Purification and characterization of a Na/K dependent alginate lyase from turban shell gut Vibrio sp. YKW-34

An alginate lyase with high specific enzyme activity was purified from Vibrio sp. YKW-34, which was newly isolated from turban shell gut. The alginate lyase was purified by in order of ion exchange, hydrophobic and gel filtration chromatographies to homogeneity with a recovery of 7% and a fold of 25. This alginate lyase was composed of a single polypeptide chain with molecular mass of 60 kDa and isoelectric point of 5.5–5.7. The optimal pH and temperature for alginate lyase activity were pH 7.0 and 40 °C, respectively. The alginate lyase was stable over pH 7.0–10.0 and at temperature below 50 °C. The alginate lyase had substrate specificity for both poly-guluronate and poly-mannuronate units. The k_cat/K_m value for alginate (heterotype) was 1.7 × 10⁶ s⁻¹ M⁻¹. The enzyme activity was completely lost by dialysis and restored by addition of Na⁺ or K⁺. The optimal activity exhibited in 0.1 M of Na⁺ or K⁺. This enzyme was resistant to denaturing reagents (SDS and urea), reducing reagents (β-mercaptoethanol and DTT) and chelating reagents (EGTA and EDTA).     

A comparison of the poly(hexamethylenebiguanidinium chloride) assay and a neutral equivalent method for the determination of alginates in industrial liquors extracted from brown seaweed

The poly(hexamethylenebiguanidinium chloride) assay and a neutral equivalent method have been used to estimate the sodium alginate content of industrial liquors extracted from brown seaweed. With the liquor samples examined, agreement to within 5% was achieved with the two methods under defined alginate concentration conditions. Statistical evaluation of the data using a paired comparison t-test has shown that a difference of only 0·10±0·05 can be expected with 95% confidence, between the two methods in the analysis of liquor samples with sodium alginate contents in the range 2·00–3·83 mg ml⁻¹. In the majority of cases the PHMBH⁺ Cl⁻ method gave a slightly higher estimate that the neutral equivalent method. Consideration of the practical aspects of the two alternative methods allows this difference to be explained. The simplicity of the PHMBH⁺ Cl⁻ assay renders it suitable for the rapid screening of large numbers of alginate samples.     

Optimization of a polypyrrole glucose oxidase biosensor

An amperometric glucose biosensor was fabricated by the electrochemical polymerization of pyrrole onto a platinum electrode in the presence of the enzyme glucose oxidase in a KCl solution at a potential of + 0·65 V versus SCE. The enzyme was entrapped into the polypyrrole film during the electropolymerization process. Glucose responses were measured by potentio-statting the enzyme electrode at a potential of + 0·7 V versus SCE in order to oxidize the hydrogen generated by the oxidation of glucose by the enzyme in the presence of oxygen. Experiments were performed to determined the optimal conditions of the polypyrrole glucose oxidase film preparation (pyrrole and glucose oxidase concentrations in the plating solution) and the response to glucose from such electrodes was evaluated as a function of film thickness, pH and temperature. It was found that a concentration of 0·3 M pyrrole in the presence of 65 U/ml of glucose oxidase in 0·01 M KCl were the optimal parameters for the fabrication of the biosensor. The optimal response was obtained for a film thickness of 0·17 μm (75 mC/cm²) at pH 6 and at a temperature of 313 K. The temperature dependence of the amperometric response indicated an activation energy of 41 kJ/mole. The linearity of the enzyme electrode response ranged from 1·0 mM to 7·5 mM glucose and kinetic parameters determined for the optimized biosensors were 33·4 mM for the K_m and 7·2 μA for the I_max. It was demonstrated that the internal diffusion of hydrogen peroxide through the polypyrrole layer to the platinum surface was the main limiting factor controlling the magnitude of the response of the biosensor to glucose. The response was directly related to the enzyme loading in the polypyrrole film. The shelf life and the operational stability of the optimized biosensor exceed 500 days and 175 assays, respectively. The substrate specificity of the entrapped glucose oxidase was not altered by the immobilization procedure.     

