A simulation program based on a structured population model for biotechnological yeast processes

Summary A segregated population model for budding yeasts and a simulation program based on it are presented. They enable the study of bioprocesses utilizing yeasts in steady and perturbed conditions and in particular the comparison between the model predictions and the experimental results obtained by flow cytometry, which allows the measurement of segregated parameters of cell populations.Nomenclature a genealogical age - A parameter of the budding law - CV coefficient of variation - F _in(t) volumetric input flow - F _out(t) volumetric output flow - h parameter of the division law - K _s parameter of the Monod's law - m cell mass - M _i discretized cell mass - m _b (a,s) critical mass level for budding - m _p cell mass at the time of budding - n(t) cell number per unit volume - n _p number of sub-populations - n _c number of channels - p (a, i, j, k) discrete density function - Q parameter of the budding law - s(t) substrate concentration - S _in(t) substrate concentration in the input flow - t time - T _m minimal length of the budded phase - V(t) culture volume - x(t) biomass concentration - Y yield coefficient - channel width - (s) specific growth rate - _max parameter of the Monod's law     

The effect of pH on kinetic and yield parameters during the ethanolic fermentation of D-xylose with Pachysolen tannophilus

We have studied the ethanolic fermentation of D-xylose with Pachysolen tannophilus in batch cultures. We propose a model to predict variations in D-xylose consumed, and biomass and ethanol produced, in which we include parameters for the specific growth rate, for the consumption of D-xylose and production of ethanol either related or not to growth.The ideal initial pH for ethanol production turned out to be 4.5. At this pH value the net specific growth rate was 0.26 h^–1, biomass yield was 0.16 g.g^–1, the cell-maintenance coefficient was 0.073 g.g^–1.h^–1, the parameter for ethanol production non-related to growth was 0.064 g.g^–1,h^–1 and the maximum ethanol yield was 0.32 g.g^–1.List of Symbols A _c Carbon atomic weight - a _d1/h Specific cell-maintenance rate defined in Eq. (8) - c Mass fraction of carbon in the biomass - E g/l Ethanol concentration - f _x Correction factor defined in Eq. (13) - f _x Correction factor defined in Eq. (13) - f _xi Correction factor defined in Eq. (14) - k _d1/h Death constant - M _E Ethanol molecular weight - M _s Xylose molecular weight - M _xi Xylitol molecular weight - m g xylose/g biomass Maintenance coefficient for substrate - m _dg xylose/g biomass Maintenance coefficient when k _d - q _Eg ethanol/g biomass. Specific ethanol production rate - s g/l Residual xylose concentration - s ₀ g/l Initial xylose concentration - t h Time - x g/l Biomass concentration - x ₀ g/l Initial biomass concentration - Y _E/sg ethanol/g xylose Instantaneous ethanol yield - ¯Y _E/sg ethanol/g xylose Mean ethanol yield - Y _E ^s/T g ethanol/g xylose Theoretical ethanol yield - Y _E ^s/* g ethanol/g xylose Corrected instantaneous ethanol yield - ¯Y _E ^s/* g ethanol/g xylose Corrected mean ethanol yield - Y _x/sg biomass/g xylose Biomass yield - ¯Y _xi/sg xylitol/g xylose Mean xylitol yield Greek Letters g ethanol/g biomass Growth-associated product formation parameter - g ethanol/g biomass.h Non-growth-associated product formation parameter - _dg ethanol/g biomass.h Non-growth-associated product formation parameter when k _d0 - h Variable defined in Eq. (6) or Eq. (7) - 1/h Specific growth rate - _m1/h Maximum specific growth rate     

A heuristic approach to fed-batch optimisation of streptokinase fermentation

Previous studies have shown that the rate of formation of streptokinase, a secondary metabolite, in batch fermentation is proportional to the specific growth rate of the biomass, which in turn is inhibited by its substrate and the primary product (lactic acid). These kinetics suggest the suitability of fed-batch operation to increase the yield of streptokinase. A near-optimal feed policy has been calculated by the chemotaxis algorithm, and it shows a substrate feed rate decreasing nonlinearly and vanishing after 11 hours. This is followed by batch fermentation for a further 8 hours, at the end of which 12% more streptokinase is generated than by purely batch fermentation. Further improvements in productivity are possible.List of Symbols k _dh^–1 decay constant for active cells - k _ph^–1 decay constant for streptokinase - K _Igl^–1 inhibition constant for lactic acid - K_S gl^–1 inhibition constant for substrate - M gl^–1 lactic acid concentration - P gl^–1 streptokinase concentration - Q 1h^–1 substrate feed rate - S gl^–1 substrate concentration - S _ingl^–1 inlet concentration of substrate - t h time - t _bh end-point of batch fermentation - t _fh end-point of fed-batch fermentation - V l volume of broth in fermenter - V ₀ l initial value of V (at t=0) - V _ml maximum value of V - X gl^–1 total biomass concentration - X _agl^–1 concentration of active biomass - Y _MX yield coefficient for lactic acid from biomass - Y _PX yield coefficient for streptokinase from biomass - Y _XS yield coefficient for biomass from substrate Greek Letters h^–1 specific growth rate of biomass - _mh^–1 maximum specific growth rate     

