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1.
We examine the effects of different biogeographic histories on assemblage composition in three major marine habitats in two biogeographically distinct marine realms. Specifically, we quantify the taxonomic and functional composition of fish assemblages that characterise coral reef, seagrass and mangrove habitats, to explore the potential effects of biogeographic history and environment on assemblage composition. The three habitats were surveyed in the Caribbean and on the Great Barrier Reef using a standardised underwater visual census method to record fish size and abundance data. The taxonomic composition of assemblages followed biogeographic expectations, with realm‐specific family‐level compositions. In marked contrast, the functional composition of assemblages separated habitats regardless of their biogeographic locations. In essence, taxonomy characterises biogeographic realms while functional groups characterise habitats. The Caribbean and Indo‐West Pacific have been separated for approximately 15 million years. The two realms have different taxonomic structures which reflect this extended separation, however, the three dominant shallow‐water marine habitats all retain distinct functional characteristics: seagrass fishes are functionally similar regardless of their taxonomic composition or biogeographic location. Likewise, for coral reefs and mangroves. The results emphasise the advantages and limitations of taxonomic vs. functional metrics in evaluating patterns. Taxonomy primarily reflects biogeographic and evolutionary history while functional characteristics may better reflect ecological constraints.  相似文献   

2.
The dorsal surfaces of many taxonomic groups often feature repetitive pattern elements consisting of stripes, spots, or bands. Here, we investigate how distinct categories of camouflage pattern work by relating them to ecological and behavioral traits in 439 species of gecko. We use phylogenetic comparative methods to test outstanding hypotheses based on camouflage theory and research in other taxa. We found that bands are associated with nocturnal activity, suggesting bands provide effective camouflage for motionless geckos resting in refugia during the day. A predicted association between stripes and diurnal activity was not supported, suggesting that stripes do not work via dazzle camouflage mechanisms in geckos. This, along with a lack of support for our prediction that plain patterning should be associated with open habitats, suggests that similar camouflage patterns do not work in consistent ways across taxa. We also found that plain and striped lineages frequently switched between using open or closed habitats, whereas spotted lineages rarely transitioned. This suggests that pattern categories differ in how specialized or generalized their camouflage is. This result has ramifications for theory on how camouflage compromises to background heterogeneity and how camouflage pattern might influence evolutionary trajectories.  相似文献   

3.
4.
Approaches to macroevolution require integration of its two fundamental components, i.e. the origin and the sorting of variation, in a hierarchical framework. Macroevolution occurs in multiple currencies that are only loosely correlated, notably taxonomic diversity, morphological disparity, and functional variety. The origin of variation within this conceptual framework is increasingly understood in developmental terms, with the semi-hierarchical structure of gene regulatory networks (GRNs, used here in a broad sense incorporating not just the genetic circuitry per se but the factors controlling the timing and location of gene expression and repression), the non-linear relation between magnitude of genetic change and the phenotypic results, the evolutionary potential of co-opting existing GRNs, and developmental responsiveness to nongenetic signals (i.e. epigenetics and plasticity), all requiring modification of standard microevolutionary models, and rendering difficult any simple definition of evolutionary novelty. The developmental factors underlying macroevolution create anisotropic probabilities—i.e., an uneven density distribution—of evolutionary change around any given phenotypic starting point, and the potential for coordinated changes among traits that can accommodate change via epigenetic mechanisms. From this standpoint, “punctuated equilibrium” and “phyletic gradualism” simply represent two cells in a matrix of evolutionary models of phenotypic change, and the origin of trends and evolutionary novelty are not simply functions of ecological opportunity. Over long timescales, contingency becomes especially important, and can be viewed in terms of macroevolutionary lags (the temporal separation between the origin of a trait or clade and subsequent diversification); such lags can arise by several mechanisms: as geological or phylogenetic artifacts, or when diversifications require synergistic interactions among traits, or between traits and external events. The temporal and spatial patterns of the origins of evolutionary novelties are a challenge to macroevolutionary theory; individual events can be described retrospectively, but a general model relating development, genetics, and ecology is needed. An accompanying paper (Jablonski in Evol Biol 2017) reviews diversity dynamics and the sorting of variation, with some general conclusions.  相似文献   