Detection of Escherichia coli O157:H7 with langasite pure shear horizontal surface acoustic wave sensors

The toxigenic Escherichia coli O157:H7 bacterium has been connected with hemorrhagic colitis and hemolytic uremic syndrome, which may be characterized by diarrhea, kidney failure and death. On average, O157:H7 causes 73,000 illnesses, 2100 hospitalizations and 60 deaths annually in the United States alone. There is the need for sensors capable of rapidly detecting dangerous microbes in food and water supplies to limit the exposure of human and animal populations. Previous work by the authors used shear horizontal surface acoustic wave (SH SAW) devices fabricated on langasite (LGS) Euler angles (0°, 22°, 90°) to successfully detect macromolecular protein assemblies. The devices also demonstrated favorable temperature stability, biocompatibility and low attenuation in liquid environments, suggesting their applicability to bacterial detection. In this paper, a biosensor test setup utilizing a small volume fluid injection system, stable temperature control and high frequency phase measurement was applied to validate LGS SH SAW biosensors for bacterial detection. The LGS SH SAW delay lines were fabricated and derivatized with a rabbit polyclonal IgG antibody, which selectively binds to E. coli O157:H7, in this case a non-toxigenic test strain. To quantify the effect of non-specific binding (negative control), an antibody directed against the trinitrophenyl hapten (TNP) was used as a binding layer. Test E. coli bacteria were cultured, fixed with formaldehyde, stained with cell-permeant nucleic acid stain, suspended in phosphate buffered saline and applied to the antibody-coated sensing surfaces. The biosensor transmission coefficient phase was monitored using a network analyzer. Phase responses of about 14° were measured for the E. coli detection, as compared to 2° due to non-specific anti-TNP binding. A 30:1 preference for E. coli binding to the anti-O157:H7 layer when compared to the anti-TNP layer was observed with fluorescence microscopy, thus confirming the selectivity of the antibody surface to E. coli.     

Catecholamine detection using enzymatic amplification

Different amplification sensors based on the substrate recycling principle were investigated with respect to their applicability to catecholamine detection. In the bioelectrocatalytic approach, glassy carbon electrodes were modified by laccase or a PQQ-dependent glucose dehydrogenase. Substrate recycling occurs and the detection limit is in the lower nanomolar concentration range (e.g. 10 nM dopamine and 1 nM noradrenaline for the laccase- and glucose dehydrogenase-modified electrodes, respectively). Combinations of glucose dehydrogenase with laccase or tyrosinase were investigated as bienzymatic probes. Among the systems we studied, the laccase/glucose dehydrogenase sensor is the most sensitive (detection limit: 0·5 nM adrenaline). The selectivities of the different sensor systems are discussed. Application of the laccase/glucose dehydrogenase electrode in different media (i.e. brain homogenate, heart effluate) was successfully shown. For samples with high concentrations of interfering substances (uric and ascorbic acid), the interferences can be effectively removed using enzymatic methods.     

Dielectrophoresis of chloroplasts

Dielectrophoresis is the migration of neutral particles in a nonuniform electric field (a.c. or d.c.) toward the region of highest field intensity. Dielectrophoresis should be distinguished from electrophoresis which is the migration of charged particles in electric fields. Chloroplasts, isolated from spinach leaves, can be collected on platinum electrodes by dielectrophoresis. Stripped chloroplasts lacking outer envelopes and stroma were prepared from fresh spinach leaves in a 0.5 M sucrose-0.05 M Tris buffer (pH 7.4). The chloroplast preparation was desalted with a mixed anion-cation resin to a resistivity of 3 · 10⁴–5 · 10⁴ ohm · cm. Dielectrophoresis was conducted in a pin-pin type leucite cell 3.2 mm in diameter and 1.5 mm deep. The 0.425-mm diameter electrodes were 0.85 mm apart and 0.05 mm below the surface of the cell. The collection of chloroplasts with ac current is a function of the frequency. 3-(3,4-Dichlorophenyl)-1,1-dimethylurea (DCMU)-stabilized chloroplasts had collection maxima at 300, 1 · 10⁶, and 3 · 10⁷ Hz when run at 50 V. The rate of collection is a function of the square root of the time. Both DCMU and darkness tend to stabilize collections. It is suggested that dielectrophoresis may be a useful tool for the study of chloroplast physiology and perhaps, for the preparation and purification of chloroplasts.     

