The cross sensitivity to radiations, chemical mutagens and heat treatment of X-ray sensitive mutants of yeast

Summary A number of radiation sensitive mutants of yeast were examined for their sensitivity to the inactivating agents, ultraviolet light (UV), gamma irradiation, ethyl methane sulphonate (EMS) and heat treatment (52° and 37°).A mutant of the gene rad-3, isolated on the basis of its primary sensitivity to UV showed sensitivity only to UV. In contrast the five X-ray sensitive mutants were sensitive to all four inactivating treatments. Considerable variation was observed in the response of the mutants to liquid holding treatment in non-nutrient solution.The data concerning the heat sensitivity of the X-ray sensitive mutants confirms the correlation between heat and X-ray sensitivity observed in bacteria by Bridges (1969).The results indicate that at least two separable pathways of cellular repair exist in yeast, one effective in the repair of UV damage and the other effective in the repair of ionising radiation, alkylating agents, heat and a fraction of UV damage.     

The properties of UV sensitive mutants of Escherichia coli K12 which are also refractory to colicin E2

Summary Among mutants refractory to colicin E2 at low temperatures but sensitive at high temperatures (designated Ref-II), three strains are described which are also UV sensitive. Although colicin refractivity is temperature dependent UV sensitivity is expressed at all temperatures. Although the UV sensitive lesion appears to be similar in its effects to that in Rec (recombinationless) strains, mutants specifically isolated as Rec strains are in fact more sensitive to E2 than are wild type strains. It is suggested that E2 refractivity and UV sensitivity in the mutants probably reflects the phenotypic expression of distinct although linked genes. It is also suggested that the degradation of DNA stimulated by adsorption of E2 to wild type bacteria may be caused by the same enzyme(s) which causes enhanced breakdown of DNA in some rec ^– mutants after UV irradiation.     

A UV-supersensitive mutant in the yeast Schizosaccharomyces pombe

Summary A high UV-sensitive mutant was obtained from a UV-sensitive strain of the yeast Schizosaccharomyces pombe after a mutagenic treatment. By genetic analysis, it was possible to distinguish two independent loci. The double mutant is supersensitive, that is more UV-sensitive than either of the two single mutants. This suggests that the mutations involved interfere with two repair pathways that are, at least partially, independent of each other.Some properties of the two single mutants were studied. These mutants differ notably in their response to caffeine, to liquid-holding, to exposure to visible light after UV irradiation, and in their UV-sensitive during the logarithmic growth phase.Comparison of the properties of the wild-type strain and of the different UV sensitive mutants leads to the conclusion that one repair pathway is used preferentially in the wild-type strain.Abbreviations DRF dose reduction factor - LH liquid holding     

In vivo nicking and rejoining of nuclear DNA in ultraviolet-irradiated radiation-resistant and sensitive strains of Dictyostelium discoideum

Summary Some aspects of DNA repair in several radiation-resistant and radiation-sensitive strains of Dictyostelium discoideum were investigated by using alkaline sucrose gradients to analyze for the production and resealing of single-strand breaks following irradiation with 254 nm UV. All radiation-resistant strains and all mutants assayed that are sensitive to both UV and ⁶⁰Co gamma rays produced singlestrand breaks in their nuclear DNA after a UV fluence of 15 J/m². Mutants at the radC locus which are sensitive to UV but as resistant as their parental strains to ⁶⁰Co gamma rays produced many fewer single-strand breaks in their DNA after irradiation with UV. Thus, the radC mutations alter a repair pathway specific for UV-induced DNA damage and presumably affect the activity of a UV-damage-specific endonuclease involved in excision repair. All radiation-resistant strains and all of our mutants sensitive to gamma rays rejoined much of their DNA during a three-hour post-UV-irradiation incubation, suggesting that these strains have at least a partially intact excision repair system.Abbreviations used UV ultraviolet light - PBS phosphate buffered saline - cpm counts per minute     

Repair of damage caused by UV- and X-irradiation in the amoeboflagellateNaegleria gruberi

Summary Cysts ofNaegleria gruberi have a normal UV- and an extremely high X-ray resistance compared to other protozoans. Caffeine and 3-aminobenzamide applied to excysting amoeba after irradiation in the encysted state (UV and X-rays) by feeding with drug-containing bacteria increased lethality, while fractionated irradiation (UV) and liquid-holding (UV and X-rays) increased survival. Illumination with visible light after UV-irradiation restored almost 100% viability. The results are discussed in regard to the activity of repair mechanisms.     

