Phosphoglycerate kinase pseudogenes in the tammar wallaby and other macropodid marsupials

Phosphoglycerate kinase (EC 2.7.2.3; PGK) exists in two forms in marsupials. PGK1 is an X-linked house-keeping enzyme, and PGK2 is a mainly testis-specific enzyme under autosomal control. We have used PGK1 probes derived from two closely related species of macropodid marsupials (kangaroos and wallabies) to demonstrate the existence of a large family of pseudogenes in the tammar wallaby (Macropus eugenii). Over 30 fragments are detectable after Taq digestion. We estimate that there are 25–30 copies per genome. Most are autosomally inherited and are apparently not closely linked. Only two restriction fragments that appeared to be sex linked could be detected. Varying degrees of hybridization of fragments to the probes suggest different levels of homology, and hence different ages of origin. The existence of two PGK1 homologous restriction fragments from the X and a large number from the autosomes was also demonstrated by somatic cell hybridization for two other macropodid species, the wallaroo (M. robustus) and the red kangaroo (M. rufus). These results are compared with those from human and mouse, and it is suggested that the propensity of PGK1 to form pseudogenes is an ancient (130 MYR BP) characteristic of mammals. The high level of polymorphism detected in the tammar makes these PGK1 probes potentially useful for measuring genetic variability in this species and other macropodids.     

Klossiella (Apicomplexa, Klossiellidae) in petaurid and macropodid marsupials in Australia

Six new species of Klossiella are described in the kidneys of Australian marsupials: Klossiella rufogrisei in Bennett's Wallaby, Macropus rufogriseus; Klossiella rufi in the Red Kangaroo, Macropus rufus; Klossiella thylogale in the Red-Bellied or Tasmanian Pademelon, Thylogale billardierii; Klossiella beveridgei in the Spectacled Hare-Wallaby, Lagorchestes conspicillatus; Klossiella bettongiae in the Tasmanian Bettong, Bettongia gaimardi; and Klossiella schoinobatis in the petaurid Greater Glider, Petauroides volans. It is concluded that the genus Klossiella has radiated widely among Australian marsupials, and that since it is present in American marsupials, it may have an ancient association with the subclass.     

Foraging behavior of Campoletis sonorensis in response to Heliothis virescens and cotton plants

Wind tunnel flight behavior of inexperienced female Campoletis sonorensis (Cameron) (Hymenoptera; Ichneumonidae) in response to its larval host Heliothis virescens (F.) (Lepidoptera: Noctuidae) feeding on the host plant cotton (Gossypium hirsutum L.) is described. The flight behavioral sequence was determined by quantification of frequencies of observed behaviors and probabilities of first-order behavioral transitions. Comparison of inexperienced C. sonorensis flights to undamaged and damaged cotton indicated that stimuli from undamaged plants alone are adequate to elicit the complete flight behavioral sequence observed in response to H. virescens feeding on cotton.Parasitoid foraging behavior was also analyzed after landing on the stimulus. This behavior appeared to be random in its initial stages, but became sequential after location of evidence of a host. Analysis of foraging on undamaged and 3 treatments of damaged cotton resulted in the determination that parasitoids tend to remain on damaged plants longer than undamaged plants although no significant difference was detected. C. sonorensis spent a greater percentage of their time foraging on host damaged plants than on undamaged plants.

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Résumé Les comportements d'évaluation de l'effectif d'hôtes potentiels et de la position des hôtes par C. sonorensis (Hyméno.: Iccheumonidae) ont été quantifiés pour déterminer les séquences significatives des événements comportementaux. La localisation de la colonie potentielle d'hôtes est apparue comme une séquence régulière des événements comportementaux. Une fois que le parasitoïde a localisé une colonie potentielle, on a constaté que la recherche au hasard des hôtes se poursuit jusqu'à ce qu'il ait la démonstration qu'il s'agit d'une plante attaquée. La localisation par le parasitoïde d'un hôte certain a consitué une autre séquence régulière des événements comportementaux terminant la localisation de l'hôte.L'influence de pieds de coton intacts, de pieds abîmés mécaniquement et de pieds occupés par des chenilles du 3ème stade de l'hôte et de plantes dont les chenilles ont été retirées juste avant l'expérience a été déterminée en modifiant la composition du complexe hôte/plante. Des femelles naïves de C. sonorensis ont montré en présence de pieds de coton intacts apparemment toutes les séquences comportementales de vol impliquées dans la localisation d'une colonie potentielle d'hôtes. Une fois que le parasitoïde a atteint la colonie potentielle d'hôtes, la présence de dégâts de l'hôte n'a pas modifié le temps passé sur la plante, mais a modifié le temps consacré à la prospection.

