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1.
史晓红  郭平仲 《遗传》2003,25(3):302-306
利用太谷核不育基因构建的遗传变异丰富的基础群体DNS2,进行了连续5轮歧化选择。本论文从不同的世代中,选择了10个子群体进行RAPD分析。采用7个引物扩增出116个位点,从基因频率和表型带两个角度的分析都表明,群体具有丰富的遗传变异。整个群体总的多态位点百分率达88.79,总杂合度为0.3143。子群体内(间)遗传距离的结果显示:子群体内的遗传差异小于子群体间的遗传差异;各选择子群体与未选群体间都有较大的遗传距离;随着选择轮次的增加,株高选择子群体间的遗传距离逐渐增大;对同一性状进行选择的子群体间世代内(间)平均遗传距离小于对不同性状进行选择的子群体内(间)的遗传距离。RAPD分子聚类结果显示出对同一性状进行选择的子群体聚在一起,反映了对株高选高的选择效果比较明显。 Abstract:A base population was established through multi-parent random crossing by using Taigu dominant male-sterile wheat,and then five cycles of 2-way selection for four quantitative characters were conducted.The dynamic changes of genetic structures in the open-pollinated wheat population were examined by RAPD technique.Seven primers in RAPD analysis amplified 116 sites.The results of gene frequencies and phenotypic bands showed abundant genetic variations existed in the population.The percentage of polymorphic loci was 8879,and the average heterozygosity was 0.3143 in the whole population.The genetic distance of RAPD showed as follows :① The genetic distance within a subpopulation was lower than that between every two subpopulations.② Each subpopulation had considerable divergence compared with unselected population.③ The genetic distances between the subpopulations which were selected for plant height gradually increased accompanied with the selection.④The genetic distance between subpopulations which were selected for the same character was lower than that were selected for different characters both in the same generation and among different generations.The cluster results of RAPD genetic distance demonstrated that the subpopulations selected for the same character going to one cluster.It also showed that the selective effect of increasing plant height was obvious.  相似文献   

2.
Genetic structure and differentiation of Reaumuria soongorica (Pall.) Maxim population from the desert of Fukang, Xinjiang, were assessed by means of random amplified polymorphic DNA (RAPD) markers. High genetic diversity and differentiation were revealed in the population of R. soongorica by 15 random primers. One hundred and thirty-six individuals from seven subpopulations were sampled in the study. Seventy-one loci have been detected, and among them 69 were polymorphic. The mean proportion of polymorphic loci (PPB) was 97.18%. The analyses of Shannon information index (0.307 5), Nei抯 gene diversity (0.312 7) and GST (0.312 0) indicated that there were more genetic variations within the subpopu-lations than those among the subpopulations. The results of AMOVA analysis showed that 61.58% of the genetic variations existed within subpopulations, and 38.02% among the subpopulations. The gene flow among the subpopulations of R. soongorica (Nm = 1.102 8) was much less than that of the common anemophytes (Nm = 5.24), so genetic differentiation among the subpopulations occurred to some extent. Additionally, through the use of clustering and the correlation analyses, we found that the genetic struc-ture of natural population of R. soongorica was related to some ecological factors (soil factors mainly) of the oasis-desert transition zone. The genetic diversity level of R. soongorica had negative correlation with the content of total soil P and Cl- significantly (P<0.05). On the contrary, it had significant positive correlation with CO32- (P<0.05), showing that the distribution of the individuals of R. soongorica in the sampled areas correlates with certain soluble salt. Furthermore, the genetic diversity of the natural population of R. soongorica increased with the decreasing of the content of soil organic matters, water, total N and total P in soil. The paper concluded that the microenvironment ecological factors played an important role in the adaptive evolution of R. soongorica population.  相似文献   

3.
Omphalogramma souliei Franch. is an endangered perennial herb only distributed in alpine areas of SW China. ISSR markers were applied to determine the genetic variation and genetic structure of 60 individuals of three populations of O. souliei in NW Yunnan, China. The genetic diversity at the species level is low with P=42.5% (percentage of polymorphic bands) and Hsp=0.1762 (total genetic diversity). However, a high level of genetic differentiation among populations was detected based on different measures (Nei's genetic diversity analysis: Gst=0.6038; AMOVA analysis: Fst=0.6797). Low level of genetic diversity within populations and significant genetic differentiation among populations might be due to the mixed mating system in which xenogamy predominated and autogamy played an assistant role in O. souliei. The genetic drift due to small population size and limited current gene flow also resulted in significant genetic differentiation. The assessment of genetic variation and differentiation of the endangered species provides important information for conservation on a genetic basis. Conservation strategies for this rare endemic species are proposed.  相似文献   

