Binding of α-synuclein with Fe(III) and with Fe(II) and biological implications of the resultant complexes

Parkinson’s disease (PD) is hallmarked by the abnormal intracellular inclusions (Lewy bodies or LBs) in dopaminergic cells. Amyloidogenic protein α-synuclein (α-syn) and iron (including both Fe(III) and Fe(II)) are both found to be present in LBs. The interaction between iron and α-syn might have important biological relevance to PD etiology. Previously, a moderate binding affinity between α-syn and Fe(II) (5.8 × 10³ M⁻¹) has been measured, but studies on the binding between α-syn and Fe(III) have not been reported. In this work, electrospray mass spectrometry (ES-MS), cyclic voltammetry (CV), and fluorescence spectroscopy were used to study the binding between α-syn and Fe(II) and the redox property of the resultant α-syn-Fe(II) complex. The complex is of a 1:1 stoichiometry and can be readily oxidized electrochemically and chemically (by O₂) to the putative α-syn-Fe(III) complex, with H₂O₂ as a co-product. The reduction potential was estimated to be 0.025 V vs. Ag/AgCl, which represents a shift by −0.550 V vs. the standard reduction potential of the free Fe(III)/Fe(II) couple. Such a shift allows a binding constant between α-syn and Fe(III), 1.2 × 10¹³ M⁻¹, to be deduced. Despite the relatively high binding affinity, α-syn-Fe(III) generated from the oxidation of α-syn-Fe(II) still dissociates due to the stronger tendency of Fe(III) to hydrolyze to Fe(OH)₃ and/or ferrihydrite gel. The roles of α-syn and its interaction with Fe(III) and/or Fe(II) are discussed in the context of oxidative stress, metal-catalyzed α-syn aggregation, and iron transfer processes.     

Detection of the genotoxicity of air pollutants in and around the city of São Paulo (Brazil) with the Tradescantia-micronucleus (Trad-MCN) assay

Tradescantia pallida cv. purpurea, a popular garden plant in Brazil, was used for the Tradescantia micronucleus (Trad-MCN) assay. In situ monitoring of the genotoxicity of air pollutants was carried out by sentinel approach, using the plant grown in the field or using the plants in pots which were carried to the monitoring sites. Two highly polluted sites, in S?o Paulo city (Cerqueira Cesar and Congonhas) and two rural sites (the cities of Pirassununga, 200 km and Caucaia do Alto, 50 km from S?o Paulo, respectively) were chosen for this study, in order to determine the gradient difference of the air pollution levels. Sentinel plants in Congonhas site presented the highest frequency of micronuclei (4.4%), in comparison with 2.2 and 2.3% found in plants from Pirassununga and Cerqueira Cesar sites, respectively (Kruskal-Wallis; P<0.020). Significant increases (F test; P<0.0001) in the frequency of micronuclei were observed in plants exposed in the polluted urban sites (Cerqueira Cesar: 5.7%; Congonhas: 7.1% and Caucaia do Alto: 2.3%). The increase in the frequency of micronuclei observed indicates the potential risk of mutagenicity in presence of high concentrations of pollutants.     

Nemertea inhabiting the Haploops (Amphipoda) community of the northern Øresund with special reference to the biology of Nipponnemertes pulcher (Hoplonemertea)

