The abundance of ground-dwelling invertebrates in a Victorian forest affected by ‘dieback’(Phytophthora cinnamomi) disease

Abstract Phytophthora cinnamomi (cinnamon fungus) is a pathogenic soil fungus that infects plant communities along the southeastern coast of Australia and the southwestern corner of Western Australia. Infection of native plant communities with P. cinnamomi regularly leads to dramatic changes in both the structural and the floristic characteristics of these communities. This study aimed to assess the effect of P. cinnamomi induced changes in plant community attributes upon the abundance and diversity of invertebrates in an area of open forest in the Brisbane Ranges, Victoria. Pitfall trapping was conducted continuously for 1 week within each season over a 3 year period. Invertebrates were sorted to order level, and abundances were compared between times (season and year) and infection status for taxa with normalized distributions (Coleoptera, Collembola, Dermaptera and ants). Non-parametric comparisons were made for other groups (Aranae, Blattodea, Diptera, Hemiptera, Orthoptera, ant ‘morpho-species’ and unidentified larvae) to assess differences on the basis of infection status. Significant differences on the basis of infection were uncommon and, where identified, elevated abundances were more commonly observed at sites infected by P. cinnamomi. Consistent temporal effects (season and year) were observed in normalized data sets. Abundances both within individual taxa and from pooled counts were generally weakly associated with ground-level habitat features. Overall, the impact of P. cinnamomi on vegetative structure and floristics was not reflected in different abundances of ground-dwelling invertebrates.     

A model of the species rank-abundance relation for a community in an open habitat

A mathematical model is proposed to describe the relationship between the abundance and the rank of species in order from the most abundant to the least in a community in an open habitat. This model is derived as a corollary of a species-area equation (Kobayashi , 1975) which could be expected in the case where the individuals of each species are uniformly distributed over a habitat area. Numerical simulation reveals that a rank-abundance curve for a universe results in different species-area or species-individual curves according to the spatial distribution of individuals, and that the relative abundance of each species in a sample varies with sample size unless the spatial distribution of individuals is uniform. A species-individual curve obtained bySanders 's (1968) rarefaction method agrees with that observed actually only for the spatially uniform distribution. Change in the pattern of rank-abundance curve with species diversity and with sample size is discussed in relation to the present model.     

Genetic structure of an expanding Armillaria root rot fungus (Armillaria ostoyae) population in a managed pine forest in southwestern France

The Landes de Gascogne forest (southwestern France) is the largest maritime pine ( Pinus pinaster ) plantation in Europe. Armillaria root disease ( Armillaria ostoyae ) has been reported since the early 1920s in the coastal area (western sector), but its incidence over the last 20 years has increased in the eastern sector. We investigated the genetic structure of the A. ostoyae population in this forest, focusing particularly on geographical differentiation potentially indicative of disease expansion in this area. In total, 531 isolates obtained from mycelial fans on symptomatic trees or undecayed stumps in 31 different disease foci were genotyped at five microsatellite loci. In 20 of these disease foci, a single genotype dominated, reflecting a predominantly clonal local spread of A. ostoyae . By contrast, at the regional scale, A. ostoyae probably spreads mostly via basidiospores (sexual spores), as no genotype common to several disease foci was identified. The absence of a clear pattern of isolation by distance may indicate either substantial gene flow or stochastic colonisation independent of spatial distance. The gradient of genetic diversity from the coast inwards and the greater genetic divergence of the eastern disease foci are consistent with the expansion of the A. ostoyae population from the coast eastwards.     

