Actinomycete complexes in the rhizosphere of winter rye on soddy podzolic soil

The structure of actinomycete complexes in the rhizosphere of winter rye (Secale cereale L.) varieties originating from different ecosystems and geographical zones was studied in field experiments on soddy podzolic soil. In addition to streptomycetes, the complexes studied contained actinomycetes of the genera Micromonospora and Streptosporangium, represented at high occurrence and comparable abundance rates. The rhizosphere of most of the studied rye varieties was dominated by micromonosporas. The antifungal potential of mycelial prokaryotes associated with winter rye was assessed. The taxonomic and functional structure of actinomycete complexes was shown to be similar in rye varieties originating from the nonchernozem zone of Russia. However, the actinomycete complex proved to be much different in the rye variety that developed in the steppe zone of the lower Volga region.__________Translated from Mikrobiologiya, Vol. 74, No. 2, 2005, pp. 271–277.Original Russian Text Copyright © 2005 by Shirokikh, Merzaeva.     

Actinomycete complexes in the rhizosphere of winter rye on soddy podzolic soil

The structure of actinomycete complexes in the rhizosphere of winter rye (Secale cereale L.) varieties originating from different ecosystems and geographical zones was studied in field experiments on soddy podzolic soil. In addition to streptomycetes, the complexes studied contained actinomycetes of the genera Micromonospora and Streptosporangium, represented at high occurrence and comparable abundance rates. The rhizosphere of most of the studied rye varieties was dominated by micromonosporas. The antifungal potential of mycelial prokaryotes associated with winter rye was assessed. The taxonomic and functional structure of actinomycete complexes was shown to be similar in rye varieties originating from the nonchernozem zone of Russia. However, the actinomycete complex proved to be much different in the rye variety that developed in the steppe zone of the lower Volga region.     

Abundance,biomass, structure,and activity of the microbial complexes of minerotrophic and ombrotrophic peatlands

A very large microbial biomass was revealed in peat bogs by means of fluorescence microscopy. In ombrotrophic peatlands, the pool of the dry-weight microbial biomass in the 1.5-m layer constituted 3–4 t/ha and was twice as high as in the minerotrophic peat bogs. Fungal biomass was predominant (55–99%) in ombrotrophic peatlands, while bacterial biomass predominated (55–86%) in minerotrophic peatlands. In ombrotrophic peatlands, the microbial biomass was concentrated in the upper layers, while in minerotrophic peatlands, it was uniformly distributed in the bulk. After drainage, the microbial pool in the ombrotrophic peatlands increased twofold; that in the minerotrophic peatlands remained at the same level. The potential activity of nitrogen fixation and denitrification was revealed across the whole profile of the peatlands. The average values of these potential activities were five times higher in the minerotrophic peatlands, where bacterial biomass predominated.     

Abundance, biomass, structure, and activity of the microbial complexes of minerotrophic and ombrotrophic peatlands

Very large microbial biomass was revealed in peat bogs by means of fluorescence microscopy. In ombrotrophic peatlands, the pool of the dry-weight microbial biomass in the 1.5-m layer constituted 3-4 t/ha and was twice as high as in the minerotrophic peat bogs. Fungal biomass was predominant (55-99%) in ombrotrophic peatlands, while bacterial biomass predominated in minerotrophic peatlands (55-86%). In ombrotrophic peatlands, the microbial biomass was concentrated in the upper layers, while in minerotrophic peatlands, it was uniformly distributed in the bulk. After drainage, the microbial pool in the ombrotrophic peatlands increased twofold; that in the minerotrophic peatlands remained at the same level. The potential activity of nitrogen fixation and denitrification was revealed across the whole profile of the peatlands. The average values of these potential activities were five times higher in the minerotrophic peatlands, where bacterial biomass predominated.     

Permeability of the suberized mestome sheath in winter rye

Mestome sheath cells of winter rye (Secale cereale L. cv Puma) deposit suberized lamellae in their secondary cell walls. Histochemical tests including acid digestion and staining with Sudan IV and Chelidonium majus root extract were used to detect the presence of suberin in the primary cell wall. There was no evidence of a Casparian band between adjacent mestome sheath cells. Fluorescent dye techniques were used to trace solute movement through the rye leaf apoplast. Calcofluor white M2R, a fluorescent dye which binds to cell walls as it moves apoplastically, proved to be too limited in its mobility in leaves to test mestome sheath permeability. Trisodium 3-hydroxy-5,8,10 pyrene trisulfonate, a fluorescent dye which is mobile in the apoplast, moved easily up the vascular bundles in the transpiration stream, and diffused outward from the veins to the epidermal cell walls within minutes of reaching a particular level in the leaf. We conclude that the suberized mestome sheath of rye leaves is freely permeable to solutes moving apoplastically through radial primary cell walls.     