The densities of nemerteans and associated fauna on a soft-bottom sampling station (27–30 m deep) in the Øresund were determined from 47 cores (each 135 cm² in cross-section; 20 + cm deep) collected from September to December 1989; these data were compared with 14 cores taken from the same location in December 1982. Nine species of nemerteans were identified from cores and dredge samples: Palaeonemertea — Callinera-like sp.; Heteronemertea — Cerebratulus fuscus, C. marginatus, Lineus bilineatus, Micrura fasciolata, M. purpurea; Hoplonemertea — Amphiporus bioculatus, A. dissimulans, Nipponnemertes pulcher. Mean numbers of heteronemerteans were 32 and 10 m^?2 in 1982 and 1989, respectively, and hoplonemerteans were 90 and 71 m^?2 , respectively. Only one palaeonemertean was collected during both years. Mean densities of the dominant species, N. pulcher, were similar for the two years, 74 and 68 m^?2. The dominant groups of macrofauna (n m^?2) in 1989 were ostracods (1028), amphipods (618), polychaetes (514), and ophiuroids (449). Amphipods (>90% Haploops spp.) and polychaetes (at least 30 spp.) are the major potential prey for hoplonemerteans and heteronemerteans, respectively. Laboratory feeding experiments with N. pulcher revealed that it consumed amphipods (Haploops tenuis and H. tubicola) at a rate of 2.6 worm^?1 d^?1 during the first 12 hours, but after 36 hours and beyond the rate was maintained at approximately 0.2 worm^?1 d^?1. Beyond 12 hours this nemertean showed a tendancy to only partially evacuate its prey. It was demonstrated experimentally that N. pulcher has a supply of toxin capable of killing six amphipods in approximately one hour. Limited tests showed that N. pulcher fed on the cumacean Diastylis tumida, but not on the amphipod Maera loveni or the ostracod Philomedes globosus, and that Amphiporus dissimulans readily attacked Haploops spp., but not Maera or Philomedes. Although the results of laboratory experiments are tentative, they do suggest that suctorial hoplonemerteans can exert a potentially significant effect on benthic communities. Employing seven species of polychaetes as prey for Cerebratulus fuscus and Micrura fasciolata, only the latter responded positively to one of them, Glycera alba. The hermit crab Pagurus bernhardus violently rejected N. pulcher in all feeding trials.     

Interactions of quinone with the iron-sulfur protein of the bc(1) complex: is the mechanism spring-loaded?

Since available structures of native bc(1) complexes show a vacant Q(o)-site, occupancy by substrate and product must be investigated by kinetic and spectroscopic approaches. In this brief review, we discuss recent advances using these approaches that throw new light on the mechanism. The rate-limiting reaction is the first electron transfer after formation of the enzyme-substrate complex at the Q(o)-site. This is formed by binding of both ubiquinol (QH(2)) and the dissociated oxidized iron-sulfur protein (ISP(ox)). A binding constant of approximately 14 can be estimated from the displacement of E(m) or pK for quinone or ISP(ox), respectively. The binding likely involves a hydrogen bond, through which a proton-coupled electron transfer occurs. An enzyme-product complex is also formed at the Q(o)-site, in which ubiquinone (Q) hydrogen bonds with the reduced ISP (ISPH). The complex has been characterized in ESEEM experiments, which detect a histidine ligand, likely His-161 of ISP (in mitochondrial numbering), with a configuration similar to that in the complex of ISPH with stigmatellin. This special configuration is lost on binding of myxothiazol. Formation of the H-bond has been explored through the redox dependence of cytochrome c oxidation. We confirm previous reports of a decrease in E(m) of ISP on addition of myxothiazol, and show that this change can be detected kinetically. We suggest that the myxothiazol-induced change reflects loss of the interaction of ISPH with Q, and that the change in E(m) reflects a binding constant of approximately 4. We discuss previous data in the light of this new hypothesis, and suggest that the native structure might involve a less than optimal configuration that lowers the binding energy of complexes formed at the Q(o)-site so as to favor dissociation. We also discuss recent results from studies of the bypass reactions at the site, which lead to superoxide (SO) production under aerobic conditions, and provide additional information about intermediate states.     

Description of the larva of Kempnyia colossica (Navás) (Plecoptera: Perlidae) with biological notes

In this paper, the larva of Kempnyia colossica (Navás 1934) is described based on material collected in Parque Estadual Intervales, São Paulo State, and biological notes are presented.     