5.
Changes in size, whether ontogenetic or phylogenetic, tend to be associated with changes in shape. This allometry can arise through two different evolutionary mechanisms: (1) selection acting primarily on overall size may be associated with changes in shape because of physiological and mechanical constraints or differential responses of different body components; or (2) selection acting primarily on shape (on the size of specific body components) may be associated with changes in overall size because of genetic correlations, and thus correlated responses, of other body components. To assess the relative importance of these two mechanisms, shape polymorphism is examined along two axes of size dimorphism (sex and wing morphology) in the common waterstrider, Gerris remigis Say. Eight measurements were made of body and appendage components of 234 adults, from three independent populations. Univariate and multivariate analyses reveal that both sexes and wing morphs differ significantly in size and shape. Shape differentiation along the two axes of size dimorphism is found to be dissimilar, partially independent of size, and strongly correlated with the ecological specialization of the various morphs. These observations suggest that selection is acting directly on shape, and thus that allometry in this species primarily reflects shape-mediated changes in size (mechanism 2), rather than size-mediated changes in shape. The role of developmental processes in facilitating this shape differentiation is discussed.  相似文献   

6.
Explanations for taxonomic diversity in a particular clade often implicate evolutionary innovations, possessed by members of the clade, that are thought to have favoured diversification. We review such “key innovation”; hypotheses, the ecological mechanisms involved, and potential tests of such hypotheses.

Key innovation hypotheses can be supported by evidence of ecological mechanism and by comparative tests. We argue that both are necessary for convincing support. In fact, few key innovation hypotheses are currently backed by either one.

We group ecological mechanisms of diversification in three major classes. Diversification may be spurred by innovations that: I) allow invasion of new adaptive zones; II) increase fitness, allowing one clade to replace another; or III) increase the propensity for reproductive or ecological specialization. Key innovations in different classes are likely to produce different evolutionary patterns, and therefore may be supported by different kinds of ecological evidence.  相似文献   

7.
The evolutionary integration of complex morphological structures is a macroevolutionary pattern in which morphogenetic components evolve in a coordinated fashion, which can result from the interplay among processes of developmental, genetic integration, and different types of selection. We tested hypotheses of ecological versus developmental factors underlying patterns of within‐species and evolutionary integration in the mandible of phyllostomid bats, during the most impressive ecological and morphological radiation among mammals. Shape variation of mandibular morphogenetic components was associated with diet, and the transition of integration patterns from developmental to within‐species to evolutionary was examined. Within‐species (as a proxy to genetic) integration in different lineages resembled developmental integration regardless of diet specialization, however, evolutionary integration patterns reflected selection in different mandibular components. For dietary specializations requiring extensive functional changes in mastication patterns or biting, such as frugivores and sanguivores, the evolutionary integration pattern was not associated with expected within‐species or developmental integration. On the other hand, specializations with lower mastication demands or without major functional reorganization (such as nectarivores and carnivores), presented evolutionary integration patterns similar to the expected developmental pattern. These results show that evolutionary integration patterns are largely a result of independent selection on specific components regardless of developmental modules.  相似文献   

8.
Extralimital traits—evolutionary innovations that represent unprecedented departures from the phenotypic norm in the clade in which they arise—are often thought preferentially to evolve in island-like settings, but accumulating evidence indicates that they also arise in highly diverse, competitively rigorous ecosystems. In order to evaluate the origins of extralimital traits, I reconstructed the history of all ecological and shell-morphological innovations in Miocene to Recent shallow-water molluscs from the two great modern tropical marine realms, the Indo-West Pacific (IWP) and Atlantic-eastern Pacific (AEP), with the expectation that the more diverse IWP would show a higher incidence of innovation. Of the 66 innovations I identified, 53 (80%) are IWP and 13 (20%) are AEP in origin. Data on the numbers of living species in 26 molluscan clades in the two tropical realms indicate that the species ratio (AEP to total number of species 0.32 ± 0.115) exceeds the innovation ratio (AEP to total innovations 0.21). The per-species frequency of innovation is therefore significantly higher in the IWP. None of the innovations is unique to endemic taxa on oceanic islands. I suggest that warm, large, highly productive environments are more conducive to the establishment of new ecological roles and phenotypic states than are smaller, less productive, more island-like settings; and that diversity need not be correlated with either high productivity or evolutionary opportunity for innovation.  相似文献   

