Native Cadmium-Metallothionein from the Yeast Saccharomyces cerevisiae: Its Primary Structure and Function in Heavy-Metal Resistance

A Cd-resistant strain of yeast (Saccharomyces cerevisiae, strain30IN) accumulated Cd with the concomitant synthesis of a Cd-bindingprotein of low molecular weight when grown in Cd²⁺-containingmedium. Analysis of the amino acid composition, N-terminal sequenceand immunological properties of the protein revealed its structuralhomology to Cu-metallothionein (Cu-MT) in S. cerevisiae 2186,a Cu-resistant strain of yeast (Winge et al. 1985). The synthesisof MT in Cu-resistant strains of yeast is known to be underthe strict control of Cu²⁺ ions, while that in 301N was inducedboth by Cd²⁺ and Cu²⁺ ions. When 301N was precultured for 48h in the presence of 1 mM CuSO₄, its resistance to Cu²⁺ andthe synthesis of MT in response to Cu²⁺ were enhanced whileanalogous responses to Cd²⁺ were conversely reduced. These resultssuggest that the synthesis of MT is controlled by Cd²⁺ and Cu²⁺in a counteractive manner in strain 301N and, therefore, theregulation of the synthesis of MT plays a role in the adaptationof this strain to conditions when either metal is present. (Received November 1, 1990; Accepted February 22, 1991)     

Physical Characterization of the Chromosomal DNA of the Yeast Saccharomyces exiguus

The number of chromosomes in the yeast Saccharomyces exiguuswas determined to be thirteen by two-dimensional pulsed-fieldgel electrophoresis. The thirteen chromosomes ranged in DNAsize from 520 to 2,600 kbp, with a total length of approximately14 Mbp. Numbers I to XIII were assigned to the chromosomes indecreasing order of DNA length. Southern hybridization analysisusing total DNAs from S. exiguus and S. cerevisiae as probesshowed that there was no significant homology between the chromosomalDNAs of the two species, except in the case of the chromosomalDNA that included rDNA. When rDNA and genes LEU2, TRP1, URA3and HO of S. cerevisiae were used as hybridization probes, itwas apparent that S. exiguus had DNA sequences homologous tothe rDNA and to the LEU2 and HO genes. In S. exiguus, rDNA-likeand LEU2-like DNAs were located on chromosomes I and IX, respectively,and HO-like DNA was located on chromosome VI or VII. (Received May 17, 1993; Accepted July 15, 1993)     

Growth Requirements of San Francisco Sour Dough Yeasts and Bakers' Yeast

The growth requirements of several yeasts isolated from San Francisco sour dough mother sponges were compared with those of bakers' yeast. The sour dough yeasts studied were one strain of Saccharomyces uvarum, one strain of S. inusitatus, and four strains of S. exiguus. S. inusitatus was the only yeast found to have an amino acid requirement, namely, methionine. All of the yeasts had an absolute requirement for pantothenic acid and a partial requirement for biotin. Inositol was stimulatory to all except bakers' yeast. All strains of S. exiguus required niacin and thiamine. Interestingly, S. inusitatus, the only yeast that required methionine, also needed folic acid. For optimal growth of S. exiguus in a molasses medium, supplementation with thiamine was required.     

Relative Importance of Ion Exclusion, Secretion and Accumulation in Spartina alterniflora Loisel.

The extent to which Spartina alterniflora Loisel. excluded,secreted or accumulated the major seawater ions (Cl^-, SO^2-₄,Na⁺, K⁺, Mg²⁺, and Ca²⁺) was investigated under varying salinitytreatments. From a quantitative viewpoint, ion exclusion wasmost prominent and accounted for 91–97% of the theoreticalmaximum ion uptake as a result of transpiration and growth.Of those ions taken up, approximately half was secreted fromthe shoots. Relative to K⁺, a disproportionate amount of Na⁺was excluded at the roots and secreted by the shoots. The concentrationwithin the tissues of S. alterniflora did not change with salinitytreatment for the majority of the ions examined, but Na⁺ wasmore than twice as concentrated at 40 g dm^-3 than at lOgdm^-3.Calculations of the flux of ions from salt marsh sediments tothe flood water via shoot secretion or stem/leaf turnover indicatethat these processes may be important to the ecology of S. alternifloraas mechanisms that limit the accumulation of salt within theroot zone.     