     

Foraging time and spatial patterns of predation in experimental populations

Summary Responses of the predaceous mites Phytoseiulus persimilis, Typhlodromus (=Metaseiulus) occidentalis, and Amblyseius andersoni to spatial variation in egg density of the phytophagous mite, Tetranychus urticae, were studied in the laboratory.The oligophagous predator P. persimilis showed initially a direct density dependent foraging time allocation and variation in foraging time increased with prey density. With changes in prey density due to predation, predator foraging rates (per hour) decreased with time and density dependent foraging gradually became density independence, because P. persimilis continued to respond to initial prey density, instead of the changing prey density and distribution. The consequent spatial pattern of predation by P. persimilis was density independent, although slopes of predation rate-prey density regressions increased with time.Compared with P. persimilis, the narrowly polyphagous predator T. occidentalis responded relatively slowly to the the presence or absence of prey eggs but not to prey density: the mean and variation of foraging time spent in patches with prey did not differ with prey density, but was significantly greater in patches with prey eggs than in patches without eggs. Prey density and distribution changed only slightly due to predation and overall foraging rates remained more or less constant. The consequent spatial pattern of predation by T. occidentalis was inversely density dependent. As with P. persimilis, slopes of predation rate-prey density regressions increased with time (i.e. the inverse density dependence in T. occidentalis became weaker through time).The broadly polyphagous predator A. andersoni showed density independent foraging time allocation with variation independent of prey density. With changes in prey density over time due to prey depletion, overall foraging rates decreased. The consequent spatial pattern of predation by A. andersoni also changed through time; it initially was inversely density dependent, but soon became density independent.Overall, P. persimilis and T. occidentalis spent more time in prey patches than A. andersoni, suggesting that A. andersoni tended to spend more time moving outside patches. The overall predation rates and searching efficiency were higher in P. persimilis than in A. andersoni and T. occidentalis. Predator reproduction was highest in P. persimilis, lower in T. occidentalis and the lowest A. andersoni.The differences in response to prey distribution among the three predaceous species probably reflect the evolution of these species in environments with different patterns of prey distribution. The degree of polyphagy is a major determinant of the aggregative response, but other attributes such as handling time are also important in other aspects of phytoseiid foraging behavior (e.g. searching efficiency or predation rate).     

Response of shoaling fish to the threat of aerial predation

Synopsis Many species of shoaling fish are preyed upon by aerial predators. However, to date there has been no analysis of the evasive response of a group of shoaling fish to an aerial threat or attack. The response of a shoal of fish encompasses a suite of behaviors starting with a startle response. Shoals of golden shiner, Notemigonus crysoleucas, responded to the threat of aerial predation from a kingfisher model with a startle response, an increase in shoal depth, an increase in polarity, swimming in the opposite direction under the model predator, shoal compression along the depth axis, and shoal expansion on the plane perpendicular to the depth axis. It was hypothesized that shoal compression along the depth axis serves to increase predator confusion by placing more fish in the predator's visual field. This compression was termed the ‘plane of confusion’.     

Multiple measures elucidate glucocorticoid responses to environmental variation in predation threat

Predator-induced changes in the glucocorticoid responses of prey have been proposed to mediate indirect predator effects on prey demography. Ambiguities exist, however, as to whether differences in predation threat in the environment at large affect the mean glucocorticoid response in wild birds and mammals, and whether this is likely to affect reproduction. Most studies to date that have examined glucocorticoid responses to environmental variation in predation threat have evaluated just one of the several potential measures of the glucocorticoid response, and this may be the source of many ambiguities. We evaluated multiple measures of the glucocorticoid response [plasma total CORTicosterone, corticosteroid binding globulin (CBG) and free CORT] in male and female song sparrows (Melospiza melodia) sampled at locations differing in predation threat in the environment at large, where we have previously reported reproductive differences suggestive of indirect predator effects. Total CORT varied markedly with predation threat in males but not females whereas the opposite was true for CBG, and both sexes demonstrated the same moderately significant free CORT response. Considering all three indices, a glucocorticoid response to environmental variation in predation threat was evident in both sexes, whereas there were ambiguities considering each index singly. We conclude that collecting multiple physiological measures and conducting multivariate analyses may provide a preferable means of assessing glucocorticoid responses to environmental variation in predation threat, and so help clarify whether such glucocorticoid changes affect reproduction in wild birds and mammals.     

