Description of two new marine pleurostomatid ciliates, Loxophyllum choii nov. spec. and L. shini nov. spec. (Ciliophora, Pleurostomatida) from China

The morphology and infraciliature of two pleurostomatid ciliates, Loxophyllum choii nov. spec. and L. shini nov. spec., collected from inshore waters and a shrimp-culturing pond near Qingdao (Tsingtao), China, were investigated using live observations and the protargol-impregnation method. L. choii is distinguished from its congeners by the presence of conspicuous warts and prominent spines along the dorsal margin. L. shini is identified by a combination of characters including the small body size, the presence of two macronuclear nodules and the evenly distributed extrusomes whose tips protrude from the surface along both margins.     

Two new marine pleurostomatid ciliates from China,Amphileptus gui nov. spec. and Amphileptus yuianus nov. spec. (Ciliophora,Pleurostomatida)

The morphology and infraciliature of two pleurostomatid ciliates, Amphileptus gui nov. spec. and A. yuianus nov. spec., collected from mariculture ponds near Qingdao (Tsingtao), China, were investigated using living observations and the protargol impregnation method. These new species are distinguished from their congeners by a combination of characters including their marine habitat and the presence of an apical group of densely packed extrusomes. Amphileptus gui nov. spec. differs from A. yuianus nov. spec. mainly in the number of contractile vacuoles (3–7 vs. 1), the shape of extrusomes (thin bar-like vs. clavate), and the number of left and right somatic kineties (7–11 and 37–50 vs. 4 and 18–22).     

Morphological studies on two marine colepid ciliates from Qingdao, China, Nolandia orientalis spec. nov. and Pinacocoleps similis (Kahl, 1933) comb. nov. (Ciliophora, Colepidae)

Recent studies have revealed that the “lower” marine ciliates are far more diverse than previously suspected. During a survey on the ciliate fauna in coastal waters of Qingdao, northern China, we have isolated about 30 new or poorly known taxa. In the present study two colepid species are investigated, Nolandia orientalis spec. nov. and Pinacocoleps similis (Kahl, 1933) comb. nov. (basionym: Coleps similis Kahl, 1933). Their morphology and infraciliature are documented based on living observations and silver impregnations. The new species Nolandia orientalis differs from the type species N. nolandi mainly in the structure of tier plates. The structure of the tier plates was also the basis for transferring Coleps similis Kahl, 1933 to the genus Pinacocoleps and for three further new combinations: Pinacocoleps heteracanthus (Noland, 1937) comb. nov. (basionym: Coleps heteracanthus Noland, 1937), P. spiralis (Noland, 1937) comb. nov. (basionym Coleps spiralis Noland, 1937) and Pinacocoleps arenarius (Bock, 1952) comb. nov. (basionym: Coleps arenarius Bock, 1952).     

Amphileptus aeschtae nov. spec. and Amphileptus eigneri nov. spec. (Ciliophora, Pleurostomatida), two new marine pleurostomatid ciliates from China

The morphology and infraciliature of two pleurostomatid ciliates, Amphileptus aeschtae nov. spec. and Amphileptus eigneri nov. spec., collected from shrimp-culturing ponds of the Bohai Sea, China, were investigated using live observations and the protargol impregnation method. The new species A. aeschtae is identified by the presence of 200-300 macronuclear nodules and several contractile vacuoles along the ventral side of the cell. A. eigneri differs from its congeners, inter alia, by the marine habitat, the presence of many contractile vacuoles along the ventral margin and the number of somatic kineties on both sides. Loxophyllum ozakii Shigematsu, 1953 is transferred to Kentrophyllum.     

