Vertical and Seasonal Dynamics of Planktonic Ciliates in a Strongly Stratified Hypertrophic Lake

Seasonal population dynamics and the vertical distribution of planktonic ciliates in a hypertrophic and strongly stratified temperate lake were studied from April to October in 2000 and from April to June in 2001. In the epi- and metalimnion the ciliate abundance peaked in spring and late summer, reaching maximum values in the metalimnion (86 cells ml⁻¹) on 7th August 2000. In the epilimnion, the highest biomass content (414 μg C l⁻¹) was observed on 8th May 2000. In the hypolimnion only a late summer peak occurred and the ciliate numbers were always lower than in the epi- and metalimnion. Five groups dominated the community of ciliates: Oligotrichida, Gymnostomatea, Prostomatida, Hymenostomata and Peritrichia, and the community composition varied greatly with depth. In the epilimnion the ciliate numbers were dominated by oligotrichs but small algivorous prostomatids, peritrichs and gymnostomes were also numerous. In the metalimnion these groups were gradually replaced by scuticociliates and mixotrophic Coleps spp. In the hypolimnion scuticociliates and species known as benthic migrants dominated. In the epilimnion and upper metalimnion in spring large herbivores and in summer small bacterivores were more numerous.     

Bacterial Diversity and Distribution in the Holocene Sediments of a Northern Temperate Lake

Sediments contain an abundance of microorganisms. However, the diversity and distribution of microorganisms associated with sediments are poorly understood, particularly in lacustrine environments. We used banding patterns from denaturing gradient gel electrophoresis (DGGE) and 16S rDNA sequences to assess the structure of bacterial communities in the Holocene sediments of a meromictic lake in Minnesota. Cluster analysis of the DGGE banding patterns indicates that the early- and middle-Holocene samples group separately from the late-Holocene samples. About 79% of the recovered bacterial sequences cluster with the α-, β-, δ-, ɛ-, and γ- Proteobacteriaceae and Firmicutes. The remaining ∼21% lack cultured representatives. The taxonomic lineages of bacteria differ statistically among the early-, middle-, and late-Holocene samples, although the difference is smallest between early- and middle-Holocene samples. Early- and middle-Holocene samples are dominated by ɛ-Proteobacteriaceae, and late-Holocene samples are dominated by sequences from uncultured subphyla. We only recovered δ-Proteobacteriaceae in late-Holocene sediments and α- and γ- Proteobacteriaceae in late- and middle-Holocene sediments. Diversity estimates derived from early-, middle-, and late-Holocene clone libraries indicate that the youngest (late-Holocene) samples had significantly greater bacterial diversity than the oldest (early-Holocene) samples, and the middle-Holocene samples contained intermediate levels of diversity. The observed patterns of diversity may be caused by increased bacterial niche-partitioning in younger sediments that contain a greater abundance of labile organic matter than older sediments. D. M. Nelson and S. Ohene-Adjei contributed equally to this work     

Seasonal and Episodic Lake Mixing Stimulate Differential Planktonic Bacterial Dynamics

Yuan Yang Lake (YYL), Taiwan, experiences both winter and typhoon-initiated mixing, and each type of mixing event is characterized by contrasting environmental conditions. Previous work suggested that after typhoon mixing, bacterial communities in YYL reset to a pioneer composition and then follow a predictable trajectory of change until the next typhoon. Our goal was to continue this investigation by observing bacterial community change after a range of mixing intensities, including seasonal winter mixing. We fingerprinted aquatic bacterial communities in the epilimnion and hypolimnion using automated ribosomal intergenic spacer analysis and then assessed community response using multivariate statistics. We found a significant linear relationship between water column stability and the epilimnion to hypolimnion divergences. In comparison to the summer, we found the winter community had a distinct composition and less variation. We divided the bacterial community into population subsets according to abundance (rare, common, or dominant) and occurrence (transient or persistent) and further explored the contribution of these subsets to the overall community patterns. We found that transient taxa did not drive bacterial community patterns following weak typhoon mixing events, but contributed substantially to patterns observed following strong events. Common taxa generally did not follow the community trajectory after weak or strong events. Our results suggest intensity, frequency, and seasonality jointly contribute to aquatic bacterial response to mixing disturbance.     

