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1.
One of the major factors associated with global change is the ever-increasing concentration of atmospheric CO2. Although the stimulating effects of elevated CO2 (eCO2) on plant growth and primary productivity have been established, its impacts on the diversity and function of soil microbial communities are poorly understood. In this study, phylogenetic microarrays (PhyloChip) were used to comprehensively survey the richness, composition and structure of soil microbial communities in a grassland experiment subjected to two CO2 conditions (ambient, 368 p.p.m., versus elevated, 560 p.p.m.) for 10 years. The richness based on the detected number of operational taxonomic units (OTUs) significantly decreased under eCO2. PhyloChip detected 2269 OTUs derived from 45 phyla (including two from Archaea), 55 classes, 99 orders, 164 families and 190 subfamilies. Also, the signal intensity of five phyla (Crenarchaeota, Chloroflexi, OP10, OP9/JS1, Verrucomicrobia) significantly decreased at eCO2, and such significant effects of eCO2 on microbial composition were also observed at the class or lower taxonomic levels for most abundant phyla, such as Proteobacteria, Firmicutes, Actinobacteria, Bacteroidetes and Acidobacteria, suggesting a shift in microbial community composition at eCO2. Additionally, statistical analyses showed that the overall taxonomic structure of soil microbial communities was altered at eCO2. Mantel tests indicated that such changes in species richness, composition and structure of soil microbial communities were closely correlated with soil and plant properties. This study provides insights into our understanding of shifts in the richness, composition and structure of soil microbial communities under eCO2 and environmental factors shaping the microbial community structure.  相似文献   

2.
The concentrations of atmospheric carbon dioxide (CO2) and tropospheric ozone (O3) have been rising due to human activities. However, little is known about how such increases influence soil microbial communities. We hypothesized that elevated CO2 (eCO2) and elevated O3 (eO3) would significantly affect the functional composition, structure and metabolic potential of soil microbial communities, and that various functional groups would respond to such atmospheric changes differentially. To test these hypotheses, we analyzed 96 soil samples from a soybean free-air CO2 enrichment (SoyFACE) experimental site using a comprehensive functional gene microarray (GeoChip 3.0). The results showed the overall functional composition and structure of soil microbial communities shifted under eCO2, eO3 or eCO2+eO3. Key functional genes involved in carbon fixation and degradation, nitrogen fixation, denitrification and methane metabolism were stimulated under eCO2, whereas those involved in N fixation, denitrification and N mineralization were suppressed under eO3, resulting in the fact that the abundance of some eO3-supressed genes was promoted to ambient, or eCO2-induced levels by the interaction of eCO2+eO3. Such effects appeared distinct for each treatment and significantly correlated with soil properties and soybean yield. Overall, our analysis suggests possible mechanisms of microbial responses to global atmospheric change factors through the stimulation of C and N cycling by eCO2, the inhibition of N functional processes by eO3 and the interaction by eCO2 and eO3. This study provides new insights into our understanding of microbial functional processes in response to global atmospheric change in soybean agro-ecosystems.  相似文献   

3.
Soil microbial communities may be able to rapidly respond to changing environments in ways that change community structure and functioning, which could affect climate–carbon feedbacks. However, detecting microbial feedbacks to elevated CO2 (eCO2) or warming is hampered by concurrent changes in substrate availability and plant responses. Whether microbial communities can persistently feed back to climate change is still unknown. We overcame this problem by collecting microbial inocula at subfreezing conditions under eCO2 and warming treatments in a semi‐arid grassland field experiment. The inoculant was incubated in a sterilised soil medium at constant conditions for 30 days. Microbes from eCO2 exhibited an increased ability to decompose soil organic matter (SOM) compared with those from ambient CO2 plots, and microbes from warmed plots exhibited increased thermal sensitivity for respiration. Microbes from the combined eCO2 and warming plots had consistently enhanced microbial decomposition activity and thermal sensitivity. These persistent positive feedbacks of soil microbial communities to eCO2 and warming may therefore stimulate soil C loss.  相似文献   

4.

Key message

The CO 2 effect on the root production of a broad-leaved community was insignificant when grown in brown forest soil, however, it was positively large when grown in volcanic ash soil.