Pelagostrobilidium neptuni (Montagnes and Taylor, 1994) and Strombidium biarmatum nov. spec. (Ciliophora, Oligotrichea): phylogenetic position inferred from morphology, ontogenesis, and gene sequence data

Morphological data from life, protargol impregnation, and scanning electron microscopy were combined with genetic data not only to describe the marine plankton ciliates Pelagostrobilidium neptuni (Montagnes and Taylor, 1994) Petz, Song, and Wilbert, 1995 and Strombidium biarmatum nov. spec., but also to elucidate their phylogenetic relationships. Additionally, the ontogenesis of P. neptuni was studied and the diagnosis of the genus Pelagostrobilidium was improved due to further data from the newly affiliated species P. epacrum (Lynn and Montagnes, 1988) nov. comb. (basionym: Strobilidium epacrum Lynn and Montagnes, 1988). The phylogenetic analysis of the small subunit ribosomal RNA genes matched the morphologic and ontogenetic assigning of P. neptuni to the choreotrichid family Strobilidiidae. The considerable genetic distance of d = 0.074 between P. neptuni and Strobilidium caudatum corroborated the morphological differences and thus the maintenance of the genus Pelagostrobilidium. Strombidium biarmatum nov. spec. is a typical member of the genus, except for the two types of extrusomes ("trichites"): ~12 × 0.5 μm, needle-shaped ones attached anterior to the girdle kinety and ~6 × 0.5 μm, rod-shaped ones at the distal end of the intermembranellar ridges. Its flask-shaped resting cysts have several strong spines. In accordance with the morphologic data, S. biarmatum is placed within the order Oligotrichida by gene sequence analysis. The great genetic distances within the oligotrichids support the diversity found in morphologic and ontogenetic studies.     

Notes on Soil Ciliates (Protozoa, Ciliophora) from The Netherlands, with Description of Keronopsis schminkei nov. spec. and Apobryophyllum schmidingeri nov. spec

Fifty-six ciliate taxa, including three new species, were found in two soil samples from the Hoge Veluwe National Park in The Netherlands. A literature search showed that The Netherlands, Belgium and Denmark are terra incognita with respect to soil ciliates: only about 100 species have been recorded. Likely, a much greater number, including many undescribed species, can be found on more detailed investigations. Two of the three new species are described in detail. Keronopsis schminkei nov. spec. differs from the congeners by the nuclear apparatus and cirral pattern. Keronopsis wetzeli?Wenzel, 1953 is neotypified with the Austrian population described by Berger and Foissner (1987). Apobryophyllum schmidingeri differs from the congeners by body shape, the macronucleus pattern (many nodules), the arrangement of the extrusomes, and various morphometric features. Scanning electron micrographs and protargol preparations of Enchelys polynucleata confirm earlier transmission electron microscopic data on the occurrence of oralized somatic monokinetids and the lack of a circumoral kinety. Extrusome length and morphology of the resting cysts are rather different in various populations of E. polynucleata, indicating high genetic diversity (subspecies?).     

Morphological description of three marine ciliates (Ciliophora, Scuticociliatia), with establishment of a new genus and two new species

Three marine scuticociliates, Falcicyclidium fangi nov. gen., nov. spec., Falcicyclidium atractodes nov. spec., and Cristigera media Kahl, 1928 were investigated using live observation and silver impregnation methods. The genus Falcicyclidium is distinguished by the combination of: (i) dorsoventrally flattened body, (ii) hook-like (falciform) paroral membrane, (iii) anterior end of paroral membrane posterior to anterior end of membranelle 1, and (iv) multiple caudal cilia. Falcicyclidium fangi nov. spec., the type of the new genus, can be recognized by the combination of its large size, extremely dorsoventrally flattened (3:1) body, consistently 10 somatic kineties, and the broad, elongate buccal area occupying 60% of the body length. Falcicyclidium atractodes nov. spec. is mainly characterized by a unique spine projecting from both the anterior and posterior end. The uncommon form, Cristigera media is redescribed based on the population from Qingdao, the statistic data and additional features, especially the morphology of the living cells, are documented.     