Seasonal Dynamics of Dimethylarsenic Acid Degrading Bacteria Dominated in Lake Kibagata

Degradation processes of organoarsenic compounds significantly influence arsenic cycles in aquatic environments and would depend on the bacterial activities. The bacterial population involving dimethylarsinic acid (DMAA) degradation was investigated in Lake Kibagata from April to December in 2003. During the experimental period, the methylated arsenic was not detected, although the inorganic arsenic concentration ranged from 3.4 nM to 9.2 nM. Moreover, in the sample water of Lake Kibagata to which DMAA added, DMAA decreased while inorganic arsenic increased for 25 days. These facts suggested that the bacteria remineralized methylate arsenic species to inorganic arsenic. In fact, monitoring the use of Most Probable Number (MPN) procedure demonstrated that the DMAA-degrading bacteria exist at cell densities ranged from 41 cells/ml to 510 cells/ml. To determine the composition of DMAA-degrading bacteria, the total 110 isolates obtained as dominated bacterial species were analyzed by the restriction-fragment-length polymorphism (RFLP) analysis of 16S rDNA. As a result, total 110 isolates were classified into 12 types, of which 4 types dominated during the spring and/or fall seasons, and the rest 8 types dominated during summer season. DMAA degrading activities of the 110 isolates ranged at various degrees. Especially, the some isolates of fall season tend to show high degradation activities. The phylogenetic analysis using 16S rDNA revealed that the representative isolates formed several clusters in the gram-positive bacterial group and the proteobacteria subdivision. The diverse compositions of DMAA-degrading bacteria would seasonally change to control the rates of organoarsenic degradation in Kibagata.     

Testing the Sensitivity of Phytoplankton Communities to Changes in Water Temperature and Nutrient Load, in a Temperate Lake

Freshwater lakes are biologically sensitive to changes in the surrounding environment and the impacts that such changes have on their water quality are of considerable ecological, recreational and economic importance. In this study the phytoplankton community model, PROTECH, was used to experiment with the effects of elevated temperatures and increased nutrient load on phytoplankton succession and productivity. The response of a phytoplankton community to combined incremental changes in these drivers was analysed, in order to elucidate the resulting ecological changes. Annual mean phytoplankton biomass increased with increases in temperature and nutrient loading, although the latter had the larger effect. The phenology of the dominant phytoplankton taxa changed with increasing water temperature; the three spring blooming species all peaked earlier in the year. The simulated summer bloom of Anabaena became earlier in the year and the Chlorella bloom later. The increased phytoplankton biomass was largely dominated by the cyanobacterium Anabaena, which was especially prevalent during the summer bloom. This resulted in a progressive loss of phytoplankton biodiversity with increasing water temperature and nutrient supply. Model experimentation showed that whilst both factors greatly affected the community, the changes to nutrient loading generally had the greater effect and that at low nutrient levels the effect of water temperature change was reduced considerably. Finally, the model predicted that cyanobacteria have the potential to dominate the phytoplankton community, with clear consequences for water quality, and that this dominance was at its greatest when high water temperatures were combined with high nutrient loads.     

Primary Production of Phytoplankton in a Strongly Stratified Temperate Lake

Lake Verevi (12.6 ha, maximum depth 11.0 m, mean depth 3.6 m) is a strongly eutrophic and stratified lake. Planktothrix agardhii is the most characteristic phytoplankton species in summer and autumn, while photosynthesizing sulphur bacteria can occur massively in the metalimnion. Primary production (PP) and chlorophyll a concentration (Chl a) were seasonally studied in 1991, 1993, 2000, and 2001. Vertical distribution of PP was rather complex, having usually two peaks, one at or near the surface (0–1 m), and another deeper (at 3–7 m) in the metalimnion. The values of dark fixation of CO₂ in the metalimnion were in most cases higher than those in the upper water layer. Considering the average daily PP 896 mg C m⁻² and yearly PP 162 mg C m⁻², Secchi depth 2.34 m, and epilimnetic concentrations of chlorophyll a (19.6 mg m⁻³), total nitrogen and total phosphorus (TP, 52 mg m⁻³) in 2000, L. Verevi is a eutrophic lake of a ‘good’ status. Considering the total amounts of nutrients stored in the hypolimnion, the average potential concentrations in the whole water column could achieve 1885 mg m⁻³ of TN and 170 mg m⁻³ of TP reflecting hypertrophic conditions and a ‚bad’ status. Improvement of the epilimnetic water quality from the 1990s to the 2000s may have resulted from incomplete spring mixing and might not reflect the real improvement. A decreased nutrient concentration in the epilimnion has supported the establishment of a ‘clear epilimnion state’ allowing light to penetrate into the nutrient-rich metalimnion and sustaining a high production of cyanobacteria and phototrophic sulphur bacteria.     