Identical genotypes of an ericoid mycorrhiza-forming fungus occur in roots of Epacris pulchella (Ericaceae) and Leptospermum polygalifolium (Myrtaceae) in an Australian sclerophyll forest

Assemblages of fungi associated with roots of cooccurring Epacris pulchella ( Ericaceae ) and Leptospermum polygalifolium ( Myrtaceae ) seedlings at a sclerophyll forest site in New South Wales, Australia, were investigated by direct DNA extraction and analysis of rRNA gene internal transcribed spacer (ITS) products by denaturing gradient gel electrophoresis (DGGE) and terminal restriction fragment length polymorphism (T-RFLP) analyses. While ordination of the DGGE data suggested that the assemblages did not differ significantly between the two plant taxa, T-RFLP data provided marginal statistical support for the presence of different assemblages. Fungi isolated from roots of both plants were identified by ITS sequence comparisons largely as ascomycetes, several of which had close sequence identity to Helotiales ericoid mycorrhizal (ERM) fungi. One isolate morphotype from E. pulchella had close sequence similarity to ectomycorrhizal fungi in the Cenococcum geophilum complex, and neighbour-joining analysis grouped this strongly with other Australian C. geophilum- like sequences. Distribution of genotypes of an ERM Helotiales ascomycete in root systems of the two plant taxa was also investigated using inter-simple sequence repeat (ISSR)-PCR. Nineteen ISSR genotypes were identified, two of which were present in roots of both plant taxa. The results are discussed in the context of potential mycelial connections between Ericaceae and non- Ericaceae plants.     

Convergent signs of degradation in both the capacity and the quality of an essential fish habitat: state of the Seine estuary (France) flatfish nurseries

The Bay of Seine is a potentially important nursery ground, especially for flatfish. This area, however, is also strongly anthropogenically influenced. A composite approach was chosen to compare the flatfish nursery function of the Seine estuary with other coastal and estuarine areas and to determine the impact of anthropogenic disturbances. It emerges that alteration of the nursery function in the Seine estuary is related to the loss of nursery habitat and to a lower quality of the residual surfaces. These observations stressed the importance of habitat destruction and decreased quality of remaining habitat for fish stocks renewal.     

Nesting habitat use and partitioning of three sympatric ninespine sticklebacks (genus <Emphasis Type="Italic">Pungitius</Emphasis>): implications for reproductive isolation

The nest site characteristics and distribution patterns of nests of three sympatric ninespine sticklebacks, the brackish- and fresh-water types and Pungitius tymensis, were investigated in the Shiomi River, eastern Hokkaido, Japan. In this river, most of the males of the brackish-water type were found to build their nests in the lower reach with higher salinity (mean 13.5‰) and water temperature (mean 13.3°C), whereas the males of the freshwater type and P. tymensis built their nests in the upper reach with lower salinity (mean 0.6 and 0.8‰, respectively) and water temperature (both mean 11.3°C). The ranges of their nesting areas, however, overlapped within the river, because the nests of the brackish-water type were widely distributed in the river. A comparison of the nest site characteristics in the area where nest overlapped indicated that there were no significant differences for all of five characteristics (the distance from the nest to the shore, the distance from the nest to the bottom, the distance to the nearest nest, the nest density and the amount of cover around the nest). Using canonical discriminant analysis, the nests of the three sticklebacks could not be distinguished using the five nest characteristics. These results suggest that habitat isolation through physical factors functions as an important mechanism of reproductive isolation between the brackish-water type and the other two sticklebacks.     

Caught in the act: pollination of sexually deceptive trap-flowers by fungus gnats in Pterostylis (Orchidaceae)

Background and Aims Pterostylis

is an Australasian terrestrial orchid genus of more than 400 species, most of which use a motile, touch-sensitive labellum to trap dipteran pollinators. Despite studies dating back to 1872, the mechanism of pollinator attraction has remained elusive. This study tested whether the fungus gnat-pollinated Pterostylis sanguinea secures pollination by sexual deception.

Methods

The literature was used to establish criteria for confirming sexual deception as a pollination strategy. Observations and video recordings allowed quantification of each step of the pollination process. Each floral visitor was sexed and DNA barcoding was used to evaluate the degree of pollinator specificity. Following observations that attraction to the flowers is by chemical cues, experimental dissection of flowers was used to determine the source of the sexual attractant and the effect of labellum orientation on sexual attraction. Fruit set was quantified for 19 populations to test for a relationship with plant density and population size.