Modified chitosans carrying sulfonic acid groups

The sulfonic acid function was introduced into chitosan by reacting it with 5-formyl-2-furansulfonic acid, sodium salt, under the mild conditions of the Schiff reaction, thus avoiding polymer degradation and O-substitution. The reaction of chitosan (degree of deacetylation 0·58) with 5-formyl-2-furansulfonic acid, sodium salt produced a viscous solution that, upon hydrogenation, yielded N-sulfofurfuryl chitosan sodium salt. Infrared spectrometry, alkalimetry and elemental analysis provided evidence that the degree of substitution was 0·26. Circular dichroism measurements on solutions showed multiple Cotton bands in the pH interval 7·1–8·3, while at lower and higher pH values just one negative band was observed, thus providing indication of the polyampholyte nature of N-sulfofurfuryl chitosan. The ¹³C-NMR and FTIR spectra showed typical signals of furane carbons. Metal ion solutions at concentrations in the range 0·1–5·0 m , pH 6, promoted precipitation of metal ion complexes of N-sulfofurfuryl chitosan, with most effective removal from the solutions for Cu(II), Pb(II) and Ni(II). Sulfoethyl N-carboxymethyl chitosan was also synthesized from 2-chloroethanesulfonic acid in organic media: the sulfur content was similar (3·7%) in both polymers.     

Gelation of xanthan with trivalent metal ions

In-situ gelation of semidilute xanthan solutions with trivalent chromium, aluminum or iron ions was studied by rheology and UV-spectroscopy. Measurements of the elastic modulus of xanthan gel cylinders prepared by dialysis against the complexing ion at pH values from 2 to 6 indicate that monomeric species of the ion are ineffective, whereas dimeric or higher oligomeric species are effective in crosslinking the polysaccharide. When chromium was used as the crosslinking species, the dependence of the gelation rate on the ionic concentration followed a power law with a coefficient of 1·7. The gelation time and the gelation rate were found to extrapolate to zero at 1 m Cr for 2·5 mg/ml xanthan. The limiting concentration of xanthan needed for gelation with 5 m Cr(III) at 20°C was estimated as 0·35 mg/ml. This critical xanthan concentration is close to the overlap concentration c^* estimated from the experimentally determined intrinsic viscosity [η] using c^* = 1·4/[η]. An apparent activation energy for crosslinking of xanthan was calculated as E_a = 42 kJ/mol and E_a = 108 kJ/mol for Cr and Al ions, respectively. The fractal dimensionality of xanthan-Cr at the sol-gel transition was estimated as 1·3 applying the Chambon-Winter criterion for gelation, thus indicating that this gelation criterion is applicable also to stiff-chain polysaccharides such as xanthan.     

Amperometric mediated carbon paste biosensor based on D-fructose dehydrogenase for the determination of fructose in food analysis

A new mediated amperometric biosensor for fructose is described. The sensor is based on a commercially available D-fructose dehydrogenase. The enzyme is incorporated in a carbon paste matrix containing Os(bpy)₂Cl₂ as redox mediator that achieves electron transfer at 0·1 V (versus Ag/AgCl) with maximum apparent current densities of 1·2 mA/cm². The dependence of the steady-state current on the loading of the mediator and the enzyme, other electrode construction parameters, the operating potential, the pH and the temperature was studied. In the steady-state mode the response current was directly proportional to D-fructose concentration from 0·2 to 20mM with a detection limit of 35 μM (signal-to-noise ratio, S/N, 3). In the flow injection analysis mode the response current was directly proportional to D-fructose concentration from 0·5 to 15 M with a detection limit of 115 μM (S/N 3). The sensor was used for the determination of fructose in food samples in a flow injection system and validated with a commercial enzyme kit.     