The Seasonal Dynamics and Composition of Photosynthetic Picoplankton Communities in Temperate Lakes in Ontario,Canada

The seasonal abundance and composition of photosynthetic picoplankton (0.2-2 μm) was compared among five oligotrophic to mesotrophic lakes in Ontario. Epilimnetic picocyanobacteria abundance followed a similar pattern in all lakes; maximum abundance (2-4 × 10⁵ cells · ml⁻¹) occurred in late summer following a period of rapid, often exponential increase after epilimnetic temperatures reached 20 °C. In half of the lakes picocyanobacteria abundance was significantly correlated with temperature, while in other lakes the presence of a small spring peak resulted in a poor correlation with temperature. In all lakes there was a significant correlation between epilimnetic abundance and day of the year. Correlations with water chemistry parameters (soluble reactive phosphorus, total phosphorus, particulate C: P and C: N) were generally weaker or insignificant. However, in the three lakes with the highest spring nitrate concentrations, a significant negative correlation with nitrate was observed. During summer stratification, picocyanobacteria abundance reached a maximum within the metalimnion and at or above the euphotic zone (1% of incident light) in all lakes. These peaks were not related to nutrient gradients. The average total phytoplankton biomass ranged from 0.5 g m⁻³ (wet weight) in the most oligotrophic lake to 1.4 g m⁻³ for the most mesotrophic with picoplankton biomass ranging from 0.01 g m⁻³ to 0.3 g m⁻³. Picocyanobacteria biomass comprised 1 to 9 % of total phytoplankton biomass in late summer, but in one year for one lake represented a maximum of 56%. Other photosynthetic picoplankton (unidentified eukaryotes, Chlorella spp. Nannochloris spp.), although less abundant (10³ cells · ml⁻¹) than picocyanobacteria, represented biomass equal or greater than that of the picocyanobacteria in spring and early summer. On average, half of the photosynthetic picoplankton biomass was eukaryotic in the more coloured lakes, while in the clear lakes less than 20% was eukaryotic. Among the lakes there was a significant positive correlation between the average light extinction coefficient and the proportion of eukaryotic biomass of the picoplankton. In mesotrophic Jack's Lake, the contribution of picoplankton to the maximum photosynthetic rate ranged from 10 to 47% with the highest values in the spring (47%) and late summer (33%), as a result of eukaryotic picoplankton and picocyanobacteria respectively. Picocyanobacteria cell specific growth rates were high during July (0.6-0.8 day⁻¹) and losses were close to 80% of the growth rate. Thus, despite low biomass, photosynthetic picoplankton populations appeared to turn over rapidly and potentially contributed significantly to planktonic food webs in early spring and late summer.     

Quantitative Importance,Composition, and Seasonal Dynamics of Protozoan Communities in Polyhaline versus Freshwater Intertidal Sediments

The quantitative importance and composition of protozoan communities was investigated in sandy and silty intertidal sediments of a polyhaline and a freshwater site in the Schelde estuary. Total biomass of the protozoans studied, integrated over the upper 4 cm of the sediment, ranged from 41 to 597 mg C m^–2 and was in the same order of magnitude at the polyhaline and the freshwater intertidal site. Nanoheterotrophs were the dominant protozoans, in terms of both abundance and biomass. Ciliate abundances appeared to be largely determined by physical constraints, namely, the amount of interstitial space and hydrodynamic disturbances. It remains unclear which factors control nanoheterotrophic abundances and biomasses, which showed comparatively little seasonal and between-site fluctuations. Salinity differences were clearly reflected in the protozoan community composition. The dominant role of sessile ciliates is a unique feature of sediments in the freshwater tidal reaches, which can be attributed to the dynamic nature of sedimentation and resuspension processes associated with the maximum turbidity zone. Based on biomass ratios and estimated weight-specific metabolic rates, protozoa possibly accounted for ~29 to 96% of the estimated combined metabolic rate of protozoan and metazoan consumers at our sampling stations in late spring/early autumn. The contribution of protozoa to this combined metabolic rate was higher at the sandy than at the silty stations and was mainly accounted for by the nanoheterotrophs. These data emphasize the potential importance of small protozoa in sediments and suggest that protozoa are important components of benthic food webs.     

