The 1H-NMR Features of Natural Taxane Diterpenoid Compounds

The paper reports the IH-NMR features of natural taxane diterpenoids with different skeleton types on the basis of the systematic analysis of their 1H-NMR data. According to the characteristics of 1H-NMR of taxane diterpenoids it proved possible to differentiate unevocally 6/8/6 membered ring and 5/7/6 membered ring systems.     

The effects of habitat fragmentation via forestry plantation establishment on spatial genotypic structure in the small marsupial carnivore, Antechinus agilis

Dispersal is an important influence on species' distributions, patch colonization and population persistence in fragmented habitat. We studied the impacts of habitat fragmentation resulting from establishment of an exotic pine plantation on dispersal of the marsupial carnivore, Antechinus agilis. We applied spatial analyses of individual multilocus microsatellite genotypes and mitochondrial haplotypes to study patterns of gene flow in fragmented habitat and natural habitat 'control' areas, and how this is affected by the spatial dispersion of habitat patches, the presence of corridors and a 'mainland' source of migrants. Spatial analysis of molecular variance and partial Mantel tests confirmed the absence of cryptic barriers to gene flow in continuous habitat, which if present would confound the comparison of genetic structures in fragmented vs. unfragmented habitats. Spatial genotypic structure suggested that although dispersal was male-biased in both habitat types, fragmentation restricted dispersal of males more than that of females and the degree of restriction of male dispersal was dependent on the geographical isolation of the patch. The scale of positive genotypic structure in fragmented habitat was restricted to the two closest patches for females and the three closest patches for males. Our results provide evidence for significantly increased gene flow through habitat corridors relative to that across the matrix and for significantly lower gene flow between 'mainland' unfragmented habitat and habitat patches relative to that within either habitat type, suggesting a behavioural barrier to crossing habitat interfaces.     

黑龙江省完达山地区马鹿生境破碎化及其影响因子

应用景观生态学原理和地理信息系统技术,分析黑龙江省完达山地区马鹿生境相关因子重要性、对景观连接度进行模糊相对赋值,建立了景观连接度评价模型及景观斑块指数,研究了黑龙江省完达山地区关于马鹿生境的景观连接度水平、生境的适宜性以及景观的空间结构。结果表明:(1)在155.6km2的面积中,适宜地区的总面积仅为14.81km2,占研究地区的9.52%;次适宜地区的总面积为9.57km2,占研究地区的6.15%;一般适宜地区的总面积为130.05km2,占研究地区的83.58%;不适宜地区的总面积为1.17km2,占研究地区的0.75%;(2)研究地区马鹿各类适宜地区呈多个斑块且相互隔离,在空间分布上处于破碎状态,而且不适宜地区斑块(人为活动景观)的面积比例虽小,在生态系统中形态上的破碎化程度较小,但对马鹿的生境的生态功能的丧失起到重要作用。     

The extent of lead fragmentation observed in deer culled by sharpshooting

Sharpshooting is a proven management technique to lower white-tailed deer (Odocoileus virginianus) densities in areas where hunting is precluded. A donation program that allows for the consumptive use of these culled deer is often necessary to gain public approval for such a program. We culled 40 deer in Indiana using sharpshooting methods (head and neck shot placement) and radiographed the carcasses to determine if lead fragmentation spread throughout the skeletal muscle system. In 30 deer where shot placement was between the cranium and fourth cervical vertebrae, we observed no lead fragments in any thoracic or crural muscle tissue. Of 10 deer where shot placement was between the fifth and seventh cervical vertebrae, 8 deer experienced lead fragments in the extensor spinae muscle. Deer culled with highly frangible bullets via sharpshooting in the cranium or upper cervical spine have minimal risk of experiencing lead fragmentation in the thoracic or crural muscle systems. Deer shot in the lower neck may experience lead fragmentation in the anterior extensor spinae muscle, and up to 40 cm of that muscle should be removed before consumption. © 2011 The Wildlife Society.     

城市景观破碎化格局与城市化及社会经济发展水平的关系——以北京城区为例

快速城市化引发的景观破碎化加剧对于城市生态系统的过程、功能及其所提供的生态服务功能具有显著的影响。以北京市五环内中心城区为例,采用移动窗口分析、梯度分析与景观指数相结合的方法研究了城市景观破碎化的空间分布格局和内部水平差异,并以此为基础,探究景观破碎化与城市化及社会经济发展水平的关系。结果表明:类型水平上,城市建筑用地景观比例达63%,斑块连通性好,破碎化程度低,而绿地景观占33%,斑块分布不均匀,破碎化程度较高。景观水平上,城市中心和郊区的景观破碎化程度要明显低于城市边缘的城乡过渡区,沿城市化梯度从中心向外围呈现出先上升后下降的趋势。回归分析结果表明,景观破碎化程度与城市化水平之间表现出一种倒"U"型关系,并在城市化水平达42%—45%之间,景观破碎化程度达到峰值。进一步研究表明,人口密度和家庭户数是导致景观破碎化加剧的直接驱动因素,而经济的快速增长对景观破碎化程度的提高具有间接的影响。该研究结果不仅能作为城市生态系统监测的重要指标,还能为城市景观的合理规划提供科学依据,而且对于促进城市的可持续发展具有重要的意义。     