Organic charge transfer complex based printable biosensor

This paper describes the preparation of an organic charge transfer complex (CTC) based printable enzyme electrode. CTC crystals were prepared by mixing TCNQ powder with TTF solution (in acetonitrile). Glucose oxidase (GOD) was adsorbed at the CTC crystal surface in a monolayer. A printable paste was prepared by mixing GOD-adsorbed crystals with a binder and a solvent. This paste was applied to an electrode cavity and vacuum dried. A thin layer of gelatin was cast on the paste filled dried electrode, and cross-linked with glutaraldehyde in the dry condition. The sensors were fixed in a flow injection system, and continuously polarized at 0·15 V and 37°C, and the samples were automatically injected every 30 min. The developed sensors produced a huge response curren with an extended linear range of detection (0–100 mM) and the response was unaffected by the presence of normal oxygen in the buffer solution. The sensor showed excellent stability. The performance of the sensors was significantly influenced by the binder used.     

The chemical composition of the cuticular wax of cranberry

Cuticular wax of cranberry fruit (Vaccinium macrocarpon var. Howes) was analysed by thin layer and gas-liquid chromatography in conjunction with mass spectrometry and infrared spectroscopy. The wax was shown to contain n-paraffins (10·7%), n-aldehydes (14·3%), n-alcohols (6·5%), n-fatty acids (9·7%), sterols (5·0%) and pentacyclic triterpene alcohols (5·8%), acetates (6·1%) and acids (30·7%).     

Development and characterization in vitro of a catalase-based biosensor for hydrogen peroxide monitoring

There is increasing evidence that hydrogen peroxide (H₂O₂) may act as a neuromodulator in the brain, as well as contributing to neurodegeneration in diseased states, such as Parkinson's disease. The ability to monitor changes in endogenous H₂O₂ in vivo with high temporal resolution is essential in order to further elucidate the roles of H₂O₂ in the central nervous system. Here, we describe the in vitro characterization of an implantable catalase-based H₂O₂ biosensor. The biosensor comprises two amperometric electrodes, one with catalase immobilized on the surface and one without enzyme (blank). The analytical signal is then the difference between the two electrodes. The H₂O₂ sensitivity of various designs was compared, and ranged from 0 to 56 ± 4 mA cm⁻² M⁻¹. The most successful design incorporated a Nafion^® layer followed by a poly-o-phenylenediamine (PPD) polymer layer. Catalase was adsorbed onto the PPD layer and then cross-linked with glutaraldehyde. The ability of the biosensors to exclude interference from ascorbic acid, and other interference species found in vivo, was also tested. A variety of the catalase-based biosensor designs described here show promise for in vivo monitoring of endogenous H₂O₂ in the brain.     

Proteomics-based identification of outer-membrane proteins responsible for import of macromolecules in Sphingomonas sp. A1: alginate-binding flagellin on the cell surface

A nonmotile gram-negative bacterium, Sphingomonas sp. A1, directly incorporates macromolecules such as alginate through a "super-channel" consisting of a pit formed on the cell surface, alginate-binding proteins in the periplasm, and an ATP-binding cassette transporter in the inner membrane. Here, we demonstrate the proteomics-based identification of cell-surface proteins involved in the formation of the pit and/or import of alginate. Cell-surface proteins were prepared from the outer membrane released as vesicles during the conversion of intact cells to spheroplasts. Seven proteins (p1-p7) with acidic isoelectric points were inducibly expressed in the outer membrane of strain A1 cells grown on alginate and showed significant identity with bacterial cell-surface proteins (p1-p4, TonB-dependent outer-membrane transporter; p5 and p6, flagellin; and p7, lipoprotein). Each mutant with a disruption of the p1-p4 or p6 gene showed significant growth retardation in the alginate medium. Flagellin homologues (p5 and p6) were further analyzed because strain A1 forms no flagellum. p5 was found to be uniformly distributed on the cell surface by immunogold-labeling electron microscopy and to exhibit alginate binding with a nanomolar dissociation constant by a surface plasmon resonance sensor. The cell surface of the p6 gene disruptant differed from that of the wild-type strain A1 in that pit formation was incomplete and cell-surface structures shifted from pleats to networks. These results suggest that, distinct from bacterial flagellins constituting a helical filament of flagella, strain A1 cell-surface flagellin homologues function as receptors for alginate and/or regulators of cell-surface structures.     