4.
不同地区库蚊复组群体的同工酶遗传多样性研究   总被引:2,自引:0,他引:2  
张柯  叶镇清  乔传令 《遗传》2004,26(2):172-176
采用水平切片淀粉凝胶电泳的方法,对分布于我国5省的8个库蚊复组(Culex pipiens complex)野生群体的遗传多样性进行研究,分析了4个酶系统7个基因座(ME、MDH-1、MDH-2、MDH-3、GPD、EST-2、EST-3)的酶谱资料。结果显示:(1)群体内存在不同程度的遗传变异(He为0.098~0.41);(2)较低的基因流水平(Nm=0.64)使遗传漂变起主要作用,造成群体之间的遗传分化(Gst=0.303),而总群体的遗传多样性相对富集于群体之内(Hs/Dst=2)。(3)库蚊群体的遗传结构属于距离隔离模式。(4)群体间的遗传一致性(或遗传距离)反映出群体间的遗传分化程度,也表明与地理位置存在对应关系。Abstract: Eight field populations of Culex pipiens complex collected from five provinces (Guangdong, Henan, Shandong, Beijing and Yunnan) in 2001 were used to study genetic diversity by starch gel electrophoresis. Data from seven loci (ME、MDH-1、MDH-2、MDH-3、GPD、EST-2、EST-3) of four isozymes were analyzed by software Biosys2.0 and FSTAT(Version 2.9.3). The results were as follows: (1) The values of He (from 0.098 to 0.41) indicated genetic variabilities of different degree in populations.(2)The low level of gene flow (Nm=0.64) could not prevent genetic drift to cause the gene differentiation between populations. The genetic diversity between populations attributed to the genetic diversity of total populations is small (Gst =0.303), and the great part is accumulated within populations (Hs/Dst=2). (3) The genetic structure of Culex pipiens complex population was the isolation-by-distance model. (4) The genetic identity (or genetic distance) revealed the scale of genetic differentiation between populations which related to the collection sites.  相似文献   

5.
我国主要地方绵羊品种随机扩增多态DNA研究   总被引:1,自引:0,他引:1  
对蒙古羊、湖羊、滩羊、小尾寒羊、乌珠穆沁羊、藏绵羊、阿勒泰羊7个地方绵羊品种和无角陶赛特羊、德国美利奴羊、萨福克羊3个引入品种基因组DNA进行了RAPD分析。结果表明:(1)RAPD可作为一种有效的标记用于绵羊品种之间遗传亲缘关系的分析。(2)在所使用的43种随机引物中,有35种引物扩增出多态谱带,多态频率为66.24%,说明RAPD技术用于研究绵羊核DNA的遗传变异具有较高的检出率和灵敏度。(3)总群体平均遗传多样性指数(HSP)为0.9139,说明绵羊群体具有较为丰富的遗传多样性。(4)我国地方绵羊品种间的分子聚类关系与其所处的地理位置、考古学结果,以及细胞遗传学研究结果基本一致,引入品种间的分子聚类关系也与其育成史基本一致。 Abstract:The genetic polymorphism and relationship of 7 indigenous sheep breeds of China and 3 imported sheep breeds were studied using random amplified polymorphic DNA (RAPD).The results indicated that the RAPD was an effective marker for the analysis of genetic relationship among sheep breeds.Among 43 arbitrary primers,35 were polymorphic.The percentage of polymorphic markers was 66.24%,which indicated that the RAPD had higher efficiency of polymorphism detection and sensitivity in studying the genetic variation among sheep breeds.The average index of genetic polymorphism for whole population (Hsp) was 0.9139,which showed that the genetic polymorphism was abundant between sheep populations.The genetic relationship between different indigenous sheep breeds in China was in accord with their localities,the results from archeology and cytogenetics and the genetic relationship between imported sheep breeds was in accord with their breeding history.  相似文献   

