LRP16短发夹RNA慢病毒载体的构建及LRP16稳定抑制细胞的建立简

目的：构建靶向LRPl6基因的短发夹RNA（shRNA）慢病毒表达载体,鉴定其在HeLa细胞中对LRP16的抑制效果。方法：构建pWPT-U6-LRPl6shRNA-CMV-GFP慢病毒载体,通过病毒感染、细胞筛选、Western印迹等步骤,获得LRP16基因稳定抑制的细胞株。结果：构建了具有LRP16干扰效果的慢病毒载体,感染HeLa细胞后获得了稳定沉默LRP16及对照的细胞株;经克隆筛选,在荧光显微镜下观察到近似100％感染细胞发出绿色荧光;Western印迹证实pWPT-U6-L374-CMV-GFP和pWPT-U6-L668-CMV-GFP均可显著抑制HeLa细胞株中LRP16蛋白的表达,其中pWPT-Gsi-L374-GFP的抑制效果更好。结论：构建了靶向人LRP16基因shRNA慢病毒载体及LRP16稳定抑制的HeLa细胞系。     

小干扰RNA抑制LRP16基因表达限制了MCF-7乳腺癌细胞增殖

雌激素雌二醇上调人乳腺癌细胞MCF 7中LRP16基因表达 ,该基因过表达促进MCF 7细胞增殖 .为进一步探讨LRP16基因不同表达水平对MCF 7细胞增殖的影响以及对雌激素的反应性增殖能力 ,采用针对LRP16基因特异的小干扰RNA策略 ,通过逆转录病毒介导及抗性筛选构建了LRP16基因被稳定抑制的 2个MCF 7细胞系 ,针对绿色荧光蛋白的干扰序列作为阴性对照 .Northern印迹实验检测了LRP16基因在各个细胞株中mNRA的水平 ,与对照组细胞比较 ,针对LRP16基因不同位置的 2个小干扰RNA可分别将该基因抑制 90 %和 6 0 % .细胞增殖试验结果显示 ,MCF 7细胞中LRP16基因表达抑制率越高 ,细胞增殖速率减慢越显著 (P <0 0 5 ) ;软琼脂集落形成试验结果显示 ,抑制LRP16基因在MCF 7细胞中表达 ,限制了细胞锚定非依赖性生长 ;细胞周期分析结果表明 ,LRP16基因抑表达使MCF 7细胞G1 S周期转换受抑 ;Western印迹结果表明 ,LRP16基因表达抑制的细胞中细胞周期蛋白E及细胞周期蛋白D1蛋白水平显著下调 ,但未检测到P5 3及Rb蛋白表达水平的影响 .雌二醇刺激的增殖实验结果显示 ,抑制LRP16基因表达没有消除MCF 7细胞的反应性增殖特征 .上述结果表明 ,LRP16基因表达量与MCF 7细胞增殖能力密切相关 ,抑制其表达可有效限制MCF 7细胞的增殖能力 ,提     

RNAi沉默STAT3基因对人大细胞肺癌细胞增殖的影响

旨在研究RNAi沉默STAT3基因对人大细胞肺癌NCI-H460细胞增殖的影响。针对STAT3基因mRNA设计合成5条短发夹DNA,构建重组SiRNA-ST3质粒(命名为SiRNA-ST3-1,2,3,4,N)。用重组质粒分别转染NCI-H460细胞,RT-PCR法检测转染24 h后STAT3 mRNA的表达;Western blotting法检测转染24 h和48 h后STAT3、pSTAT3蛋白表达;MTT法检测转染24 h、48 h、72 h后NCI-H460细胞增殖情况。结果显示,SiRNA-ST3载体构建成功。RT-PCR和Western blotting检测结果表明,NCI-H460细胞转染重组质粒SiRNA-ST3-2和SiRNA-ST3-3后STAT3基因mRNA转录和STAT3、pSTAT3蛋白表达都明显下降(P<0.05)。与未转染组比,SiRNA-ST3-2组和SiRNA-ST3-3组NCI-H460增殖能力24 h、48 h降低明显(P<0.05);与SiRNA-ST3-N组比,SiRNA-ST3-2组和SiRNA-ST3-3组NCI-H460增殖能力48 h降低明显(P<0.05)。由此证实,构建的重组质粒SiRNA-ST3-2、SiRNA-ST3-3能有效靶向沉默STAT3基因,并抑制人大细胞肺癌NCI-H460细胞的增殖能力。     