Dynamics of a vortex with the U-shaped filament (ends “anchored”) in the heart of the ground squirrel

The dynamics of an electrical scroll wave with the U-shaped filament with both ends of the filament being “anchored” on the endocardial surface and the dependence of the structure of pseudoECG on the dynamics of the vortex during the development of polymorphic tachysystolia have been studied by applying premature stimuli to the “target phase” with subsequent registration of the spatial and temporal distribution of electrical potential throughout the surface (endocardial and epicardial) of a thin (≈1 mm) preparation. It was found that (1) the pseudoECG of the polymorphic form during the tachysystolia attack can be observed in the case that the position of the filament ends on the surfaces of the preparation does not practically change from turn to turn (filament ends are “anchored”); (2) the thread of a scroll wave during this attack can twist and untwin (twisted filament), just as it was the case for scroll waves with a straight filament; (3) in the case of pseudoECG of polymorphic form, the twisting and untwining of the filament were stronger (the angle of maximal twisting was 120 degrees and more), and the angle of twisting changed by a substantially greater value from turn to turn as compared with the pseudoECG of monomorphic form; (4) in the case of pseudoECG of polymorphic form, the time interval between the appearance of waves on the surfaces of the preparation (T _epi-endo) was substantially greater and changed to a greater extent from turn to turn of the vortex; and (5) simultaneously with the appearance of pseudoECG of polymorphic form and the onset of changes in the twisting of the scroll and the T _epi-endo interval indicated in (2–4), significant changes in the patterns of coverage of the surface by excitation occurred. Based on the results obtained, an explanation of the reasons for the appearance of excitation breakdown patterns on the surface of the myocardium was proposed, which differs from the traditional viewpoint. These patterns may be the result of reflection on myocardial surfaces of the activity of not different simultaneously occurring sources of initiation of excitation but of a single three-dimensional vortex whose filament twists when passing through the thickness of the myocardium and can closely approach one or the other surface.     

Additional characterization of the two oxygen-containing compounds formed by the interaction of phthalocyaninatoiron(II) and dioxygen. Reproducible synthesis of the species isomorphic with the α form of Fe(II)Pc

The two compounds obtained by the interaction in solution of Fe(lI)Pc with O₂, presently considered two crystalline modifications of the μ-oxo dimer of Fe(III)Pc, are further characterized by visible absorption, XPS and Mössbauer spectra. The results stress the difference between the solid state properties of the two Fe(III) compounds.The behaviour of Fe(II)Pc and the two oxidized compounds in some chlorinated and non-chlorinated solvents, at different temperatures in the presence and absence of O₂, is reported. It is seen that heating the two Fe(III) products in 1-chloronaphthalene, or dimethylformamide, in vacuum sealed tubes, gives as a final product βFe(II)Pc. However, the same procedure in chlorobenzene or nitrobenzene yields, in a reproducible way, the pure oxygen-containing species which is isomorphic with αFe(II)Pc. Until now this product was only obtained in a fortuitous manner.     

Emission polarization study of the interaction of stellacyanin with tris(2, 2′-bipyridine)osmium(II)

The association of Os(bpy)₃²⁺ and stellacyanin was investigated by measuring the emission polarization of the excited state of the complex [*Os-(bpy)₃²⁺]. At high protein concentration (≥1 mM) Os(bpy)₃²⁺ appears to bind weakly to reduced stellacyanin and to oxidized stellacyanin to a lesser extent. These results are consistent with those obtained in a previous kinetic study on the redox quenching of *Ru(bpy)₃²⁺ by stellacyanin [1]. On excitation at 480 nm, the limiting polarization (P_o) of the *Os(bpy)₃²⁺ emission at 715 nm is 0.100. From P_o we concluded that (1) protein-bound Os(bpy)₃²⁺ has considerable rotational freedom independent of the protein-probe complex, and (2) the emission dipole of *Os(bpy)₃²⁺ is at ∼45° to the C₃ molecular axis.     