Key Results

A single species of male gnat (Mycetophilidae) visited and pollinated the rewardless flowers. The gnats often showed probing copulatory behaviour on the labellum, leading to its triggering and the temporary entrapment of the gnat in the flower. Pollen deposition and removal occurred as the gnat escaped from the flower via the reproductive structures. The labellum was the sole source of the chemical attractant. Gnats always alighted on the labellum facing upwards, but when it was rotated 180 ° they attempted copulation less frequently. Pollination rate showed no relationship with orchid population size or plant density.

Conclusions

This study confirms for the first time that highly specific pollination by fungus gnats is achieved by sexual deception in Pterostylis. It is predicted that sexual deception will be widespread in the genus, although the diversity of floral forms suggests that other mechanisms may also operate.     

Enhancing Biological Control of Leafrollers (Lepidoptera: Tortricidae) by Sowing Buckwheat (Fagopyrum esculentum) in an Orchard

Two successive trials were carried out in stone-fruit and apple orchards in the summers of 1994-95 and 1995-96 respectively to determine the effect of floral resources on leafroller parasitoid numbers. Orchards were divided into eight blocks, each containing one replicate of a control and a treatment. The treatment had buckwheat (Fagopyrum esculentum Moench) drilled (as 3 m 2 m plots) in the centre of each replicate, while the control areas were kept weed free with herbicides. Catches of parasitoids in yellow pan traps were compared between the control and treatment areas. In the first trial, on average 10 times more parasitoids were captured in the buckwheat plots than in the controls. However, few of the parasitoids were natural enemies of leafrollers; the catches were dominated by Anacharis sp., a parasitoid of the brown lacewing ( Micromus tasmaniae Walker), itself a beneficial insect. Leafrollers were very rare in this orchard, which explains the absence of their parasitoids in the traps. In the second season, with the experiment conducted in an orchard with a history of leafroller populations, higher numbers of Anacharis sp. were again caught in buckwheat than in control plots. However, significantly higher (34% compared with 20%) levels (P< 0.05) of parasitism (by Dolichogenidea tasmanica (Cameron)) of released leafroller larvae were observed in buckwheat plots than in controls, despite the small plot size. Also, higher numbers of D. tasmanica were captured in yellow sticky traps 2 m above the buckwheat than in the equivalent position in the control plots.     

A huge,undescribed soil ciliate (Protozoa: Ciliophora) diversity in natural forest stands of Central Europe

We investigated 12 natural forest stands in eastern Austria for soil ciliate diversity, viz., eight beech forests and two lowland and Pinus nigra forests each. The stands span a wide range of climatic (e.g., 543–1759 mm precipitation, 160–1035 m above sea-level) and abiotic (e.g., pH 4–7.4) factors. Samples were taken twice in autumn and late spring and analysed with the non-flooded Petri dish method. Species were identified in vivo, in silver preparations, and in the scanning electron microscope. A total of 233 species were found, of which 30 were undescribed, a surprising number showing our ignorance of soil ciliate diversity, even in Central Europe. Species number varied highly from 45 (acidic beech on silicate) to 120 (floodplain forest) and was strongly correlated with pH and overall habitat quality, as measured by climate, the C/P quotient (ratio of r-selected colpodean and k-selected polyhymenophorean ciliates), and the proportion of mycophagous ciliate species; multivariate analysis showed further important variables, viz., the general nutrient status (glucose, nitrogen, C/ N ratio) and microbial (urease) activity. The highest species number occurred in one of the two floodplain soils, supporting the intermediate disturbance hypothesis. The three main forest types could be clearly distinguished by their ciliate communities, using similarity indices and multidimensional scaling. Individual numbers varied highly from 135^–1 (lowland forest) to 10,925 ml^–1 (beech on silicate) soil percolate and showed, interestingly, a weak correlation with soil protozoan phospholipid fatty acids. Eight of the 30 new species found and a forgotten species, Arcuospathidium coemeterii (Kahl 1943) nov. comb., are described in detail, as examples of how species were recognized and soil protozoan diversity should be analyzed: Latispathidium truncatum bimicronucleatum, Protospathidium fusioplites, Erimophrya sylvatica, E. quadrinucleata, Paragonostomum simplex, Periholosticha paucicirrata, P. sylvatica, and Australocirrus zechmeisterae.     