Fish and Phytoplankton Exhibit Contrasting Temporal Species Abundance Patterns in a Dynamic North Temperate Lake

Temporal patterns of species abundance, although less well-studied than spatial patterns, provide valuable insight to the processes governing community assembly. We compared temporal abundance distributions of two communities, phytoplankton and fish, in a north temperate lake. We used both 17 years of observed relative abundance data as well as resampled data from Monte Carlo simulations to account for the possible effects of non-detection of rare species. Similar to what has been found in other communities, phytoplankton and fish species that appeared more frequently were generally more abundant than rare species. However, neither community exhibited two distinct groups of “core” (common occurrence and high abundance) and “occasional” (rare occurrence and low abundance) species. Both observed and resampled data show that the phytoplankton community was dominated by occasional species appearing in only one year that exhibited large variation in their abundances, while the fish community was dominated by core species occurring in all 17 years at high abundances. We hypothesize that the life-history traits that enable phytoplankton to persist in highly dynamic environments may result in communities dominated by occasional species capable of reaching high abundances when conditions allow. Conversely, longer turnover times and broad environmental tolerances of fish may result in communities dominated by core species structured primarily by competitive interactions.     

Dynamics of Copepod Faecal Pellets in Relation to a Phaeocystis Dominated Phytoplankton Bloom: Characteristics, Production and Flux

Copepod faecal pellet characteristics and production were measuredin spring 1995, 1996 and 1997 in the North Sea Southern Bightin order to define changes due to the development of the phytoplanktonbloom. Changes were related to the succession from diatomsto a Phaeocystis sp. bloom. Mean monthly pellet productiondecreased during the Phaeocystis bloom development to 0.27 pelletsind. ^–1 h ^–1, approximately 80% lower than beforeand after the bloom. Although phytoplanktonic pigments showedsignificant differences between inshore and offshore stations,there was no such significant difference for faecal pellet production.Faecal pellet sinking-rate decreased from 100 to 70 m day ^–1during the transition from a diatom- to a Phaeocystis-dominatedbloom. This was due to a decrease in pellet density and/or adecrease of the pellet volume. These results supported the ideaof lower feeding of copepods under Phaeocystis bloom conditions.As mean seasonal density of copepod faecal pellets was higher(1.37 g cm ^–3) than in other seas, accidental ingestionof sedimentary material as the cause of this high density isdiscussed.     

Seasonal Dynamics of Periphyton in a Large Tropical Lake

Tropical aquatic systems are generally assumed to have little seasonality in productivity patterns. However, this study indicated that there was substantial seasonal variation in epilithic productivity and biomass in tropical Lake Tanganyika, due primarily to seasonal patterns in lake hydrodynamics that influence nutrient availability. Although they support much of the lake’s biological diversity, epilithic algae made a minor contribution to the total energy budget in Lake Tanganyika. A comparison among large, oligotrophic lakes revealed no significant latitudinal trends in periphyton productivity or biomass. However, Lake Tanganyika has relatively low benthic algal biomass and is therefore more efficient at photosynthesis than the temperate lakes. The influence of wave action and consumer density and diversity may be important in moderating productivity of the epilithic community.     