6.
Genetic diversity analysis by RAPD in Cathaya argyrophylla Chun et Kuang   总被引:5,自引:0,他引:5  
Genetic diversity level of Cathaya argyrophylla was confirmed by random amplified polymorphic DNA (RAPD) markers. Seventy five samples (individuals), collected from Hunan and Sichuan provinces of China were used in the study. 21 10-mer oligonucleotide primers detected 106 sites, and 34 (32% ) of them were polymor-phic. The level of genetic variation in C. argyrophylla was lower than those of other conifers, and was considered to be associated with the complexity of habitats. The percentages of polymorphic sites (PPS) in the Hunan and Sichuan pop-ulations were 18% and 25% respectively. 7.99% of genetic variation existed between the two populations; this value was higher than the mean value (6.8%) among populations in conifers displayed by allozyme. Some subpopulations of C. argyrophylla were greatly differentiated because of site mutation and genetic drift. The highest value of genetic dif-ference between subpopulations amounted to 16. 23% . In addition, a concept of diversity coefficient(DC), a value us  相似文献   

7.
波尔山羊杂交后代及其亲本随机扩增多态DNA研究   总被引:24,自引:4,他引:20  
利用随机扩增多态DNA技术研究了波尔山羊、唐山奶山羊、青龙本地山羊以及波尔山羊与这两个山羊群体杂交后代共计128个山羊个体的随机扩增多态DNA。结果表明:(1)总群体平均遗传多样性指数(Hsp)为0.6974,群体遗传分化指数为0.9706,山羊群体间平均遗传距离指数(0.1314~0.2052)明显大于群体内的相应值(0.0582~0.1440),上述结果说明,所研究山羊群体不仅具有较为丰富的遗传多样性,而且其核基因组遗传变异主要存在于群体间。(2)山羊群体间的分子聚类关系与各群体间的亲缘关系基本一致。 Abstract:The random amplified polymorphic DNA(RAPD)of 128 individuals was studied,which were from Boer goat, Tangshan dairy goat,Qinglong native goat and their hybrids crossbred with Boer goat.The average index of genetic polymorphism for whole population(Hsp)and the index of genetic differentiation were 0.6974 and 0.9706,respectively.The average index of genetic distance between populations(0.1314~0.2052)was significantly higher than that within populations(0.0582~0.1440).All of these indicated that the genetic polymorphism was not only abundant,but also the genetic variation was mainly existed between goat populations.The molecular dendrogram among goat populations was in accord with their genetic relationship.  相似文献   

8.
Variations in the trnK region of chloroplast DNA were investigated in the present study using polymerase chain reactionrestriction fragment length polymorphism to detect the genetic structure and to infer the possible glacial refugia of Ginkgo biloba L. in China. In total, 220 individuals from 12 populations in China and three populations outside China were analyzed, representing the largest number of populations studied by molecular markers to date. Nineteen haplotypes were produced and haplotype A was found in all populations. Populations in south-western China, including WC, JF, PX, and SP, contained 14 of the 19 haplotypes and their genetic diversity ranged from 0.771 4 to 0.867 6. The TM population from China also showed a high genetic diversity (H = 0.848 5). Most of the genetic variation existed within populations and the differentiation among populations was low (GsT = 0.2). According to haplotype distribution and the historical record, we suggest that populations of G. biloba have been subjected to extensive human impact, which has compounded our attempt to infer glacial refugia for Ginkgo. Nevertheless, the present results suggest that the center of genetic diversity of Ginkgo is mainly in south-western China and in situ conservation is needed to protect and preserve the genetic resources.  相似文献   

9.
Nine short tandem repeat (STR) markers on the X chromosome (DXS101, DXS6789, DXS6799, DXS6804, DXST132, DXST133, DXS7423, DXS8378, and HPRTB) were analyzed in four population groups (Mongol, Ewenki, Oroqen, and Daur) from Inner Mongolia, China, in order to learn about the genetic diversity, forensic suitability, and possible genetic affinities of the populations. Frequency estimates, Hardy-Weinberg equilibrium, and other parameters of forensic interest were computed. The results revealed that the nine markers have a moderate degree of variability in the population groups. Most heterozygosity values for the nine loci range from 0.480 to 0.891, and there are evident differences of genetic variability among the populations. A UPGMA tree constructed on the basis of the generated data shows very low genetic distance betweent Mongol and Han (Xi'an) populations. Our results based on genetic distance analysis are consistent with the results of earlier studies based on linguistics and the immigration history and origin of these populations. The minisatellite loci on the X chromosome studied here are not only useful in showing significant genetic variation between the populations, but also are suitable for human identity testing among Inner Mongolian populations.  相似文献   

