controlling nuisance algae in streams, in addition to algal–nutrient relationships.     

Cypriniform fish in running waters reduce hyporheic oxygen depletion in a eutrophic river

1. The hyporheic zone is an important habitat for benthic invertebrates and early-developmental stages of gravel spawning fish. However, the eutrophication of running waters and, in turn, the excessive periphyton biomass leads to its biological clogging. The result of these processes is oxygen depletion and a reduction in the habitat quality of the hyporheic zone.
2. This study assessed whether top-down effects of two important European river fish species, the large herbivorous cypriniform common nase (Chondrostoma nasus, L.) and the large omnivorous cypriniform European chub (Squalius cephalus, L.), can reduce eutrophication effects in the hyporheic zone. A 4-week mesocosm-based field experiment in a eutrophic river was conducted using cage enclosures stocked or not with either nase or chub.
3. The top-down control of periphyton was expected to reduce biological clogging and thereby increase oxygen availability in the hyporheic zone. Accordingly, we hypothesised that in enclosures stocked with either fish the concentrations of dissolved oxygen in the hyporheic zone would be higher and the periphyton biomass would be lower than in enclosures without fish stocking.
4. Hyporheic oxygen concentrations were significantly higher in enclosures stocked with either nase or chub than in enclosures without fish stocking. However, periphyton ash-free dry mass was significantly reduced only in enclosures stocked with nase, not in those stocked with chub. Thus, the positive effects of nase and chub on hyporheic oxygen availability were caused by different mechanisms.
5. Our results demonstrate that nase and chub can reduce eutrophication effects in the hyporheic zone of running waters. Hence, protecting and enhancing stocks of herbivorous and omnivorous fish will contribute to restoring the hyporheic zone in efforts to preserve biodiversity in eutrophic rivers.