The oxygen requirements of yeasts for the fermentation of d-xylose and d-glucose to ethanol

Summary The effect of oxygen availability on d-xylose and D-glucose metabolism by Pichia stipitis, Candida shehatae and Pachysolen tannophilus was investigated. Oxygen was not required for fermentation of d-xylose or d-glucose, but stimulated the ethanol production rate from both sugars. Under oxygen-limited conditions, the highest ethanol yield coefficient (Y_e/s) of 0.47 was obtained on d-xylose with. P. stipitis, while under similar conditions C. shehatae fermented d-xylose most rapidly with a specific productivity (q_pmax) of 0.32 h^-1. Both of these yeasts fermented d-xylose better and produced less xylitol than. P. tannophilus. Synthesis of polyols such as xylitol, arabitol, glycerol and ribitol reduced the ethanol yield in some instances and was related to the yeast strain, carbon source and oxygen availability. In general, these yeasts fermented d-glucose more rapidly than d-xylose. By contrast Saccharomyces cerevisiae fermented d-glucose at least three-fold faster under similar conditions.Nomenclature q_pmax maximum specific rate of ethanol production (g ethanol per g dry biomass per hour) - Y_e/s ethanol yield (g ethanol per g substrate utilized) - Y_p/s polyol yield (g polyol per g substrate utilized) - Y_x/s biomass yield (g dry biomass per g substrate utilized) - _max maximum specific growth rate (per hour)     

Continuous and biomass recycle fermentations of Clostridium acetobutylicum

Using experimental data from continuous cultures of Clostridium acetobutylicum with and without biomass recycle, relationships between product formation, growth and energetic parameters were explored, developed and tested. For glucose-limited cultures the maintenance models for, the Y _ATP and biomass yield on glucose, and were found valid, as well as the following relationships between the butanol (Y _B/G) or butyrate (Y _BE/G) yields and the ATP ratio (R _ATP, an energetic parameter), Y _B/G =0.82-1.35 R _ATP, Y _BE/G =0.54 + 1.90 R _ATP. For non-glucose-limited cultures the following correlations were developed, Y _B/G =0.57-1.07 , Y _B/G =0.82-1.35 R _ATPATP and similar equations for the ethanol yield. All these expressions are valid with and without biomass recycle, and independently of glucose feed or residual concentrations, biomass and product concentrations. The practical significance of these expressions is also discussed.List of Symbols D h^–1 dilution rate - m _e mol g^–1 h^–1 maintenance energy coefficient - m _G mol g^–1 h^–1 maintenance energy coefficient - R biomass recycle ratio, (dimensionless) - R _ATP ATP ratio (eqs.(5), (10) and (11)), (dimensionless) - X kg/m³ biomass concentration - Y _ATP g biomass per mol ATP biomass yield on ATP - Y _ATP ^max g biomass per mol ATP maximum Y _ATP - Y _A/G mol acetate produced per mol glucose consumed molar yield of acetate - y _an/g mol acetone produced per mol glucose consumed molar yield of acetone - Y _B/G mol butanol produced per mol glucose consumed molar yield of butanol - y _be/g mol butyrate produced per mol glucose consumed molar yield of butyrate - Y _E/G mol ethanol produced per mol glucose consumed molar yield of ethanol - Y _X/G g biomass per mol glucose consumed biomass yield on glucose - Y _ATP ^max g biomass per mol maximum Y _X/G glucose consumed - h^–1 specific growth rate     

Fundamental aspects of waste sewage sludge treatment: Microbial solids biodegradation in an aerobic thermophilic semi-continuous system