Abstract

We evaluated the root response to elevated CO2 fumigation of 3 birches (Betula sp.) and 1 deciduous oak (Quercus sp.) grown in immature volcanic ash soil (VA) or brown forest soil (BF). VA is a nutrient-poor, phosphorus-impoverished soil, broadly distributed in northern Japan. Each species had been exposed to either ambient (375–395 μmol mol?1) (aCO2) or elevated (500 μmol mol?1) (eCO2) CO2 during the daytime (more than 70 μmol m?2 s?1) over 4 growing seasons. The results suggest that eCO2 did not cause an increase in total root production when the community had grown in fertile BF soil, however, it did cause a large increase when the community was grown in infertile VA soil. Yet, carbon allocation to plant roots was not affected by eCO2 in either the BF or VA soils. Rhizo-morphogenesis appeared to occur to a greater extent under eCO2. It seems that the saplings developed a massive amount of fine roots under the VA and eCO2 conditions. Unexpectedly, eCO2 resulted in a larger total root mass when the community was grown in VA soil than when grown in BF soil (eCO2 × VA vs. eCO2 × BF). These results may hint to a site-specific potential of communities to sequester future atmospheric carbon. The growing substance of plants is an important factor which root response to eCO2 depends on, however, further studies are needed for a better understanding.
  相似文献   

5.
6.
Fungal communities play a major role as decomposers in the Earth''s ecosystems. Their community-level responses to elevated CO2 (eCO2), one of the major global change factors impacting ecosystems, are not well understood. Using 28S rRNA gene amplicon sequencing and co-occurrence ecological network approaches, we analyzed the response of soil fungal communities in the BioCON (biodiversity, CO2, and N deposition) experimental site in Minnesota, USA, in which a grassland ecosystem has been exposed to eCO2 for 12 years. Long-term eCO2 did not significantly change the overall fungal community structure and species richness, but significantly increased community evenness and diversity. The relative abundances of 119 operational taxonomic units (OTU; ∼27% of the total captured sequences) were changed significantly. Significantly changed OTU under eCO2 were associated with decreased overall relative abundance of Ascomycota, but increased relative abundance of Basidiomycota. Co-occurrence ecological network analysis indicated that eCO2 increased fungal community network complexity, as evidenced by higher intermodular and intramodular connectivity and shorter geodesic distance. In contrast, decreased connections for dominant fungal species were observed in the eCO2 network. Community reassembly of unrelated fungal species into highly connected dense modules was observed. Such changes in the co-occurrence network topology were significantly associated with altered soil and plant properties under eCO2, especially with increased plant biomass and NH4+ availability. This study provided novel insights into how eCO2 shapes soil fungal communities in grassland ecosystems.  相似文献   

7.
Elevated atmospheric CO2 (eCO2) generally increases carbon input in rice paddy soils and stimulates the growth of methane‐producing microorganisms. Therefore, eCO2 is widely expected to increase methane (CH4) emissions from rice agriculture, a major source of anthropogenic CH4. Agricultural practices strongly affect CH4 emissions from rice paddies as well, but whether these practices modulate effects of eCO2 is unclear. Here we show, by combining a series of experiments and meta‐analyses, that whereas eCO2 strongly increased CH4 emissions from paddies without straw incorporation, it tended to reduce CH4 emissions from paddy soils with straw incorporation. Our experiments also identified the microbial processes underlying these results: eCO2 increased methane‐consuming microorganisms more strongly in soils with straw incorporation than in soils without straw, with the opposite pattern for methane‐producing microorganisms. Accounting for the interaction between CO2 and straw management, we estimate that eCO2 increases global CH4 emissions from rice paddies by 3.7%, an order of magnitude lower than previous estimates. Our results suggest that the effect of eCO2 on CH4 emissions from rice paddies is smaller than previously thought and underline the need for judicious agricultural management to curb future CH4 emissions.  相似文献   