parp10基因RNA干扰有效靶点的筛选及验证

目的：合成并筛选有效抑制parp10表达的siRNA。方法：根据parp10 cDNA序列,设计并合成prap10基因潜在的RNA干扰（RNAi）片段,将合成的寡核苷酸序列构建到pEGFP-C1H1U6载体中;通过双萤光素酶试验、Western blotting筛选有效的干扰序列;进一步用G418对A549细胞进行耐受度筛选,确定最低耐受度;用G418溶液对转染RNAi重组质粒的A549细胞进行筛选,通过RT-PCR鉴定干扰效果。结果：针对617bp处所构建的RNAi载体能够抑制PARP10的表达,用浓度为400μg/mL G418的McCoy′s 5A培养基筛选转染后的细胞,获得了能够表达绿色荧光标签蛋白的A549细胞株,经RT-PCR检测发现,PARP10表达受到抑制。结论：获得了能够有效抑制PARP10表达的特异性小干扰RNA（siRNA）,为进一步研究其生物学功能提供了条件。     

野生型和突变型p16在H460细胞株的表达

应用ＰＣＲ体外定点突为技术,构建了ｐ１６－Ｐ４８Ｌ和ｐ１６－Ｄ７４ｎ突变体。野生型和突变型ｐ１６ｃＤＮＡ克隆地ｐｃＤＮＡ３真核表达载体,导入纯合缺失ｐ１６基因的人肺癌细胞株Ｈ４６０,经ＲＮＡ点杂交初筛吴Ｇ４１８抗性的细胞株,再用Ｎｏｒｔｈｅｒｎ印迹证实外源ｐ１６表达。     

Gateway-compatible vectors for plant functional genomics and proteomics

Gateway cloning technology facilitates high-throughput cloning of target sequences by making use of the bacteriophage lambda site-specific recombination system. Target sequences are first captured in a commercially available "entry vector" and are then recombined into various "destination vectors" for expression in different experimental organisms. Gateway technology has been embraced by a number of plant laboratories that have engineered destination vectors for promoter specificity analyses, protein localization studies, protein/protein interaction studies, constitutive or inducible protein expression studies, gene knockdown by RNA interference, or affinity purification experiments. We review the various types of Gateway destination vectors that are currently available to the plant research community and provide links and references to enable additional information to be obtained concerning these vectors. We also describe a set of "pEarleyGate" plasmid vectors for Agrobacterium-mediated plant transformation that translationally fuse FLAG, HA, cMyc, AcV5 or tandem affinity purification epitope tags onto target proteins, with or without an adjacent fluorescent protein. The oligopeptide epitope tags allow the affinity purification, immunolocalization or immunoprecipitation of recombinant proteins expressed in vivo. We demonstrate the utility of pEarleyGate destination vectors for the expression of epitope-tagged proteins that can be affinity captured or localized by immunofluorescence microscopy. Antibodies detecting the FLAG, HA, cMyc and AcV5 tags show relatively little cross-reaction with endogenous proteins in a variety of monocotyledonous and dicotyledonous plants, suggesting broad utility for the tags and vectors.     

Stabilized baculovirus vector expressing a heterologous gene and GP64 from a single bicistronic transcript

The efficient scale-up of recombinant protein production in insect-cell bioreactors using baculovirus expression vectors is hampered by reductions in yield with increasing viral passage, the so-called passage effect. This phenomenon is characterized by the generation and subsequent accumulation of defective interfering baculoviruses (DIs), which interfere with the replication of genomically intact virus. A novel baculovirus expression vector is presented equipped with a bicistronic expression cassette that allows the simultaneous expression of the recombinant gene (GFP, first cistron) and an essential baculovirus gene (GP64, second cistron) from a single messenger RNA (mRNA). The translation of GP64 is mediated by an internal ribosome entry site (IRES) element from Rhopalosiphum padi virus (RhPV) while the native GP64 gene is deleted. In this way, a dominant selection pressure is placed on the entire bicistronic mRNA and hence on the maintenance of the foreign gene. The bicistronic expression vector was superior to the control baculovirus vector in that GFP expression remained at much higher levels upon continued virus passage. The versatility of this stabilized vector was demonstrated by its ability to propagate in a number of cell lines including Sf21, Sf9 and High Five cells. This novel baculovirus vector is especially valuable for large-scale recombinant protein production in insect-cell bioreactors where the number of viral passages is high.     