Three New Loxophyllum Species (Ciliophora: Pleurostomatida) from China with a Brief Review of the Marine and Brackish Loxophyllum Species

Recent studies indicate that there is a high diversity of pleurostomatid ciliates in the coastal waters of China. Here, three new congeners of Loxophyllum, L. caudatum sp. n., L. rugosum sp. n., and L. chinense sp. n., are described following observations of live cells and protargol‐impregnated specimens. All three species usually have two macronuclear nodules and prominent warts along the dorsal margin formed by clustered extrusomes. In addition, L. caudatum sp. n. is characterized by its long conspicuous tail, dot‐like cortical granules, 4 or 5 left and 9 or 10 right kineties, and a single subterminal contractile vacuole. Loxophyllum rugosum sp. n. is distinguished by possessing three prominent ridges on the left side, 7–11 right and 5–7 left kineties. Loxophyllum chinense sp. n. is characterized by having several contractile vacuoles distributed along the ventral margin, 13–18 right and 6–8 left kineties. The small subunit ribosomal DNA (SSU rDNA) sequence similarities among six congeners range from 96.46% to 99.94%. Phylogenetic trees based on the SSU rDNA sequences indicate that all Loxophyllum spp. form a well‐supported monophyletic group. A brief review of the marine and brackish Loxophyllum species is supplied and one new combination, Litonotus multiplicatus (Kahl 1931) comb. n. (basionym Loxophyllum multiplicatum Kahl 1931), and one new name, Litonotus dragescoi nom. n. (basionym L. fasciolatus Dragesco 1966), are suggested.     

Morphology and Phylogeny of Three Trachelocercid Ciliates,with Description of a New Species,Trachelocerca orientalis spec. nov. (Ciliophora,Karyorelictea)

Three trachelocercid ciliates, Trachelocerca orientalis spec. nov., Prototrachelocerca fasciolata (Sauerbrey, 1928) Foissner, 1996 and Tracheloraphis huangi Xu et al., 2011, isolated from marine coastal habitats at Qingdao, China, were taxonomically studied using observation in vivo and silver staining methods. The new species T. orientalis spec. nov. can be recognized by the combination of its size (600–1,200 μm in vivo), 15–21 somatic kineties and about 13 groups of macronuclear nodules forming a strand and the colorless globular cortical granules. Together with the sequence data of the small subunit ribosomal RNA (SSU rRNA) gene, the information of a new isolate of P. fasciolata and three populations of T. huangi is also documented based on the present work. According to the molecular data, the phylogeny of three species is estimated and the analyses show that they are all found within the trachelocercid assemblage though T. huangi does not cluster with its congeners but with Trachelocerca species. Nonetheless, the monophyly of Trachelocerca is not rejected by the approximately unbiased test (p = 0.345 > 0.05), while that of Tracheloraphis is not confirmed (p = 0.0002 < 0.05).     

Re-establishment of the cyrtophorid genus Coeloperix Deroux,nov. gen., with a description of Coeloperix sleighi nov. spec. (Protozoa,Ciliophora, Cyrtophorida)

The cyrtophorid genus Coeloperix, which has remained invalid for over 20 years, is re-established. This taxon is characterized by Lynchellids without podites on the ventral side; somatic kineties making no noticeable naked gap between left and right areas; pre- and post-oral kineties completely separated; two terminal fragments; perioral kineties consisting of one continuous anterior and two detached posterior rows; with cross-striated band around perimeter between ventral and dorsal surfaces. Based on this definition, two nominal species formerly placed in the invalid genus have been included again in Coeloperix: Coeloperix dirempta (Deroux, 1970) nov. comb. [synonym: Lynchella dirempta; Deroux, 1970], C. aspidisciformis (Kahl, 1933) nov. comb. [syn. Lynchella aspidisciformis; Kahl, 1933]. Another two morphotypes C. eforiana (Tucolesco, 1962) nov. comb. [syn. Lynchella eforiana; Tucolesco, 1962] and C. lynchelliformis (Borror, 1972) nov. comb. [syn. Chlamydodon lynchelliformis; Borro, 1972] have been transferred into the new genus. The morphology of living cells and infraciliature of a new species, C. sleighi nov. spec., isolated from the coastal area of China, have been investigated. It is diagnosed by: size about 40×30 μm in vivo; consistently 4 preoral and 15–16 postoral kineties; 12–16 nematodesmata; cross-striated band with two separations in the equatorial area; 3–4 (usually 3) finger-like tentacles on the ventral side; macronucleus ellipsoidal; two contractile vacuoles diagonally located; marine habitat.     