The occurrence and effects of red clover necrotic mosaic virus in red clover (Trffbliumpratense)

In 1976, red clover necrotic mosaic virus (RCNMV) was identified in red clover variety trials at the Scottish Colleges of Agriculture and at the trial centres of the National Institute of Agricultural Botany (NIAB) in Northumberland, Dyfed, Devon and Cambridge. In 1977, RCNMV was also found in two commercial crops of red clover in South Wales. The only previous finding of this virus in Britain was in 1971.
In red clover leaves RCNMV causes veinal chlorosis, often followed by severe necrosis and deformation; the plants become stunted. All cultivars tested were infected either in field or glasshouse experiments and three of the four most susceptible cultivars were tetraploids. Yield losses in cv. Hungaropoly averaged 57% over three cuts. RCNMV was transmitted manually but not through seed or by aphids {Acyrthosiphon pisum and Myzus persicae) or weevils (Apion spp. and Sitona lineatus). Seedlings became infected when grown in pots containing RCNMV-infected plants or soil from infected sites, and the roots of infected test seedlings contained an Olpidium sp. which may be the vector.
White clover mosaic virus (WCMV), also common in red clover at some sites, was less damaging than RCNMV and in a glasshouse experiment decreased yield by only 22%. An unidentified seed-borne virus with spherical particles c. 33 nm in diameter was the only virus detected in clover seedlings screened for RCNMV.     

Leaf area index, canopy structure and photosynthesis of red clover (Trifolium pratense L.)

Abstract. The influence of leaf age, total leaf area and its dispersion in space on canopy photosynthesis were studied using microswards of red clover ( Trifolium pratense L.) which were established in the greenhouse. Two varieties, Renova (flowering) and Molstad (non-flowering), were sown in separate plastic boxes at densities of 225, 400 and 625 plants per m².
Vertical distribution of photosynthetically active radiation (PAR), leaf area, leaf age and ¹⁴CO₂-fixation were determined periodically. Net photosynthesis and dark respiration of canopies were measured. Maximum photosynthetic capacity of individual leaves was measured on plants taken from the intact canopy or from plants where shading of the growing leaves had been prevented.
Net photosynthetic rate of canopies increased linearly with leaf area index (LAI) up to an LAI of 3.5 and then declined at higher LAI, independent of variety and sowing density. Below the optimum LAI, net photosynthesis depended mainly on interception of PAR. Decrease in canopy photosynthesis above the optimum LAI was due to a higher proportion of old leaves with decreased photosynthetic capacity, and not to an increase in respiring plant parts. It is concluded that LAI and position of leaf age categories in the canopy are more important than vertical distribution of leaf area in determining canopy photosynthesis of red clover.     

Economic damage by Limothrips denticornis in rye, triticale and winter barley

Abstract:  Limothrips denticornis is a common thrips infesting rye, triticale and winter barley in Sweden. Field experiments with insecticides were carried out 1983–1996 in farmers' fields to investigate the damage to the plant and to evaluate the relationship between thrips density and crop yield losses. The total number of experiments was 99 in rye, 41 in triticale and nine in winter barley. The mean number of thrips per leaf sheath was around 8 in all three crops. The highest number found was 27 thrips per leaf sheath. The population density in the leaf sheath was correlated with the damage observed on the leaf sheath as percentage damaged surface. The effect on the leaf sheath alone contributed to a significant proportion of the yield loss. Thrips in the ear and aphids also contributed to the damage but with multiple regression methods it was possible to estimate the damage done solely by L. denticornis . The yield loss caused by L. denticornis was about the same in all three crops, with a variation between 21 and 26 kg per thrips per leaf sheath and hectare. Compared with the yield loss for aphids, which is about 40 kg per aphid per tiller and hectare, this is considerably lower. The economic injury level was found to be about 14 thrips per straw. The economic threshold for L. denticornis has to be decided when the females are flying into the crop and it was found to be 0.5 females per straw at earing. Economic damage by L. denticornis alone was estimated to be 20% of the total number of experiments for all three crops but economic damage for the three pests together was estimated at 40% of the total number of experiments.     