The distribution of the Rocky Mountain tailed frog (Ascaphus montanus) in relation to the fluvial system: implications for management and conservation

The mating, egg-laying, and larval development of tailed frogs occur in dynamic mountain streams. During the lengthy (up to 5 years) aquatic residency these species are vulnerable to channel disturbances that can be exacerbated by land uses. Researchers have highlighted specific tailed frog habitat associations but never in the context of fluvial system processes. Based on an extensive regional study with a watershed-wide sampling strategy, we demonstrate that the Rocky Mountain tailed frog (Ascaphus montanus) is limited to contributing basins of roughly 0.3–100 km² in size, with peak numbers in basins up to 35 km². We conclude that the primary determinant of tailed frog distribution patterns in a watershed is basin area, a proximate variable for channel process domain and regional stream discharge: tailed frogs are adapted to cascade and step-pool channel morphologies that characterize these small basins, presumably because they afford more bedform stability and pore-space refugia than do smaller, colluvial headwaters, or larger, floodplain-forming plane bed and pool-riffle bedforms of mainstem rivers. Secondarily, climate and physiography interact to influence occurrence and abundance at the watershed level by controlling such variables as runoff, water temperature, and sedimentation regime. This point has important management implications because it forces us to recognize that in complex ecosystems, wildlife habitat associations are contingent on site-specific interactions amongst fluvial system control variables: significance levels of any one variable to tailed frog distribution will not necessarily be consistent among basins. The study clearly shows that case studies can produce conflicting results when they lack a process-based understanding of ecological response.     

Characterization of Fe(III) sequestration by an analog of the cytotoxic siderophore brasilibactin A: implications for the iron transport mechanism in mycobacteria

Mycobacteria such as M. tuberculosis represent a significant health concern throughout much of the developing world. In mycobacteria and other pathogenic bacteria, an important virulence factor is the ability of the bacterium to obtain iron from its host. One means of obtaining iron is through the use of siderophores. Brasilibactin A is a membrane bound siderophore produced by Nocardia brasiliensis with structural similarity to the mycobactin class of siderophore in mycobacteria. A characterization of the protonation constants and Fe(III) affinity of a water soluble Brasilibactin A analog (Bbtan) has been performed. Using protonation constants and competition with EDTA, the stability constant of the 1?:?1 Fe(III)-Bbtan complex was found to be log β(110) = 26.96. The pFe of Bbtan is 22.73, somewhat low for a proposed siderophore molecule. The redox potential of the Fe-Bbtan complex was found to be -300 mV vs. NHE, very high for an iron-siderophore complex. The combination of relatively low complex stability and ease of iron reduction may play a crucial role in the mechanism of mycobactin siderophore-mediated iron uptake in mycobacteria and related organisms.     

Suppression of methanogenesis by dissimilatory Fe(III)-reducing bacteria in tropical rain forest soils: implications for ecosystem methane flux

