多粘类芽孢杆菌HY96-2产脂肽类抗真菌物质的研究

对一株已经商业化的可防治植物枯萎病的生防菌-多粘类芽孢杆菌HY96-2发酵液中抗真菌活性物质进行了分离纯化,采用酸化、正丁醇萃取、乙酸乙酯沉淀、硅胶柱层析、Sephadex LH-20柱层析、高效液相色谱(HPLC)等方法分离得到了一个抗真菌活性化合物6B,经NMR、MS、MS/MS等光谱学方法鉴定其为Fusaricidin A。琼脂扩散法抑菌试验结果表明,6B对西瓜枯萎病菌、水稻纹枯病菌、灰霉病菌等15种植物病原真菌的最小抑菌浓度为12.5～50μg/mL。盆栽实验结果表明,6B对黄瓜灰霉病具有明显的防治效果,当6B的浓度达到250μg/mL时,防治效果高达95%。     

影响多粘类芽胞杆菌发酵液抑菌活性因素的研究

目的以点青霉菌作为指示菌,研究影响植物内生多粘芽胞杆菌发酵液抑菌活性的部分因素,为鉴定发酵液的抑菌物质提供基础研究。方法通过对多粘类芽胞杆菌发酵液进行不同处理（改变pH、加热、乙醇处理和蛋白酶酶解）,采用牛津杯法观察处理后发酵液对点青霉菌抑菌活性的变化。结果多粘类芽胞杆菌发酵液的抑菌效果在酸性条件下稳定,抑菌效果明显;而在中性和碱性范围内不稳定,抑菌效果不明显;多粘类芽胞杆菌发酵液中的有些抑菌物质具备良好的热稳定性;80％乙醇处理的发酵上清液有抑菌作用;经蛋白酶酶解后发酵液的抑菌活性变化不大。结论多粘类芽胞杆菌产生的乙醇沉淀物具有抑菌作用;发酵液中可能含有类细菌素的抑菌物质。     

多粘类芽孢杆菌及其产生的生物活性物质研究进展

多粘类芽孢杆(Paenibacillus polymyxa)对人或动植物没有致病性,某些菌株可产生如抗生素、拮抗蛋白、植物激素、酶、絮凝剂等多种生物活性物质.这些活性物质在植物病害防治以及人和动物疾病治疗方面具有诱人的应用前景.本文对近年来多粘类芽孢杆菌及其产生的生物活性物质的研究进展进行了综述.     

水稻生防菌株多粘类芽孢杆菌WY110抗菌蛋白的纯化及其基因克隆

通过DEAE—Sephadex A-50离子交换层析和Sephacryl S-200分子筛层析并采用抑菌活性和SDS-PAGE跟踪检测,从多粘类芽孢杆菌(Paenibacillus polymyxa)WY110菌株中分离纯化到一种对稻瘟病菌具有拮抗活性的抗菌蛋白P2(分子量约26kD)。平板抑菌试验表明,在PDA培养基上1．5μg纯化的P2蛋白即可有效地抑制稻瘟病菌菌丝生长,并对所测试的稻瘟病菌不同菌株均表现出抑菌活性。对P2蛋白的N—端测序结果表明,N—末端24个氨基酸序列为H2N—Ala—Asn—Val—Phe—Trp-Glu—Pro—Leu—Ser—Tyr—Tyr—Asn—Pro—Ser—Thr—Trp—Gln—Lys—Ala—Asp—Gly—Tyr—Ser—Asn—。以此为靶序列在网上用BlastP程序对蛋白质序列数据库进行了类似性检索,发现其与来源于芽孢杆菌的β-1,3-1,4-葡聚糖酶前体具有很高的同源性。进一步用此酶的特异底物地衣多糖进行了定性检测,验证了P2蛋白具有β-1,3-1,4-葡聚糖酶的活性。在此基础上,根据P2蛋白N-末端氨基酸序列及此酶C-端保守性序列设计合成了两端引物,以WY110基因组DNA为模板,通过PCR高保真扩增获得了P2蛋白编码基因的全序列,并克隆到pMD18-T载体上。核苷酸序列分析表明,其5′端72个核苷酸序列与蛋白N-端已知的24个氨基酸序列完全吻合,序列全长为636bp(GenBank登录号：AF284449),编码212个氨基酸;与已报道的一例来源于Paenibacillus polymyxa的β—1,3-1,4-葡聚糖酶基因(gluB)相比,核苷酸和氨基酸序列同源性分别为84％和88．7％。β-1,3-1,4-葡聚糖酶具有抗稻瘟病菌活性尚未见报道。P2蛋白编码基因的克隆为水稻抗病基因工程提供了有潜在应用价值的新的目的基因。     