Morphology and Phylogeny of Two Novel Pleurostomatids (Ciliophora,Litostomatea), Establishing a New Genus

Pleurostomatida Schewiakoff, 1896 is a cosmopolitan order of ciliates. In the present study, we investigated two new pleurostomatid species, Apolitonotus lynni gen. et sp. nov. and Protolitonotus clampi sp. nov., with state‐of‐the‐art methods. Apolitonotus lynni lacks its oral extrusomes and its right kineties form an anterior semi‐suture near the dorsal margin. Based on these two features, the new genus Apolitonotus was established within the Protolitonotidae Wu et al., 2017. Protolitonotus clampi differs from its congeners by its size of 80–130 × 15–30 μm, 4–6 left, and 9–11 right kineties, extrusomes arranged along the oral slit, and two macronuclear nodules. Because Litonotus antarcticus possesses an anterior semi‐suture and oral extrusomes, it was transferred to the genus Protolitonotus, becoming P. antarctius comb. nov. (basionym Litonotus antarcticus Song and Wilbert, 2002). Phylogenetic analyses based on SSU rDNA sequences suggest a sister group relationship of P. clampi and the family Kentrophyllidae, and A. lynni is adelphotaxon to Litonotus gracilis, both within the order Pleurostomatida. Based on the new findings, an improved diagnosis for Protolitonotus was also provided.     

Establishment of a new amphileptid genus, Apoamphileptus nov. gen. (Ciliophora, Litostomatea, Pleurostomatida), with description of a new marine species, Apoamphileptus robertsi nov. spec. from Qingdao, China

A new pleurostomatid genus Apoamphileptus is described, which is diagnosed as: Belonging to the Amphileptidae with spica on right side; on each side of the cell, a single perioral kinety, which encircles the cytostome and does not extend to the posterior end of the cell; somatic kineties of both sides near ventral margin shortened and forming a postoral suture; two to several extra fragments with densely arranged dikinetids located in anterior portion of left side. As the type species, the morphology and infraciliature of Apoamphileptus robertsi nov. spec., isolated from a shrimp-farming pond near Qingdao (Tsingtao), China, have been investigated using living observations and the protargol silver impregnation method. The diagnosis for this new species is: Apoamphileptus 90-180 x 30-60 microm in vivo, body elongate pyriform-shaped and slightly flattened; with one cross-striated band along the cytostome; 2-6 (generally 4) large macronuclear nodules, one micronucleus; 33-43 right somatic kineties; left side 6-8 kineties; two extra anterior fragments on left side; about 13 contractile vacuoles dispersed throughout whole body; extrusomes absent or not recognizable; marine habitat. Some morphologically related morphotypes are discussed and tabulated. Regarding the pattern of infraciliature and other morphological features, the well-described fresh-water species, Amphileptus claparedii Stein, 1867 is believed to be a member of this new genus, hence a new combination is suggested: Apoamphileptus claparedii (Stein, 1867) nov. comb.     

Synchroma grande spec. nov. (Synchromophyceae class. nov., Heterokontophyta): an amoeboid marine alga with unique plastid complexes

Chromist algae including the Heterokontophyta are supposed to have evolved monophyletically by secondary endosymbiosis from a eukaryotic host cell that engulfed a eukaryotic red alga. The red algal endosymbiont was then reduced to a secondary plastid surrounded by four enveloping membranes. On the basis of the amoeboid marine alga Synchroma grande gen. et spec. nov., the Synchromophyceae are described here as a new class of Heterokontophyta. Their taxonomic position is characterized by 18S rRNA and rbcL gene phylogenies, morphology, and pigment composition. The so far unique feature of the Synchromophyceae is the occurrence of conspicuous chloroplast complexes representing multiplastidic red secondary endosymbionts. In these remarkable secondary endosymbionts, several primary chloroplasts are aggregated in a common periplastidial compartment and are collectively enveloped by an additional outer membrane pair. The discovery of this novel plastid morphology is highly relevant for research on algal evolution and is discussed in terms of the postulated monophyletic origin of Chromista.     