Comparative mutagenic effects of ethyl methane-sulfonate, n-methyl-n'-nitro-n-nitrosoguanidine, ultraviolet radiation and caffeine on Dictyostelium discoideum.

A high frequency of morphogenetic mutants of Dictyostelium discoideum can be induced by treatment with MNNG under conditions which result in relatively low cell killing. Six temperature-sensitive growth mutants induced by this treatment were isolated by replica plating. Among these, five showed spontaneous reversion rates of 10(-4) to 10(-5). The mutagenic activity of ems, measured for the induction of both morphogenetic and temperature-sensitive mutants, was weaker than that of MNNG and UV radiation. High frequencies of morphogenetic mutants were obtained only with doses of UV irradiation that resulted in high killing of cells or spores. Caffeine, at concentrations that slightly decreased the growth rate of amoebae in axenic medium, induced morphogenetic defects and also enhanced the mutagenic effect of UV irradiation. However, all the aggregateless clones derived from caffeine treatment that were studied reverted to the wild-type phenotype after a variable number of clonal re-isolations.     

Mutagenic DNA repair in Escherichia coli. VI. Gamma radiation mutagenesis in a tif-1 strain.

Summary In the non-filamenting tif-1 strain WP44_s NF trp a dramatic enhancement of both UV and gamma ray mutability to Trp⁺ was observed when irradiated bacteria were incubated on plates at 43°. This enhanced mutability was progressively suppressed when the initial plating density exceeded 10⁸ bacteria per plate and was not demonstrable in liquid media. Under optimal conditions more mutants were induced by gamma radiation than could reasonably be accounted for by the initial number of radiation-induced lesions in the DNA, implying the existence of some mechanism for amplifying the radiation effect. Moreover, the tif-enhanced mutation frequency could be obtained if incubation at restrictive temperature was delayed for up to 60 min in nutrient broth after irradiation, at a time when all known reparable DNA damage had been repaired and the number of viable bacteria had more than doubled. On plates the effect of high temperature was still fully demonstrable 120 min after irradiation. The results are hard to reconcile with the hypothesis that incubation of tif-1 bacteria at restrictive temperature causes the induction of a repair system acting on DNA damaged by gamma radiation. A more compatible interpretation would be that radiation causes a persisting physiological disturbance in the cell and that this enhances the spontaneous mutator effect occurring in tif-1 bacteria subjected to subsequent thermal shock.     

Induced variations in microorganisms

The mutagenic effect of ultraviolet light on a strain ofRhizobium trifolii T5 was studied. A gradual build-up of radioresistance in the population of the wild cells was observed as a result of cyclic UV irradiation, although there, was no definite indication for a plateau of maximal resistance of the population even after 20 cycles of irradiation. The radio-resistance was built up sooner in a population cycled at a low dose of irradiation (3 sec) than at a high dose (10 sec). The fluctuation test indicated that UV acted as an inducing agent. The frequency of radioresistant cells in a radiation cycled population was about 6.8×10^?6 as against c.4×10^?6 in the nonirradiated population. Five, mutants were examined in detail, in which radioresistance in two was accompanied by resistance to streptomycin also. The mutants did not differ drastically from the wild, strain in their biochemical properties, salt tolerance and clover infectivity. No UV induced auxotrophic mutants were detected.     

Blue Light Reception in Phycomyces: Red Light Sensitization in madC Mutants

Sporangiophores of the zygomycete fungus Phycomyces blakesleeanus are sensitive to near UV and blue light. The quantum effectiveness of yellow and red light is more than 6 orders of magnitude below that of near UV or blue light. Phototropism mutants with a defect in the gene madC are about 10⁶ times less sensitive to blue light than the wild type. These mutants respond, however, to yellow and red light when the long wavelength light is given simultaneously with actinic blue light. In the presence of yellow or red light the photogravitropic threshold of madC mutants is lowered about 100-fold though the yellow and the red light alone are phototropically ineffective. A step-up of the fluence rate of broad-band red light (> 600 nm) from 6 × 10^?3 to 6W m^?2 elicits, in mutant C 148 madC, a transient deceleration of the growth rate. The growth rate of the wild type is not affected by the same treatment. The results are interpreted in terms of a red light absorbing intermediate of the blue light photoreceptor of Phycomyces. The intermediate should be short-lived in the wild type and should accumulate in madC mutants.     

