Hydrocarbon-nitrosamine synergism as a possible amplifying factor in lung tumorigenesis by tobacco smoke.

Twenty-five coupled relaxation sawtooth oscillators have been investigated for the occurrence of mutual synchronization, using digital computer simulation. It is shown that mutual synchronization occurs only for relatively strong coupling. Synchronization depends heavily upon the precise waveform of the oscillators in the uncoupled state. The results are compared with a number of biological phenomena.     

Study of the organization of polytene chromosomes in the nuclei of Drosophila melanogaster pseudonurse cells with the use of the DNA library of the Drosophila orena chromocenter

The location of the Drosophila orena chromocenter in polytene chromosomes of pseudonurse cells of the D. melanogaster ovaries (the otu11 mutation) and salivary glands has been studied. Numerous sites of location of the D. orena chromocenter DNA have been found throughout the length of D. melanogaster chromosomes. The specific distribution of the binding sites for the DNA probe has made it possible to identify chromosomes and analyze their mutual positions in the three-dimensional space of the nuclei of pseudonurse cells. The mutual positions of chromosomes have been found to vary, the pericentromeric regions of different chromosomes differing from one another in associative ratios.     

Inferring connectivity of genetic regulatory networks using information-theoretic criteria

Recently, the concept of mutual information has been proposed for inferring the structure of genetic regulatory networks from gene expression profiling. After analyzing the limitations of mutual information in inferring the gene-to-gene interactions, this paper introduces the concept of conditional mutual information and based on it proposes two novel algorithms to infer the connectivity structure of genetic regulatory networks. One of the proposed algorithms exhibits a better accuracy while the other algorithm excels in simplicity and flexibility. By exploiting the mutual information and conditional mutual information, a practical metric is also proposed to assess the likeliness of direct connectivity between genes. This novel metric resolves a common limitation associated with the current inference algorithms, namely the situations where the gene connectivity is established in terms of the dichotomy of being either connected or disconnected. Based on the data sets generated by synthetic networks, the performance of the proposed algorithms is compared favorably relative to existing state-of-the-art schemes. The proposed algorithms are also applied on realistic biological measurements, such as the cutaneous melanoma data set, and biological meaningful results are inferred.     

Hyaluronate diffusion in semidilute solutions

Analysis of the mutual diffusion coefficient of hyaluronate reveals that it rapidly increases with increasing concentration or decreasing ionic strength. The mutual diffusion coefficients analyzed by boundary relaxation in the analytical ultracentrifuge by either Raleigh interference optics or absorption optics (through the use of fluorescein-labeled hyaluronate) yielded similar values. The theoretical treatment of the mutual diffusion coefficient has been analyzed in terms of experimentally measured intradiffusion coefficients and thermodynamic virial coefficients. Only approximate agreement between theory and experiment was found. The concept of formation of transient statistical network structures in semidilute solutions of hyaluronate was applied to evaluate a critical concentration at which network formation occurs. This has been discussed in relation to the marked decrease in the intradiffusion coefficient of hyaluronate with concentration. The formation of network structures in hyaluronate was found not to preclude the hyaluronate undergoing extremely rapid rates of mutual diffusion (with diffusion coefficients ～30 × 10^?11 m² s¹) under conditions of relatively large initial chemical potential gradients. Measurements of the unidirectional flux of hyaluronate for nonzero gradients demonstrated their marked sensitivity to the magnitude of the concentration difference across the boundary. An experimental feature of the unidrectional diffusion coefficients of hyaluronate is that they may be analyzed purely in terms of mutual and intradiffusion processes. The backflux diffusion coefficient (describing the flux against the imposed concentration gradient) appeared identical with the intradiffusion coefficient. The analysis of the various sources of errors made in this study suggests that the magnitude of the diffusion coefficients measured may be regarded only as approximate.     