短发夹 RNA 介导 RNA 干扰的时间 和剂量效应研究

用 RNA 干扰 (RNA interference , RNAi) 技术抑制哺乳动物细胞中外源报告基因的表达,以探讨该过程中 RNAi 作用的剂量和时间效应 . 应用 Lipofectamine 2000 将外源报告基因的表达载体与编码短发夹 RNA (short hairpin RNA , shRNA) 的质粒共转染 HEK293H 细胞,观察 shRNA 载体对报告基因的抑制效应 . 转染后, shRNAs 的瞬时表达可特异地抑制细胞内报告基因的表达 . 在共转染后 12 , 24 , 48 , 60 , 72 , 96 h 时检测 EGFP (enhanced green fluorescent protein , EGFP) 基因 mRNA 及蛋白质表达水平,结果显示, EGFP mRNA 及蛋白质表达在 12 h 时略有降低, 24~48 h 时表达逐渐降低, 48~72 h 时降低最明显,其后 EGFP 表达水平逐渐恢复 . 提示该过程中 RNAi 效应呈现由弱到强、又由强到弱的逐渐消逝趋势 . 共转染一系列剂量比例的 EGFP 干扰载体与靶载体的结果表明,在一定剂量范围内, RNA 干扰载体所介导的抑制效应与干扰载体剂量大小有关,当其剂量进一步加大足以抑制外源基因表达时,抑制效应则维持在一“平台期” . 此外,通过 RNAi 抑制 HeLa 细胞、 HEK293 细胞中荧光素酶基因的表达, 荧光素酶活性变化也表现出上述类似的效应 . 这些结果表明,在体外哺乳动物细胞中,基于表达载体的 RNAi 作用呈现剂量和时间依赖性效应 . 这为基于载体表达的 RNAi 技术应用研究提供了一定的理论参考及依据 .     

在活体小鼠中筛选lZP3基因RNAi有效靶位点的研究

ZP3作为精子结合的靶对象在卵母细胞受精中起着关键作用,也因此而成为研究哺乳动物受精机理的焦点。本研究参照新疆草原兔尾鼠卵透明带3(zonapellucida3geneofLaguruslagurus,lZP3)的mRNA,选择了针对lZP3mRNA的3个区域合成寡聚核苷酸连接到干扰载体pGenesil-1上,构建了3个针对lZP3mRNA的重组干扰载体,和pCDNA3-lZP3表达载体采用脂质体法共转染Hela细胞以及通过尾静脉大容量快速注射法(Hydrodynamics-basedtransfectionmethod,HD法)共注射小鼠,半定量RT-PCR和real-timePCR检测Hela细胞和小鼠肝脏中lZP3mRNA的表达情况,以筛选干扰lZP3mRNA的有效靶位点。结果表明,通过HD法共注射干扰载体和表达载体后,外源基因mRNA在小鼠肝脏中的表达和共转染Hela细胞后在Hela细胞中的表达情况是一致的,有2个干扰载体可以有效干扰lZP3mRNA的表达。研究还说明,利用HD法以小鼠作为实验材料筛选RNA干扰的有效靶位点是一条切实可行的方法。     

Soaking RNAi-mediated modification of Sf9 cells for baculovirus expression system by ectopic expression of Caenorhabditis elegans SID-1

RNA interference (RNAi) is a biological phenomenon that silences the expression of genes of interest. Passive double-stranded RNA (dsRNA) uptake has been uniquely observed in Caenorhabditis elegans due to the expression of systemic RNAi defective-1 (SID-1). We report that ectopic expression of CeSID-1 endows the Sf9 cells with a capacity for soaking RNAi. Soaking the Sf9-SID1 with dsRNA corresponding to either exogenous or endogenous target genes induced a significant decrease in the amount of mRNA or protein. These results enabled us to modify the target proteins of baculovirus expression vector system in both quantities and posttranslational modifications. The current low-cost and high-efficiency RNAi system is useful for high-throughput gene function analysis and mass production of recombinant protein.     