8.
Although elevated CO2 (eCO2) significantly affects the α‐diversity, composition, function, interaction and dynamics of soil microbial communities at the local scale, little is known about eCO2 impacts on the geographic distribution of micro‐organisms regionally or globally. Here, we examined the β‐diversity of 110 soil microbial communities across six free air CO2 enrichment (FACE) experimental sites using a high‐throughput functional gene array. The β‐diversity of soil microbial communities was significantly (P < 0.05) correlated with geographic distance under both CO2 conditions, but declined significantly (P < 0.05) faster at eCO2 with a slope of ?0.0250 than at ambient CO2 (aCO2) with a slope of ?0.0231 although it varied within each individual site, indicating that the spatial turnover rate of soil microbial communities was accelerated under eCO2 at a larger geographic scale (e.g. regionally). Both distance and soil properties significantly (P < 0.05) contributed to the observed microbial β‐diversity. This study provides new hypotheses for further understanding their assembly mechanisms that may be especially important as global CO2 continues to increase.  相似文献   

9.
Despite knowledge of the interaction between climate change factors significant uncertainty exists concerning the individual and interactive effects of elevated carbon dioxide (eCO2) and elevated temperature (eT) on the soil microbiome and function. Here we examine the individual and interactive effects of eCO2 and eT on tree growth, soil respiration (Rsoil), biomass, structural and functional composition of microbial community, nitrogen (N) mineralisation and N availability in a whole tree chamber experiment. Eucalyptus globulus plants were grown from seedling to ca. 10 m tall for 15 months in a nutrient-poor sandy soil under ambient and elevated (+ 240 ppm) atmospheric CO2 concentrations combined with ambient or elevated temperatures (+ 3 °C) in a full factorial design. Plant growth was strongly stimulated under eCO2, but eT had little impact on any measured plant property. In contrast, Rsoil was not consistently affected by eCO2 or eT, but correlated strongly with root and leaf biomass. The response of N-mineralisation and nutrient availability to eCO2 and eT varied across time, and available N correlated strongly with plant height. Further, the C:N ratio of the microbial biomass and leaves were both higher under eCeT treatment. However, these functional measures were not significantly linked to either structural or functional diversity of the soil microbiome. Taken together, these results suggest that in this low-nutrient soil, belowground processes are principally driven by aboveground productivity. Our work provides novel insight into mechanisms underlying above- and belowground response to climate change, and the potential to sequester C in a low-nutrient status soil under future climatic conditions may be limited .  相似文献   

10.
Free‐air CO2 enrichment (FACE) experiments have demonstrated increased plant productivity in response to elevated (e)CO2, with the magnitude of responses related to soil nutrient status. Whilst understanding nutrient constraints on productivity responses to eCO2 is crucial for predicting carbon uptake and storage, very little is known about how eCO2 affects nutrient cycling in phosphorus (P)‐limited ecosystems. Our study investigates eCO2 effects on soil N and P dynamics at the EucFACE experiment in Western Sydney over an 18‐month period. Three ambient and three eCO2 (+150 ppm) FACE rings were installed in a P‐limited, mature Cumberland Plain Eucalyptus woodland. Levels of plant accessible nutrients, evaluated using ion exchange resins, were increased under eCO2, compared to ambient, for nitrate (+93%), ammonium (+12%) and phosphate (+54%). There was a strong seasonality to responses, particularly for phosphate, resulting in a relatively greater stimulation in available P, compared to N, under eCO2 in spring and summer. eCO2 was also associated with faster nutrient turnover rates in the first six months of the experiment, with higher N (+175%) and P (+211%) mineralization rates compared to ambient rings, although this difference did not persist. Seasonally dependant effects of eCO2 were seen for concentrations of dissolved organic carbon in soil solution (+31%), and there was also a reduction in bulk soil pH (‐0.18 units) observed under eCO2. These results demonstrate that CO2 fertilization increases nutrient availability – particularly for phosphate – in P‐limited soils, likely via increased plant belowground investment in labile carbon and associated enhancement of microbial turnover of organic matter and mobilization of chemically bound P. Early evidence suggests that there is the potential for the observed increases in P availability to support increased ecosystem C‐accumulation under future predicted CO2 concentrations.  相似文献   

11.
12.

Aims

The efficient management of phosphorus (P) in cropping systems remains a challenge due to climate change. We tested how plant species access P pools in soils of varying P status (Olsen-P 3.2–17.6 mg?kg?1), under elevated atmosphere CO2 (eCO2).