The influence of forest fragmentation and landscape pattern on American martens

1. We investigated the effects of forest fragmentation on American martens ( Martes americana Rhoads) by evaluating differences in marten capture rates (excluding recaptures) in 18 study sites with different levels of fragmentation resulting from timber harvest clearcuts and natural openings. We focused on low levels of fragmentation, where forest connectivity was maintained and non-forest cover ranged from 2% to 42%.
2. Martens appeared to respond negatively to low levels of habitat fragmentation, based on the significant decrease in capture rates within the series of increasingly fragmented landscapes. Martens were nearly absent from landscapes having > 25% non-forest cover, even though forest connectivity was still present.
3. Marten capture rates were negatively correlated with increasing proximity of open areas and increasing extent of high-contrast edges. Forested landscapes appeared unsuitable for martens when the average nearest-neighbour distance between open (non-forested) patches was <100 m. In these landscapes, the proximity of open areas created strips of forest edge and eliminated nearly all forest interior.
4. Small mammal densities were significantly higher in clearcuts than in forests, but marten captures were not correlated with prey abundance or biomass associated with clearcuts.
5. Conservation efforts for the marten must consider not only the structural aspects of mature forests, but the landscape pattern in which the forest occurs. We recommend that the combination of timber harvests and natural openings comprise <25% of landscapes ≥9 km² in size.
6. The spatial pattern of open areas is important as well, because small, dispersed openings result in less forest interior habitat than one large opening at the same percentage of fragmentation. Progressive cutting from a single patch would retain the largest amount of interior forest habitat.     

黄河流域景观破碎化时空特征及其成因探测

黄河流域快速的人口增长和城市扩张加剧了土地利用转型和生态景观破碎化,引发了诸如生态系统功能退化、生物多样性功能减弱以及生境破碎化等一系列严重问题。探明黄河流域景观破碎化时空特征及其成因对维护流域生态系统稳定和生态修复具有重要指导意义。但是以往研究缺乏对黄河流域景观破碎化时空特征及其归因分析的相关研究,难以为黄河流域生态环境治理以及景观格局优化提供科学指导。基于FRAGSTATS4.2软件测度了2000—2018年黄河流域县域单元景观破碎化时空格局特征,并借助地理探测器模型探讨了黄河流域景观破碎化时空分异的成因。研究表明：(1)研究期间黄河流域斑块密度(PD)无显著变化,边缘密度(ED)、景观形状指数(LSI)、平均斑块面积(Area＿AM)均呈先增后减的变化趋势,聚集度指数(AI)呈先减后增的趋势;蔓延度指数(CONTAG)持续降低,分离度(DIVISION)、香农多样性指数(SHDI)逐年增高。(2)研究期间黄河流域景观破碎化程度总体逐渐加剧,流域中下游各省破碎化程度变化剧烈,上游各省破碎化程度变化趋于平稳。(3)地理探测器结果显示,黄河流域景观破碎化受到自然、社会等多重因素影响,因...     

Seasonal changes in sperm DNA fragmentation of Murciano-Granadina goats: The compelling case for dynamic assessment

Evidence is provided of seasonal changes in the rate of DNA fragmentation dynamics of sperm collected from goats Murciano-Granadina breed), in a Spanish Breeding Centre at 41°N latitude. Results show that the initial assessment of sperm DNA fragmentation (T0) was not sufficient to differentiate sperm DNA fragmentation of bucks collected at different times of the year (Kruskal–Wallis 2.399; P = 0.493). However, when thawed semen was subsequently incubated at 37 °C for periods of between 2 and 48 h, differences were recorded in the rate of sperm DNA fragmentation (r-SDF), that are indicative of seasonal changes in reproduction (Log Rank: Mantel–Cox; χ² = 158.6; DF = 3; P < 0.001). Goat semen collected and cryopreserved in the Spanish winter and spring resulted in a poor post-thaw sperm DNA longevity and recorded a r-SDF of 0.8 and 1.3 per hour, after 48 h of incubation respectively. The r-SDF subsequently decreased to 0.16 and 0.36 per hour during summer and autumn. It is therefore, recommended that semen samples from Murciano-Granadina goats housed above the 40°N latitude be collected and cryopreserved in the summer and early autumn. This would result in a more stable DNA molecule, which is likely to improve the reproductive success.     