Methanocorpusculaceae fam. nov., represented by Methanocorpusculum parvum,Methanocorpusculum sinense spec. nov. and Methanocorpusculum bavaricum spec. nov.

Two new methanogenic bacteria, Methanocorpusculum sinense spec. nov. strain DSM 4274 from a pilot plant for treatment of distillery wastewater in Chengdu (Province Sichuan, China), and Methanocorpusculum bavaricum spec. nov. strain DSM 4179, from a wastewater pond of the sugar factory in Regensburg (Bavaria, FRG) are described. Methanocorpusculum strains are weakly motile and form irregularly coccoid cells, about 1 μm in diameter. The cell envelope consists of a cytoplasmic membrane and a S-layer, composed of hexagonally arranged glycoprotein subunits with molecular weights of 90000 (Methanocorpusculum parvum), 92000 (M. sinense), and 94000 (M. bavaricum). The center-to-center spacings are 14.3 nm, 15.8 nm and 16.0 nm, respectively. Optimal growth of strains is obtained in the mesophilic temperature range and at a pH around 7. Methane is produced from H₂/CO₂, formate, 2-propanol/CO₂ and 2-butanol/CO₂ by M. parvum and M. bavaricum, whereas M. sinense can only utilize H₂/CO₂ and formate. Growth of M. sinense and M. bavaricum is dependent on the presence of clarified rumen fluid. The G+C content of the DNA of the three strains is ranging from 47.7–53.6 mol% as determined by different methods. A similar, but distinct polar lipid pattern indicates a close relationship between the three Methanocorpusculum species. The polyamine patterns of M. parvum, M. sinense and M. bavaricum are similar, but distinct from those of other methanogens and are characterized by a high concentration of the otherwise rare 1,3-diaminopropane. Quantitative comparison of the antigenic fingerprint of members of Methanocorpusculum revealed no antigenic relationship with any one of the reference methanogens tested. On the basis of the distant phylogenetic position of M. parvum and the data presented in this paper a new family, the Methanocorpusculaceae fam. nov., is defined.     

Molecular Phylogeny of an Indian Population of Kleinstyla dorsicirrata (Foissner, 1982) Foissner et al., 2002. comb. nov. (Hypotrichia,Oxytrichidae): an Oxytrichid with Incomplete Dorsal Kinety Fragmentation

Kleinstyla dorsicirrata (Foissner, 1982) Foissner et al., 2002. comb. nov. (basionym: Gastrostyla dorsicirrata) is a slightly flexible oxytrichid, measuring about 88–115 × 27–46 μm in life and possesses cortical granules. Kleinstyla dorsicirrata is the only oxytrichid known so far with incompletely fragmented dorsal kinety. Morphological and morphogenetic data recognise K. dorsicirrata as nonstylonychine oxytrichid. Molecular phylogeny of an Indian population was inferred using 18S rRNA gene sequences and was examined with respect to oxytrichids exhibiting variation in dorsal kinety fragmentation. Kleinstyla dorsicirrata clusters with Oxytricha lanceolata; this proximity is quite significant as both show deviation from typical oxytrichid fragmentation of dorsal kinety. Molecular phylogeny of Indian population confirms its nonstylonychine oxytrichid status.     