Interaction of aldolase with the troponin–tropomyosin complex of bovine muscle (Short Communication)

Ultracentrifugal studies of mixtures of aldolase and the troponin-tropomyosin complex from bovine muscle showed the existence of a labile interaction between these two myofibrillar constituents in imidazole buffers, pH6.8, I 0.02-0.10 (mol/l), and the suppression of the reaction by fructose 1,6-diphosphate. Analysis of the sedimentation-velocity patterns suggests the binding of more than 2 molecules of troponin-tropomyosin/molecule of aldolase. The results illustrate the necessity of considering additional or alternative sites to F-actin to account for the observed binding of aldolase to the thin filaments of skeletal muscle.     

Phytoplankton of the extremely acidic mining lakes of Lusatia (Germany) with pH ≤3

Most of the flooded, open-cast lignite mining lakes of Lusatia (Germany) impacted by the oxidation of iron sulphides (pyrite and marcasite) are extremely acidic. Of 32 lakes regularly studied from 1995 to 1998, 14 have a pH <3 (median pH 2.3–2.9). These lakes are typically buffered by high concentrations of Fe (III) and have high conductivity (1000–5000 S cm^–1). Concentrations of dissolved inorganic carbon (DIC) and phosphorus are typically extremely low. These factors result in a very different environment for algae than found in neutral and acid-rain impacted lakes. The planktonic algal flora is generally dominated by flagellates belonging to genera of Chlorophyta (Chlamydomonas), Heterokontophyta of the class Chrysophyceae (Ochromonas, Chromulina), Cryptophyta (Cyathomonas) and Euglenophyta (Lepocinclis, Euglena mutabilis). Near-spherical non-motile Chlorophyta (Nanochlorum sp.), Heterokontophyta of the class Bacillariophyceae (Eunotia exigua, Nitzschia), Dinophyta (Gymnodinium, Peridinium umbonatum), other Chlorophyta (Scourfieldia cordiformis) and Cryptophyta (Rhodomonas minuta) are also found.     

Kinetic studies of the reactions of some metal reconstituted metallothioneins with the electrophilic disulfide 5,5′-dithiobis(2-nitrobenzoic acid) (DTNB)

Rabbit liver Pt₇MT, Zn₇MT, Bi₇MT were reconstituted and the kinetic studies of the reactions with electrophilic disulphide 5, 5-dithiobis-(2-nitrobenzoic acid) (DTNB) were investigated to explore the possible mechanism of metals release from metallothioneins. It is revealed that the Pt₇MT, Zn₇MT react with DTNB biphasically, yielding a four-term rate law: Rate = k _1f [MT]+k _2f [DTNB][MT]+k _1s [MT]+k _2s [DTNB][MT]. Zn₇MT reacts with disulphide DTNB more rapidly and has significantly greater observed rate constants k _s, k _f than Pt₇MT. The kinetic data for Bi₇MT indicate that the reaction is monophasic and the rate law is proved to be: Rate = k ₁ [MT]+k ₂ [DTNB][MT]. The observed pseudo-first order rate constants for above MTs are insensitive to pH value. Based on the available experimental data, the different kinetic behaviors of MTs reactions with electrophilic disulphide DTNB and a possible mechanism to release the coordinated metal ions are discussed.     

Phylogeny of the tribe Colletieae (Rhamnaceae) – a sensitivity analysis of the plastid region trnL-trnF combined with morphology