全基因组预测多粘类芽孢杆菌SC2的分泌蛋白

为了解多粘类芽孢杆菌(Paenibacillus polymyxa)分泌蛋白的典型特征,本研究通过SignalP、ProtCompB、TMHMM、Phobius、LipoP、TatP、MEME和BLAST等多种分析程序对多粘类芽孢杆菌SC2菌株的全基因组共5 439条蛋白质序列进行生物信息的综合分析。结果表明,共获得146个具有典型信号肽的SPⅠ(Signal peptidase Ⅰ)分泌蛋白。信号肽序列中出现频率最高的氨基酸依次是亮氨酸、丙氨酸和丝氨酸。对信号肽的切割位点分析发现与枯草芽孢杆菌等一致,均为A-X-A型。通过MEME对信号肽序列进行分析发现存在一种保守基序。最后用BLAST分析发现,在146个分泌蛋白中,89个具有功能描述的分泌蛋白,主要是细胞生长代谢及生物降解酶类,其余57个皆为功能尚未明确的假定蛋白。本研究获得了多粘类芽孢杆菌SC2菌株分泌蛋白的信息,为进一步研究多粘类芽孢杆菌的蛋白功能奠定了基础。     

多粘芽孢杆菌204产生的高粘性多糖性质的研究

多粘芽孢杆菌(Bacillus polymyxa)204能在萄葡糖培养基中,产生具有高粘性的胞外多糖,发酵48—72h产率为12g/L。在浓度为0.6％,1.0％和1.5％时,它的粘度分别为327,3715和44650厘泊、该菌产生的胞外多糖是一种酸性多糖,它由葡萄糖、甘露糖和半乳糖组成;其克分子比为5:5:2;糖醛酸含量为5.5％;其中1％水溶液具有加热熔化、冷却后凝固的类琼脂性质。本文还讨论了浓度、pH、加热温度和时间,以及添加盐类对比多糖的影响。毒性试验证明,此多糖是无毒的,LD50>10g/kg。     

智能预测模型在多粘芽孢杆菌发酵中的应用

多粘芽孢杆菌发酵是一个极其复杂的生物反应过程,其诸多参数具有动态非线性。传统的发酵实验都是在不断地尝试中进行的,如果能预测发酵过程中的主要参数则会大大提高实验效率。用一种智能预测模型,即将Kohonen网络、Elman神经网络和粒子群优化算法有机结合,可以预测发酵过程中的主要参数。该模型的仿真实验结果符合多粘芽孢杆菌发酵的动力学特点,实现了部分参数的有效预测。研究结果表明该智能预测模型不但能够综合各种单一预测模型的优点,而且能够随时间的推移其内在结构不断变化,适用于多粘芽孢杆菌发酵过程的参数预测和特性优化。相对于传统预测方法,提高了预测效率。     

类芽孢杆菌BD3526抑菌活性物质的初步分离及性质测定北大核心CSCD

本实验以一株类芽孢杆菌BD3526为研究对象,采用丙酮浸提菌体得到抑菌活性粗品,通过Sephadex LH-20对样品进行初步纯化,结果表明粗品对藤黄微球菌CGMCC1.1848的最低抑菌浓度(MIC)为12.5 mg/m L,对金黄色葡萄球菌CGMCC1.879和单增李斯特菌CGMCC1.9136的MIC为25 mg/m L;Sephadex LH-20纯化样品对藤黄微球CGMCC1.1848的MIC为1 mg/m L,对金黄色葡萄球菌CGMCC1.879和单增李斯特菌CGMCC1.9136的MIC为2 mg/m L。样品经链霉蛋白酶处理后,活性基本消失。经加热、酸碱、胰蛋白酶、胃蛋白酶、脂肪酶、蛋白酶K处理后,活性没有明显变化。因此,类芽孢杆菌BD3526产生的是一种细菌素类的抑菌物质,该抑菌物质在食品和医疗行业有广阔的应用前景。     