10.
The genetic diversity of Stipa grandis P.Smirn and its relationship with the climatic variables were studied using the RAPD technique for 90 genes from five natural populations sampled in the Xilingol steppe, China. Sixteen oligonucleotides screened from 100 random primers were used to amplify 310 trackable RAPD loci, which were all polymorphic. By analyzing the RAPD data using POPGENE software, different geographic S. grandis populations were studied, which indicated a high level of genetic diversity, and the maximum variation was observed within the populations with a 28% variation observed among the populations. Using Pearson correlation analysis, significant (P < 0.05) or highly significant (P < 0.01) relationships were found between gene diversity indexes and temperature factors (≥10°C cumulative temperature in a year, annual mean temperature and mean temperature in January). Mantel's tests showed that there was no significant correlation between Nei's unbiased genetic distance and the geographic distance of S. grandis populations (r = 0.184, P = 0.261). However, there were significant or highly significant correlations between Nei's genetic distance and the several climatic divergences in pairwise S. grandis populations. All results indicated that natural selection resulting from variations in water and temperature was responsible for the adaptive eco-geographical differentiation indicated by the RAPD markers of different S. grandis populations, and that immigration and gene drift did not play an important role in affecting the differentiation of S. grandis populations.  相似文献   

11.
新疆阜康荒漠红砂种群遗传结构及其与生态因子的耦合关系   总被引:12,自引:0,他引:12  
应用RAPD标记技术对分布于新疆阜康荒漠的重要植物红砂(Reaumuria soongorica(Pall.)Maxim)种群遗传结构和遗传多样性进行了分析。15条随机引物对红砂7个亚种群的136个个体进行扩增,共检测71个位点,其中多态位点69个。研究结果表明:红砂种群的多态位点比率(PPB)为97.18%,显示出分布于过渡带的红砂种群内存在较高的遗传多样性。Shannon多样性指数(0.307 5)、Nei基因多样性指数(0.312 7)和基因分化系数(G_(ST)=0.312 0)揭示了红砂种群遗传变异多存在于亚种群内,而亚种群间的遗传分化则较小。红砂业种群间的基因流Nm=1.102 8,Nm>1但低于一般风媒传粉植物(Nm=5.24)的基因流水平,处于分化的临界状态。AMOVA分析说明红砂种群变异的61.58%存在于亚种群内,而亚种群间的变异占总变异的38.02%。另外,通过RAPD资料的聚类分析及相关性分析研究,发现红砂自然种群的遗传结构与绿洲荒漠过渡带的微生境生态因子(主要是土壤因子)相关,其中红砂亚种群遗传多样性水平与土壤中全磷和CI含量呈显著负相关,与CO_3~2含量呈显著正相关。而其它土壤生态因子则与红砂的遗传多样性指数的相关性均不显著(P>0.05)。表明红砂个体的分布可能与过渡带土壤的某些易溶性盐分相关。研究还发现,随着土壤中有机质、水分、全氮和全磷含量的减  相似文献   

12.
Randomly amplified polymorphic DNA (RAPD) analysis was used to investigate the genetic variation among populations, between populations, and within populations, relationships between genetic distance and geographic distance, and the molecular variation and population size. The effects of geographic and genetic distances, as well as of genetic differentiation and population size, on genetic variations of Leymus chinensis (Trin.) Tzvel. are discussed. The present study showed that there was significant RAPD variation between the Baicheng region population and the Daqing region population, with a molecular variance of 6.35% (P < 0.04), and for differentiation among area populations of the Daqing region, with a molecular variance of 8.78% (P < 0.002). A 21.06% RAPD variation among all 16 populations among two regions was found (P < 0.001), as well as 72.59% variation within populations (P < 0.001). Molecular variation within populations was significantly different among 16 populations.  相似文献   