The solubilization and biodegradation of whole microbial cells by an aerobic thermophilic microbial population was investigated over a 72 h period. Various parameters were followed including total suspended solids reduction, changes in the dissolved organic carbon, protein and carbohydrate concentrations, and carboxylic acid production and utilisation. From the rates of removal of the various fractions a simple model for the biodegradation processes is proposed and verified with respect to acetic acid production and utilization, and total suspended solids removal. The process is initiated by enzymic degradation of the substrate microbe cell walls followed by growth on the released soluble substrates at low dissolved oxygen concentration with concommitant carboxylic acid production. Subsequent utilization of the unbranched, lower molecular weight carboxylic acids allows additional energy supply following exhaustion of the easily utilisable soluble substrate from microbial cell hydrolysis.List of Symbols Y _Xp/Xs kg/kg yield process microbes on substrate yeast cells - Y _Xp/Ac kg/kg yield process microbes on acetate - Y _Ac/Ss kg/kg yield acetate produced by process microbes growing on substrate yeast cells - Y _Ss/Xs kg/kg yield soluble substrate from lysis of yeast cells - Y _Ss/Xp kg/kg yield soluble substrate from lysis of process microbes - Y _P/Xs kg/kg yield particulates from lysis of yeast cells - Y _P/Xp kg/kg yield particulates from lysis of process microbes - _{max (Ss)} h^–1 maximum specific growth rate constant for growth of process microbes on soluble substrate - _{max (Ac)} h^–1 maximum specific growth rate constant for growth of process microbes on acetate - Ks _Ss kg/m³ saturation coefficient for growth of process microbes on soluble substrate - Ks _Ac kg/m³ saturation coefficient for growth of process microbes on acetate - K _d h^–1 death/lysis rate constant for process microbes - K _i kg/m³ inhibition constant for growth of process microbes on acetate - K _L h^–1 lysis rate constant for whole yeast cells - K _h h^–1 hydrolysis rate constant for particulate biomass     

Protein production from whey usingPenicillium cyclopium; growth parameters and cellular composition

Summary The growth parameters ofPenicillium cyclopium have been evaluated in a continuous culture system for the production of fungal protein from whey. Dilution rates varied from 0.05 to 0.20 h^–1 under constant conditions of temperature (28°C) and pH (3.5). The saturation coefficients in the Monod equation were 0.74 g l^–1 for lactose and 0.14 mg l^–1 for oxygen, respectively. For a wide range of dilution rates, the yield was 0.68 g g^–1 biomass per lactose and the maintenance coefficient 0.005 g g^–1 h^–1 lactose per biomass, respectively. The maximum biomass productivity achieved was 2 g l^–1 h^–1 biomass at dilution rates of 0.16–0.17 h^–1 with a lactose concentration of 20 g l^–1 in the feed. The crude protein and total nucleic acid contents increased with a dilution rate, crude protein content varied from 43% to 54% and total nucleic acids from 6 to 9% in the range of dilution rates from 0.05 to 0.2 h^–1, while the Lowry protein content was almost constant at approximately 37.5% of dry matter.Nomenclature (mg l^–1) C_o initial concentration of dissolved oxygen - (h^–1) D dilution rate - (mg l^–1) K₀₂ saturation coefficient for oxygen - (g l^–1) K_s saturation coefficient for substrate - (g g^–1 h^–1) lactose per biomass) m maintenance energy coefficient - (mM g^–1 h^–1O₂ per biomass) Q₀₂ specific oxygen uptake rate - (g l^–1) S residual substrate concentration at steady state - (g l^–1) S_o initial substrate concentration in feed - (min) t_1/2 time when C_o is equal to C_o/2 - (g l^–1) X biomass concentration - (g l^–1) X biomass concentration at steady state - (g g^–1 biomass per lactose) Y_G yield coefficient for cell growth - (g g^–1 biomass per lactose) Y_x/s overall yield coefficient - (h^–1) specific growth rate     

Dependency of growth yield,maintenance and K s-values on the dissolved oxygen concentration in continuous cultures of Azotobacter vinelandii

Azotobacter vinelandii was grown diazotrophically in sucrose-limited chemostat cultures at either 12, 48, 108, 144 or 192 M dissolved oxygen. Steady state protein levels and growth yield coefficients (Y) on sucrose increased with increasing dilution rate (D). Specific rate of sucrose consumption (q) increased in direct proportion to D. Maintenance coefficients (m) extrapolated from plots of q versus D, as well as from plots of 1/Y versus 1/D exhibited a nonlinear relationship to the dissolved oxygen concentration. Constant maximal theoretical growth yield coefficients (Y ^G) of 77.7 g cells per mol of sucrose consumed were extrapolated irrespective of differences in ambient oxygen concentration. For comparison, glucose-, as well as acetate-limited cultures were grown at 108 M oxygen. Fairly identical m- and Y ^G-values, when based on mol of substrate-carbon with glucose and sucrose grown cells, indicated that both substrates were used with the same efficiency. However, acetate-limited cultures showed significantly lower m- and, at comparable, D, higher Y-values than cultures limited by either sucrose or glucose. Substrate concentrations (K _s) required for half-maximal growth rates on sucrose were not constant, they increased when the ambient oxygen concentration was raised and, at a given oxygen concentration, when D was decreased. Since biomass levels varied in linear proportion to K _s these results are interpreted in terms of variable substrate uptake activity of the culture.Abbreviations D dilution rate - K _s substrate concentration required for half maximal growth rate - m maintenance coefficient - q specific rate of substrate consumption - Y growth yield coefficient - Y ^G maximum theoretical growth yield coefficient     