9.
Onshore-offshore patterns of faunal change occurred at many taxonomic scales during the Paleozoic Era, ranging from replacement of the Cambrian evolutionary fauna by the Paleozoic fauna to the environmental expansion of many orders and classes. A simple mathematical model is constructed to investigate such change. The environmental gradient across the marine shelf-slope is treated as a linear array of discrete habitats, each of which holds a set number of species, as observed in the fossil record. During any interval of time, some portion of the species in each habitat becomes extinct by background processes, with rates of extinction varying among both clades and habitats, as also observed in the record. After extinction, species are replaced from within the habitat and from immediately adjacent habitats, with proportions dependent on surviving species. This model leads to the prediction that extinction-resistant clades will always diversify at the expense of extinction-prone clades. But if extinction intensity is highest in nearshore habitats, extinction-resistant clades will expand preferentially in the onshore direction, build up diversity there, and then diversify outward toward the offshore. Thus, onshore-offshore patterns of diversification may be the expectation for faunal change quite independently of whether or not clades originate onshore. When the model is parameterized for Paleozoic trilobites and brachiopods, numerical solutions exhibit both a pattern of faunal change and a time span for diversification similar to that seen in the fossil record. They also generate structure similar to that seen in global diversification, including logistic patterns of growth, declining origination but constant extinction within clades through time, and declining overall extinction across clades through time.  相似文献   

10.

The green macroalga Caulerpa filiformis has been spreading on shallow soft sediment habitats along the Peruvian coast, colonizing previously unvegetated sediments to create monospecific meadows. We examined the nature of the impact of C. filiformis meadows on the density, taxonomic richness and assemblage structure of epifaunal and infaunal benthic macroinvertebrates. Specifically, we tested whether the spread of C. filiformis has resulted in different macroinvertebrate assemblages than those formed by the dominant native macroalgae (i.e., Rhodymenia spp.) and unvegetated sediments. Surveys were undertaken in two bays in each of two locations, in central and southern Peru, during winter 2017 and summer 2018. In general, our results show that macroinvertebrate assemblages were similar across all three habitats, although there were some differences, related to location and time, but with no clear patterns observed. Taxonomic richness and density was generally higher in the vegetated habitats than the unvegetated habitat, and where there were differences between the two vegetated habitats there was no consistent pattern of which habitat supported the highest richness or density. Given invading C. filiformis is primarily colonizing unvegetated habitats it would appear that this species is creating a new niche which supports similar assemblages, but higher taxonomic richness and density than unvegetated habitats. While our study suggests that C. filiformis is having a limited ecological impact we recommend that actions be put in place to limit the spread of this invasive species at the same time as increasing monitoring of the ecological impacts of this species as lags in the ecological impacts of invasive species are common.

  相似文献   

11.
The use of biochemical and genetic characters to explore species or population relationships has been applied to taxonomic questions since the 60s. In responding to the central question of the evolutionary history of Triatominae, i.e. their monophyletic or polyphyletic origin, two important questions arise (i) to what extent is the morphologically-based classification valid for assessing phylogenetic relationships? and (ii) what are the main mechanisms underlying speciation in Triatominae? Phenetic and genetic studies so far developed suggest that speciation in Triatominae may be a rapid process mainly driven by ecological factors.  相似文献   