13.
祁连山两侧中国沙棘不同居群的遗传多样性研究   总被引:1,自引:0,他引:1  
应用RAPD技术研究了祁连山中段中国沙棘(Hippophae rhamnoidoes ssp.sinensis)4个居群和1个对照居群的遗传多样性水平,探讨中国沙棘边缘居群的遗传变异以及天然屏障祁连山对中国沙棘居群遗传结构的影响。结果显示,祁连山地区中国沙棘居群水平的Nei’基因多样度(h)和Shannon多态信息指数(I)分别为0.2070和 0.297 4,基因分化系数(Gst)为0.319 3,均高于中国沙棘整个分布区的平均值,表明该地中国沙棘边缘居群遗传多样性水平及居群间的遗传分化都有增加的趋势;居群间每代迁移数(Nm=1.065 9)显著低于异交风媒植物(Nm= 5.380),表明祁连山的隔离对中国沙棘居群间的基因交流有限制作用,造成了该地中国沙棘边缘居群间较高的遗传分化。  相似文献   

14.
Randomly amplified polymorphic DNA (RAPD) analysis was used to investigate the genetic variation among populations, between populations, and within populations, relationships between genetic distance and geographic distance, and the molecular variation and population size. The effects of geographic and genetic distances, as well as of genetic differentiation and population size, on genetic variations of Leymus chinensis (Trin.) Tzvel. are discussed. The present study showed that there was significant RAPD variation between the Baicheng region population and the Daqing region population, with a molecular variance of 6.35% (P 〈 0.04), and for differentiation among area populations of the Daqing region, with a molecular variance of 8.78% (P 〈 0.002). A 21.06% RAPD variation among all 16 populations among two regions was found (P 〈 0.001), as well as 72.59% variation within populations (P 〈 0.001). Molecular variation within populations was significantly different among 16 populations.  相似文献   

15.
不同尺度下野大豆种群的遗传分化   总被引:30,自引:4,他引:26  
为了阐明不同尺度范围内野大豆种群的遗传分化情况,应用随机扩增多态性DNA(RAPD)方法,分别对我国5个纬度8个不同地点的野大豆(Glycine soja)种群及浙江金华地区5个野大豆种群,进行了分子生态学研究。根据RAPD数据计算相似系数及遗传距离并进行聚类分析,发现无论是不同纬度野大豆种群还是金华地区野大豆小种群均存在较高的遗传变异,且不同纬度野大豆种群间的遗传变异与地理纬度有一定正相关。在对金华地区野大豆种群遗传多样怀的研究,利用Shannon指数估算了5个野大豆种群的遗传多样性,发现大部分的遗传变异存在于野大豆种群间(78.5%),只有少部分的遗传变异存在于种群内。本就此探讨了不同尺度下野大豆种群的遗传多样性与环境因子的关系,并对其成因及维持机制进行了讨论。  相似文献   

16.
内蒙古中东部不同草原地带羊草种群遗传分化   总被引:10,自引:2,他引:8  
运用 RAPD技术对内蒙古不同草原地带分布的 5个羊草种群 (共 10 0个个体 )的遗传多样性进行分析。 31个随机引物(10 nt)在 5个羊草种群中共检测到 4 96个扩增片断 ,其中多态性片断 4 89个 ,总的多态位点百分率达 98.6 %。利用 Nei指数和Shannon指数估算了 5个种群的遗传多样性 ,并计算种群相似系数和遗传距离运用 UPGMA法进行聚类分析。结果表明 :无论是种群内还是种群间 ,羊草均存在较高的遗传变异 ,大部分的遗传变异存在于种群内 (Nei指数和 Shannon指数估算结果分别为 85 .4 %和 72 .5 % ) ,只有少部分的遗传变异存在于种群间 ;不同种群的遗传多样性存在差异 ,各种群的遗传多样性与其所处的地理位置具有显著的相关性 ;5个种群的平均遗传距离为 0 .5 0 95 ,变异范围为 0 .4 6 84~ 0 .5 4 76 ;聚类分析结果显示地理距离较近的种群遗传距离较小 ,首先聚在一起 ,而地理距离较远的种群遗传距离较大 ,说明羊草种群间的遗传分化与地理距离存在一定相关性 ;但地理距离最近的两个种群并未最先聚集 ,说明羊草种群间的分化还与其生境的异质性有关  相似文献   