Microencapsulation: a Strategy for Formulation of Inoculum

A non-toxic phase separation method was developed for microencapsulation of inoculum used in biological control. Aqueous sodium alginate or gelatin and agar was mixed with inocula of various biopesticides and emulsified in a mixture of corn oil, n-hexadecane, and lecithin. Gelatin and agar globules gelled in the emulsion; alginate globules gelled after settling into a lower phase of aqueous CaCl₂. A layer of gelatinous material thus surrounded the inoculum as 'capsules'. Mixing with n-hexadecane reduced the specific gravity and surface tension of the oil, allowing aqueous extraction of the capsules. Successful extraction of alginate capsules depended upon lecithin (>0.17%), n-hexadecane (>30%), and CaCl₂ (>0.01 M) concentrations. Alginate-encapsulated macroconidia of Fusarium avenaceum caused 23±3% leaf area damage to seedlings of marsh reed grass, versus 4±3% for unformulated controls. In green foxtail seedlings, gelatin and agar-encapsulated conidia of Bipolaris sorokiniana caused 21.3 vs. 7.9 lesions per plant for encapsulated versus unformulated conidia. Mortality of Douglas-fir tussock moth larvae caused by a nuclear polyhedrosis virus was delayed when 23 polyhedral inclusion bodies (PIB) were incorporated into alginate capsules, but it proceeded normally for 2.3 PIB/capsule, where efficacy was also higher versus positive controls. Microencapsulation enhances the activity of biological control agents and protects them from adverse conditions.     

Luminescent yeast cells entrapped in hydrogels for estrogenic endocrine disrupting chemical biodetection

In the construction of luminescent yeast cell based fibre-optic biosensors, we demonstrate a novel approach for estrogenic endocrine disrupting chemical (EDC) biodetection by entrapping genetically modified Saccharomyces cerevisiae cells, containing the estrogen receptor alpha-mediated expression of the luc reporter gene, in hydrogel matrices based on calcium alginate or PVA. In order to insure a significant signal, an optimal immobilization ratio of 1:2 alginate 3% (w/v): 5 × 10⁶ [cells/ml], respectively, was used with the highest 17-β-estradiol (β-E2) induction factor after 2.5 h of incubation with 10 [nM] β-E2. It was shown that biocompatible alginate beads, 4.27–4.55 × 10⁵ [CFU/bead], which were characterized by a detection limit of 0.08 [μg l⁻¹] and an EC50 of 0.64 [μg l⁻¹] for β-E2, retained their viability for luminescence measurements after 1 month of storage at −80 °C slow freeze condition, and thus repeated cell cultivations were not required. The assay reproducibility for each tested EDC, represented by the coefficients of variation (CV), ranged from 4.35 to 18.47%. An alternative immobilization method, based on a room temperature partial drying of polyvinyl alcohol (PVA) solution (LentiKat^® Liquid) and cell suspension mix, was investigated with only a slightly lower detection limit for β-E2 than that reported with alginate beads. Alginate yeast based hydrogels may also be applicable to the analysis of environmental water samples since the trend of detected estrogenic activities with alginate beads roughly correlated with LC–MS–MS analytical results.     

Anisotropy in hard dental tissues

The critical angle reflection technique was used to determine longitudinal and shear sonic velocity components in the exposed surface of bovine incisors along the tooth axis and perpendicular to it. By grinding a flat on the tooth surface successive layers were exposed and the velocity components measured. Plots of the velocity variation with depth were prepared which show some variation in the enamel, much less in the dentine and a sharp drop at the dentino-enamel junction. Strong evidence of anisotropy is demonstrated, especially in enamel.

The longitudinal velocity component is larger than previous values for measurements through these hard tissues. Hydroxyapatite and bone models assuming hexagonal symmetry indicate that the surface velocity should be the smaller component. The Katz hexagonally symmetrical bone model shows a significant dip in the velocity along the 45° propagation direction. If it is assumed that prior measurements correspond to the 45° rather than the c-axis direction, a set of elastic constants can be calculated which are an estimate for enamel and dentine. These resemble the Katz bone model.