一株抗真菌内生多粘芽孢杆菌的分离鉴定及对水稻恶苗病菌的抑制作用

目的：从番茄叶片中筛选具广谱抑真菌活性的拮抗内生细菌,研究其对水稻恶苗病菌的抑制作用。方法：采用对峙培养法筛选拮抗内生细菌,根据菌株形态、生理生化特性结合16S rRNA基因序列分析鉴定菌株;采用硫酸铵沉淀法提取抗菌粗蛋白,研究其对水稻恶苗病菌菌丝生长和孢子萌发的影响。结果：从番茄叶片中筛选到一株抗真菌内生多粘芽孢杆菌（Paenibacillus polymyxa）SD-6,该菌株具有广谱抑菌活性,对供试的13种植物病原真菌均具较强的抑制作用;该菌株产生的抗菌粗蛋白能够显著抑制水稻恶苗病菌菌丝生长和孢子萌发,并能导致萌发孢子畸形和破裂。结论：从番茄叶片中分离到一株能产生抗真菌蛋白并具有广谱高效抑真菌作用的内生多粘芽孢杆菌,该菌株及其抗菌蛋白具有防治水稻恶苗病的潜力。     

枯草芽孢杆菌高效生防乳剂研究

以枯草芽孢杆菌D17和Bs16(1 ∶ 1)共发酵物为主药,通过配方设计、制剂稳定性、抗紫外能力及其室内外抑菌生物活性实验,进行其高效生防乳剂优选。结果表明乳剂1和乳剂9最佳:其室内拮抗生物活性最强,小区试验中对灰霉菌的防效也可达85%以上,与常用的化学农药防效相当;持效期延长至15天以上,与常用化学农药有显著性差异;抗紫外能力强,经过180 min的紫外照射制剂单位体积的有效活菌量仍可达10⁹cfu/ml以上;储藏稳定性好,常温密封避阴条件下保质期可达1年以上,是具有较高商品开发价值的绿色环保型生物农药制剂。     

多粘类芽胞杆菌SC2基因敲除体系的建立

摘要:【目的】建立多粘类芽胞杆菌SC2 的基因敲除体系。【方法】利用电转化把温敏型自杀质粒pRN5101导入到多粘类芽胞杆菌SC2中。采用基因重组技术敲除SC2 中的多粘菌素基因E(pmxE),得到突变株SC2-E。利用抗细菌性能检测和高效液相色谱分析合成多粘菌素的能力,来证实pmxE基因是否被敲除。【结果】成功构建了多粘类芽胞杆菌SC2 的基因敲除体系。pRN5101转入SC2后能够在28℃复制,39℃自杀。突变株失去了合成多粘菌素的能力,成功敲除pmxE基因,验证了此体系的可用性。【结论】首次构建了多粘类芽胞杆菌的基因敲除体系,拓展了pRN5101的使用范围,为研究多粘类芽胞杆菌的基因功能提供了高效的遗传操作工具。     

多粘类芽胞杆菌利用生物柴油副产物粗甘油生产乙偶姻

研究多粘类芽胞杆菌利用廉价底物生物柴油副产物粗甘油批次发酵生产乙偶姻,考察不同pH条件、不同转速下乙偶姻、2,3-丁二醇和乙酸3种主要产物的产量,根据发酵结果设计一种三阶段溶氧调节的方法,结果表明:经76h批次发酵,乙偶姻产量为14.62 g/L,副产物2,3-丁二醇和乙酸分别为1.24和2.93 g/L;副产物量低,且易于分离,可以有效减少后期分离提取产物的成本。     

Inhibitory activity of Paenibacillus polymyxa SCE2 against human pathogenic micro-organisms

Paenibacillus polymyxa strain SCE2 was shown to inhibit the growth of different potential human pathogenic bacterial strains and fungi in vitro. To determine the genetic characterization of this antimicrobial substance, strain SCE2 was transformed with plasmid pTV32(Ts), a delivery vector for Tn917-lac. After transposition, four mutants were shown to have lost their capability to inhibit Micrococcus sp. and Staphylococcus aureus RN450, but they continued to inhibit the growth of Corynebacterium fimi NCTC7547 and Escherichia coli HB101. Hybridization experiments using the DNA of the four mutants digested with different endonucleases and pTV32(Ts) as a probe showed that the place of insertion of Tn917-lac in the chromosome was the same in mutants 4 and 36 and in mutants 31 and 59, but different between these pairs. It is thought possible that more than one antimicrobial substance is being produced by strain SCE2.     