Rapid establishment of high-producing cell lines using dicistronic vectors with glutamine synthetase as the selection marker

Recombinant proteins are useful tools in biological research, drug development, and drug screening. Specially designed expression vectors have been developed to introduce cDNA for recombinant protein expression in mammalian cells. We have combined a discistronic mRNA design for expression of the recombinant protein, using glutamine synthetase (GS) for selection. A soluble form of human interleukin-4 receptor alpha chain was used as the model protein. The dicistronic vectors were compared to a standard expression vector in CHO-K1 cells in parallel experiments. Our data showed that a dicistronic vector containing an internal ribosome entry site (IRES) of the encephalomyocarditis virus (ECMV) was superior to a conventional expression vector in both levels of protein expression and amplification efficiency. The productivity of these clones was stable without selection pressure for an extended period of time. The GS selection system within a dicistronic vector design can achieve rapid and efficient gene amplification for protein production.     

在活体小鼠中筛选IZP3基因RNAi有效靶位点的研究

ZP3作为精子结合的靶对象在卵母细胞受精中起着关键作用,也因此而成为研究哺乳动物受精机理的焦点。本研究参照新疆草原兔尾鼠卵透明带3（zonapellucida3 gene of Lagurus lagurus,IZP3）的mRNA,选择了针对IZP3 mRNA的3个区域合成寡聚核苷酸连接到干扰载体pGenesil-1上,构建了3个针对IZP3 mRNA的重组干扰载体,和pCDNA3-IZP3表达载体采用脂质体法共转染Hela细胞以及通过尾静脉大容量快速注射法（Hydrodynamics—based transfection method,HD法）共注射小鼠,半定量RT—PCR和real—timePCR检测Hela细胞和小鼠肝脏中IZP3mRNA的表达情况,以筛选干扰IZP3mRNA的有效靶位点。结果表明,通过HD法共注射干扰载体和表达载体后,外源基因mRNA在小鼠肝脏中的表达和共转染Hela细胞后在Hel。细胞中的表达情况是一致的,有2个干扰载体可以有效干扰IZP3mRNA的表达。研究还说明,利用HD法以小鼠作为实验材料筛选RNA干扰的有效靶位点是一条切实可行的方法。     

逆转录病毒载体介导的RNAi抑制乳腺癌细胞BSP基因表达

目的构建抑制人日5P基因表达的RNA干扰逆转录病毒载体,筛选建立稳定抑制BSP表达的MDA-MB-231BO细胞系。方法构建靶向人BSP基因的逆转录病毒重组质粒pSilencer—BSP27、pSilencer—BSP81和pSilencer—BSP100。将其包装成病毒后感染MDA—MB-23180细胞。用RT—PCR和Western印迹检测成功感染细胞（231BO．BSP27、231BO．BSP81、231BO—BSP100细胞）BSP基因的抑制效果。结果双酶切和测序结果显示重组核酸片段序列与设计的序列完全相同。RT—PCR和Western印迹结果显示231BO—BSP27、BO—BSP81和231BO—BSP100细胞BSP基因在mRNA水平和蛋白水平抑制效率分别为：70．8％、79．4％和30．1％：69．3％,75．2％和27．8％。结论成功构建抑制人BSP基因表达的RNAi逆转录病毒载体pSilencer．BSP27、pSilencer．BSP81和pSilencer—BSP100。获得高效稳定抑制BSP表达的231BO—BSP27、231BO．BSP81细胞系。     

用pLNCX2携带人MCPH1基因shRNA重组逆转录病毒载体的构建及鉴定

目的建立逆转录病毒介导的MCPH1基因RNA干扰表达体系并观察其在宫颈癌Caski细胞中对MCPH1表达的影响。方法将人MCPH1基因RNA干扰双链DNA片段重组到逆转录病毒质粒pLNCX2中,构建携带人MCPHI基因RNA干扰的逆转录病毒载体pLNCX2-shRNA—MCPH1,经PT67细胞包装后,产生的重组逆转录病毒感染宫颈癌细胞株Caski细胞,并用G418筛选产生稳定的细胞克隆,用RT—PCR和Western印迹检测细胞中MCPH1mRNA和蛋白表达的变化。结果重组逆转录病毒质粒经测序鉴定正确,逆转录病毒感染Caski细胞后用G418筛选出稳定的细胞克隆,RT—PCR和Western印迹检测人MCPH1mRNA和蛋白表达水平明显低于阴性对照组和未干扰组。结论携带人MCPHI基因RNA干扰双链DNA片段的逆转录病毒感染Caski细胞后能明显抑制MCPHImRNA和蛋白表达,为进一步研究MCPH1在宫颈癌中的作用奠定了基础。     