Conditions for mutagenesis in the cynanobacterium Aphanocapsa 6714

Conditions for induction of mutants have been studied in the unicellular, blue-green alga, Aphanosapsa 6714. Ethylmethanesulfonate, nitrosomethylurea, an acridine (euflavine) and -rays from ⁶⁰Co induced no significant increase in mutant frequency although they produced classical killing effects. Methyl-nitro-nitrosoguanidine (NTG), at similar lethal doses, led to only a small increase in mutant yields. A useful mutagenic action was obtained only with ultraviolet light. This effect proved to be sensitive to photodependent repair processes, but not to dark excision repair systems. Attempts to adapt enrichment procedures by penicillin selective killing were unsuccessful.Abbreviations UV Ultraviolet light - NTG Methyl nitro nitroso guanidine - NMU Nitro methyl urea - EMS Ethyl methane sulfonate     

Studies on radiation-sensitive mutants of E. coli. II. Breakage and repair of ultraviolet irradiated intracellular DNA of phage lambda

Summary It has been shown that linear DNA molecules of phage are converted to the twisted circular structure (species I) by covalent closure of the both strands at the cohesive ends after infection to the immune bacteria and that the twisted circular molecules are transformed to the circular form (species II) by a single-strand break in one of the strands of their DNA. This system offers a very sensitive method to study on the strand breaks or their repair. For characterization of the defects of ultraviolet sensitive strains, the structural changes of ultraviolet irradiated DNA in these strains were studied.Ultraviolet irradiation to phage greatly reduced the extent of conversion of the molecules to the species I in the uvrD mutant while the irradiation showed little effect on the conversion in the uvrA, B and C mutants. When infected bacteria carrying species I molecules were irradiated, the species I molecules in the uvrD mutant were disrupted while most of the molecules in the uvrA, B and C mutants kept the structure. These results indicate that in the irradiated DNA strand breaks are rarely introduced or, if introduced, repaired rapidly in the uvrA, B and C mutants and they are introduced in the uvrD mutant leading to the degradation of the DNA. These results provide a firm evidence that the defect of the uvrD mutant is different from other Her^- mutants and in the process of repair synthesis.Ultraviolet irradiation to the uvrD mutants promote the formation of the species I molecules from the infected irradiated -DNA.Such effect was not observed with the uvrA mutant. Since the uvrD mutant has UV reactivation capacity and the uvrA mutant has not, the above phenomenon is probably caused by UV reactivation and may provide a more direct method to study the mechanisms of UV reactivation than the plaque assay.Abbreviations used UV Ultraviolet light - UVr Ultraviolet light reactivation This work was aided in part by a research grant GM 08384 from the United States Public Health Service.     

Genetic analysis of lon mutants of strain K-12 of Escherichia coli

Summary Following UV irradiation of AB1157 31 mucoid ultraviolet light UV sensitive mutants were isolated. These were all induced to form filaments by UV irradiation, i.e. they had all the phenotypic properties of Lon mutants. These lon mutants fell into two phenotypic classes based on their sensitivity to UV. The gene determining UV sensitivity and mucoidy in all mutants of both Class A and Class B was cotransducible with proC. Intra-class crosses by Pl transduction yielded no UV resistant recombinants. Inter-class crosses yielded UV resistant nonmucoid recombinants, the frequency depending on the direction of the cross. The data imply two adjacent blocks in the lon region of E. coli and the order of markers in this region is probably proC tsx lon Class A lon purE Class B.This work was carried out under Public Health Service Grant CA 05687-08 from the National Cancer Institute.Recipient of a Public Health Service Career Development Award.     