A Short Region from the LEU2 Gene of Saccharomyces cerevisiae Functions as an ARS in the Yeast Saccharomyces exiguus Yp74L-3

We examined the autonomously replicating sequence (ARS) activity of some fragments derived from the LEU2 region of Saccharomyces cerevisiae onto Saccharomyces exiguus Yp74L-3. A DNA fragment functioning as an ARS in S. exiguus, but not in S. cerevisiae, was shown to exist. The ARS activity for S. exiguus was reduced by the 2-μm plasmid origin of S. cerevisiae when both elements coexisted on a single circular plasmid. Analysis of ARS activity with the PCR products from the fragment revealed that the ARS-acting sequence was located in the 3′-terminal area of the transcribed region of the LEU2 gene of S. cerevisiae. It is suggested that the ARS recognition system in S. exiguus is significantly different from that of S. cerevisiae. Received: 16 June 1998 / Accepted: 3 August 1998     

Use of a Disarmed Ri Plasmid Vector in Analysis of Transformed Root Induction

Nicotiana glauca, N. tabacum, Solanian dulcamara and S. nigrumwere transformed by Agrobacteriun rhizogenes strain BN1010 (TL^–TR⁺).The TR-DNA stimulated agropine-positive root induction and wastransformation competent in the absence of the TL-DNA. An unusualpattern of root induction was seen when stem explants were inoculatedwith this strain; occasionally, agropine-positive roots wereinduced at the inoculation sites, but prolific agropine-negativeroots were formed in profusion down the stems. The utility ofBN1010 as an efficient co-integrating vector was demonstratedby the separate transfer of a fragment containing rol ABC (BN1010::pEM15) and of a chimeric nopaline synthase-kanamycin resistancegene (BN1010:: Neo) into plants. Root cultures of S. dulcamaratransformed with BN1010:: Neo had an unusual, positively geotropicphenotype. Strain BN1010:: pEM15 (rol ABC⁺D^–TR⁺) incitedmore roots down stem explants than strain A4T. This indicatesthat rol D may act to suppress agropine-negative root productionin N. glauca and N. tabacum. Key words: Agrobacterium rhizogenes, TL-DNA, TR-DNA, disarmed Ri vector, transformed roots, Nicotiana glauca, N. tabacun, Solatium dulcamara, S. nigrum     

Trans-Kingdom Conjugation Between Agrobacterium tumfaciens and Saccharomyces cerevisiae, a Bacterium and a Yeast

For conjugation between prokaryotic Agrobacterium tumefaciensand eukaryotic Saccharomyces cerevisiae, we constructed twonovel conjugative plasmids. A. tumefaciens transmitted the plasmidsto S. cerevisiae with the aid of tra genes on a helper plasmid.The transmitted plasmids retained their original structure andfunction in transconjugant yeasts. The presence of Ti plasmidbarely affected the trans-kingdom conjugation. ¹A preliminary report of this work was presented in Japaneseby Yoshida et al. (1993).     

The Autonomously Replicating Sequence (ARS) of the Yeast Saccharomyces exiguus Yp74L-3

Fragments containing ARSes were cloned from the genomic DNA of the yeast Saccharomyces exiguus Yp74L-3, and the essential regions for ARSes were restricted for these fragments. Mapping studies of ARS-acting sequences in one of these fragments suggested that S. exiguus recognizes a sequence as an ARS that is different from that recognized by Saccharomyces cerevisiae. Two ARS essential regions of S. exiguus were sequenced, and an ARS core consensus sequence of S. exiguus was deduced to be MATTAMWAWWTK. This sequence differs significantly from that of S. cerevisiae in two positions, suggesting that these nucleotide substitutions cause the difference in the ARS-recognition modes between S. exiguus and S. cerevisiae. Received: 3 August 1998 / Accepted: 18 September 1998     