17.
云南金钱槭形态变异与遗传变异的相关性研究   总被引:13,自引:1,他引:13  
对我国特有珍稀濒危保护植物云南金钱槭的形态变异水平、遗传变异模式以及两者之间的相关性进行了研究。形态学性状分析结果表明 :各居群形态性状变异系数的平均值从大到小排列为 :文山居群 (WSh)、屏边居群 (PB)、黑龙潭居群 (HL T)、蒙自居群 (MZ) ;文山居群与屏边、黑龙潭、蒙自居群间已产生显著或极显著水平的形态差异 ,而后三者间的差异未达显著水平。RAPD分析检测到 10 3个位点 ,其中多态位点 84个 ,云南金钱槭物种水平的多态位点比率为 81.5 5 % ,与其它珍稀濒危植物相比该种的遗传多样性水平不低。 AMOVA和 N ei基因多样性指数分析显示 ,尽管大部分遗传变异仍存在于居群内 (分别为5 7.86 %、5 7.33% ) ,但居群间的遗传变异已达较高水平 (分别为 4 2 .14 %、4 2 .6 7% )。相关分析结果显示 ,云南金钱槭的形态变异与海拔、土壤有机质等生态因子有着显著或极显著水平的相关性 ,但与遗传变异的相关性未达显著水平 ,说明云南金钱槭的形态变异虽然具有一定的遗传基础 ,但可塑性及环境压力对形态变异的产生作用更大一些。基于形态性状和 RAPD数据的聚类分析则进一步说明 ,云南金钱槭的形态变异受到环境因子的强烈影响而与遗传背景的关系不显著  相似文献   

18.
Psathyrostachys huashanica Keng is a perennial grass and belongs to genus Psathyrostachys under Triticeae.sathyrostachys is found in the center of Middle Asia and the Caucasus Mountain,while P.huashanica,a species endemic to China,is only located in Mt.Hua in the Shaanxi province,China.At present,the population of this species is decreasing,and reaching the edge of extinction.Due to the limitation in distribution and the importance as breeding material for germplasm storage,it has been considered as first class among the national protected rare plants.For this reason,the present study is significant in probing plant flora,origin and evolution of Triticeae,and crop breeding.Randomly amplified polymorphic DNA (RAPD)markers were used to analyze the genetic structure and differentiation of P.huashanica populations sampled in three valleys (Huangpu,Xian,and Huashan Valleys)in Mr.Hua.One hundred and twenty-two RAPDfragments were obtained in all 266 individuals with 20 primers with a mean of 6.1 (2-10)fragments per primer.The percentage of polymorphic loci (PPB)was 60.66%in Huangpu Valley,90.98%in Xian Valley,95.08%in Huashan Valley,and the total PPB was 95.08%,which indicated a highly genetic variability of P.huashanica.The Shannon's Information index and GST were 0.3306 and 0.3263,respectively,indicating that there were more genetic variations within the subpopulations than those among the subpopulations.The gene flow among the subpopulations of P.huashanica (Nm=1.0322)was much less than that of the common anemophytes (Nm=5.24).Mean genetic distance is 0.1571(range:0.0022-0.2901).The highest value of genetic distance was found between the subpopulation (hp1)of Huangpu Valley and the highest altitude subpopulation (h8)of Huashan Valley.Correlation analysis detected significant correlation between genetic distance and vertical distance of altitude.Clustering analysis and principal coordinate analysis revealed the genetic differentiation among the populations of P.huashanica.Differentiation mainly occurred between the higher altitude subpopulations and the lower altitude subpopulations,suggesting that altitude might be the major factor that restricted the gene flow between different altitude subpopulations and resulted in differentiation of subpopulations.  相似文献   

19.
运用随机扩增多态DNA(RAPD)技术,对天目木兰(Magnolia amoena)居群的遗传多样性进行了研究.从40个10-mer随机引物中筛选出14个能得到清晰、稳定扩增带的引物进行扩增,14个引物共检测了94个位点,其中多态性位点为23,占24.4%,计算了12个居群之间的遗传相似度和遗传距离,并运用UPGMA法进行了聚类分析,结果显示相同严地个体间(居群内)的遗传距离较小,遗传多样性水平很低;不同产地个体间(居群间)遗传距离较大,遗传多样性水平较前者高,即天目木兰个体间遗传多样性水平与它的地理分布有关,天目木兰总体较低的遗传多样性是导致它濒危的原因之一。  相似文献   

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