The phylogenetic relationships within the tribe Colletieae (Rhamnaceae) were examined combining data from a previous morphological analysis with data from the trnL intron and trnL-F spacer. Previous studies have failed to confirm monophyly of the genus Discaria, the only genus of the tribe with an amphiantarctic distribution. The data set was analyzed using direct optimization as implemented in the computer program POY. Direct optimization searches for multiple optimal sequence alignments and is therefore well suited for analyzing DNA sequences including ambiguous alignable regions as found in the present study. Eight different costs were used for treating the indel information. Indels were treated as single events, equal to a fifth character state, or strings of gaps were treated as single events using different costs for opening a gap and extending the gap. The optimal cost set was selected by use of both character-based and topological congruence measures. Both congruence measures agreed upon a single optimal cost set. The resulting tree generally agrees with the current taxonomic treatment of the tribe Colletieae that recognizes six genera out of which three are monotypic. However, monophyly of Discaria was not supported and the results strongly suggest segregating D. nana and D. trinervis, and re-establishing the genus Ochetophila.We are grateful to the curator of the Herbario Gaspar Xuárez, Universidad de Buenos Aires (BAA), and to the curators of the Botanic Garden of the University of Copenhagen, Botanischer Garten und Botanisches Museum Berlin-Dahlem, Jardín Botánico Lucien Hauman (Facultad de Agronomía de la Universidad de Buenos Aires), Rancho Santa Ana Botanic Garden, and Royal Botanic Gardens, Melbourne, for permission to use material from their collections. María Elena Arce, María Martha Bianchi, Eugenia Chaia, and Neville Walsh kindly provided freshly collected material. We also thank Pablo A. Goloboff, Niels Klazenga, Pauline Y. Ladiges, Martín Ramírez, Ole Seberg, Llywela Williams, and two anonymous reviewers for critically reading earlier drafts of this paper. This work was supported in part by grants TG 028 (Universidad de Buenos Aires) and PIP 4027/96 (CONICET) to D. Medan. The University of Copenhagen supported Lone Aagesen (Ph.D. grant). Jürgen Kellermann received a Ph.D.-scholarship from the University of Melbourne.     

The reactions of organosulfur transfer reagents with Fe2(CO)9 and the synthesis of the Fe2(CO)6 derivative of α-lipoic acid

Treatment of Fe₂(CO)₉ with sulfur-transfer reagents of the types ImideSSImide and RSSImide where H-imide = phthalimide, succinimide, benzimidazole, morpholine and piperazine, and R  CH₂Ph and CMe₃ leads to cleavage of both the sulfursulfur bond and the sulfurnitrogen bond to give Fe₃(CO)₉S₂ in varying yields, some Fe₂(CO)₆S₂ plus low yields of the appropriate dimers of the type Fe₂(CO)₆(SR)(SR′), where R = R′ = phthal imido, CH₂Ph, CMe₃ and R = CH₂Ph, CMe₃, R′ = phthalimido. The naturally occurring cyclic disulfide D,L-α-lipoic acid, its methyl ester and amide react with Fe₂(CO)₉ to give Fe₂(CO)₆ derivatives wherein the sulfursufur bond has been broken.     

Organization of the lamina ganglionaris of the optic lobe of the butterfly Pararge aegeria (Linné) (Lepidoptera : Satyridae)

The present work reports on a neuroanatomical study of the butterfly Pararge aegeria (Lepidoptera : Satyridae) focusing on the lamina ganglionaris underlying two different regions of the retina of the compound eye: the dorsal rim area and the large dorsal region. No differences between both lamina regions, concerning the structure of the cartridges and the morphology of the identified neurons, could be detected. After passing the basement membrane, the visual cell axons are organized in retinotopic bundles (pseudocartridges), in which the axons of the 9 visual cells (V1 and 5, D2, 4, 6, 8, H3 and 7, B9) are arranged in the same way as in the retina. In the pseudocartridge there are no synaptic contacts. Before entering the lamina cartridge, the bundles rotate 90 °. The cartridges are joined by the fibres of 4 monopolar cells (L1, L2, L3 and L4), which could be identified and located inside the lamina cartridges in serial EM-sections. Golgi impregnations revealed the morphology of these fibres. Thus, the regional specialization of the retina (dorsal rim area and large dorsal region) does not seem to be reflected at the level of the first visual neuropil. Additionally, the cartridges of both lamina regions were investigated qualitatively for synaptic contacts among fibres. In addition to monadic chemical synapses and multiple contact synapses with presynaptic ribbons, cell contacts are also facilitated by invaginations and bridges. These cellular interactions and their functional implications are discussed.     