12.
Since 1990 the recognition of deep homologies among metazoan developmental processes and the spread of more mechanistic approaches to developmental biology have led to a resurgence of interest in evolutionary novelty and innovation. Other evolutionary biologists have proposed central roles for behaviour and phenotypic plasticity in generating the conditions for the construction of novel morphologies, or invoked the accessibility of new regions of vast sequence spaces. These approaches contrast with more traditional emphasis on the exploitation of ecological opportunities as the primary source of novelty. This definitional cornucopia reflects differing stress placed on three attributes of novelties: their radical nature, the generation of new taxa, and ecological and evolutionary impact. Such different emphasis has led to conflating four distinct issues: the origin of novel attributes (genes, developmental processes, phenotypic characters), new functions, higher clades and the ecological impact of new structures and functions. Here I distinguish novelty (the origin of new characters, deep character transformations, or new combinations) from innovation, the ecological and evolutionary success of clades. Evidence from the fossil record of macroevolutionary lags between the origin of a novelty and its ecological success demonstrates that novelty may be decoupled from innovation, and only definitions of novelty based on radicality (rather than generativity or consequentiality) can be assessed without reference to the subsequent history of the clade to which a novelty belongs. These considerations suggest a conceptual framework for novelty and innovation, involving: (i) generation of the potential for novelty; (ii) the formation of novel attributes; (iii) refinement of novelties through adaptation; (iv) exploitation of novelties by a clade, which may coincide with a new round of ecological or environmental potentiation; followed by (v) the establishment of innovations through ecological processes. This framework recognizes that there is little empirical support for either the dominance of ecological opportunity, nor abrupt discontinuities (often caricatured as ‘hopeful monsters’). This general framework may be extended to aspects of cultural and social innovation.  相似文献   

13.
The colour patterns of Heliconius butterflies are composed from a relatively simple set of pattern elements whose homologues are recognizable throughout the genus. Although Heliconius colour patterns look quite different from those of most nymphalids, these pattern elements are seen to derive from the generalized nymphalid groundplan. The differences arise primarily from the loss or positional shift of certain pattern elements, a high degree of fusion between individual pattern elements, and, in the forewing, asymmetries of the pattern elements relative to the wing-cell midline. The scheme of homologies we present is consistent with what is currently known about the comparative morphology and developmental physiology of colour pattern formation in Lepidoptera, and provides a framework for the interpretation of developmental, evolutionary and genetic studies in Heliconius.  相似文献   

14.
Green plants (Viridiplantae) are ancient photosynthetic organisms that thrive both in aquatic and terrestrial ecosystems, greatly contributing to the changes in global climates and ecosystems. Significant progress has been made toward understanding the origin and evolution of green plants, and plant biologists have arrived at the consensus that green plants first originated in marine deep-water environments and later colonized fresh water and dry land. The origin of green plants, colonization of land by plants and rapid radiation of angiosperms are three key evolutionary events during the long history of green plants. However, the comprehensive understanding of evolutionary features and molecular innovations that enabled green plants to adapt to complex and changeable environments are still limited. Here, we review current knowledge of phylogenetic relationships and divergence times of green plants, and discuss key morphological innovations and distinct drivers in the evolution of green plants. Ultimately, we highlight fundamental questions to advance our understanding of the phenotypic novelty, environmental adaptation, and domestication of green plants.  相似文献   

15.
The ecological and physiological significance of body size is well recognized. However, key macroevolutionary questions regarding the dependency of body size trends on the taxonomic scale of analysis and the role of environment in controlling long-term evolution of body size are largely unknown. Here, we evaluate these issues for decapod crustaceans, a group that diversified in the Mesozoic. A compilation of body size data for 792 brachyuran crab and lobster species reveals that their maximum, mean and median body size increased, but no increase in minimum size was observed. This increase is not expressed within lineages, but is rather a product of the appearance and/or diversification of new clades of larger, primarily burrowing to shelter-seeking decapods. This argues against directional selective pressures within lineages. Rather, the trend is a macroevolutionary consequence of species sorting: preferential origination of new decapod clades with intrinsically larger body sizes. Furthermore, body size evolution appears to have been habitat-controlled. In the Cretaceous, reef-associated crabs became markedly smaller than those in other habitats, a pattern that persists today. The long-term increase in body size of crabs and lobsters, coupled with their increased diversity and abundance, suggests that their ecological impact may have increased over evolutionary time.  相似文献   