Ethanol fermentation using a glucose negative mutant ofZymomonas mobilis

Summary The fermentation of an equimolar mixture of glucose and fructose into ethanol and sorbitol by a glucose negative mutant ofZymomonas mobilis was monitored. The results were analyzed using a recently described method based on polynomial fitting and calculation of intantaneous and overall parameters. These parameters described well the physiology of this mixed-substrate mixed-product fermentation. Growth of the mutant was greatly inhibited on this medium. Fructose was quantitatively converted into sorbitol while glucose was oxidized into gluconic acid .This latter product was utilized as substrate for cell growth and ethanol production.Nomenclature X biomass concentration, g/l - S total sugar concentration, g/l - Glu glucose concentration, g/l - Fru fructose concentration, g/l - Sor sorbitol concentration, g/l - P ethanol concentration, g/l - t fermentation time, h - specific growth rate, h^-1 - q_s specific sugar uptake rate, g/g.h - q_G specific glucose uptake rate, g/g.h - q_F specific fructose uptake rate, g/g.h - q_P specific ethanol productivity, g/g.h - q_Sor specific sorbitol productivity, g/g.h - Y_X/S biomass yield on total sugar, g/g - Y_P/S ethanol yield on total sugar, g/g - Y_Sor/S sorbitol yield on total sugar, g/g - y_Sor/f sorbitol yield on fructose, g/g - Y_P/G ethanol yield on glucose, g/g     

Modelling of alcohol fermentation in a tubular reactor with high biomass recycle

Fermentation in tubular recycle reactors with high biomass concentrations is a way to boost productivity in alcohol production. A computer model has been developed to investigate the potential as well as to establish the limits of this process from a chemical engineering point of view. The model takes into account the kinetics of the reaction, the nonideality of flow and the segregation in the bioreactor. In accordance with literature, it is shown that tubular reactors with biomass recycle can improve productivity of alcohol fermentation substantially.With the help of the computer based reactor model it was also possible to estimate the detrimental effects of cell damage due to pumping. These effects are shown to play a major role, if the biomass separation is performed by filtration units which need high flow rates, e.g. tangential flow filters.List of Symbols Bo d Bodenstein number - c kg/m³ concentration of any component - CPFR continuous plug flow reactor - CSTR continuous stirred tank reactor - d _h m hydraulic diameter - D _eff m²/s dispersion coefficient - f residence time distribution function - K _s kg/m³ monod constant for biomass production - K _s kg/m³ monod constant for alcohol production - p kg/m³ product concentration - P _i kg/m³ lower inhibition limit concentration for biomass production - p _i kg/m³ lower inhibition limit concentration for alcohol production - p _m kg/m³ maximum inhibition limit concentration for biomass production - p _m kg/m³ maximum inhibition limit concentration for alcohol production - q _p h^–1 specific production rate - q _p,max h^–1 maximum specific production rate for alcohol production - q _s h^–1 specific substrate consumption rate - Q _L m _gas ³ /m³h specific gas rate - r _p , r _s , r _x kg/(m³ · h) reaction rate for ethanol production substrate consumption and cell growth, respectively - S _F kg/m³ substrate concentration in feed stream - s kg/m³ substrate concentration - t h time - x kg/m³ biomass concentration - x _max kg/m³ maximum biomass concentration for biomass production - Y _p/s yield coefficient - h^–1 specific growth rate - _max h^–1 maximum specific growth rate - dimensionless time (t/) - h mean residence time - _s glucose conversion     

Effect of dilution rate on the release of pertussis toxin and lipopolysaccharide ofBordetella pertussis

Summary The kinetics ofBordetella pertussis growth was studied in a glutamate-limited continuous culture. Growth kinetics corresponded to Monod's model. The saturation constant and maximum specific growth rate were estimated as well as the energetic parameters, theoretical yield of cells and maintenance coefficient. Release of pertussis toxin (PT) and lipopolysaccharide (LPS) were growth-associated. In addition, they showed a linear relationship between them. Growth rate affected neither outer membrane proteins nor the cell-bound LPS pattern.Nomenclature X cell concentration (g L^–1) - specific growth rate (h^–1) - _m maximum specific growth rate (h^–1) - D dilution rate (h^–1) - S concentration of growth rate-limiting nutrient (glutamate) (mmol L^–1 or g L^–1) - Ks substrate saturation constant (mol L^–1) - m_s maintenance coefficient (g g^–1 h^–1) - Y_x/s theoretical yield of cells from glutamate (g g^–1) - Y_x/s yield of cells from glutamate (g g^–1) - Y_PT/s yield of soluble PT from glutamate (mg g^–1) - Y_KDO/s yield of cell-free KDO from glutamate (g g^–1) - Y_PT/x specific yield of soluble PT (mg g^–1) - Y_KDO/x specific yield of cell-free KDO (g g^–1) - q_PT specific soluble PT production rate (mg g^–1 h^–1) - q_KDO specific cell-free KDO production rate (g g^–1 h^–1)     