Methods

Chickpea (Cicer arietinum L.) and wheat (Triticum aestivum L.) plants were grown in rhizo-boxes containing Vertosol or Calcarosol soil, with two contrasting P fertilizer histories for each soil, and exposed to ambient (380 ppm) or eCO2 (700 ppm) for 6 weeks.

Results

The NaHCO3-extractable inorganic P (Pi) in the rhizosphere was depleted by both wheat and chickpea in all soils, but was not significantly affected by CO2 treatment. However, NaHCO3-extractable organic P (Po) accumulated, especially under eCO2 in soils with high P status. The NaOH-extractable Po under eCO2 accumulated only in the Vertosol with high P status. Crop species did not exhibit different eCO2-triggered capabilities to access any P pool in either soil, though wheat depleted NaHCO3-Pi and NaOH-Pi in the rhizosphere more than chickpea. Elevated CO2 increased microbial biomass C in the rhizosphere by an average of 21 %. Moreover, the size in Po fractions correlated with microbial C but not with rhizosphere pH or phosphatase activity.

Conclusion

Elevated CO2 increased microbial biomass in the rhizosphere which in turn temporally immobilized P. This P immobilization was greater in soils with high than low P availability.  相似文献   

13.
To quantify stem respiration (RS) under elevated CO2 (eCO2), stem CO2 efflux (EA) and CO2 flux through the xylem (FT) should be accounted for, because part of respired CO2 is transported upwards with the sap solution. However, previous studies have used EA as a proxy of RS, which could lead to equivocal conclusions. Here, to test the effect of eCO2 on RS, both EA and FT were measured in a free‐air CO2 enrichment experiment located in a mature Eucalyptus native forest. Drought stress substantially reduced EA and RS, which were unaffected by eCO2, likely as a consequence of its neutral effect on stem growth in this phosphorus‐limited site. However, xylem CO2 concentration measured near the stem base was higher under eCO2, and decreased along the stem resulting in a negative contribution of FT to RS, whereas the contribution of FT to RS under ambient CO2 was positive. Negative FT indicates net efflux of CO2 respired below the monitored stem segment, likely coming from the roots. Our results highlight the role of nutrient availability on the dependency of RS on eCO2 and suggest stimulated root respiration under eCO2 that may shift vertical gradients in xylem [CO2] confounding the interpretation of EA measurements.  相似文献   

14.
Elevated CO2 stimulates plant growth and affects quantity and composition of root exudates, followed by response of its microbiome. Three scenarios representing nitrate fertilization regimes: limited (30 ppm), moderate (70 ppm) and excess nitrate (100 ppm) were compared under ambient and elevated CO2 (eCO2, 850 ppm) to elucidate their combined effects on root-surface-associated bacterial community abundance, structure and function. Wheat root-surface-associated microbiome structure and function, as well as soil and plant properties, were highly influenced by interactions between CO2 and nitrate levels. Relative abundance of total bacteria per plant increased at eCO2 under excess nitrate. Elevated CO2 significantly influenced the abundance of genes encoding enzymes, transporters and secretion systems. Proteobacteria, the largest taxonomic group in wheat roots (~ 75%), is the most influenced group by eCO2 under all nitrate levels. Rhizobiales, Burkholderiales and Pseudomonadales are responsible for most of these functional changes. A correlation was observed among the five gene-groups whose abundance was significantly changed (secretion systems, particularly type VI secretion system, biofilm formation, pyruvate, fructose and mannose metabolism). These changes in bacterial abundance and gene functions may be the result of alteration in root exudation at eCO2, leading to changes in bacteria colonization patterns and influencing their fitness and proliferation.Subject terms: Microbiome, Microbial ecology, Metagenomics, Microbial ecology  相似文献   