Host-Specificity and Dynamics in Bacterial Communities Associated with Bloom-Forming Freshwater Phytoplankton

Many freshwater phytoplankton species have the potential to form transient nuisance blooms that affect water quality and other aquatic biota. Heterotrophic bacteria can influence such blooms via nutrient regeneration but also via antagonism and other biotic interactions. We studied the composition of bacterial communities associated with three bloom-forming freshwater phytoplankton species, the diatom Aulacoseira granulata and the cyanobacteria Microcystis aeruginosa and Cylindrospermopsis raciborskii. Experimental cultures incubated with and without lake bacteria were sampled in three different growth phases and bacterial community composition was assessed by 454-Pyrosequencing of 16S rRNA gene amplicons. Betaproteobacteria were dominant in all cultures inoculated with lake bacteria, but decreased during the experiment. In contrast, Alphaproteobacteria, which made up the second most abundant class of bacteria, increased overall during the course of the experiment. Other bacterial classes responded in contrasting ways to the experimental incubations causing significantly different bacterial communities to develop in response to host phytoplankton species, growth phase and between attached and free-living fractions. Differences in bacterial community composition between cyanobacteria and diatom cultures were greater than between the two cyanobacteria. Despite the significance, major differences between phytoplankton cultures were in the proportion of the OTUs rather than in the absence or presence of specific taxa. Different phytoplankton species favoring different bacterial communities may have important consequences for the fate of organic matter in systems where these bloom forming species occur. The dynamics and development of transient blooms may also be affected as bacterial communities seem to influence phytoplankton species growth in contrasting ways.     

Long-term Changes and Seasonal Development of Phytoplankton in a Strongly Stratified,Hypertrophic Lake

Changes in the phytoplankton community of the hypertrophic, sharply stratified Lake Verevi have been studied over eight decades. Due to irregular discharge of urban wastewater, the trophic state of the lake has changed from moderately eutrophic to hypertrophic. We found that the trophic state in summer increased in the 1980s and remained at a hypertrophic level since then. Planktothrix agardhii was recorded first in the 1950s and became the dominant species in the 1980s, forming biomass maxima under the ice and in the metalimnion during the vegetation period. In summer 1989, P. agardhii contributed almost 100% of the phytoplankton biomass. Generally, the highest biomass values occurred in the metalimnion. In spring, when P. agardhii was less numerous, diatoms and cryptophytes prevailed. In springs 2000 and 2001 different diatoms dominated – Synedra acus var. angustissima (18.6 g m⁻³) and Cyclostephanos dubius (9.2 g m⁻³), respectively. In recent years, the spring overturn has been absent. In the conditions of strong thermal stratification sharp vertical gradients of light and nutrients caused a large number of vertically narrow niches in the water column. During a typical summer stage, the epilimnion, dominated by small flagellated chrysophytes, is nearly mesotrophic, and water transparency may reach 4 m. The lower part of the water column is hypertrophic with different species of cryptophytes and euglenophytes. A characteristic feature is the higher diversity of Chlorococcales. Often, species could form their peaks of biomass in very narrow layers, e.g. in August 2001 Ceratium hirundinella (18.6 g m⁻³) was found at a depth of 5 m (the lower part of the metalimnion with hypoxic conditions), Cryptomonas spp. (56 g m⁻³) at 6 m (with traces of oxygen and a relatively high content of dissolved organic matter) and euglenophytes (0.6 g m⁻³) at 7 m and deeper (without oxygen and a high content of dissolved organic matter).     

东洞庭湖浮游藻类群落的结构特征及物种多样性分析

2013~2014年对东洞庭湖浮游藻类种类组成和种群密度进行了取样调查,对其物种多样性和群落结构的时间和空间变化进行了分析。结果如下:1)共鉴定出该水域浮游藻类8门65属159种(含变种和变型),较前人有所增加,其中硅藻种类数量增幅较大;2)浮游藻类的平均密度为每升6.14×10~4个,平均生物量为0.20 mg/L,平均密度和生物量调查结果较前人均偏小;3)优势种主要有变异直链藻(Melosira varians)、颗粒直链藻(Melosira granulata)、啮蚀隐藻(Cryptomonas erosa)等16种,具有明显的季节变化;4)Shannon-Weiner多样性指数总平均值为4.11;Margalef丰富度指数总平均值为5.58;在季节变化上呈现出一致的趋势,均为3月11月6月9月,枯水期的物种多样性高于丰水期。Pielou均匀度指数总平均值为0.63。各采样点相比,八仙桥和扁山的多样性指数较小,荆江口最大;5)位于东洞庭湖东侧各采样点群落结构较为相似,与位于西侧和新墙河的样点差异较大;冬春季节的群落结构与夏秋季节存在一定差异。     

