Phylogenetic and haematological implications of differences in the morphology of the heterophil nucleus in reptiles

The shape of the nucleus of blood heterophils was examined in 67 reptilian species. Two distinct forms of nucleus were found, either unlobed or lobed. In all species of Chelonia, Crocodylia and Serpentes examined the heterophil nucleus was unlobed whereas, in the Lacertilia, unlobed nuclei were found in the anguinomorph families Anguidae, Helodermatidae and Varanidae but lobed nuclei occurred in the heterophils of the scincomorph families Scincidae, Cordylida, Teiidae and Lacertidae and in the more primitive lacertilian families Iguanidae, Agamidae, Gekkonidae and Chamaeleonidae. These differences have been related to possible phylogenetic, morphological and haematological factors.     

A family of short retroposons (Squam1) from squamate reptiles (Reptilia: Squamata): Structure,evolution, and correlation with phylogeny

Sequences of the SINE family specific to squamate reptiles have been isolated from the genomes of lacertid lizards and sequenced. These retroposons, which we called Squam1, are 360–390 bp long and contain a region similar to the tRNA gene sequence at the 5’ end. This family has also been detected in representatives of other reptile families (varanids, iguanids (Anolis), gekkonids, and snakes), being absent from the genomes of crocodiles as well as amphibians, birds, and mammals. The primary structures of Squam1 copies have been comprehensively analyzed and compared with GenBank sequences. The genomes of most taxa contain two to three SINE subfamilies with specific diagnostic features in their primary structures. Individual similarity between the copies within each taxon is about 85%, with intrageneric similarity being only slightly higher. A comparison of consensus sequences between different lizard families has shown that Squam1 may be a convenient phylogenetic marker for this group of reptiles, having a number of both apomorphic and more or less pronounced synapomorphic features. By this criterion, snakes slightly differ from lizards but obviously belong to the same clade. However, they show no special affinity to varanids as the putative closest relatives of snakes, compared to other lizards.     

Incubation time in reptilian eggs

An allometric analysis of reptilian incubation time was performed. Incubation time increased with increasing egg mass (allometric exponent = 0.14, r²= 0.31). However, significant heterogeneity was found within the Reptilia for this character. If periods of developmental arrest are excluded the orders Crocodylia, Testudinata, and the suborder Serpentes have the shortest incubation times and the lizards the longest. Significant differences within lizard families were also observed (Iguanidae, Agamidae, Gekkonidae, and Lacertidae have shorter incubation times than the Varanidae and Teiidae). Preliminary analyses indicate the heterogeneity in incubation time observed within the Squamata is correlated with differences in brain mass; this is similar to findings for mammals. The variation in incubation time indicates the existence of differences in growth rates in reptilian groups and suggests a partial explanation for the observed distribution of viviparity within the Squamata.     

Survey of the reptilian fauna of the Kingdom of Saudi Arabia. V. The lizard fauna of Turaif region

Turaif area located in the Northern border region of Saudi Arabia is one of the most important regions of the Kingdom. This work was proposed to throw light on the diversity of lizard fauna investigated through the collection and subsequent identification of specimens from different localities of Turaif region of Kingdom of Saudi Arabia. Sixteen species of lizards belonging to 5 families (Agamidae, Gekkonidae, Lacertidae, Scincidae and Varanidae) were recorded. Lacertidae was the most common family. Three species of lizards namely Acanthodactylus orientalis, Acanthodactylus scutellatus and Acanthodactylus grandis were reported for the first time in the Turaif region of Saudi Arabia. The geographical distribution of the collected species within this province was mapped.     

Microstructure of scales in selected lizard species

In the present study, it was hypothesized that micromorphology of the surface of many lizard scales appears to mimic the topography of the habitat in which they live. Many authors have suggested that the microstructure of the superficial surface of scales have undergone important adaptations and have functional value in lizards. In this study, we investigated the variation and adaptation of the micromorphology and microstructure of the superficial surface of the dorsal and ventral scales from the mid-body region of Stellagama stellio (Agamidae), Stenodactylus petrii (Gekkonidae), Acanthodactylus boskianus (Lacertidae), Eumeces schneideri (Scincidae), Trachylepis quinquetaeniata (Scincidae), Scincus scincus (Scincidae), Varanus griseus (Varanidae), Chameleo chameleon (Chamaeleonidae). Skin specimens were prepared and analyzed using scanning electron microscopy. The dorsal and ventral scale surfaces had microstructure in the studied species and they exhibited unique patterns that somewhat resembled the topography of the microhabitats in which they lived. Similarity was detected in the three most related species, those having a common family, Scincidae. Ecomorphological relationships were detected between the dorsal and ventral scale microstructures and microhabitats. We conclude that environmental factors have observable influences on the microstructure of lizard scales.     