Enamel C₁₁ 115, C₁₂ 42·4, C₁₃ 30, ₃₃ 125, C₄₄ 22·8

Dentine C₁₁ 37, C₁₂ 16·6, C₁₃ 8·7, C₃₃ 39, C₄₄ 5·7

Katz bone model C₁₁ 31, C₁₂ 14·7, C₁₃ 11·3, C₃₃ 33, C₄₄ 6·2

(all × 10⁹N/m²)

Poisson's ratio for enamel is estimated to be 0·28 and for dentine 0·32.     

Surface temperatures of growing pigs in relation to the duration of acclimation to air temperature or draught

The aim of this work was to study to what extent surface temperatures of growing pigs are altered during acclimation to a change of the air temperature and to exposure to draught.

4 groups of 10 pigs (Large White × Dutch Landrace) of approximately 10 weeks old were used. They were housed in 2 calorimeters with 2 pens each. In the reference chamber air temperature was kept constant at 25°C, in the other chamber air temperature could be lowered to 15°C, and a draught was also applied. Surface temperatures of the pigs were measured by means of Probey® Thermal Video System, with an accuracy of ±0.3°C.

Surface temperatures of growing pigs were obviously related to air temperature, draught and the duration of food withdrawal. Acclimation to air temperature or draught as measured by surface temperatures was not observed between days, but within and between night periods.

Also indications of huddling, vasocontriction and even cold-induced vasodilatation within the neck, chest and abdomen region of the pigs' body surface were observed.     

Microbial fuel cell-based biosensor for fast analysis of biodegradable organic matter

The current study was made to develop a biosensor based on a single-chamber microbial fuel cell in which anaerobes were retained in the anode compartment separated from the cathode compartment by a proton exchange membrane. In the sensor a replaceable anaerobic consortium was used for analyzing biodegradable organic matter. The anaerobes acted as biocatalysts in oxidizing organic matter and transferring electrons to the anode. The biocatalysts were renewed for each sample analysis by replacing the old anaerobic consortium with an equal amount of fresh one. A glucose standard solution was used as the target substrate. To obtain the maximum sensor output, the MFC-based sensor system was optimized using an 800 Ω resistor as the load to the external electric circuit and 25 mM phosphate buffer with 50 mM NaCl as catholyte in the aerobic compartment. The temperature of anaerobic compartment was maintained at optimal 37 °C. The cell potential across the electrodes increased with increasing loading of glucose. The sensor response was linear against concentration of glucose up to 25 g l⁻¹. The detection limit was found as 0.025 g l⁻¹. The microbial fuel cell with replaceable anaerobic consortium could be used as a biosensor for on-line monitoring of organic matter.     

Biogas-plant effluent as an organic fertiliser in fish polyculture

Biogas-plant effluent collected from a KVIC model biogas-plant fed on cattle waste was utilised in fish polyculture. Biogas-plant effluent was applied at 0·15% concentration at 3-day intervals. The growth rate of Labeo rohita was 4·52 ±0 ·75 g fish⁻¹ day⁻¹, of Cirrhina mrigala 3·36 ± 0·48 g fish⁻ day⁻¹ and of Cyprinus carpio was 1·82 ± 0·41 g fish⁻¹ day⁻¹. Total fish production was 13·44 ± 0·77 kg 0·002 ha⁻¹ year⁻¹ (6653 kg ha⁻¹ year⁻¹) without any supplementary fish-feed.     

Homogeneous amperometric immunoassay for theophylline in whole blood

A homogeneous spectrophotometric EMIT immunoassay kit for the quantitation of theophylline in serum or plasma has been modified to produce a rapid, amperometric immunoassay requiring a 50 μl whole blood sample. The basis of the detection system for the assay is the electrochemical oxidation of NADH produced by G6PDH-labelled theophylline at a potential of + 150 mV vs Ag/AgCl using platinised activated carbon (PACE) electrodes. Comparison of the amperometric whole blood method with the conventional spectrophotometric plasma assay produced a reasonable correlation: Y = 0·90x − 1·01, (r = 0·98, N = 12). The advantage of the new method is that simple and robust instrumentation can rapidly determine theophylline in whole blood with no sample pre-treatment or separation steps.