Temperature responses of membrane-associated activities from spring and winter oats

Abstract Two-week old, glasshouse-grown seedlings of spring and winter oats (Avena sativa cv. Margam and Pennal respectively) were transferred to growth rooms where the daylength was 8 h and the temperature was either 20° or 5°C. Leaves from the 20°C treatment were harvested 1 week after transfer and those from the 5°C treatment after 3 weeks. Measurements were made, at temperatures in the range 5–20°C, of the rate of senescence of excised leaf sections; the rate of in vivo tetrazolium (TTC) reduction; the NADH-MTT tetrazolium diaphorase (NMD) activity of a membrane preparation isolated by sucrose gradient centri-fugation; and Hill activity of isolated chloroplasts. Data from these experiments, either untransformed or plotted in accordance with the Arrhenius equation, were analysed by the method of maximum likelihood for the occurrence of rate-temperature discontinuities. Distinct breakpoints at 14.2–16.3°C were detected for senescence, TTC reduction and NMD in winter oat leaves from the 20°C treatment, but spring oats grown at the same temperature gave a significant discontinuity only in the rate of senescent yellowing. After the hardening treatment, 3 weeks at 5°C, senescence and TTC reduction in winter oats exhibited breakpoints at 10.1–12.4°C and spring oats gave breaks at 11.8–17.3°C. No breakpoint was observed for Hill activity from either variety under either temperature treatment. The use of this approach in studies of growth at chilling temperatures and its potential as a screening method are discussed.     

The interrelationship of growth and frost tolerance in winter rye

The reduction in growth of winter cereals that occurs in the fall is thought to be required for the development of frost resistance. In the present study, the interrelationship of freezing tolerance and growth was examined by raising winter rye ( Secale cereale cv. Puma) plants at 20/16°C (day/night) and at 5/3°C under 8-, 16- and 24-h daylengths to vary growth rates and frost tolerance. Temperature and irradiance were quantified as thermal time, photothermal time and photosynthetic photon flux and examined by multiple linear regression in order to determine their effects on growth and frost tolerance of rye shoots. At low temperature, both growth and frost tolerance were markedly influenced by daylength and irradiance. Plants grown at 5/3°C with a short daylength accumulated shoot dry weight and increased frost tolerance at a greater rate per unit photothermal time or photon flux than plants grown at longer daylengths. Moreover, 5/3°C plants grown with a 16-h day grew more slowly and were less frost tolerant than plants grown with a 24-h day. We conclude that the interrelationship between growth and frost tolerance is a quantitative one. Frost tolerance is induced only by low temperature, but the development of forst tolerance is dependent upon both irradiance, which affects the amount of photoassimilate available, and daylength, which may affect the partitioning of photoassimilates between growth and frost tolerance.     

Tests for resistance to white clover mosaic virus in red and white clover

A range of red and white clover cultivars was tested for immunity to white clover mosaic virus. All plants became infected although some showed no symptoms. Enzyme-linked immunosorbent assay (ELISA) and immunosorbent electron microscopy (ISEM) revealed significant differences in virus concentration between red clover cultivars and between clones of white clover artificially infected with the virus. These differences could not, however, be related to relative yield losses.     

Microbial changes in clover rhizosphere after foliar and soil application of cobalt

Application of cobalt(II) nitrate to the leaves of red clover (Trifolium pratense L.) resulted in a pronounced increase of dry weight and the number of root nodules. Counts of bacteria in the rhizosphere, content of ammonia and production of carbon dioxide m rhizosphere soil were also higher, whereas the content of nitrates decreased Differences m the counts of bacteria, aotmomycetes, Azotobaoter, anaerobic bacteria and cellulose decomposing bacteria m the rhizosphere of control and treated plants were not directly related to the way of application of cobalt. GeneraPenicillium, Fusarium andTrichoderma predominated among fungi. The relative occurrence of pemcillia was higher after the application of cobalt, the incidence of fusaria was lower. The effects of foliar and soil application of cobalt on rhizosphere microflora were not identical.     