shRNA慢病毒载体稳定抑制LRP16 表达的HepG2 细胞的构建及鉴定

目的:构建LRP16基因抑制表达的Hep G2稳定细胞系,鉴定其LRP16基因抑制表达的效果。方法:构建LPP-HSH008357-LVRH1GP-200短发卡RNA(sh RNA)慢病毒表达载体,用该抑制表达慢病毒感染Hep G2细胞系,通过荧光筛选及药筛,获得LRP16基因稳定抑制表达细胞系;最终运用Q-PCR和Western blot鉴定该稳定细胞系中LRP16的表达。结果:构建了LRP16基因抑制表达及抑制表达对照的Hep G2稳定细胞系,并通过Q-PCR和Western blot进行了鉴定。Q-PCR结果显示相对于对照稳转株(LPP-CSHCTR001-LVRH1GP-100),抑制表达稳转株(LPP-HSH008357-7-LVRH1GP-200)LRP16基因的抑制效率是4组抑制表达细胞中效果最理想的一组,其抑制效率高达98%;Western blot结果也显示该抑制表达稳转株(LPP-HSH008357-7-LVRH1GP-200)的LRP16蛋白表达量明显低于野生型Hep G2细胞及对照稳转株(LPP-CSHCTR001-LVRH1GP-100),其结果与Q-PCR一致。结论:构建并鉴定了人LRP16基因抑制表达Hep G2稳定细胞系及其相应的对照稳转株。     

靶向白介素-1α基因沉默的Hela229稳定细胞系的构建

目的：构建针对IL-1α基因的shRNA表达载体,筛选能够抑制Hela229细胞内源性IL-1α表达的shRNA,建立无内源性IL-1d表达的Hela229稳定细胞系.方法：根据shRNA的设计原则,以IL-1 αcDNA oligo为模板设计一段21 bp核苷酸目标序列,构建成siRNA的DNA模板并克隆到shRNA表达载体pRNAT-U6.1/Neo中,获得靶向抑制IL-1α基因的重组shRNA质粒,转染Hela229细胞,经G418筛选后获得单克隆稳定细胞株,用ELISA方法在蛋白水平上检测IL-1α基因的沉默效果.结果：经酶切鉴定和测序分析确定IL-1 α-shRNA重组质粒构建正确,ELISA筛选出能够显著抑制内源性IL-1α表达的shRNA,获得沉默内源性IL-1 α表达的单克隆稳定的Hela229细胞株.结论：靶向IL-1α基因的重组shRNA表达质粒可显著抑制Hela229细胞内源性IL-1α的表达,成功构建靶向IL-1α基因沉默的Hela229稳定细胞系.     

慢病毒介导RNA干扰SOCS3基因在猪前体脂肪细胞和成肌细胞中的表达

构建细胞信号抑制因子3(suppressor of cytokine signaling 3,SOCS3)慢病毒干扰载体,获得有感染性的病毒颗粒,感染猪前体脂肪细胞和成肌细胞,并检测其对前体脂肪细胞的干扰效率.首先设计并合成3对针对目的基因SOCS3的siRNA序列,退火后连接于LentiH1上,测序验证后,与包装质粒△8.9和vsv-g共转染到293T细胞中进行包装和浓缩,纯化后测定病毒滴度,然后感染猪前体脂肪细胞和成肌细胞.重组慢病毒载体LentiH1-siRNA经酶切和测序鉴定正确,病毒滴度为3×107tu/mL,感染猪成肌细胞和前体脂肪细胞后,可见报告基因GFP的表达;RT-PCR和Western印迹分析表明,前体脂肪细胞中SOCS3的表达被显著下调,其中LentiH1-siRNA3介导对SOCS3基因mRNA和蛋白的干扰效率分别达53%和71%.本研究成功构建了猪SOCS3慢病毒干扰载体,感染猪前体脂肪细胞能稳定沉默SOCS3基因的表达,为深入研究SOCS3的功能奠定了基础.