Effects of water restriction on digestive function in two macropodid marsupials from divergent habitats and the feral goat

The effects of water restriction on digestive function in the euro (Macropus robustus erubescens) found in the arid zone of inland Australia, the eastern wallaroo (M.r.robustus) from more mesic regions of eastern Australia, and the feral goat (Capra hircus) found throughout the range of M. robustus, were compared in order to examine some physiological adaptations required by herbivores for the exploitation of arid environments. Eight animals of each species were held in individual metabolism cages in temperature-moderated rooms and given a chopped hay diet ad libitum. Half the animals were restricted to 40 ml water·kg^-0.80·day^-1. This was 40%, 32% and 57% of voluntary drinking water intake in the euro, wallaroo and goat, respectively. All species responded to water restriction by reducing faecal, urinary and evaporative water losses in association with reductions in feed intake. All animals increased urine osmolality and electrolyte concentrations but not to maximal levels, while packed-cell volume and plasma osmolality and electrolyte concentrations were unaffected by water restriction. The euro displayed a suite of characteristics that separated it from the wallaroo in terms of physiological adaptation, including lower voluntary water intake, an increase in fibre digestibility and maintenance of nitrogen balance during water restriction, and lower faecal water efflux associated with a consistently lower faecal water content (54% versus 59% water in the wallaroo during water restriction, P<0.05). The euro's colon was 37% longer (P<0.01) than that of the wallaroo. The goat had the lowest faecal water efflux (P<0.05) and the longest colon (P<0.001). Water restriction did not affect water content in digesta, nor short-chain fatty acid concentrations or production rates in vitro. Total body water, as a proportion of body mass, was depressed (P<0.05) in the macropodids, but not in the goat. The reduction in dietary nitrogen intake, which accompanied water restriction, was partially compensated by an increase in urea degradation in the gut from 68% to 76% of urea synthesis water-restricted macropodids. These responses to water restriction are discussed in relation to those reported in other macropodid and ruminant species.Abbreviations BM body mass - SCFA short-chain fatty acids - DM dry matter - PCV packed-cell volume     

Adaptive coloration, behavior and predation vulnerability in three juvenile north Pacific flatfishes

Adaptive color change in flatfish has long been of interest to scientists, yet rarely studied from an ecological perspective. Because color change can take a day or so in some species, movement between sediments with differing color or texture may render fish more conspicuous to predators. We conducted laboratory experiments to test the following hypotheses related to adaptive color change in flatfish: 1) fish which do not cryptically match sediment will be more vulnerable to predation, 2) fish will reduce activity and bury to minimize conspicuousness when on a sediment they mismatch, and 3) fish will choose a sediment they match when given a choice. Experiments were conducted using three co-occurring north Pacific juvenile flatfishes: English sole Parophrys vetulus, northern rock sole Lepidopsetta polyxystra and Pacific halibut Hippoglossus stenolepis. As per expectations, juvenile flatfish were more vulnerable to visual predators when they mismatched sediment. Mismatched fish tended to behave differently than fish which matched the sediment. Rather than burying and becoming inactive, they became more active and less likely to bury, perhaps contributing to their predation vulnerability. This increased activity may have represented search for better matching sediment, a stress response, or conspicuousness-related density dependent behavior. Fish which had acclimated to light colored sediment preferred light over dark sediment in choice trials. In contrast, fish acclimated to dark sediment demonstrated no preference. These experiments demonstrate that adaptive coloration is an integral part of the flatfish detection minimization strategy and that movement between habitats can increase risk of predation.     

Behavioural adjustment in response to increased predation risk: a study in three duck species

Predation directly triggers behavioural decisions designed to increase immediate survival. However, these behavioural modifications can have long term costs. There is therefore a trade-off between antipredator behaviours and other activities. This trade-off is generally considered between vigilance and only one other behaviour, thus neglecting potential compensations. In this study, we considered the effect of an increase in predation risk on the diurnal time-budget of three captive duck species during the wintering period. We artificially increased predation risk by disturbing two groups of 14 mallard and teals at different frequencies, and one group of 14 tufted ducks with a radio-controlled stressor. We recorded foraging, vigilance, preening and sleeping durations the week before, during and after disturbance sessions. Disturbed groups were compared to an undisturbed control group. We showed that in all three species, the increase in predation risk resulted in a decrease in foraging and preening and led to an increase in sleeping. It is worth noting that contrary to common observations, vigilance did not increase. However, ducks are known to be vigilant while sleeping. This complex behavioural adjustment therefore seems to be optimal as it may allow ducks to reduce their predation risk. Our results highlight the fact that it is necessary to encompass the whole individual time-budget when studying behavioural modifications under predation risk. Finally, we propose that studies of behavioural time-budget changes under predation risk should be included in the more general framework of the starvation-predation risk trade-off.     