Insecticidal effect of NeemAzal against three stored-product beetle species on rye and oats

The insecticidal effect of the azadirachtin-based insecticide, NeemAzal, was examined against adults of Rhyzopertha dominica (F.), Sitophilus oryzae (L.), and Tribolium confusum Jacquelin du Val in rye, whole oats, and peeled oats. The insecticide was applied at three dose rates, which were equivalent to 50, 100, and 200 ppm of azadirachtin A. Adults of the above-mentioned species were exposed to the treated grains at 25 degrees C and 65% RH, and mortality was assessed after 24 h, 48 h, 7 d, and 14 d of exposure. Then, all adults were removed, and the treated substrate remained at the same conditions for an additional 45 d. After this interval, the grains were checked for progeny production. In all species and commodities tested, mortality increased with the increase of dose and exposure interval, except for T. confusum on whole and peeled oats. For R. dominica, NeemAzal was more effective on oats than on rye and peeled oats. In contrast, at rates > or = 100 ppm, azadirachtin was equally effective against S. oryzae on whole rye and oats, where mortality was 100% after 7 and 14 d of exposure, respectively. NeemAzal was not very effective against T. confusum where adult mortality was low, even after 14 d of exposure at the highest rate. For all species, significantly less progeny were recorded in the treated grains than in the untreated grains, with the exception of T. confusum on oats where offspring was significantly reduced only at the highest rate.     

Abundance, diversity, and activity of ammonia-oxidizing prokaryotes in the coastal Arctic ocean in summer and winter

Ammonia oxidation, the first step in nitrification, is performed by certain Beta- and Gammaproteobacteria and Crenarchaea to generate metabolic energy. Ammonia monooxygenase (amoA) genes from both Bacteria and Crenarchaea have been found in a variety of marine ecosystems, but the relative importance of Bacteria versus Crenarchaea in ammonia oxidation is unresolved, and seasonal comparisons are rare. In this study, we compared the abundance of betaproteobacterial and crenarchaeal amoA genes in the coastal Arctic Ocean during summer and winter over 2 years. Summer and winter betaproteobacterial amoA clone libraries were significantly different, although the gene sequences were similar to those found in temperate and polar environments. Betaproteobacterial and crenarchaeal amoA genes were 30- to 115-fold more abundant during the winter than during the summer in both years of the study. Archaeal amoA genes were more abundant than betaproteobacterial amoA genes in the first year, but betaproteobacterial amoA was more abundant than archaeal amoA the following year. The ratio of archaeal amoA gene copies to marine group I crenarchaeal 16S rRNA genes averaged 2.9 over both seasons and years, suggesting that ammonia oxidation was common in Crenarchaea at this location. Potential nitrification rates, as well as the total amoA gene abundance, were highest in the winter when competition with phytoplankton was minimal and ammonium concentrations were the highest. These results suggest that ammonium concentrations were important in determining the rates of ammonia oxidation and the abundance of ammonia-oxidizing Betaproteobacteria and Crenarchaea.     

Fungal communities and health status of roots of winter wheat cultivated after oats and oats mixed with other crops

Health status of winter wheat roots and thecomposition of wheat root fungi were studiedover 1996-1999 following the cultivation ofoats in a pure stand and mixed with otherplants as forecrops. The infection of wheatroots by >Gaeumannomyces graminis wasobserved to be largely dependent on the kind offorecrop; the best being oats in a pure stand,and then oats with pea or lupin mixtures. Inthe emergence and shooting phases, saprophyticfungi were dominant, while in the stage of harddough stage mainly pathogenic fungi, especially>G. graminis were common. The pathogenicfungi were mostly represented by >G.graminis and >Fusarium spp., while >Rhizoctonia spp. were much less frequent.The composition of the fungal communitydepended considerably on the forecrop anddevelopment phase of the plant. The kind offorecrop significantly affected the frequencyof infection by >G. graminis. The highestnumber of isolates was obtained from wheat rootsof crops grown after a mixture of oats andbarley.     

Nitrous oxide emissions from red clover and winter wheat residues depend on interacting effects of distribution,soil N availability and moisture level

Plant and Soil - The effects of residue type and distribution, soil moisture and NO3? availability were investigated in 43 days laboratory incubations (15 °C) on...