15.
Projections of future climate are highly sensitive to uncertainties regarding carbon (C) uptake and storage by terrestrial ecosystems. The Eucalyptus Free‐Air CO2 Enrichment (EucFACE) experiment was established to study the effects of elevated atmospheric CO2 concentrations (eCO2) on a native mature eucalypt woodland with low fertility soils in southeast Australia. In contrast to other FACE experiments, the concentration of CO2 at EucFACE was increased gradually in steps above ambient (+0, 30, 60, 90, 120, and 150 ppm CO2 above ambient of ~400 ppm), with each step lasting approximately 5 weeks. This provided a unique opportunity to study the short‐term (weeks to months) response of C cycle flux components to eCO2 across a range of CO2 concentrations in an intact ecosystem. Soil CO2 efflux (i.e., soil respiration or Rsoil) increased in response to initial enrichment (e.g., +30 and +60 ppm CO2) but did not continue to increase as the CO2 enrichment was stepped up to higher concentrations. Light‐saturated photosynthesis of canopy leaves (Asat) also showed similar stimulation by elevated CO2 at +60 ppm as at +150 ppm CO2. The lack of significant effects of eCO2 on soil moisture, microbial biomass, or activity suggests that the increase in Rsoil likely reflected increased root and rhizosphere respiration rather than increased microbial decomposition of soil organic matter. This rapid increase in Rsoil suggests that under eCO2, additional photosynthate was produced, transported belowground, and respired. The consequences of this increased belowground activity and whether it is sustained through time in mature ecosystems under eCO2 are a priority for future research.  相似文献   

16.
Global climate models predict that the frequency and intensity of precipitation events will increase in many regions across the world. However, the biosphere-climate feedback to elevated precipitation (eP) remains elusive. Here, we report a study on one of the longest field experiments assessing the effects of eP, alone or in combination with other climate change drivers such as elevated CO2 (eCO2), warming and nitrogen deposition. Soil total carbon (C) decreased after a decade of eP treatment, while plant root production decreased after 2 years. To explain this asynchrony, we found that the relative abundances of fungal genes associated with chitin and protein degradation increased and were positively correlated with bacteriophage genes, suggesting a potential viral shunt in C degradation. In addition, eP increased the relative abundances of microbial stress tolerance genes, which are essential for coping with environmental stressors. Microbial responses to eP were phylogenetically conserved. The effects of eP on soil total C, root production, and microbes were interactively affected by eCO2. Collectively, we demonstrate that long-term eP induces soil C loss, owing to changes in microbial community composition, functional traits, root production, and soil moisture. Our study unveils an important, previously unknown biosphere-climate feedback in Mediterranean-type water-limited ecosystems, namely how eP induces soil C loss via microbe-plant–soil interplay.  相似文献   

17.
Global climate change, such as elevated atmospheric carbon dioxide (eCO2), may accelerate the breakdown of crop resistance to insect pests by compromising expression of resistance genes. This study investigated how eCO2 (700 μmol/mol) affected the susceptibility of red raspberry (Rubus idaeus) to the European large raspberry aphid (Amphorophora idaei) Börner (Homoptera: Aphididae), using a susceptible cultivar (Malling Jewel) and cultivars containing either the A1 (Glen Lyon) or A10 (Glen Rosa) resistance genes. Compared to plants grown at ambient CO2 (aCO2) (375 μmol/mol), growth rates were significantly increased (ranging from 42–300%) in all cultivars at eCO2. There was some evidence that plants containing the A1 gene were more susceptible to aphids at eCO2, with aphid populations doubling in size compared to the same plants grown at aCO2. Moreover, aphids grew 38% larger (1.36 mg compared with 0.98 mg) on plants with the A1 resistance gene at eCO2 compared with those at aCO2. Aphid performance on plants containing the A1 gene grown at eCO2 was therefore similar to that of aphids reared on entirely susceptible plants under either CO2 treatment. In contrast, aphids did not respond to eCO2 when reared on plants with the A10 resistance gene, suggesting that plants with this resistance gene remained resistant to aphids at eCO2.  相似文献   