Molecular Cloning and DNA Analysis of the Orotidine-5′-Phosphate Decarboxylase Gene from the Yeast Saccharomyces exiguus Yp74L-3

The orotidine-5′-phosphate decarboxylase gene of Saccharomyces exiguus Yp74L-3 was cloned as a DNA fragment complementing a ura4 mutation of this yeast. The coding region of the gene is 807 bp in length, and represents 68.7% similarity to the corresponding gene of S. cerevisiae (URA3). The cloned URA4 gene was shown to be located on the 790-kbp Chromosome (chr) VIII of S. exiguus Yp74L-3. The neighbor-joining phylogenetic tree based on the orotidine-5′-phosphate decarboxylase coding sequences indicates that S. exiguus Yp74L-3 is closely related to Kluyveromyces yeasts, as well as to a S. cerevisiae laboratory strain. Received: 4 February 2000 / Accepted: 3 July 2000     

The Correlation between Cd2+ Sensitivity and Cd2+ Uptake in the Strains of Saccharomyces cerevisiae

The sensitivity of twelve strains of Saccharomyces cerevisiaeto Cd²⁺ was examined in correlation with the uptake of Cd²⁺.Strains of S. cerevisiae were grouped into three categoriesdepending on the sensitivity of cells grown on agar-plates containingvarious concentrations of Cd²⁺. 1) The sensitive group did notgrow in 0.1 mM Cd²⁺. 2) The sub-tolerant group was capable ofgrowth at 0.3 min Cd²⁺, but not at 0.4 mM Cd²⁺. 3) The tolerantgroup was capable of growth at 0.4 mM Cd²⁺ or higher. In thesestrain groups the increase in sensitivity to Cd²⁺ was associatedwith an increase in the activity of Cd²⁺ absorption. ¹ This study is dedicated to the late president J. Ashida ofEhime University. (Received November 25, 1982; Accepted February 14, 1983)     

SPHAERIUM CORNEUM (L.) AND PISIDIUM SPP. PFEIFFER -- THE ECOLOGY OF FRESHWATER BIVALVE MOLLUSCS IN RELATION TO WATER CHEMISTRY

Populations of Sphaerium corneum (L.) and Pisidium spp. weresampled monthly for 13 months, at 11 sites with a wide rangeof water chemistry in N.W. England. Both genera showed almostyear-round reproduction, but the periods of maximum productionshowed between-population variation. S. corneum adults containedspat at different stages of development and spat size was relatedto number in the brood. Multiple regression analysis with 16water physicochemical variables showed the following to be highlysignificant factors (P<0.01) in the distribution of the molluses(factors in order of importance):- S. corneum: HCO₃, K^$, Cl^–, Mg^2$, temperature, Ca^2$, month; Pisidium spp: PO₄^3–, Mg^2$, mud, oxygen, temperature, month. (Received 25 January 1978;     

Cytological studies on mitochondria-induced cytoplasmic transformation in yeasts

In Saccharomyces cerevisiae, protoplasts from respiratory-deficient(rho^–) cytoplasmic mutant cells were transformed intorespiratory-sufficient (rho⁺) cells by incubation with mitochondriaprepared from rho⁺ cells in the presence of polyethylene glycoland CaCl₂. Mitochondria prepared from different species, Hansenulawingei and Schizosaccharomyces pombe, also caused the transformationof S. cerevisiae rho^– protoplasts into the rho⁺ cellsas previously reported (14) The obtained transformants wereconfirmed to contain one nucleus and several mitochondrial DNAsby fluorescent staining of DNA. The transformants clearly restoredcytochromes a and b while untransformed recipient cells lackedthe cytochromes. In order to know the mechanism of the transformation,physiological measurement of endocytotic activity of protoplastsand cytological examination of mitochondria-protoplast aggregatesunder the transforming condition were performed. Protoplastshad significant endocytotic activity under this condition. Onthe other hand, fluorescence and electron microscopic observationsindicated that mitochondria forming aggregates with protoplastswere subsequently integrated into recipient protoplasts throughfusion rather than endocytosis. However, the possibility ofendocytosis could not be completely excluded when the low frequencyof the transformation (about 10^–6 to 10^–7) was takeninto account. This is discussed in this paper. A new convenientmethod for measuring endocytosis is also presented. (Received September 27, 1979; )     