Recurring Seasonal Dynamics of Microbial Communities in Stream Habitats

Recurring seasonal patterns of microbial distribution and abundance in three third-order temperate streams within the southeast Pennsylvania Piedmont were observed over 4 years. Populations associated with streambed sediments and rocks (epilithon) were identified using terminal restriction length polymorphism (tRFLP) and sequencing of 16S rRNA genes selectively amplified with primers for the bacterial domain. Analyses of the relative magnitudes of tRFLP peak areas by using nonmetric multidimensional scaling resolved clear seasonal trends in epilithic and sediment populations. Oscillations between two dominant groups of epilithic genotypes, explaining 86% of the seasonal variation in the data set, were correlated with temperature and dissolved organic carbon. Sequences affiliated with epilithic phototrophs (cyanobacteria and diatom chloroplasts), a Rhodoferax sp., and a Bacillus species clustered in the summer, whereas sequences most closely related to “Betaproteobacteria” (putative Burkholderia sp.), and a putative cyanobacterium clustered in the fall/spring. The sediment genotypes also clustered into two groups, and these explained 85% of seasonal variation but correlated only with temperature. A summer tRFLP pattern was characterized by prevalence of “Betaproteobacteria,” “Gammaproteobacteria,” and a Bacillus sp., whereas the winter/spring pattern was characterized by phylotypes most closely related to “Firmicutes,” “Gammaproteobacteria,” and “Nitrospirae.” A close association between these headwater streams and their watersheds was suggested by the recovery of sequences related to microbial populations provisionally attributed to not only freshwaters but also terrestrial habitats.     

Seasonal Distribution of Phytoplankton in Yellowknife Bay,Great Slave Lake

The factors influencing the seasonal distribution of phytoplankton were determined between July 1975 and December 1977 in Yellowknife Bay, Great Slave Lake. The initiation of the spring bloom occurred during April of each year in response to changing light conditions and despite the 0 °C water temperatures. Although the plankton showed some fluctuations in density (100–400 mg/m³) during the summer, there was no vernal decrease in the size of the populations. The end of the growing season was characterized by a sharp drop in numbers near the end of October. Multiple regression analysis indicated that changes in the standing crop of the plankton during the summer were primarily related to temperature (r = 0.60) and the concentrations of NO₃–N (r=–0.74) and SiO₂ (r=–0.82). Changing light conditions probably had little effect on the population during the growing season. Chlamydomonas lapponica was dominant during April of each year. While the growth of this species caused a reduction in the concentrations of total phosphorus and NO₃–N, the level of SiO₂ remained constant and consequently diatoms (Asterionella formosa, Stephanodiscus astraea, Diatoma tenue var. elongatum and Melosira islandica) waxed rapidly during May. By the first of June, nutrient concentrations were low, thereby permitting the development of Dinobryon bavaricum and Dinobryon cylindricum. The extremely rapid decrease in the densities of common species during the fall was probably due to the rapid decline in temperature and light levels and the formation of ice on the bay.     

Seasonal Dynamics of Arbuscular Mycorrhizal Fungal Communities in Roots in a Seminatural Grassland

Symbiotic arbuscular mycorrhizal fungi (AMF) have been shown to influence both the diversity and productivity of grassland plant communities. These effects have been postulated to depend on the differential effects of individual mycorrhizal taxa on different plant species; however, so far there are few detailed studies of the dynamics of AMF colonization of different plant species. In this study, we characterized the communities of AMF colonizing the roots of two plant species, Prunella vulgaris and Antennaria dioica, in a Swedish seminatural grassland at different times of the year. The AMF small subunit rRNA genes were subjected to PCR, cloning, sequencing, and phylogenetic analysis. Nineteen discrete sequence types belonging to Glomus groups A and B and to the genus Acaulospora were distinguished. No significant seasonal changes in the species compositions of the AMF communities as a whole were observed. However, the two plant species hosted significantly different AMF communities. P. vulgaris hosted a rich AMF community throughout the entire growing season. The presence of AMF in A. dioica decreased dramatically in autumn, while an increased presence of Ascomycetes species was detected.