Batch xylitol production by<Emphasis Type="Italic"> Candida guilliermondii</Emphasis> FTI 20037 from sugarcane bagasse hemicellulosic hydrolyzate at controlled pH values

Batch fermentation of sugarcane bagasse hemicellulosic hydrolyzate by the yeast Candida guilliermondii FTI 20037 was performed using controlled pH values (3.5, 5.5, 7.5). The maximum values of xylitol volumetric productivity (Q _p=0.76 g/l h) and xylose volumetric consumption (Q _s=1.19 g/l h) were attained at pH 5.5. At pH 3.5 and 7.5 the Q _p value decreased by 66 and 72%, respectively. Independently of the pH value, Y _x/s decreased with the increase in Y _p/s suggesting that the xylitol bioconversion improves when the cellular growth is limited. At the highest pH value (7.5), the maximum specific xylitol production value was the lowest (q _pmax=0.085 g/l h.), indicating that the xylose metabolism of the yeast was diverted from xylitol formation to cell growth.List of symbols P _max xylitol concentration (g/l) - Q _x volumetric cell production rate (g/l h) - Q _s volumetric xylose uptake rate (g/l h) - Q _p volumetric xylitol production rate (g/l h) - q _pmax specific xylitol production (g/g h) - q _smax specific xylose uptake rate (g/g h) - _max specific cell growth rate (h^–1) - Y _p/s xylitol yield coefficient, g xylitol per g xylose consumed (g/g) - Y _p/x xylitol yield coefficient, g xylitol per g dry cell mass produced (g/g) - Y _x/s cell yield coefficient, g dry cell mass per g xylose consumed (g/g) - _cell percentage of the cell yield from the theoretical value (%) - _xylitol percentage of xylitol yield from the theoretical value (%)     

Influence of the ratio of the initial substrate concentration to biomass concentration on the performance of a sequencing batch reactor

Biomass behaviour and COD removal in a benchscale activated sludge reactor have been studied alternating anaerobic and aerobic conditions. Particular attention has been paid to the influence of the ratio of the initial substrate concentration (S ₀) to the initial biomass concentration (X ₀) on the reactor performance. Tests at very low ratios (S ₀/X ₀<2) demonstrate the existence of a threshold below which the reactor performance is seriously affected (S ₀/X ₀=0.5). Under conditions of total suppression of cell duplication, substrate maintenance requirements have also been calculated for the microbial consortium present in the activated sludges. The results obtained show that stressed biomass can survive conditions of substrate lack better than unstressed biomass.List of Symbols b h^–1 specific death rate - COD g/l chemical oxygen demand - DO g/l dissolved oxygen concentration - K _s g/l Monod saturation constant - MLSS g/l mixed liquor suspended solid concentration - P g/l phosphorus concentration - S g/l substrate concentration - S ₀ g/l initial substrate concentration - SS g/l suspended solid concentration - t h time - X g/l biomass concentration - X ₀ g/l initial biomass concentration - Y _SX g/g yield of growth on substrate - _max h^–1 maximum specific growth rate     

Performance,kinetics, and substrate utilization in a continuous yeast fermentation with cell recycle by ultrafiltration membranes