Effects of Cytokinin and Several Inorganic Cations on the Polyamine Content of Lettuce Cotyledons

Kinetin (4.7 x 10^–5 M) and 6-benzyladenine (2.22 x 10^–5M) were found to increase ca. 2-fold the putrescine contentin cotyledons of lettuce (Lactuca sativa L.) seedlings grownfor 3 days under fluorescent light. On the other hand, severalinorganic ions (K⁺, Na⁺, Ga⁺⁺, Mg⁺⁺) at a concentration of 3x 10^–2 M reduced the putrescine content. The combinationof kinetin with one of several inorganic ions at the same levelmarkedly increased the spermine content, but the putrescinecontent decreased; calcium and magnesium ions were less effective.The physiological significance of these findings is discussed. (Received July 4, 1982; Accepted November 6, 1982)     

Identification of the Orotidine-5′-Phosphate Decarboxylase Gene and Development of a Transformation System in the Yeast Saccharomyces exiguus Yp74L-3

To investigate the uracil biosynthetic pathway of the yeast Saccharomyces exiguus Yp74L-3, uracil auxotrophic mutants were isolated. Using conventional genetic techniques, four mutant genes concerned in uracil biosynthesis were identified and denoted as ura1, ura2, ura3, and ura4. Mutations in the URA3 and URA4 genes were specifically selected with 5-fluoroorotic acid (5-FOA). Vector plasmids containing the URA3 gene and an autonomously replicating sequence (ARS) of S. cerevisiae produced sufficient amounts of Ura⁺ transformants from the ura4 mutant of S. exiguus. This fact indicates that the S. exiguus URA4 gene encodes orotidine-5′-phosphate decarboxylase (OMP decarboxylase) and demonstrates that vector plasmids for S. cerevisiae are also usable in S. exiguus.     

Potassium, sodium and Chloride in the protoplasm of characeae

Using vacuolar perfusion, which enabled us to replace the cellsap with a solution containing no k⁺, Na⁺ and Cl^–, theconcentrations of these ions in the protoplasm of three speciesof fresh water Characeae were determined. They were respectively,78, 2 and 27 mM in Nitella flexilis, 101, 9 and 31 mM in Nitellapulchella, and 112, 3 and 21 mM in Chara australis. Our previouslyreported results (3) indicating that the chloroplast layer containedmuch more Na⁺ and Cl^– than the endoplasm has been questionedin the light of the present results. ¹Present address: Department of Biology, College of GeneralEducation, Osaka University. (Received September 5, 1973; )     

Functional expression of heterologous proteins in yeast: insights into Ca2+ signaling and Ca2+-transporting ATPases

The baker's yeast Saccharomyces cerevisiae is a well-developed, versatile, and widely used model organism. It offers a compact and fully sequenced genome, tractable genetics, simple and inexpensive culturing conditions, and, importantly, a conservation of basic cellular machinery and signal transducing pathways with higher eukaryotes. In this review, we describe recent technical advances in the heterologous expression of proteins in yeast and illustrate their application to the study of the Ca²⁺ homeostasis machinery, with particular emphasis on Ca²⁺-transporting ATPases. Putative Ca²⁺-ATPases in the newly sequenced genomes of organisms such as parasites, plants, and vertebrates have been investigated by functional complementation of an engineered yeast strain lacking endogenous Ca²⁺ pumps. High-throughput screens of mutant phenotypes to identify side chains critical for ion transport and selectivity have facilitated structure-function analysis, and genomewide approaches may be used to dissect cellular pathways involved in Ca²⁺ transport and trafficking. The utility of the yeast system is demonstrated by rapid advances in the study of the emerging family of Golgi/secretory pathway Ca²⁺,Mn²⁺-ATPases (SPCA). Functional expression of human SPCA1 in yeast has provided insight into the physiology, novel biochemical characteristics, and subcellular localization of this pump. Haploinsufficiency of SPCA1 leads to Hailey-Hailey disease (HDD), a debilitating blistering disorder of the skin. Missense mutations, identified in patients with HHD, may be conveniently assessed in yeast for loss-of-function phenotypes associated with the disease. Saccharomyces cerevisiae; calcium ion; transporters; functional complementation     