Molecular modeling of the interaction of 17(20)Z- and 17(20)E-pregna-5,17(20)-dien-21-oyl amides with the nuclear receptor LXRβ

Eight isomeric 17(20)Z- and 17(20)E-pregna-5,17(20)-dien-21-oyl amides, conformationally rigid oxysterol analogues, differing in the structure of the amide moiety have been analyzed. Analysis of low energy conformers revealed that all 17(20)E-isomers had three main energy minima (corresponding to the values of the dihedral angle θ_20,21 (C17=C20-C21=O) about ～0°, ～120°, and ～240°); the most occupied minimum corresponded to θ_20,21 about ～0°. 17(20) Z-Isomers had either one or two pools of stable low energy conformations. Molecular docking of these compounds to the ligand-binding site of the nuclear receptor LXRβ (a potential target) demonstrated high probability of binding of E-isomers but not Z-isomers with this target. Results of the molecular modeling were confirmed by an experiment in which stimulation of triglyceride biosynthesis in Hep G2 cells in the presence of 17(20)E-3β-hydroxypregna-5,17(20)-dien-21-oyl (hydroxyethyl)amide was demonstrated.     

Wrasses of the Galápagos Islands, with the description of a new deepwater species of Halichoeres (Perciformes: Labridae)

Halichoeres raisneri, new species, is described from three specimens captured by the Johnson Sea Link submersible at 114-125 m off Wolf Island, Galápagos. Distinctive features of the new species include a dorsally projecting fleshy flap along the posterior three-quarters of the upper lip and the absence of a canine tooth at the corner of the upper jaw. The body color of freshly caught females is pale pink with two yellow stripes and five prominent pink spots above the uppermost stripe. Similarities between the new species and other labrids are discussed, and a key to the 16 nominal species of Labridae known from the Galápagos Islands is provided. Decodon melasma is recorded from the Archipelago for the first time.     

Description of the type-series of Palaeocryptonyx donnezani Depéret, 1892 (Aves: Phasianidae) with the selection of a lectotype

We have re-examined the original type-series of Palaeocryptonyx donnezani Depéret, 1892 housed in the Laboratoire de Géologie de Lyon, Université Claude-Bernard Lyon 1 (France), and have selected a lectotype and paralectotypes. P. donnezani is the type species of the extinct genus Palaeocryptonyx, known from six species from different European Neogene and Pleistocene fossil localities. The species have been compared with different medium-sized Phasianidae species on the basis of our own study and data from the literature. The systematic position of P. donnezani has been questioned, because it has been misplaced in the extant genera Alectoris and Coturnix, but our analysis confirms its validity and its attribution to a separate genus; hence we also confirm the validity of the genus Palaeocryptonyx.     

Structural Mechanism of the Interaction of Alzheimer Disease Aβ Fibrils with the Non-steroidal Anti-inflammatory Drug (NSAID) Sulindac Sulfide

Alzheimer disease is the most severe neurodegenerative disease worldwide. In the past years, a plethora of small molecules interfering with amyloid-β (Aβ) aggregation has been reported. However, their mode of interaction with amyloid fibers is not understood. Non-steroidal anti-inflammatory drugs (NSAIDs) are known γ-secretase modulators; they influence Aβ populations. It has been suggested that NSAIDs are pleiotrophic and can interact with more than one pathomechanism. Here we present a magic angle spinning solid-state NMR study demonstrating that the NSAID sulindac sulfide interacts specifically with Alzheimer disease Aβ fibrils. We find that sulindac sulfide does not induce drastic architectural changes in the fibrillar structure but intercalates between the two β-strands of the amyloid fibril and binds to hydrophobic cavities, which are found consistently in all analyzed structures. The characteristic Asp²³-Lys²⁸ salt bridge is not affected upon interacting with sulindac sulfide. The primary binding site is located in the vicinity of residue Gly³³, a residue involved in Met³⁵ oxidation. The results presented here will assist the search for pharmacologically active molecules that can potentially be employed as lead structures to guide the design of small molecules for the treatment of Alzheimer disease.