Summary A continuous single stage yeast fermentation with cell recycle by ultrafiltration membranes was operated at various recycle ratios. Cell concentration was increased 10.6 times, and ethanol concentration and fermentor productivity both 5.3 times with 97% recycle as compared to no recycle. Both specific growth rate and specific ethanol productivity followed the exponential ethanol inhibition form (specific productivity was constant up to 37.5 g/l of ethanol before decreasing), similar to that obtained without recycle, but with greater inhibition constants most likely due to toxins retained in the system at hight recycle ratios.By analyzing steady state data, the fractions of substrate used for cell growth, ethanol formation, and what which were wasted were accounted for. Yeast metabolism varied from mostly aerobic at low recycle ratios to mostly anaerobic at high recycle ratios at a constant dissolved oxygen concentration of 0.8 mg/kg. By increasing the cell recycle ratio, wasted substrate was reduced. When applied to ethanol fermentation, the familiar terminology of substrate used for Maintenance must be used with caution: it is not the same as the wasted substrate reported here.A general method for determining the best recycle ratio is presented; a balance among fermentor productivity, specific productivity, and wasted substrate needs to be made in recycle systems to approach an optimal design.Nomenclature B Bleed flow rate, l/h - C _T Concentration of toxins, arbitrary units - D Dilution rate, h^-1 - F Filtrate or permeate flow rate, removed from system, l/h - F _o Total feed flow rate to system, l/h - K _s Monod form constant, g/l - P Product (ethanol) concentration, g/l - P _o Ethanol concentration in feed, g/l - PP} Adjusted product concentration, g/l - PD Fermentor productivity, g/l-h - R Recycle ratio, F/F _o - S Substrate concentration in fermentor, g/l - S _o Substrate concentration in feed, g/l - V Working volume of fermentor, l - V _MB Viability based on methylene blue test - X Cell concentration, g dry cell/l - X _o Cell concentration in feed, g/l - Y _ATP Cellular yield from ATP, g cells/mol ATP - Y _ATPS Yield of ATP from substrate, mole ATP/mole glucose - Y _G True growth yield or maximum yield of cells from substrate, g cell/g glucose - Y _P Maximum theoretical yield of ethanol from glucose, 0.511 g ethanol/g glucose - Y _P/S Experimental yield of product from substrate, g ethanol/g glucose - Y _x/s Experimental yield of cells from substrate, g cell/g glucose - S _NP/X Non-product associated substrate utilization, g glucose/g cell - k ₁, k₂, k₃, k₄ Constants - k ₁ ^APP , k ₂ ^APP Apparent k ₁, k₃ - k ₁ ^TRUE True k ₁ - m Maintenance coefficient, g glucose/g cell-h - m ^* Coefficient of substrate not used for growth nor for ethanol formation, g glucose/g cell-h - Specific growth rate, g cells/g cells-h, reported as h^-1 - _m Maximum specific growth rate, h^-1 - v Specific productivity, g ethanol/g cell-h, reported as h^-1 - v _m Maximum specific productivity, h^-1     

Regulation of intracellular H+ balance in Zymomonas mobilis 113 during the shift from anaerobic to aerobic conditions

Summary The energetics, enzyme activities and end-product synthesis of Zymomonas mobilis 113 in continuous culture were studied after the shift from an anaerobic to an aerobic environment. Aeration diminished ethanol yield and lactic acid concentration, but increased glucose consumption rate and production of acetic acid. After the shift to aerobic conditions reduced nicotinamide adenine dinucleotide (phosphate) [NAD(P)H]-oxidase activity was stimulated. Washed cell suspensions consumed oxygen with glucose, lactate and ethanol as substrates. The aerobic Z. mobilis 113 regulated their intracellular redox balance by production and reoxidation of the end products, coupled with the formation of NAD(P)H. An increase in transmembrane pH gradient (pH) and a decrease in intracellular ATP concentration were observed after the shift to aerobic conditions. At low medium redox potential (Eh) values the H⁺ balance was regulated in an energy-independent way via end-product excretion. Under aerobic conditions this was supplemented by ATP-dependent H⁺ excretion by the membrane H⁺-ATPase.Abbreviations D dilution rate (h^-1) - S ₀ initial glucose concentration (g/l) - Y _x/s growth yield (g/mol) - Y _p/s product yield (g/g) - q _s specific rate of substrate utilization (g/g per hour) - q _p specific rate of ethanol formation (g/g per hour) - qo ₂ specific rate of CO₂ production (mmol/g per hour) - specific growth rate (h^-1) - X dry biomass concentration (g/l) - Eh redox potential of culture medium (mV) - pH transmembrane pH gradient (pH units) - pH_in intracellular pH - SASE sum of activities of specific enmymes of Entner-Doudoroff pathway     