Hide, rest or die: a light-mediated diapause response in Daphnia magna to the threat of fish predation

1. In a laboratory batch culture experiment, a diapause response of Daphnia magna to a simulated threat of fish predation was tested at various light intensities, which under natural conditions determine potential vulnerability of Daphnia to visual planktivorous fish. 2. Under moderate light intensity (1.4 μmol m^?2 s^?1) that allows effective predation by fish, the proportion of females producing dormant eggs was significantly higher than under dim light conditions (0.001 μmol m^?2 s^?1) that are not favourable for visual detection of prey. Production of dormant eggs was not observed in complete darkness or in treatments missing fish kairomones, irrespective of tested light conditions. 3. The observed phenomenon is interpreted as a flexible response of prey to the conditional risk of predation assessed by Daphnia according to the presence of fish‐derived cues on the one hand and the presence of dark refugia on the other. Irrespective of the presence of fish kairomones, Daphnia may not produce resting eggs as long as a safe, dark, bottom zone is accessible.     

Sex differences in response to coalitional threat

Intergroup conflict poses a different kind of threat for men and women — a difference that can be expected to have implications for cognitive as well as behavioral processes. Participants were primed with a threat from a rival coalition vs. a control condition. Reaction times were measured on a lexical-decision task in response to ideation consistent with coalitions or with friendship/protective care. When primed for coalitional threat, men showed fast access to positive coalitional ideation (suggesting facilitation). In contrast, women showed exceptionally fast access to positive friendship/protective care ideation. Findings were interpreted as reflecting sexually dimorphic responses to coalitional threat that are consistent with differential advertising of their assets to others.     

Gene expression profiles in Rana pirica tadpoles following exposure to a predation threat

Background

Rana pirica tadpoles show morphological changes in response to a predation threat: larvae of the dragonfly Aeshna nigroflava induce heightened tail depth, whereas larval salamander Hynobius retardatus induce a bulgy morphology with heightened tail depth. Although both predators induce similar tail morphologies, it is possible that there are functional differences between these tail morphs.

Results

Here, we performed a discriminant microarray analysis using Xenopus laevis genome arrays to compare tail tissues of control and predator-exposed tadpoles. We identified 9 genes showing large-scale changes in their expression profile: ELAV-like1, methyltransferase like 7A, dolichyl-phosphate mannosyltransferase, laminin subunit beta-1, gremlin 1, BCL6 corepressor-like 1, and three genes of unknown identity. A further 80 genes showed greater than 5 fold differences in expression after exposure to dragonfly larvae and 81 genes showed altered expression after exposure to larval salamanders. Predation-threat responsive genes were identified by selecting genes that reverted to control levels of expression following removal of the predator. Thirteen genes were induced specifically by dragonfly larvae, nine others were salamander-specific, and sixteen were induced by both. Functional analyses indicated that some of the genes induced by dragonfly larvae caused an increase in laminins necessary for cell adhesion in the extracellular matrix. The higher expression of gremlin 1 and HIF1a genes after exposure to dragonfly larvae indicated an in vivo hypoxic reaction, while down-regulation of syndecan-2 may indicate impairment of angiogenesis. Exposure to larval salamanders caused down-regulation of XCIRP-1, which is known to inhibit expression of adhesion molecules; the tadpoles showed reduced expression of cα(E)-catenin, small muscle protein, dystrophin, and myosin light chain genes.

Conclusion

The connective tissue of tadpoles exposed to larval salamanders may be looser. The differences in gene expression profiles induced by the two predators suggest that there are functional differences between the altered tail tissues of the two groups of tadpoles.

Electronic supplementary material

The online version of this article (doi:10.1186/s12864-015-1389-4) contains supplementary material, which is available to authorized users.     

Sparrows and a brushpile: Foraging responses to different combinations of predation risk and energy cost

Our observations of wintering house sparrows (Passer domesticus) feeding on cracked corn at feeders placed at different distances from a brushpile and in positions differentially exposed to the wind supported the hypothesis that where food patches are equal in net energy return, foragers use the one furnishing the most protection from predation. Results reinforced the hypothesis that when food sources furnish equal protection from predators, homeotherms below their lower critical temperature use the one providing the largest net energy return. When the sparrows had available both a colder, safer feeding site and a warmer, riskier one, they frequented both over the course of the winter and, as predicted, their use of the colder, safer site was negatively correlated with wind velocity and positively related to temperature and solar radiation. In this last case, it appeared the birds decided where to feed on the basis of some threshold difference between metabolic rates at the colder, safer site and the warmer, riskier location.     