Dynamics of additional food provided predator–prey system with mutually interfering predators

Use of additional/alternative food source to predators is one of the widely recognised practices in the field of biological control. Both theoretical and experimental works point out that quality and quantity of additional food play a vital role in the controllability of the pest. Theoretical studies carried out previously in this direction indicate that incorporating mutual interference between predators can stabilise the system. Experimental evidence also point out that mutual interference between predators can affect the outcome of the biological control programs. In this article dynamics of additional food provided predator–prey system in the presence of mutual interference between predators has been studied. The mutual interference between predators is modelled using Beddington–DeAngelis type functional response. The system analysis highlights the role of mutual interference on the success of biological control programs when predators are provided with additional food. The model results indicate the possibility of stable coexistence of predators with low prey population levels. This is in contrast to classical predator–prey models wherein this stable co-existence at low prey population levels is not possible. This study classifies the characteristics of biological control agents and additional food (of suitable quality and quantity), permitting the eco-managers to enhance the success rate of biological control programs.     

Quantifying the information transmitted in a single stimulus

Information theory - in particular mutual information- has been widely used to investigate neural processing in various brain areas. Shannon mutual information quantifies how much information is, on average, contained in a set of neural activities about a set of stimuli. To extend a similar approach to single stimulus encoding, we need to introduce a quantity specific for a single stimulus. This quantity has been defined in literature by four different measures, but none of them satisfies the same intuitive properties (non-negativity, additivity), that characterize mutual information. We present here a detailed analysis of the different meanings and properties of these four definitions. We show that all these measures satisfy, at least, a weaker additivity condition, i.e. limited to the response set. This allows us to use them for analysing correlated coding, as we illustrate in a toy-example from hippocampal place cells.     

Study of the organization of polytene chromosomes in the nuclei of <Emphasis Type="Italic">Drosophila melanogaster</Emphasis> pseudonurse cells with the use of the DNA library of the <Emphasis Type="Italic">Drosophila orena</Emphasis> chromocenter

The location of the Drosophila orena chromocenter in polytene chromosomes of pseudonurse cells of the D. melanogaster ovaries (the otu11 mutation) and salivary glands has been studied. Numerous sites of location of the D. orena chromocenter DNA have been found throughout the length of D. melanogaster chromosomes. The specific distribution of the binding sites for the DNA probe has made it possible to identify chromosomes and analyze their mutual positions in the three-dimensional space of the nuclei of pseudonurse cells. The mutual positions of chromosomes have been found to vary, the pericentromeric regions of different chromosomes differing from one another in associative ratios.     

Does mutual sexual selection explain the evolution of head crests in pterosaurs and dinosaurs?

Hone, D.W.E., Naish, D. & Cuthill, I.C. 2011: Does mutual sexual selection explain the evolution of head crests in pterosaurs and dinosaurs? Lethaia, Vol. 45, pp. 139–156. Cranial ornamentation is widespread throughout the extinct non‐avialian Ornithodira, being present throughout Pterosauria, Ornithischia and Saurischia. Ornaments take many forms, and can be composed of at least a dozen different skull bones, indicating multiple origins. Many of these crests serve no clear survival function and it has been suggested that their primary use was for species recognition or sexual display. The distribution within Ornithodira and the form and position of these crests suggest sexual selection as a key factor, although the role of the latter has often been rejected on the grounds of an apparent lack of sexual dimorphism in many species. Surprisingly, the phenomenon of mutual sexual selection – where both males and females are ornamented and both select mates – has been ignored in research on fossil ornithodirans, despite a rich history of research and frequent expression in modern birds. Here, we review the available evidence for the functions of ornithodiran cranial crests and conclude that mutual sexual selection presents a valid hypothesis for their presence and distribution. The integration of mutual sexual selection into future studies is critical to our understanding of ornithodiran ecology, evolution and particularly questions regarding sexual dimorphism. □Behaviour, Dinosauria, ornaments, Pterosauria, sexual selection.     

The mutual information: detecting and evaluating dependencies between variables

MOTIVATION: Clustering co-expressed genes usually requires the definition of 'distance' or 'similarity' between measured datasets, the most common choices being Pearson correlation or Euclidean distance. With the size of available datasets steadily increasing, it has become feasible to consider other, more general, definitions as well. One alternative, based on information theory, is the mutual information, providing a general measure of dependencies between variables. While the use of mutual information in cluster analysis and visualization of large-scale gene expression data has been suggested previously, the earlier studies did not focus on comparing different algorithms to estimate the mutual information from finite data. RESULTS: Here we describe and review several approaches to estimate the mutual information from finite datasets. Our findings show that the algorithms used so far may be quite substantially improved upon. In particular when dealing with small datasets, finite sample effects and other sources of potentially misleading results have to be taken into account.     