Structure and activity of Paenibacillus polymyxa xyloglucanase from glycoside hydrolase family 44

The enzymatic degradation of plant polysaccharides is emerging as one of the key environmental goals of the early 21st century, impacting on many processes in the textile and detergent industries as well as biomass conversion to biofuels. One of the well known problems with the use of nonstarch (nonfood)-based substrates such as the plant cell wall is that the cellulose fibers are embedded in a network of diverse polysaccharides, including xyloglucan, that renders access difficult. There is therefore increasing interest in the "accessory enzymes," including xyloglucanases, that may aid biomass degradation through removal of "hemicellulose" polysaccharides. Here, we report the biochemical characterization of the endo-β-1,4-(xylo)glucan hydrolase from Paenibacillus polymyxa with polymeric, oligomeric, and defined chromogenic aryl-oligosaccharide substrates. The enzyme displays an unusual specificity on defined xyloglucan oligosaccharides, cleaving the XXXG-XXXG repeat into XXX and GXXXG. Kinetic analysis on defined oligosaccharides and on aryl-glycosides suggests that both the -4 and +1 subsites show discrimination against xylose-appended glucosides. The three-dimensional structures of PpXG44 have been solved both in apo-form and as a series of ligand complexes that map the -3 to -1 and +1 to +5 subsites of the extended ligand binding cleft. Complex structures are consistent with partial intolerance of xylosides in the -4' subsites. The atypical specificity of PpXG44 may thus find use in industrial processes involving xyloglucan degradation, such as biomass conversion, or in the emerging exciting applications of defined xyloglucans in food, pharmaceuticals, and cellulose fiber modification.     

Directed evolution of beta -glucosidase A from Paenibacillus polymyxa to thermal resistance

The beta-glucosidase encoded by the bglA gene from Paenibacillus polymyxa has a half-life time of 15 min at 35 degrees C and no detectable activity at 55 degrees C. We have isolated random mutations that enhance the thermoresistance of the enzyme. Following a directed evolution strategy, we have combined some of the isolated mutations to obtain a beta-glucosidase with a half-life of 12 min at 65 degrees C, in the range of resistance of thermophilic enzymes. No significant alteration of the kinetic parameters of the enzyme was observed. One of the mutants isolated in the screening for thermoresistant beta-glucosidase had the same resistance to denaturation as the wild type. This mutation caused the accumulation of enzyme in E. coli, probably due to its lower turnover. The structural changes responsible for the properties of the mutant enzymes have been analyzed. The putative causes increasing thermoresistance are as follows: the formation of an extra salt bridge, the replacement of an Asn residue exposed to the solvent, stabilization of the hydrophobic core, and stabilization of the quaternary structure of the protein.     

Novel (2R,3R)-2,3-butanediol dehydrogenase from potential industrial strain Paenibacillus polymyxa ATCC 12321

A (2R,3R)-2,3-butanediol dehydrogenase (BDH99::67) from Paenibacillus polymyxa ATCC 12321 was functionally characterized. The genetic characteristics of BDH99::67 are completely different from those of meso- and (2S,3S)-2,3-butanediol dehydrogenases. The results showed that BDH99::67 belongs to the medium-chain dehydrogenase/reductase superfamily and not to the short-chain dehydrogenase/reductase superfamily, to which meso- and (2S,3S)-2,3-butanediol dehydrogenases belong.     

Paenibacillus polymyxa,a Jack of all trades

The bacterium Paenibacillus polymyxa is found naturally in diverse niches. Microbiome analyses have revealed enrichment in the genus Paenibacillus in soils under different adverse conditions, which is often accompanied by improved growth conditions for residing plants. Furthermore, Paenibacillus is a member of the core microbiome of several agriculturally important crops, making its close association with plants an interesting research topic. This review covers the versatile interaction possibilities of P. polymyxa with plants and its applicability in industry and agriculture. Thanks to its array of produced compounds and traits, P. polymyxa is likely an efficient plant growth-promoting bacterium, with the potential of biofertilization, biocontrol and protection against abiotic stresses. By contrast, cases of phytotoxicity of P. polymyxa have been described as well, in which growth conditions seem to play a key role. Because of its adjustable character, we propose this bacterial species as an outstanding model for future studies on host–microbe communications and on the manner how the environment can influence these interactions.