16.
Morphological integration has the potential to link morphological variation within populations with morphological evolution among species. This study begins to investigate this link by comparing integration among shoulder girdle elements (e.g. scapular blade, glenoid, coracoid, etc.) during the origin and evolution of therian mammals, and within modern bat, opossum and mouse populations. In this study, correlations among skeletal elements and patterns of allometry are used as proxies for integration. Results suggest that shoulder girdle elements tended to vary and evolve independently during the origin of mammals and subsequent radiation of placentals, consistent with the elements’ distinct developmental and evolutionary origins. This finding suggests that skeletal element correlations, and therefore integration, can be conserved over large taxonomic and temporal scales. However, marsupials display a different pattern in which shoulder girdle elements tend to be more integrated, with the exception of the coracoid. This finding is consistent with a shift in the pattern of skeletal element integration coincident with the appearance of the marsupial mode of reproduction. This finding provides further evidence that development can play a significant role in the establishment of patterns of skeletal element correlation and that patterns of skeletal element correlation can themselves evolve when faced with sufficient selective pressures.  相似文献   

17.
The origin and possible antiquity of the spectacularly diverse modern deep-sea fauna has been debated since the beginning of deep-sea research in the mid-nineteenth century. Recent hypotheses, based on biogeographic patterns and molecular clock estimates, support a latest Mesozoic or early Cenozoic date for the origin of key groups of the present deep-sea fauna (echinoids, octopods). This relatively young age is consistent with hypotheses that argue for extensive extinction during Jurassic and Cretaceous Oceanic Anoxic Events (OAEs) and the mid-Cenozoic cooling of deep-water masses, implying repeated re-colonization by immigration of taxa from shallow-water habitats. Here we report on a well-preserved echinoderm assemblage from deep-sea (1000–1500 m paleodepth) sediments of the NE-Atlantic of Early Cretaceous age (114 Ma). The assemblage is strikingly similar to that of extant bathyal echinoderm communities in composition, including families and genera found exclusively in modern deep-sea habitats. A number of taxa found in the assemblage have no fossil record at shelf depths postdating the assemblage, which precludes the possibility of deep-sea recolonization from shallow habitats following episodic extinction at least for those groups. Our discovery provides the first key fossil evidence that a significant part of the modern deep-sea fauna is considerably older than previously assumed. As a consequence, most major paleoceanographic events had far less impact on the diversity of deep-sea faunas than has been implied. It also suggests that deep-sea biota are more resilient to extinction events than shallow-water forms, and that the unusual deep-sea environment, indeed, provides evolutionary stability which is very rarely punctuated on macroevolutionary time scales.  相似文献   

18.
The evolutionary history of vascular plants is reviewed by extrapolation back through time from a wide range of data recently derived from the present flora, using as the central theme evolutionary inferences gained from phylogenies reconstructed as cladograms. Any region of the genome can be used to infer relationships, but only a combination of knowledge of morphology and the developmental genes that underpin morphology can allow evolutionary interpretation of macroevolutionary transitions; this in turn is necessary to identify bona fide evolutionary radiations and any putative causal key innovations. Such studies require clades to be delimited not by the inclusion of particular extant ‘crown’ species but rather by specific apo‐morphies, thereby giving important phylogenetic roles to extinct as well as extant species. Dating phylogenetic divergences via molecular clocks remains seriously inaccurate, and ultimately relies primarily on fossil benchmarks. First principles suggest that evolution of most regions of the genome is fundamentally gradual, whereas evolution of regions especially prone to strong selection pressure, and of the many facets of the phenotype, is punctuational, being characterized through time dominantly by stasis. Sequence data have proved valuable for inferring monophyletic groups, but within the now widely accepted context of monophyly the taxonomic hierarchy should primarily reflect degrees of morphological rather than molecular divergence. Incongruence among contrasting data sets is best explained by understanding the biological constraints operating on each type of phylogenetic information. The conventional ‘uniformitarian’ view of evolution has only limited applicability as one traces the history of land plants through time. Diversity increased in stepwise fashion, reflecting either attainments of complexity and/or fitness thresholds by the lineage (intrinsic) or the availability of unusually permissive environments, often following major perturbations (extrinsic). The Quaternary period demonstrates especially well the resilience, and ease of migration, of the Earth's vegetation. A higher frequency of generation of novel phenotypes in the deep past is possible, but a far higher frequency of their establishment is certain; together, these factors generate an evolutionary pattern of nested radiations that is fractal, as saturation of the resource space rendered the environment decreasingly permissive through time. In the immediate future, evolutionary‐developmental genetics will have increasing value for testing homology, interpreting homoplasy and elucidating evolutionary constraints, and will become easier to pursue as whole‐genome sequences of additional ‘model’ species further invigorate comparative genomics. Complexity of gene regulation, both by other genes and by the cellular and extra‐cellular environment, appears a particularly fruitful area for further research. Nonetheless, environmental filtering of evolutionary novelties (whether instantaneously isolated mutant ‘prospecies’ or classic neoDarwinian ‘selfish genes’ selectively spreading through panmictic populations) can only be effectively understood by longer term monitoring of populations in the wild, to better capture rare evolutionary and ecological events and to better assess the efficacy of traditional microevolutionary processes. We believe that the resulting renaissance in macroevolutionary studies will encourage a broader systematic perspective ‐ one that better encompasses the remarkable diversity of evolutionary processes that together generated the present diversity of life.  相似文献   