Inhibition of Sugar and Salt Elimination by Glands with the Amino Acid Analog p-Fluorophenylalanine

The amino acid analog p-fluorophenylalanine (FPA) inhibitedsugar and K⁺ secretion by nectary glands. FPA specifically reducedthe net excretion of Na⁺ and Cl^– by the salt glands ofthe halophyte Limonium vulgare and ³⁶Cl^–excretion by theglands of the pitcher walls of the carnivorous plant Nepenthes.Net uptake and net accumulation of Na⁺ and Cl^– by Limoniumleaf tissue and ³⁶Cl^– accumulation in Nepenthes pitchertissue were much less inhibited than excretion. The resultsare discussed in relation to literature reporting similar specificeffects of FPA on transport of ions from the symplast of barleyroots into the dead xylem elements. Limonium vulgare, Nepenthes hookeriana, salt-glands, excretion, p-fluorophenylalanine     

Saccharomyces barnetti andSaccharomyces spencerorum: two new species ofSaccharomyces sensu lato (van der Walt)

In the course of a study of DNA base sequence homology, 19 strains labelled asSaccharomyces exiguus, its imperfect state,Candida holmii, orC. milleri were examined. Results confirmed the separation ofC. milleri as a separate species. The remaining strains can be divided into three distinct groups of genomic relatedness. The type cultures ofS. exiguus andC. holmii form a cluster with 10 other strains showing variable reassociation values ranging from 100 to 40%. The remaining four strains comprise two separate species showing no nucleotide relatedness between themselves nor to either theS. exiguus complex or toC. milleri. Physiological analyses demonstrate that it is possible to separate these four taxa on the basis of a few simple tests. The two new species are described respectively asSaccharomyces barnetti honoring James Barnett in recognition of his invaluable work in the field of yeast taxonomy andSaccharomyces spencerorum in honor of J.F.T. and Dorothy M. Spencer who have made innumerable contributions to the genetics and biotechnological application of yeasts.     

Isolation of the ALG6 locus of Saccharomyces cerevisiae required for glucosylation in the N-linked glycosylation pathway

N-Linked protein glycosylation in most eukaryotic cells initiateswith the transfer of the oligosaccharide Glc₃Man₉GlcNAc₂ fromthe lipid carrier dolichyl pyrophosphate to selected asparagineresidues. In the yeast Saccharomyces cerevisiae, alg mutationswhich affect the assembly of the lipid-linked oligosaccharideat the membrane of the endoplasmic reticulum result in the accumulationof lipid-linked oligosaccharide intermediates and a hypoglycosylationof proteins. Exploiting the synthetic growth defect of alg mutationsin combination with mutations affecting oligosaccharyl transferaseactivity (Stagljar et al., 1994), we have isolated the ALG6locus. alg6 mutants accumulate lipid-linked Man₉GlcNAc₂, suggestingthat this locus encodes an endoplasmic glucosyltransferase.Alg6p has sequence similarity to Alg8p, a protein required forglucosylation of Glc₁Man⁹GlcNAc². Saccharomyces cerevisiae endoplasmic reticulum glycosyltransferase dolichol     

Tonoplast Action Potential of Characeae

The plasmalemma action potential was found to be indispensableto the production of the tonoplast action potential. In a solutionlacking Ca²⁺ and containing other divalent cations such as Ba²⁺,Mg²⁺ or Mn²⁺, the plasmalemma excited in Nitella but did notin Chara. In Nitella, however, both the tonoplast action potentialand EC-coupling were abolished due to depletion of Ca²⁺ fromthe external medium. Ca²⁺ ions injected into the cytoplasmiclayer caused a transient change in both plasmalemma and tonoplastpotentials. These results suggest that a transient rise in Ca²⁺concentration during excitation of the plasmalemma may triggerthe tonoplast action potential. (Received February 14, 1986; Accepted August 29, 1986)