Protein fragmentation via liquid chromatography-quadrupole time-of-flight mass spectrometry: the use of limited sequence information in structural characterization

Fragmentation and "top-down" sequencing of intact proteins by mass spectrometry (MS) is most commonly performed by infusion of protein solutions into Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometers. However, the high cost of this instrumentation, coupled with the need to infuse "clean" solutions (lacking standard biological buffers), limits broad application of this technique. The current study describes an alternative approach to top-down sequencing using in-source fragmentation on quadrupole time-of-flight (Q-Tof) instrumentation coupled with reversed-phase liquid chromatography (LC). Application of this technique to purified recombinant samples yielded protein fragments during routine LC-MS analysis. The presence of multiple N- and C-terminal fragments allowed localization of structural modifications without proteolytic digestion. The method was extended to complex samples by using LC conditions that provided high-resolution protein separation. Utility of the method was illustrated by real-time monitoring of protein modifications occurring in reconstituted apoptosomes. These experiments illustrate that intact protein mass and limited sequence information can be obtained simultaneously on an LC timescale. This approach will allow a wide variety of laboratories to routinely apply top-down sequencing to problems in structural characterization, protein purification, and biomarker identification.     

生境片断化对濒危植物景东翅子树种群结构与动态的影响

生境的破坏及其片断化是生物多样性丧失的主要原因, 了解生境片断化对植物种群动态的影响十分必要。本文比较分析了不同大小生境片断(5 ha和15 ha)和连续森林中濒危植物景东翅子树(Pterospermum kingtungense)种群的结构与动态, 目的是明确影响景东翅子树种群动态的关键生活史阶段及其种群保护的目标, 为濒危植物种群保护和管理策略的制定提供科学依据。在上述3种生境中分别设立3个50 m × 100 m的1.5 ha固定样地, 调查景东翅子树所有个体的胸径(其中幼苗和幼树为地径)和高度、个体的存活及幼苗的补充情况。基于上述统计参数, 建立预测种群动态的Lefkovitch矩阵模型, 同时应用矩阵模型的弹性分析方法量化种群统计参数对种群增长率的相对贡献。结果表明: (1)在5 ha和15 ha生境片断及连续森林各1.5 ha的样地中, 2018年首次调查到景东翅子树的个体数分别为34、82和88株, 2019年复查时的个体数分别为33、82和87株。3种生境中景东翅子树种群的年龄结构均以幼树为主, 但5 ha生境片断森林缺乏幼苗和大树(包括成树和亚成树), 而15 ha生境片断森林幼苗较丰富。(2)在3种生境中景东翅子树种群的增长率等于1 (15 ha生境片断)或趋近于1 (5 ha生境片断和连续森林), 说明不同生境中的景东翅子树种群比较稳定, 这主要是因为其各生活史阶段的存活率均较高。(3)景东翅子树成树和亚成树阶段的存活率对种群增长率的贡献最大, 是影响其种群动态的关键生活史阶段。因此对于大树(包括成树和亚成树)的保护是极度濒危植物景东翅子树种群维持的关键。研究结果揭示小生境片断降低了景东翅子树种群的数量, 改变了种群的结构, 但对种群动态的影响效应尚未显现。因此对于这些小生境片断中濒危植物种群的保护和恢复是可行的, 也是有价值的。     

生境破碎化对动物种群存活的影响

生境破碎是生物多样性下降的主要原因之一。通常以岛屿生物地理学、异质种群生物学和景观生态学的理论来解释不同空间尺度中生境破碎化的生态学效应。生境破碎化引起面积效应、隔离效应和边缘效应。这些效应通过影响动物种群的绝灭阈值、分布和多度、种间关系以及生态系统过程,最终影响动物种群的存活。野外研究表明,破碎化对动物的影响,因物种、生境类型和地理区域不同而有所变化,因此,预测物种在破碎生境中的存活比较困难。研究热点集中于：确定生境面积损失和生境斑块的空间格局对破碎景观中物种绝灭的相对影响,破碎景观中物种的适宜生境比例和绝灭阈值,异质种群动态以及生态系统的生态过程。随着3S技术的发展,生境破碎化模型趋于复杂,而发展有效的模型和验证模型将成为一项富有挑战性的任务。     

Assessing fragmentation and disturbance of west Kenyan rainforests by means of remotely sensed time series data and landscape metrics