Tropical forests are an important source of atmospheric methane (CH₄), and recent work suggests that CH₄ fluxes from humid tropical environments are driven by variations in CH₄ production, rather than by bacterial CH₄ oxidation. Competition for acetate between methanogenic archaea and Fe(III)‐reducing bacteria is one of the principal controls on CH₄ flux in many Fe‐rich anoxic environments. Upland humid tropical forests are also abundant in Fe and are characterized by high organic matter inputs, steep soil oxygen (O₂) gradients, and fluctuating redox conditions, yielding concomitant methanogenesis and bacterial Fe(III) reduction. However, whether Fe(III)‐reducing bacteria coexist with methanogens or competitively suppress methanogenic acetate use in wet tropical soils is uncertain. To address this question, we conducted a process‐based laboratory experiment to determine if competition for acetate between methanogens and Fe(III)‐reducing bacteria influenced CH₄ production and C isotope composition in humid tropical forest soils. We collected soils from a poor to moderately drained upland rain forest and incubated them with combinations of ¹³C‐bicarbonate, ¹³C‐methyl labeled acetate (¹³CH₃COO^?), poorly crystalline Fe(III), or fluoroacetate. CH₄ production showed a greater proportional increase than Fe²⁺ production after competition for acetate was alleviated, suggesting that Fe(III)‐reducing bacteria were suppressing methanogenesis. Methanogenesis increased by approximately 67 times while Fe²⁺ production only doubled after the addition of ¹³CH₃COO^?. Large increases in both CH₄ and Fe²⁺ production also indicate that the two process were acetate limited, suggesting that acetate may be a key substrate for anoxic carbon (C) metabolism in humid tropical forest soils. C isotope analysis suggests that competition for acetate was not the only factor driving CH₄ production, as ¹³C partitioning did not vary significantly between ¹³CH₃COO^? and ¹³CH₃COO^?+Fe(III) treatments. This suggests that dissimilatory Fe(III)‐reduction suppressed both hydrogenotrophic and aceticlastic methanogenesis. These findings have implications for understanding the CH₄ biogeochemistry of highly weathered wet tropical soils, where CH₄ efflux is driven largely by CH₄ production.     

Effects of Anisops sardea (Hemiptera: Notonectidae) on oviposition habitat selection by mosquitoes and other dipterans and on community structure in artificial pools

We investigated the effects of the predatory backswimmer, Anisops sardea, on oviposition habitat selection of mosquitoes and other dipterans, and on community structure in experimental pools. We predicted that those dipteran species whose larvae were shown to be highly vulnerable to predation by Anisops would avoid Anisops pools when choosing an oviposition site. We established the following treatments in plastic tubs: (1) Control (without Anisops); (2) Free Anisops (ten Anisops within pool but not caged); (3) Caged Anisops (ten Anisops in cage). The pools were open to colonization by insects. We added resting stages of crustaceans and first instar larvae of the mosquitoes Culiseta longiareolata and Culex laticinctus. Among the dipteran species, Culiseta longiareolata, Culex laticinctus, Chironomus riparius (Chironomidae) and Forcipomyia sp. (Ceratopogonidae), only Culisetalarvae were highly vulnerable to predation. As predicted, based on larval vulnerability, Culiseta, but not the other species, avoided Anisops pools when ovipositing. Free Anisops reduced taxon richness. This reduction resulted largely from the elimination of the cladoceran Ceriodaphniasp. and Culiseta in most free Anisops pools. Thus, Anisops sardea structures the community, both by a behavioral response of prey to its presence and by consumption of prey.     

Beyond habitat requirements: individual fine-scale site fidelity in a colony of the Galapagos sea lion (<Emphasis Type="Italic">Zalophus wollebaeki</Emphasis>) creates conditions for social structuring