The Ecological Associations of Surface-Dwelling Lizards in Qom Province in the Northwest of Central Plateau of Iran

We used pitfall trapping to investigate the effects of elevation, plant density and soil structure on species diversity and the impact of these habitat factors on lizard habitat selectivity in the Qom Province in the Central Plateau of Iran. From a total of 12 1-ha plots, we captured 363 individuals of 15 species of lizards (six species of Lacertidae, five species of Agamidae, two species of Gekkonidae, one species of Varanidae and one species of Scincidae). A generalized linear model (GLM) determined that elevation was the most important factor impacting species diversity. The highest species diversity was at the intermediate elevation (1289 m). Abundance of 6 out of 15 species showed strong relationships with some habitat factors. These relationships were demonstrated by habitat selectivity index (Ivlev''s index). Our result supports other surveys that showed that elevation plays an important role in determining lizard species diversity.     

The structure of the skull and jaw adductor musculature in the Gekkota, with comments on the phylogenetic relationships of the Xantusiidae (Reptilia: Lacertilia)

The skull and trigeminal jaw adductor musculature of the lizard families Gekkonidae, Pygopodidae and Xantusiidae are described. The external jaw adductor shows a different structure in the Gekkonidae and Pygopodidae than is observed in other lizards, approached only by the Xantusiidae and Feyliniidae. Paedomorphosis seems to be involved in the differentiation of the jaw adductor musculature in the Gekkonidae. The Gekkonidae and Pygopodidae may be hypothesized to form a monophyletic group, the Gekkota, on the basis of numerous synapomorphies. Within the Gekkota, the Pygopodidae are the sister-group of the Gekkonidae and retain some plesiomorphous features which are absent in the latter. The Xantusiidae share few synapomorphies with the Gekkota on the one hand, and some with scincomorph lizards on the other, especially with the Lacertidae.     

Mite pockets of lizards, a possible means of reducing damage by ectoparasites

Many scattered lizard groups have small skin invaginations in such places as the neck, axilla, groin and postfemoral region. These frequently contain feeding chiggers (the larvae of trombiculid mites) which, in general, are much commoner on species with pockets than on those without. Mite pockets appear to have evolved many times, being found in at least five families (Iguanidae, Chamaeleonidae, Gekkonidae, Lacertidae, Scincidae) and are most abundant in warm areas that are not extremely dry. They are present in newly hatched animals and embryos of viviparous forms and so cannot be produced in direct response to the mites. Typically, the epidermis of infested pockets is hyperplastic and resilient, rapidly repairing damage caused by feeding mites, and the dermis contains dense concentrations of lymphoid cells. It is suggested that mite pockets have evolved in forms prone to trombiculid infestation and ameliorate the damage that this causes by concentrating chiggers in places that are equipped to minimize the harm they do.     

Mitochondrial DNA sequences of five squamates: phylogenetic affiliation of snakes.

Complete or nearly complete mitochondrial DNA sequences were determined from four lizards (Western fence lizard, Warren's spinytail lizard, Terrestrial arboreal alligator lizard, and Chinese crocodile lizard) and a snake (Texas blind snake). These genomes had a typical gene organization found in those of most mammals and fishes, except for a translocation of the glutamine tRNA gene in the blind snake and a tandem duplication of the threonine and proline tRNA genes in the spinytail lizard. Although previous work showed the existence of duplicate control regions in mitochondrial DNAs of several snakes, the blind snake did not have this characteristic. Phylogenetic analyses based on different tree-building methods consistently supported that the blind snake and a colubrid snake (akamata) make a sister clade relative to all the lizard taxa from six different families. An alternative hypothesis that snakes evolved from a lineage of varanoids was not favored and nearly statistically rejected by the Kishino-Hasegawa test. It is therefore likely that the apparent similarity of the tongue structure between snakes and varanoids independently evolved and that the duplication of the control region occurred on a snake lineage after divergence of the blind snake.     

Complete mitochondrial genomes of three lizard species and the systematic position of the Lacertidae (Squamata)*

Complete mitochondrial (mt) genomes were sequenced from representatives of three lacertid lizards: Podarcis siculus, Podarcis muralis and Phoenicolacerta kulzeri. In all three genomes the arrangement of the 22 tRNAs, the two rRNAs and the 13 protein‐coding genes conforms to the common vertebrate arrangement. The phylogenetic position of Lacertidae within the order Squamata was determined through sequence analyses based on large sections of complete mt genomes. The number of nucleotide sites used for tree construction was 9234 when outgroup taxa were included, and 10 499 when only Squamata were compared. The phylogenetic analyses confirmed the sister group relationship between Lacertidae and Amphisbaenia as previously proposed on the basis of molecular data. Additionally, Bayesian analysis revealed a well supported clade comprising (Gekkonidae (Lacertidae + Amphisbaenia)), which is not in accordance with the traditional morphological view and most of the previous molecular studies. It confirms, however, the close relationship between Gekkonidae and Amphisbaenia as revealed in a recent study based on complete mt genomes from a smaller number of taxa. Intra‐ and intergeneric sequence comparisons of six commonly used marker genes showed rather high levels of divergence within the Lacertidae. In the intrageneric comparison the control region proved to be considerably more conserved than the protein coding genes.     