Morphological and Molecular Characterization of Some Peritrichs (Ciliophora: Peritrichida) from Tank Bromeliads, Including Two New Genera: Orborhabdostyla and Vorticellides

Using standard methods, we studied the morphology and 18S rDNA sequence of some peritrich ciliates from tank bromeliads of Costa Rica, Jamaica, and Ecuador. The new genus Orborhabdostyla differs from Rhabdostyla by the discoidal macronucleus. Two species from the literature and a new species from Ecuadoran tank bromeliads are combined with the new genus: O. previpes (Claparède and Lachmann, 1857) nov. comb., O. kahli (Nenninger, 1948) nov. comb., and O. bromelicola nov. spec. Orborhabdostyla bromelicola is a slender species with stalk-like narrowed posterior half and operculariid/epistylidid oral apparatus. An epistylidid relationship is also suggested by the gene sequence. Vorticella gracilis, described by Dujardin (1841) from French freshwater, belongs to the V. convallaria complex but differs by the yellowish colour and the number of silverlines. The classification as a distinct species is supported by the 18S rDNA, which differs nearly 10% from that of V. convallaria s. str. Based on the new data, especially the very stable yellowish colour, we neotypify V. gracilis with the Austrian population studied by Foissner (1979). Vorticella gracilis forms a strongly supported phyloclade together with V. campanula, V. fusca and V. convallaria, while Vorticellides astyliformis and Vorticella microstoma branch in a separate, fully-supported clade that includes Astylozoon and Opisthonecta. The new genus Vorticellides comprises five small (usually < 60 μm), barrel-shaped species with two epistomial membranes: V. aquadulcis (Stokes, 1887) nov. comb., V. astyliformis (Foissner, 1981) nov. comb., V. platysoma (Stokes, 1887) nov. comb., V. infusionum (Dujardin, 1841) nov. comb., and V. (Spinivorticellides) echini (King, 1931) nov. comb. Two of these species are redescribed in the present study: V. astyliformis and V. aquadulcis, which is neotypified with a Costa Rican population. Pseudovorticella bromelicola nov. spec. differs from the congeners by the location of the two contractile vacuoles and the number of silverlines.     

Spathidium seppelti foissneri nov. subspec., Spathidium simplinucleatum nov. stat., and Dileptus americanus Kahl, 1931, one new and two poorly known soil gymnostome ciliates from soils of Slovakia

The morphology and infraciliature of three soil gymnostome ciliates, Spathidium seppelti foissneri nov. subspec., Spathidium simplinucleatum nov. stat., and Dileptus americanus, collected from Slovakia, were investigated using live observation and protargol impregnation. S. seppelti foissneri is distinguished from its congeners by a combination of characters including: distinctly spatulate shape with convex oral bulge; 25 ellipsoidal, scattered macronuclear nodules; an average of 23 ciliary rows, 3 anteriorly differentiated to form a dorsal brush occupying 25% of the body length; and rod-shaped to slightly ellipsoidal extrusomes measuring about 5 x 0.5 microm. S. simplinucleatum is about 110 x 50 microm in vivo, characterized by solid, concave oral bulge, with the impression of doubled oral bulge in right side, macronuclear tortuous strand, usually 30 ciliary rows, 3 anteriorly differentiated to form a dorsal brush, and about 7 microm long rod-shaped extrusomes. S. simplinucleatum is highly variable in body size and length of monokinetidal bristle tail. Dileptus americanus is about 300 x 50 microm in vivo and differs from its congeners by a combination of characters including two macronuclear segments with a single micronucleus in between, two contractile vacuoles in dorsal side of trunk, two size types of rod-shaped extrusomes, a proboscis which occupies about 37% of body length, circular oral opening, and an average of 22 ciliary rows, of which up to 4 are differentiated to form a dorsal brush.     

Rhodospirillum salexigens,spec. nov., an obligatory halophilic phototrophic bacterium

The name Rhodospirillum salexigens, spec. nov., was proposed for the strain WS 68, isolated by W. R. Sistrom at the Oregon coast from salt water. The spiral-shaped phototrophically or chemotrophically growing, salt demanding bacterium contains intracytoplasmic membranes arranged parallel to the cytoplasmic membrane. Bacteriochlorophyll a and spirilloxanthin are the major pigments. Growth occurs between 20 and 45°C at a neutral pH. The DNA base composition was 64 mol % guanine plus cytosine. The cell wall contains peptidoglycan and proteins but no glycolipids.