Xylitol formation by Candida boidinii in oxygen limited chemostat culture

Summary Production of xylitol by Candida boidinii NRRL Y-17213 occurs under conditions of an oxygen limitation. The extent to which substrate is converted to xylitol and its coproducts (ethanol, other polyols, acetic acid), and the relative flow rates of substrate to energetic and biosynthetic pathways is controlled by the degree of oxygen limitation.With decrease in oxygen concentration in the inlet gas, for a constant dilution rate of 0.05 1/h. the specific oxygen uptake rate decreased from 1.30 to 0.36 mmol/gh Xylitol was not produced at specific oxygen uptake rates above 0.91 mmol/gh. Upon shift to lower oxygen rates, specific xylitol production rate increased more rapidly than specific ethanol production rate:Nomenclature D dilution rate (1/h) - DOT dissolved oxygen tension (%) - m_o2 maintenance coefficient (mmol O₂/g cell mass h) - q_o2 specific oxygen uptake rate (mmol O₂/g cell mass h) - q_s specific xylose uptake rate (g xylose/g cell mass h) or (mmol xylose/g cell mass h) - q_x specific xylitol production rate (g xylitol/ g cell mass h) or (mmol xylitol/ g cell mass h) - q_e specific ethanol production rate (g ethanol/ g cell mass h) or (mmol ethanol/ g cell mass h) - q_CO2 specific carbon dioxide production rate (mmol CO₂/g cell mass h) - S xylose concentration (g/1) - Y_cm/s cell mass yield coefficient, (g cell mass/mmol xylose) or (g cell mass/ g xylose consumed) - Y_cm/O2 cell mass yield coefficient, (g cell mass/mmol O₂) - Y_X/S xylitol yield coefficient (g xylitol/g xylose consumed) - Y_x/O2 xylitol yield coefficient (g xylitol/mmol O₂) - Y_e/s ethanol yield coefficient (g ethanol/g xylose consumed) - OUR oxygen uptake rate (mmol O₂/1h) - specific growth rate (1/h)     

Fermentation ofd-xylose,d-glucose andl-arabinose mixture byPichia stipitis Y 7124: sugar tolerance

Summary The effect of substrate concentration (S ₀) on the fermentation parameters of a sugar mixture byPichia stipitis Y 7124 was investigated under anaerobic and microaerobic conditions. Under microaerobiosisP. stipitis maintained high ethanol yield and productivity when initial substrate concentration did not exceed 150 g/l; ethanol yield of about 0.40 g/g and volumetric productivity up to 0.39 g/l per hour were obtained. Optimal specific ethanol productivity (0.2 g/g per hour) was observed withS ₀=110 g/l. Under anaerobic conditionsP. stipitis exhibited the highest fermentative performances atS ₀=20 g/l; it produced ethanol with a yield of 0.42 g/g, with a specific rate of 1.1 g/g per day. When the initial substrate level increased, specific ethanol productivity declined gradually and ethanol yield was dependent on the degree of utilization of each sugar in the mixture.Abbreviations E _m maximum produced ethanol (g/l) - E ₀ initial ethanol (g/l) - E _v evaporated ethanol (g/l) - Q _p volumetric productivity of ethanol (g ethanol/l per hour or g/l per day) - q _p specific productivity of ethanol (g ethanol/g cells per hour) - q _pm maximum specific productivity of ethanol (g/l per hour) - S ₀ initial substrate concentration (g/l) - t _f time at which produced ethanol is maximum (h) - Y _p/s ethanol yield (g ethanol produced/g substrate utilized) - Y _x/s cell yeild (g cells produced/g substrate utilized) - Y _xo/xy xylitol yield (g xylitol produced/g xylose utilized) - probability coefficient - specific growth rate coefficient (h^-1 or d^-1)     

Fed-batch production of baker's yeast using millet (Pennisetum typhoides) flour hydrolysate as the carbon source