18.
Background and Aims Benefits to crop productivity arising from increasing CO2 fertilization may be offset by detrimental effects of global climate change, such as an increasing frequency of drought. Phosphorus (P) nutrition plays an important role in crop responses to water stress, but how elevated CO2 (eCO2) and P nutrition interact, especially in legumes, is unclear. This study aimed to elucidate whether P supply improves plant drought tolerance under eCO2.Methods A soil-column experiment was conducted in a free air CO2 enrichment (SoilFACE) system. Field pea (Pisum sativum) was grown in a P-deficient vertisol, supplied with 15 mg P kg−1 (deficient) or 60 mg P kg−1 (adequate for crop growth) and exposed to ambient CO2 (aCO2; 380–400 ppm) or eCO2 (550–580 ppm). Drought treatments commenced at flowering. Measurements were taken of soil and leaf water content, photosynthesis, stomatal conductance, total soluble sugars and inorganic P content (Pi).Key Results Water-use efficiency was greatest under eCO2 when the plants were supplied with adequate P compared with other treatments irrespective of drought treatment. Elevated CO2 decreased stomatal conductance and transpiration rate, and increased the concentration of soluble sugars and relative water contents in leaves. Adequate P supply increased concentrations of soluble sugars and Pi in drought-stressed plants. Adequate P supply but not eCO2 increased root length distribution in deeper soil layers.Conclusions Phosphorus application and eCO2 interactively enhanced periodic drought tolerance in field pea as a result of decreased stomatal conductance, deeper rooting and high Pi availability for carbon assimilation in leaves.  相似文献   

19.
The level of carbon dioxide (CO2) in the air can affect several traits in plants. Elevated atmospheric CO2 (eCO2) can enhance photosynthesis and increase plant productivity, including biomass, although there are inconsistencies regarding the effects of eCO2 on the plant growth response. The compounding effects of ambient environmental conditions such as light intensity, photoperiod, water availability, and soil nutrient composition can affect the extent to which eCO2 enhances plant productivity. This study aimed to investigate the growth response of Arabidopsis thaliana to eCO2 (800 ppm) under short photoperiod (8/16 h, light/dark cycle). Here, we report an attenuated fertilization effect of eCO2 on the shoot biomass of Arabidopsis plants grown under short photoperiod. The biomass of two-, three-, and four-week-old Arabidopsis plants was increased by 10%, 15%, and 28%, respectively, under eCO2 compared to the ambient CO2 (aCO2, 400 ppm) i.e. control. However, the number of rosette leaves, rosette area, and shoot biomass were similar in mature plants under both CO2 conditions, despite 40% higher photosynthesis in eCO2 exposed plants. The levels of chlorophylls and carotenoids were similar in the fully expanded rosette leaves regardless of the level of CO2. In conclusion, CO2 enrichment moderately increased Arabidopsis shoot biomass at the juvenile stage, whereas the eCO2-induced increment in shoot biomass was not apparent in mature plants. A shorter day-length can limit the source-to-sink resource allocation in a plant in age-dependent manner, hence diminishing the eCO2 fertilization effect on the shoot biomass in Arabidopsis plants grown under short photoperiod.  相似文献   

20.
Regenerating forests influence the global carbon (C) cycle, and understanding how climate change will affect patterns of regeneration and C storage is necessary to predict the rate of atmospheric carbon dioxide (CO2) increase in future decades. While experimental elevation of CO2 has revealed that young forests respond with increased productivity, there remains considerable uncertainty as to how the long‐term dynamics of forest regrowth are shaped by elevated CO2 (eCO2). Here, we use the mechanistic size‐ and age‐ structured Ecosystem Demography model to investigate the effects of CO2 enrichment on forest regeneration, using data from the Duke Forest Free‐Air Carbon dioxide Enrichment (FACE) experiment, a forest chronosequence, and an eddy‐covariance tower for model parameterization and evaluation. We find that the dynamics of forest regeneration are accelerated, and stands consistently hit a variety of developmental benchmarks earlier under eCO2. Because responses to eCO2 varied by plant functional type, successional pathways, and mature forest composition differed under eCO2, with mid‐ and late‐successional hardwood functional types experiencing greater increases in biomass compared to early‐successional functional types and the pine canopy. Over the simulation period, eCO2 led to an increase in total ecosystem C storage of 9.7 Mg C ha‐1. Model predictions of mature forest biomass and ecosystem–atmosphere exchange of CO2 and H2O were sensitive to assumptions about nitrogen limitation; both the magnitude and persistence of the ecosystem response to eCO2 were reduced under N limitation. In summary, our simulations demonstrate that eCO2 can result in a general acceleration of forest regeneration while altering the course of successional change and having a lasting impact on forest ecosystems.  相似文献   

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