Emergence of adaptability to time delay in bipedal locomotion

Based on neurophysiological evidence, theoretical studies have shown that locomotion is generated by mutual entrainment between the oscillatory activities of central pattern generators (CPGs) and body motion. However, it has also been shown that the time delay in the sensorimotor loop can destabilize mutual entrainment and result in the failure to walk. In this study, a new mechanism called flexible-phase locking is proposed to overcome the time delay. It is realized by employing the Bonhoeffer–Van der Pol formalism – well known as a physiologically faithful neuronal model – for neurons in the CPG. The formalism states that neurons modulate their phase according to the delay so that mutual entrainment is stabilized. Flexible-phase locking derives from the phase dynamics related to an asymptotically stable limit cycle of the neuron. The effectiveness of the mechanism is verified by computer simulations of a bipedal locomotion model.     

Purine and pyrimidine metabolism in Francisella tularensis

The assimilation and mutual transformation of exogenous purine and pyrimidine bases and their nucleosides in the known subspecies of F. tularensis have been studied by means of radio-labeled compounds. The possibility of using the specific features of the metabolism of these compounds in F. tularensis, established in this study, for taxonomy and differential diagnosis has been demonstrated.     

Groups of bonds determining the configuration of the thylakoid system

Four groups of bonds determining the configuration of the thylakoid system have been established. The hypothesis presented here postulates the following. 1. There exist continuous lateral protein-protein interactions (bonds) all over the thylakoid membrane. 2. Lateral protein bonds are subdivided into two independent groups - lateral bonds of outer and inner membrane leaflets. 3. The configuration of a single thylakoid is determined by the mutual action of lateral and interlumenal bonds of the inner membrane leaflet, and the configuration of the thylakoid system of a chloroplast is determined by the mutual action of lateral and intermembrane (stacking) bonds of the outer membrane leaflet.     

Subtle social cues, explicit incentives and cooperation in social dilemmas

Subtle contextual social cues and the explicit incentive structure of social dilemmas are two important, but fundamentally different classes of determinants of cooperative behavior. The former provides subjective social information regarding the likelihood of attaining mutual cooperation by shaping one's expectations of the cooperative behavior of the interacting party. The latter provides objective, ecological information about the strategic opportunities offered by the situation. In prior research, both classes have generally been studied in isolation, hampering insight into how social judgments and ecological opportunities interact in shaping cooperation. To fill in this gap we set up a repeated mixed-motive game in which we manipulate subtle social cues and the incentive structure of the game simultaneously. We develop the hypothesis that social information is less important in shaping mutual cooperation of two team members when the incentive structure is such that it contains natural synergies. In contrast, when the incentive structure offers no synergy, “rational contracting” is hampered and social cues are essential for mutual cooperation to develop. The evidence we present in this paper is consistent with this hypothesis.     

Anthropology and psychiatry

In this paper anthropology and psychiatry are defined as well as their scientific area, their methods and research objectives; the high level of their mutual thematic and methodological complementarity has been emphasized. The sociocultural factors which are inherent in the area of cultural anthropology can affect mental health in a number of ways: by forming a certain personality type that is predisposed for a certain type of disorder, by an education model which increases the frequency of some disorders, by criticism and sanctions of a certain behaviour that is actually desirable from the point of view of mental health preservation, by supporting and rewarding a behaviour model that is harmful for mental health; by its complexity and, in some of the segments, by mutual contradictions they can cause mental disorders; by forming symptoms of mental disorders i.e. by a pathoplastic action through which they become an area of scientific interest of cultural psychiatry. Anthropology directs psychiatry towards creating preventive and therapeutic programs that accept the mutual influence and interconnectedness of socio-cultural conditions and the mental health status.     