Mutants of the phototrophic bacteria Rhodobacter sphaeroides sensitive to the mutagenic action of long-wave ultraviolet light

The mutagenic action of near ultraviolet (NUV, greater than or equal to 280) nm) on purple phototrophic soil bacteria Rhodobacter sphaeroides: wild strain 2R and 12 mutants obtained earlier sensitive to UV derivates (UVS) was investigated. The mutagenic action of NUV was measured by induction of resistance to tetracycline (Tet) and nalidixic acid (Nal) and reversion of pigment mutants to wild-type phenotype. The NUV light induces the mutations of resistance to Nal and Tet in wild-type strain 2R; the UVS mutants differed greatly in their NUV-induced mutability. Three UVS mutants were characterized by greatly increased mutability in all analysed loci; slight mutability was found in seven mutants. On the basis of the data obtained it has been concluded that the UVS mutants R. sphaeroides can be used as test organisms in estimation of mutagenic activity of NUV. The molecular mechanisms and genetic control of NUV-induced mutagenesis are discussed.     

Interactions among genes controlling sensitivity to radiation and alkylation in yeast

Summary In the simple eucaryote Saccharomyces cerevisiae there are at least three phenotypically distinct classes of mutants sensitive to inactivation by radiations and alkylating agents: class I mutants are sensitive to ultraviolet light and nitrogen mustard (HN2); class II mutants are sensitive to X-rays and methylmethane sulphonate (MMS); and class III mutants are sensitive to all four of these agents. We have constructed doubly mutant strains of types (I, I), (I, II), (I, III), and (II, III) and have measured their sensitivity to UV, X-rays, HN2 and MMS in order to characterize the interactions of the various mutant gene pairs. Class (I, III) double mutants proved to be supersensitive to UV and HN2 and class (II, III) double mutants proved to be supersensitive to X-rays and MMS. All other double mutants showed little or no enhancement of sensitivity over their most sensitive single mutant parents. Mutants of class I are known to be defective in excision repair and our results are consistent with the idea that there exist at least two additional pathways for dark repair in yeast, one capable of repairing X-ray and MMS damage to DNA, and another, possibly analogous to post-replication repair in bacteria, that competes with the other two for damaged regions in DNA.     

Studies on radiation-sensitive mutants of E. coli. 3. Participation of the rec system in induction of mutation by ultraviolet irradiation

Summary The bacterial recA gene participates in the induction by UV irradiation of the clear mutation of phage and the Lac^- mutation of bacteria. The necessary function is induced by irradiation of Rec⁺ bacteria and acts upon DNA irradiated with UV light.     

Photosensitization of Col Ib factor by 5-bromodeoxyuridine

Summary Col Ib factors which contain 5-bromodeoxyuridine — substituted DNA are highly sensitive to UV light. At the dose 3000 erg/mm² of UV light 95% of the survived bacteria became noncolicinogenic.     

Isolation and characterization of nucleotide excision repair deficient mutants of the entomopathogenic fungus, Beauveria bassiana

To better understand DNA repair in the entomopathogenic fungus Beauveria bassiana, three ultraviolet (UV) light sensitive mutants were isolated and characterized to be deficient in nucleotide excision repair (NER). The UV sensitive mutants were scored by comparison to survival of the parental isolate, GK2016, after 36 J/m² UV-C irradiation. At this dose, conidial survival of GK2016 was 98% and the mutants LC75, LC194, and LC85 had survival values of 63%, 45%, and 31%, respectively. An immunological method which measured the removal of pyrimidine-(6-4)-pyrimidone photoproducts during repair confirmed the decreased ability of LC75, LC194, and LC85 to remove these UV-induced dimers by NER. The mutants were also found to be deficient in NER at swollen/ germinating conidia and blastospore life cycle stages. The germination of the moderately UV sensitive mutant, LC75, was similar to that of the parental isolate, GK2016, after UV irradiation and incubation to enhance NER. The more sensitive mutants, LC194 and LC85 were 2.1- or 2.7-fold, respectively, less likely to germinate after UV irradiation based on their ability to carry out NER. These NER deficient mutants, the first to be derived from B. bassiana, reveal the importance of NER in spore survival post-UV irradiation.     

The Salmonella typbimurium RecJ function permits growth of P22 abc phage on recBCD+ hosts

Summary We describe recJ mutants of Salmonella typhimurium. The recJ gene maps between sufD and serA (min 62) and is transcribed counterclockwise. Unlike recJ mutants of Escherichia coli, recJ strains of S. typhimurium are sensitive to irradiation with UV light. This sensitivity is equivalent to or greater that that displayed by recBCD mutant strains. The residual ability of phage P22 abc (anti-recBCD) mutants to form plaques on recBCD ⁺ strains is eliminated in recJ hosts. Thus host RecJ function appears to substitute for the anti-RecBCD functions of phage P22 and may serve to limit RecBCD activity.     