An assemblage of early Oligocene lizards (Squamata) from the locality of Boutersem (Belgium), with comments on the Eocene–Oligocene transition

A diverse, new lizard assemblage from the early Oligocene of Belgium is described. The Boutersem railway local fauna is the most species‐rich lizard assemblage yet reported from the European early Oligocene. Four lizard taxa are present: Lacertidae, Anguidae, Scincoidea and Platynota. One new species is described, Folisaurus boutersemensis sp. nov . This fauna provides new insight into the profound turnover that took place during the Eocene/Oligocene boundary in Europe. The new fauna confirms a marked decrease in diversity across the Eocene/Oligocene boundary. Two groups encountered in the European late Eocene became extinct (Iguanidae*, Glyptosaurinae). Estimates of species‐level extinctions range up to 80%. These estimates include members of virtually all the families present in the late Eocene. The relative importance of climate change and biotic interactions in controlling this pattern is discussed, and negative interactions between lizards and new carnivorous mammals are favoured. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2009, 155 , 148–170.     

Evolutionary divergence of the ribosomal internal transcribed spacer 2 (ITS2) in lizards

During the pre-rRNA cleavage pathway, the excision of ITS2, a eukaryotic specific insertion, remains the most elusive processing step, even in yeast. Comparison of the ITS2 sequences in different organisms permits to reveal conservative, presumably functionally important elements as well as obtain new information about ITS2 divergence in evolution. We have cloned and sequenced the ITS2 of three lizard species, Agama caucasia (Agamidae), Darevskia armeniaca and Lacerta strigata (Lacertidae) and detected in them a set of specific and conservative structural elements employing secondary structure consensus for vertebrate ITS2. Furthermore, we have performed an alignment and comparative analysis of the ITS2 sequences for the two lizards families. It enables us to propose that modern lizard species formation in evolution was accompanied by ITS2 duplication in the rDNA of their common progenitors.     

Mitochondrial genomes from major lizard families suggest their phylogenetic relationships and ancient radiations

In placental mammals and birds, molecular data generally support a view that they diverged into their ordinal groups in good response to mid-Cretaceous continental fragmentations. However, such divergence patterns have rarely been studied for reptiles for which phylogenetic relationships among their major groups have not yet been established molecularly. Here, I determined complete or nearly complete mitochondrial DNA sequences from seven lizard families and reconstructed phylogenetic relationships between major lizard families. When snakes were included, maximum likelihood analysis did not support a morphological view of the snakes-varanoids affinity, although several other competing hypotheses on the position of snakes still cannot be discriminated presumably due to extremely long branches of the snake lineages. I also conducted clock-free Bayesian analyses to show that divergence times between major lizard families were centered in Triassic-Jurassic times. Thus, lizards include much deeper divergences than the mammals and birds and they appear to have already radiated into various families prior to the mid-Cretaceous major continental fragmentation.     

Amphibians and squamates from the Neogene Siwalik beds of Jammu and Kashmir, India

The Neogene Siwalik deposits of Jammu Province (India) have yielded amphibians and squamates. The collection includes the first amphibians and the first colubroid snakes from the Siwalik Group. Amphibians comprise only anurans: a possible Ranidae and one, or perhaps two, non-ranid frogs Squamates include one lizard,Varanus sp. (Varanidae), whereas snakes are represented by three taxa:Acrochordus dehmi (Acrochordidae), an indeterminate Colubridae, and a snake that is either a Colubridae or an Elapidae.Varanus sp. andA. dehmi have been yielded by the Upper Miocene Ramnagar Member, whereas the anurans and colubroid snakes come from the Upper Pliocene Labli Member. These taxa are indicative of aquatic palaeoenvironment.     