19.
Invertebrate lineages tend to originate and become extinct at a higher rate in onshore than in offshore habitats over long temporal durations (more than 10 Myr), but it remains unclear whether this pattern scales down to durations of stages (less than 5 Myr) or even sequences (less than 0.5 Myr). We assess whether onshore–offshore gradients in long-term turnover between the tropical Eocene and the warm-temperate Plio-Pleistocene can be extrapolated from gradients in short-term turnover, using abundances of molluscan species from bulk samples in the northeast Atlantic Province. We find that temporal turnover of metacommunities does not significantly decline with depth over short durations (less than 5 Myr), but significantly declines with depth between the Eocene and Plio-Pleistocene (approx. 50 Myr). This decline is determined by a higher onshore extinction of Eocene genera and families, by a higher onshore variability in abundances of genera and families, and by an onshore expansion of genera and families that were frequent offshore in the Eocene. Onshore–offshore decline in turnover thus emerges only over long temporal durations. We suggest that this emergence is triggered by abrupt and spatially extensive climatic or oceanographic perturbations that occurred between the Eocene and Plio-Pleistocene. Plio-Pleistocene metacommunities show a high proportion of bathymetric generalists, in contrast to Eocene metacommunities. Accordingly, the net cooling and weaker thermal gradients may have allowed offshore specialists to expand into onshore habitats and maintain their presence in offshore habitats.  相似文献   

20.
Most integrative studies involving phylogenetic, developmental and ecological trends showed that the diversity of developmental modifications among the Platyhelminthes was linked to transmission opportunity pressures. For parasitic flatworms with complex life cycles it was suggested that the evolutionary forces that constrained or enhanced developmental strategies implied heterochronic patterns. Similar patterns were also reported from the Monogenea with direct life cycles, especially for Polystomatidae, which infest amphibious Sarcopterygians. Polystoma, whose members are recovered almost exclusively from anuran hosts of the Neobatrachia, is capable of following two alternative developmental strategies depending on the physiological stage of its host. Processes by which parasites reach maturity are strikingly different, and lead to discrete adult phenotypes within the same parasite species. In the present study, we investigate the origin and evolution of developmental patterns of polystomatids in a phylogenetic framework, using an integrative approach of heterochrony and evolutionary ecology. The results suggest that both phenotypes have coexisted during the early stages of polystome evolution, and that neither of them can be considered as the ancestral one. The two developmental pathways, each associated with one life cycle, may have arisen independently prior to polystome diversification, when strictly aquatic sarcopterygians attempted colonization of temporary freshwater environments. The occurrence of these two patterns within species of the genus Polystoma is suggested to reflect the ancestral condition, and to have allowed both developmental strategies to be successful depending on shifts in transmission opportunities. Thus, host evolutionary ecology may be the main factor in shaping developmental strategies within polystomatids.  相似文献   

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