Vocal rate as an assessment process during fallow deer contests

Two types of model propose that strategic decisions during contests are determined either by (i) a mutual-assessment process or (ii) a self-assessment process. Vocal signals are thought to convey information about the competitive abilities of individuals, the ultimate function of which is a reduction in costs associated with fighting consistent with the principle of mutual assessment. Nevertheless, the limited evidence that male ungulates engage in mutual assessment of vocal rates during dyadic contests has been questioned. Therefore, we examined the vocal rates of winners and losers during escalated dyadic contests between male fallow deer in order to further inform on this issue. Our results showed that winners and losers did not differ in vocal rate. The best model fit that accounted for individual vocal rates included a preponderance of factors related to the opponent indicating that contestants were attending to their opponent during fights. Vocal rate was, therefore, dependent on estimates of opponent quality without reference to self, supporting an 'opponent-only' rather than a mutual assessment process.     

POLYSACCHARIDE RELEASE BY APHANOTHECE HALOPHYTICA INHIBITS CYANOBACTERIA/CLAY FLOCCULATION1

Many microalgae release polysaccharides, but the effects of the polysaccharides on mutual flocculation of microalgae and clay in aquatic environments have not been well studied. Aphanothece halophytica Frémy is a bloom‐forming cyanobacterium in salterns and can release large amounts of polysaccharide (AH‐RPS). In the present study, we investigated the effect of AH‐RPS on mutual flocculation of cyanobacterium and clay and further explored the mechanisms by which AH‐RPS affected mutual flocculation. We determined that AH‐RPS possessed clay‐dispersing activity as defined as the ability to inhibit the flocculation and sedimentation of clay suspensions in water. Supplementation of AH‐RPS in cyanobacterial cell suspensions and in the culture media containing the same kaolin clay concentration dose dependently decreased flocculation of cyanobacterial cells and increased clay‐dispersing activity. These findings indicate that the clay‐dispersing activity of AH‐RPS was related to its inhibitory effect on mutual flocculation of cyanobacterial cells and clay particles. Moreover, the clay‐dispersing activity of AH‐RPS was stable from pH 3 to pH 10 and was increased by adding NaCl, MgCl₂, CaCl₂, or low concentrations of KCl (up to 0.4 M). Taken together, our data suggest that AH‐RPS might maintain its clay‐dispersing activity and inhibit mutual flocculation of microalgae and suspended clay in saltern brine.     

Structure of a beheaded 30 S ribosomal subunit from Thermus thermophilus.

The 22 S ribonucleoproten particles containing the 5' (body) and the central (platform) domains of the Thermus thermophilus 30 S subunit has been studied by sedimentation, neutron scattering and electron microscopy. The RNP particles have been obtained by oligonucleotide-directed cleavage of 16 S RNA with ribonulease H in the region of the 900th nucleotide of the protein-deficient derivatives of the 30 S subunits. It is shown that these RNP particles are very compact, though their form and dimensions differ slightly from those expected from the electron microscopy model of the 30 S subunit beheaded by computer simulation. The particles are subdivided into two structural domains whose mutual arrangement differs from that of the corresponding morphological parts of the native 30 S subunit. Electron microscopy demonstrates that the mutual arrangement of domains in the RNP particles is not strictly fixed suggesting that interaction with the third domain of the 30 S subunit is a requisite for their correct fitting.     

Ionic channels: modulation by G proteins and by phosphorylation.

The gating of ion channels may be modulated by G proteins or by phosphorylation. Direct coupling between G proteins and ion channels has been shown in excised patches of membrane. Steps must now be taken to study the protein domains of G proteins and ion channels involved in the mutual interaction. The concept of channel modulation by protein kinases has recently been extended to include additional types of ion channel.     

主要干性基因与衰老相关基因表达水平的相互拮抗关系

目前广泛地利用传统的体细胞衰老理论和方法对成体干细胞衰老进行研究,忽视了成体干细胞特有的自我更新功能和相应的干性基因的作用.干性基因的下调可能是导致间充质干细胞衰老的主要原因.通过查阅相关资料发现主要干性基因与衰老相关基因表达水平的相互拮抗关系,这体现在以下4个方面:a.干细胞衰老伴随着干性基因的下调;b.干性基因表达抑制细胞的衰老;c.干性基因抑制衰老相关基因的表达;d.抑制衰老相关基因促进干性基因的表达.干性基因与衰老相关基因的表达水平存在相互拮抗关系,这为成体干细胞衰老可能源于成体干细胞的干性降低的观点提供了坚实的分子基础.