Cyanobacteria toxins in the Salton Sea

Background

Sequenced archaeal genomes contain a variety of bacterial and eukaryotic DNA repair gene homologs, but relatively little is known about how these microorganisms actually perform DNA repair. At least some archaea, including the extreme halophile Halobacterium sp. NRC-1, are able to repair ultraviolet light (UV) induced DNA damage in the absence of light-dependent photoreactivation but this 'dark' repair capacity remains largely uncharacterized. Halobacterium sp. NRC-1 possesses homologs of the bacterial uvrA, uvrB, and uvrC nucleotide excision repair genes as well as several eukaryotic repair genes and it has been thought that multiple DNA repair pathways may account for the high UV resistance and dark repair capacity of this model halophilic archaeon. We have carried out a functional analysis, measuring repair capability in uvrA, uvrB and uvrC deletion mutants.

Results

Deletion mutants lacking functional uvrA, uvrB or uvrC genes, including a uvrA uvrC double mutant, are hypersensitive to UV and are unable to remove cyclobutane pyrimidine dimers or 6–4 photoproducts from their DNA after irradiation with 150 J/m² of 254 nm UV-C. The UV sensitivity of the uvr mutants is greatly attenuated following incubation under visible light, emphasizing that photoreactivation is highly efficient in this organism. Phylogenetic analysis of the Halobacterium uvr genes indicates a complex ancestry.

Conclusion

Our results demonstrate that homologs of the bacterial nucleotide excision repair genes uvrA, uvrB, and uvrC are required for the removal of UV damage in the absence of photoreactivating light in Halobacterium sp. NRC-1. Deletion of these genes renders cells hypersensitive to UV and abolishes their ability to remove cyclobutane pyrimidine dimers and 6–4 photoproducts in the absence of photoreactivating light. In spite of this inability to repair UV damaged DNA, uvrA, uvrB and uvrC deletion mutants are substantially less UV sensitive than excision repair mutants of E. coli or yeast. This may be due to efficient damage tolerance mechanisms such as recombinational lesion bypass, bypass DNA polymerase(s) and the existence of multiple genomes in Halobacterium. Phylogenetic analysis provides no clear evidence for lateral transfer of these genes from bacteria to archaea.     

Isolation and characterization of immunity temperature sensitive mutants of Enterobacter cloacae harbouring the cloacinogenic factor DF13

Summary Enterobacter cloacae cells, harbouring the cloacinogenic factor DF13 (Clo DF13) are immune to the cloacin they produce. We describe the isolation of eleven Enterobacter cloacae (Clo DF13) mutants, which are immune at 30°C, but lose their immunity at 42°C. The temperature sensitive immunity (Imm^ts) of these mutants appeared not to be transferable together with the Clo DF13 factor to non-cloacinogenic acceptor strains. Apparently host mutations are involved in the Imm^ts phenotype. Two different groups of Imm^ts mutants could be identified. Imm^tsC6 and Imm^tsC8, representatives of each group, have been compared with the parent strain. Imm^tsC6 as well as Imm^tsC8 is sensitive to crude cloacin at 42°C. Imm^ts mutants appeared to be also sensitive to cell components other than cloacin, indicating that the Imm^ts mutations may result in pleiotropic changes of cell properties.The Imm^tsC6 mutant is sensitive to deoxycholate and osmotic shock at 42°C. Spheroplasts of Imm^tsC6 cells incubated at 42°C are sensitive to DOC at 42°C and 30°C. The pleiotrophic changes of the Imm^tsC6 mutant may be attributed to a defect in the cell membrane.The Imm^tsC8, incubated at 42°C, is sensitive to deoxycholate, osmotic shock, ethylene-diaminetetraacetic acid, dyes, drugs and UV. Furthermore they form filaments. Imm^tsC8 spheroplasts are as sensitive to deoxycholate as the parent strain at 42°C. The pleiotropic changes in the phenotype of Imm^tsC8 are considered to be the result of a defect in the outer layers of the cell envelope, most likely the lipopolysaccharide layer.The possible relationship between the observed structural defects in the cell envelope of Imm^ts mutants and the phenomenon of immunity have been discussed.