Biodiversity in tropical rainforests is heavily influenced by land use/cover change (LUCC), but so far there have been few LUCC studies conducted in Africa. We present several methods that make use of remotely sensed data and landscape metrics and allow for assessment of the development of land cover and thus forest fragmentation and disturbance over a substantial period of time. The study covers Kakamega Forest and its associated forest areas in western Kenya, over the last 30 years. The accuracy of a supervised multispectral classification of Landsat time series data encompassing seven time steps between 1972 and 2001 is numerically assessed using ground truth reference data considering the 2001 time step. Here, buffering the forest areas by 1 km, highest user's accuracies for the forest classes ‘near natural + old secondary forest’ (87.50%), ‘secondary forest’ (80.00%) and ‘bushland/shrubs’ (81.08%) are revealed. Images of a spatially distributed fragmentation index derived from the land cover time series by applying a three by 3 pixel‐sized moving window to determine forest pixels’ adjacency, highlight trends in forest fragmentation, e.g. the splitting into two separate forests along the Yala/Ikuywa corridor. Calculations of mean fragmentation indices for the Biodiversity Monitoring Transect Analysis in Eastern Africa (BIOTA‐East Africa) focus research areas are used to evaluate the fragmentation index and to demonstrate its potential to extrapolate (e.g. biological) field findings in space and time. Here we argue for a correlation of the fragmentation indices results not only with forest management regimes, but with population distribution and accessibility (e.g. by roads). A cluster analysis applying the isodata‐algorithm on the classification results of all seven times steps allows for a rapid visual assessment of the distinct pattern of typical land cover development trends since 1972. This reveals that parts of Kakamega Forest have experienced severe forest loss while others, especially in the north‐east, show signs of succession.     

Circadian rhythm of autophagy proteins in hippocampus is blunted by sleep fragmentation

Autophagy is essential for normal cellular survival and activity. Circadian rhythms of autophagy have been studied in several peripheral organs but not yet reported in the brain. Here, we measured the circadian rhythm of autophagy-related proteins in mouse hippocampus and tested the effect of sleep fragmentation (SF). Expressions of the autophagy-related proteins microtubule‐associated protein 1 light chain 3 (LC3) and beclin were determined by western blotting and immunohistochemistry. Both the hippocampal LC3 signal and the ratio of its lipid-conjugated form LC3-II to its cytosolic form LC3-I showed a 24 h rhythm. The peak was seen at ZT6 (1 pm) and the nadir at ZT16 (1 am). The LC3 immunoreactivity in hippocampal CA1 pyramidal neurons also distributed differently, with more diffuse cytoplasmic appearance at ZT16. Chronic SF had a mild effect to disrupt the 24 h rhythm of LC3 and beclin expression. Interestingly, a greater effect of SF was seen after 24 h of recovery sleep when LC3-II expression was attenuated at both the peak and trough of circadian activities. Overall, the results show for the first time that the hippocampus has a distinct rhythm of autophagy that can be altered by SF.     

The effects of translocation-induced isolation and fragmentation on the cultural evolution of bird song

Understanding the divergence of behavioural signals in isolated populations is critical to knowing how certain barriers to gene flow can develop. For many bird species, songs are essential for conspecific recognition and mate choice. Measuring the rate of song divergence in natural populations is difficult, but translocations of endangered birds to isolated islands for conservation purposes can yield insights, as the age and source of founder populations are completely known. We found significant and rapid evolution in the structure and diversity of bird song in North Island saddlebacks, Philesturnus rufusater, in New Zealand, with two distinct lineages evolving in < 50 years. The strong environmental filters of serial translocations resulted in cultural bottlenecks that generated drift and reduced song variability within islands. This rapid divergence coupled with loss of song diversity has important implications for the behavioural evolution of this species, demonstrating previously unrecognised biological consequences of conservation management.     

Global patterns of fragmentation and connectivity of mammalian carnivore habitat

Although mammalian carnivores are vulnerable to habitat fragmentation and require landscape connectivity, their global patterns of fragmentation and connectivity have not been examined. We use recently developed high-resolution habitat suitability models to conduct comparative analyses and to identify global hotspots of fragmentation and connectivity for the world's terrestrial carnivores. Species with less fragmentation (i.e. more interior high-quality habitat) had larger geographical ranges, a greater proportion of habitat within their range, greater habitat connectivity and a lower risk of extinction. Species with higher connectivity (i.e. less habitat isolation) also had a greater proportion of high-quality habitat, but had smaller, not larger, ranges, probably reflecting shorter distances between habitat patches for species with restricted distributions; such species were also more threatened, as would be expected given the negative relationship between range size and extinction risk. Fragmentation and connectivity did not differ among Carnivora families, and body mass was associated with connectivity but not fragmentation. On average, only 54.3 per cent of a species' geographical range comprised high-quality habitat, and more troubling, only 5.2 per cent of the range comprised such habitat within protected areas. Identification of global hotspots of fragmentation and connectivity will help guide strategic priorities for carnivore conservation.