Foraging patterns of voles at heterogeneous avian and uniform mustelid predation risk

Temporal variation of antipredatory behavior and a uniform distribution of predation risk over refuges and foraging sites may create foraging patterns different from those anticipated from risk in heterogenous habitats. We studied the temporal variation in foraging behavior of voles exposed to uniform mustelid predation risk and heterogeneous avian predation risk of different levels induced by vegetation types in eight outdoor enclosures (0.25 ha). We manipulated mustelid predation risk with weasel presence or absence and avian predation risk by reducing or providing local cover at experimental food patches. Foraging at food patches was monitored by collecting giving-up densities at artificial food patches, overall activity was automatically monitored, and mortality of voles was monitored by live-trapping and radiotracking. Voles depleted the food to lower levels in the sheltered patches than in the exposed ones. In enclosures with higher avian predation risk caused by lower vegetation height, trays were depleted to lower levels. Unexpectedly, voles foraged in more trays and depleted trays to lower levels in the presence of weasels than in the absence. Weasels match their prey's body size and locomotive abilities and therefore increase predation risk uniformly over both foraging sites and refuge sites that can both be entered by the predator. This reduces the costs of missing opportunities other than foraging. Voles changed their foraging strategy accordingly by specializing on the experimental food patches with predictable returns and probably reduced their foraging in the matrix of natural food source with unpredictable returns and high risk to encounter the weasel. Moreover, after 1 day of weasel presence, voles shifted their main foraging activities to avoid the diurnal weasel. This behavior facilitated bird predation, probably by nocturnal owls, and more voles were killed by birds than by weasels. Food patch use of voles in weasel enclosures increased with time. Voles had to balance the previously missed feeding opportunities by progressively concentrating on artificial food patches.     

Foraging modes of stream benthic fishes in relation to their predation effects on local prey density

Habitat use and foraging behavior of two benthic insectivorous gobies, Rhinogobius sp. CO (cobalt type) and Rhinogobius sp. DA (dark type), were examined in relation to their predation effects on local prey density in a small coastal stream in southwestern Shikoku, Japan. Correlations among the foraging range, frequency of foraging attempts and current velocity indicated that individuals using fast-current habitats had small foraging ranges and infrequently made foraging attempts while those in slow currents frequently foraged over large areas. The former and the latter were recognized as ambush and wandering foragers, respectively. Interspecific comparisons of habitat use, foraging behavior and prey preference suggested that Rhinogobius sp. CO selectively forage mobile prey by ambushing in fast currents, whereas Rhinogobius sp. DA randomly forage available prey by wandering in slow-current habitats. A cage experiment was conducted to assess prey immigration rate and the degree of predation effects on local prey density in relation to current velocity. The results of the experiment support, at least in part, our initial predictions: (1) prey immigration rates increase with current velocity and (2) the effects of fish predation on local prey density are reduced as current velocity increases. Overall results illustrated a link between the foraging modes of the stream gobies and their predation effects on local prey density: fish adopt ambush foraging in fast currents, where the decrease in prey density tends to be less, whereas fish actively forage over large areas in slow currents, where the decrease in prey is relatively large.     

The influence of predation risk on threat display in great tits

In wintering birds, conflicts over food are often resolved bythreat displays. For displays to be effective, there oughtto be a cost associated with displaying. We investigated whetherincreased vulnerability to predators due to reduced vigilancecould be such a cost. Conflicts ought then to be resolved usingfewer or less intense displays in conditions of high risk. We also looked for differences between dominants and subordinatesin their reaction to risk. Because there is considerable evidencethat subordinate wintering birds forage in riskier places thandominants, one might expect dominants to be less successfulin conflicts under high predation risk. In our experiment,nine flocks of four or five wintering male great tits were keptin outdoor aviaries. In the predation risk treatment, a stuffedpygmy owl was briefly shown before birds were allowed accessto a feeder. In the control treatment the owl did not appear.The predator presentation caused a reduction in the amountof aggression shown by subordinates, whereas for dominants there was no statistically significant change. Dominants were at leastas successful in subduing subordinates under high risk as underlow risk. A possible interpretation is that our experimentreflected a natural foraging situation for great tits, whereephemeral resources can appear unpredictably. In such situations,dominants may need to be bold to gain priority of access even under increased risk of predation, whereas a subordinate wouldgain little by risking a conflict with small chances of winning.