Site fidelity has been widely discussed, but rarely been related explicitly to a species’ social context. This is surprising, as fine-scale site fidelity constitutes an important structural component in animal societies by setting limits to an individual’s social interaction space. The study of fine-scale site fidelity is complicated by the fact that it is inextricably linked to patterns of habitat use. We here document fine-scale site fidelity in the Galapagos sea lion (Zalophus wollebaeki) striving to disentangle these two aspects of spatial behaviour. Regardless of sex and age, all individuals used small, cohesive home ranges, which were stable in size across the reproductive and non-reproductive season. Home ranges showed a large individual component and did not primarily reflect age- or sex-specific habitat requirements. Site specificity could be illustrated up to a resolution of several metres. Long-term site fidelity was indicated by home range persistence over 3 years and the degree of site fidelity was unaffected by habitat, but showed seasonal differences: it was lower between reproductive and non-reproductive periods than between reproductive seasons. We further examined static and social interaction within mother–offspring pairs, which constitute a central social unit in most mammalian societies. Regardless of the occupied habitat type, adult females with offspring had smaller home range sizes than non-breeding females, demonstrating the importance of spatial predictability for mother–offspring pairs that recurrently have to reunite after females’ foraging sojourns. While social interaction with the mother dropped to naught in both sexes after weaning, analysis of static interaction suggested female-biased home range inheritance. Dispersal decisions were apparently not based on habitat quality, but determined by the offspring’s sex. We discuss the implication of observed fine-scale site fidelity patterns on habitat use, dispersal decisions and social structure in colonial breeding pinnipeds.     

Influence of an overstorey tree (Prosopis glandulosa) on associated shrubs in a savanna parkland: implications for patch dynamics

The arborescent legume, honey mesquite (Prosopis glandulosa), appears to play a central role in patch dynamics of southern Texas savannas by modifying soils and microclimate and by facilitating the ingress, establishment and/or growth of shrubs in its understorey. As an indirect test for the occurrence and persistence of facilitation in mature shrub clusters (patches), we examined the gas exchange, water relations and production of associated shrubs growing in patches where a Prosopis overstorey was present and in patches where Prosopis had succumbed to natural mortality. Surface (0–10 cm) soils associated with shrub patches were enriched in total [N] and [C] compared to soils of neighboring herbaceous zones. However, there were no detectable differences in soil [N] or [C] in patches with and without Prosopis. Foliar [N] and biomass of various shrub species were also statistically comparable for patches with and without Prosopis. These results are in accordance with other studies that indicate the nutrient legacy associated with Prosopis occupation of a patch may persist for decades after its demise. In comparison to plants growing in the absence of Prosopis, leaf water potentials (predawn and midday), and net photosynthesis and water vapor conductance (morning and midday) of outer-canopy sunlit leaves over an annual growth cycle were comparable for two common evergreen shrubs, Zanthoxylum fagara and Berberis trifoliolata, growing in patches with a live Prosopis. These findings indicate that the presence of Prosopis was not enhancing the growth or activity of mature understorey shrubs; facilitation may, therefore, be important only during early stages of cluster development. In addition, we found no indication that the loss of Prosopis has initiated a downward phase in a cyclic succession of patch initiation, growth and death. Rather, the understorey shrubs appear to be able to maintain growth and productivity in the absence of a Prosopis overstorey, and may, therefore, represent persistent components of woody patches on these savanna landscapes.     

Spider biodiversity potential of an ungrazed and a grazed inland salt meadow in the National Park 'Neusiedler See-Seewinkel' (Austria): implications for management (Arachnida: Araneae)

To assess the biodiversity potential of an ungrazed and a grazed inland salt meadow in the Seewinkel (Eastern Austria), spider assemblages were recorded by pitfall trapping for 1 year. Both species assemblages consisted, to a large extent, of rare species of conservation interest. The species assemblage of the grazed site was dominated by Pardosa agrestis, but highly specific halotopobiontic species also occurred in higher numbers. Halotolerant species were also present in the ungrazed meadow, but their individual number was much lower. The species composition of this site reflects the more balanced microclimatical situation of the high sward. Comparison of the two assemblages with 207 other meadow spider assemblages of Central Europe shows a separated position, especially of the grazed site assemblage. High similarities with assemblages of meadows with a similar vegetation structure indicate a high importance of management. Considering the high proportion of rare species on both sites, the best management of the salt meadow and pan shores of the Seewinkel should combine areas of light grazing with ungrazed areas. However, the proportion of these parts and the intensity of grazing still remains to be determined by quantitative experiments.