Temperature tolerances of Southeast Australian reptiles examined in relation to reptile thermoregulatory behaviour and distribution

Summary The Critical temperatures (defined as the upper and lower limits at which the animal can still right itself) were determined for 29 lizard species (13 genera) and four snake species (four genera) of Southeast Australia. In addition to these Critical temperatures, acclimation of the Critical temperatures and also some lethal temperatures were recorded for several of these species. The mean summer Critical Minimum values ranged between 2.2 and 9.8°C. Thigmotherms (Gekkonidae, Lygosominae, Elapidae) and posturing heliotherms (Agamidae, Scincinae, Varanidae) generally had high Critical Minimum values and the shuttling heliotherms (Lygosominae, Elapidae) had the lowest values. The rate of acclimation of the Critical Minimum of ten lizard species was similar and complete acclimation took place within ten days. Following acclimation the final or ultimate Critical Minimum of some species fell below the body freezing point of-0.52°C and locomotion could occur while the lizard was supercooled. Mean summer Critical Maximum values ranged between 37.0 and 44.8°C. Determination of the Lethal Minimum temperatures by continuously cooling the specimens was complicated by the fact that supercooling occurred followed by nucleation or sudden freezing of the body tissues. The Lethal Minimum was best determined by holding specimens at different constant temperature levels then calculating the body temperature at which the species could survive for an indefinite time period. It is concluded, from the data presented in this paper, that if environmental temperatures were to limit the distribution of reptiles then the Critical Minimum level would have more ecological significance than the Critical Maximum.     

The complete mitochondrial genome of the green lizard Lacerta viridis viridis (Reptilia: Lacertidae) and its phylogenetic position within squamate reptiles

For the first time the complete mitochondrial genome was sequenced for a member of Lacertidae. Lacerta viridis viridis was sequenced in order to compare the phylogenetic relationships of this family to other reptilian lineages. Using the long-polymerase chain reaction (long PCR) we characterized a mitochondrial genome, 17,156 bp long showing a typical vertebrate pattern with 13 protein coding genes, 22 transfer RNAs (tRNA), two ribosomal RNAs (rRNA) and one major noncoding region. The noncoding region of L. v. viridis was characterized by a conspicuous 35 bp tandem repeat at its 5' terminus. A phylogenetic study including all currently available squamate mitochondrial sequences demonstrates the position of Lacertidae within a monophyletic squamate group. We obtained a narrow relationship of Lacertidae to Scincidae, Iguanidae, Varanidae, Anguidae, and Cordylidae. Although, the internal relationships within this group yielded only a weak resolution and low bootstrap support, the revealed relationships were more congruent with morphological studies than with recent molecular analyses.     

The latest Early Pleistocene amphibians and reptiles from Kaiafas (Greece) and the first record of fossil Ophiomorus (Squamata,Scincidae)

Together with the rest of the Balkan Peninsula, Greece acted as a refuge for thermophilic amphibians and reptiles during the Quaternary Glaciations. In this work we provide new herpetological data on the latest Early Pleistocene locality of Kaiafas, in western Peloponnese. The site yielded one indeterminate salamandrid urodelan (Salamandridae indet.), one tree frog (Hyla gr. H. arborea), one indeterminate testudinid (Testudinidae indet.), at least two lacertid lizards (Lacertidae indet. A and B), one scincid lizard (Ophiomorus sp.), one anguid lizard (Pseudopus sp.), and one indeterminate “colubrine” snake (“Colubrinae” indet.). This assemblage is indicative of a surrounding environment with water bodies, wooded areas, and possibly loose soils with rocks and stones. In spite of being based on few remains, the study of the amphibians and reptiles from Kaiafas resulted in the identification of the first fossil of Ophiomorus known worldwide. Moreover, the two lacertid taxa displayed very peculiar morphological features which are either previously unknown or rare in that clade.     

湖南省永州都庞岭自然保护区爬行动物群落结构的调查研究

本文报道了湖南永州都庞岭自然保护区的４１ 种爬行动物, 它们隶属２ 目,１２ 科, 其中龟鳖目３ 科（平胸龟科、龟科、鳖科） ３ 种; 有鳞目中的蜥蜴亚目５ 科（鬣蜥科、壁虎科、石龙子科、蜥蜴科、双足蜥科） ８ 种;蛇亚目４ 科（闪鳞蛇科、游蛇科、眼镜蛇科、蝰科） ３０ 种。保护区内的爬行动物有１２－２％ 属广布动物, ８７－８％ 属东洋界种类。     

Evolutionary divergence of ribosomal internal transcribed spacer 2 in lizards

Internal transcribed spacers 1 and 2 (ITS1 and ITS2) are known to play an important role in rRNA maturation, yet the mechanism of their action is still not completely understood. Comparison of the ITS1 and ITS2 nucleotide sequences for various organisms reveals conserved regions, which are potentially involved in rRNA biogenesis, and yields new information about the evolutionary divergence of the corresponding region of the genome. The rDNA fragments containing ITS2 were amplified, cloned, and sequenced for three lizard species: Darevskia armeniaca, Lacerta strigata (Lacertidae), and Agama caucasia (Agamidae). The lizard ITS2 sequences were compared with their counterparts from other organisms and proved to contain not only universally conserved elements characteristic of the consensus secondary structure of vertebrate ITS2, but also lizard-specific regions. Comparison of the ITS2 size and the distribution of homologous regions for the two lizard families made it possible to assume that evolution of the modern species involved duplication of ITS2 in the genome of their common ancestor.