A fermentation medium based on millet (Pennisetum typhoides) flour hydrolysate and a four-phase feeding strategy for fed-batch production of baker's yeast,Saccharomyces cerevisiae, are presented. Millet flour was prepared by dry-milling and sieving of whole grain. A 25% (w/v) flour mash was liquefied with a thermostable 1,4--d-glucanohydrolase (EC 3.2.1.1) in the presence of 100 ppm Ca²⁺, at 80°C, pH 6.1–6.3, for 1 h. The liquefied mash was saccharified with 1,4--d-glucan glucohydrolase (EC 3.2.1.3) at 55°C, pH 5.5, for 2 h. An average of 75% of the flour was hydrolysed and about 82% of the hydrolysate was glucose. The feeding profile, which was based on a model with desired specific growth rate range of 0.18–0.23 h^–1, biomass yield coefficient of 0.5 g g^–1 and feed substrate concentration of 200 g L^–1, was implemented manually using the millet flour hydrolysate in test experiments and glucose feed in control experiments. The fermentation off-gas was analyzed on-line by mass spectrometry for the calculation of carbon dioxide production rate, oxygen up-take rate and the respiratory quotient. Off-line determination of biomass, ethanol and glucose were done, respectively, by dry weight, gas chromatography and spectrophotometry. Cell mass concentrations of 49.9–51.9 g L^–1 were achieved in all experiments within 27 h of which the last 15 h were in the fedbatch mode. The average biomass yields for the millet flour and glucose media were 0.48 and 0.49 g g^–1, respectively. No significant differences were observed between the dough-leavening activities of the products of the test and the control media and a commercial preparation of instant active dry yeast. Millet flour hydrolysate was established to be a satisfactory low cost replacement for glucose in the production of baking quality yeast.Nomenclature C _ox Dissolved oxygen concentration (mg L^–1) - CPR Carbon dioxide production rate (mmol h^–1) - C _s0 Glucose concentration in the feed (g L^–1) - C _s Substrate concentration in the fermenter (g L^–1) - C _s.crit Critical substrate concentration (g L^–1) - E Ethanol concentration (g L^–1) - F _s Substrate flow rate (g h^–1) - i Sample number (–) - K _e Constant in Equation 6 (g L^–1) - K _o Constant in Equation 7 (mg L^–1) - K _s Constant in Equation 5 (g L^–1) - m Specific maintenance term (h^–1) - OUR Oxygen up-take rate (mmol h^–1) - q _ox Specific oxygen up-take rate (h^–1) - q _ox.max Maximum specific oxygen up-take rate (h^–1) - q _p Specific product formation rate (h^–1) - q _s Specific substrate up-take rate (g g^–1 h^–1) - q _s.max Maximum specific substrate up-take rate (g g^–1 h^–1) - RQ Respiratory quotient (–) - S Total substrate in the fermenter at timet (g) - S ₀ Substrate mass fraction in the feed (g g^–1) - t Fermentation time (h) - V Instantaneous volume of the broth in the fermenter (L) - V ₀ Starting volume in the fermenter (L) - V _si Volume of samplei (L) - x Biomass concentration in the fermenter (g L^–1) - X ₀ Total amount of initial biomass (g) - X _t Total amount of biomass at timet (g) - Y _p/s Product yield coefficient on substrate (–) - Y _x/e Biomass yield coefficient on ethanol (–) - Y _x/s Biomass yield coefficient on substrate (–) Greek letters Moles of carbon per mole of yeast (–) - Moles of hydrogen atom per mole of yeast (–) - Moles of oxygen atom per mole of yeast (–) - Moles of nitrogen atom per mole of yeast (–) - Specific growth rate (h^–1) - _crit Critical specific growth rate (h^–1) - _E Specific ethanol up-take rate (h^–1) - _max.E Maximum specific ethanol up-take rate (h^–1)     

Xylitol production from D-xylose byCandida guillermondii: Fermentation behaviour

Summary The ability ofCandida guillermondii to produce xylitol from xylose and to ferment individual non xylose hemicellulosic derived sugars was investigated in microaerobic conditions. Xylose was converted into xylitol with a yield of 0,63 g/g and ethanol was produced in negligible amounts. The strain did not convert glucose, mannose and galactose into their corresponding polyols but only into ethanol and cell mass. By contrast, fermentation of arabinose lead to the formation of arabitol. On D-xylose medium,Candida guillermondii exhibited high yield and rate of xylitol production when the initial sugar concentration exceeded 110 g/l. A final xylitol concentration of 221 g/l was obtained from 300 g/l D-xylose with a yield of 82,6% of theoretical and an average specific rate of 0,19 g/g.h.Nomenclature Q_p average volumetric productivity of xylitol (g xylitol/l per hour) - q_p average specific productivity of xylitol (g xylitol/g of cells per hour) - So initial xylose concentration (g/l) - tf incubation time (hours) - Y_P/S xylitol yield (g of xylitol produced/g of xylose utilized) - Y_E/S ethanol yield (g of ethanol produced/g of substrate utilized) - Y_X/S cells yield (g of cells/g of substrate utilized) - specific growth rate coefficient (h^–1) - _max maximum specific growth rate coefficient (h^–1)     

Comments on the “Maintenance coefficient” changes during alcohol fermentation

Summary The concept of maintenance is discussed in terms of the biological meaning and the applicability of the maintenance coefficient, m, in bioengineering for optimization of yields in fermentation. A method of calculation is proposed for the evaluation of m in the course of fermentation in the case of a metabolite (e.g, ethanol). During alcoholic fermentation m is not constant and decreases with the growth rate.The phenomena involved in maintenance are numerous and complex and there is a semantic problem in its definition which can be generalized by the apparently non-finalized substrate consumption.Nomenclature a specific maintenance rate (defined by eq. (9)) - m maintenance coefficient - X cell mass concentration (as a dry weight) - S substrate concentration - P product concentration - r rate of reaction - r_x,r_s,r_p rate of reaction related to biomass, substrate and product - r_sm,r_sg,r_spi rate of reaction related only to the consumption by maintenance, growth and the synthesis of the ith product - r_xe maintenance rate defined by eq. (10) - q_s,q_Pi specific rate of substrate consumption and i^th product production - Y yield coefficient - Y^o, Y^o apparent yield coefficient related to the cell and i^th product - Y _xs ^xs , Y _Pis ^Pis maximum theoretical yield coefficient related to the cell and i^th - specific growth rate produce 420