Biodegradation of polyvinyl alcohol by a mixed microbial culture

A mixed culture capable of degrading 1 g l⁻¹ polyvinyl alcohol (PVA) completely was screened from sludge samples at Pacific Textile Factory, Wuxi, China. This mixed culture had stronger capability of degrading PVA with low polymerization and high saponification than degrading PVA with high polymerization and low saponification. Inorganic nitrogen source was more suitable for the mixed culture to grow and degrade PVA than organic nitrogen source. Microorganisms and relative abundance of this mixed culture were explored by terminal restriction fragment length polymorphism (T-RFLP). Small PVA molecules were detected in cell extracts of the mixed culture. This indicated that PVA degradation in the mixed culture was in fact a combined action of extracellular and intracellular enzymes. Two strains producing extracellular PVA-degrading enzyme were isolated from the mixed culture. They could individually degrade PVA1799 with polymerization of 1700 from initial average molecular weight 112,981 to 98,827 Da and 84,803 Da, respectively. However, only small amount of PVA124 in polymerization of 400 could be degraded by these two strains.     

Purification and properties of polyvinyl alcohol oxidase with broad substrate range obtained from Pseudomonas vesicularis var. povalolyticus PH

Extracellular PVA oxidase produced by Pseudomonas vesicularis var. povalolyticus PH was purified to homogeneity by ammonium sulphate fractionation followed by successive column chromatography, and a study made of its characteristics. The molecular weight of the purified enzyme was estimated to be 75,000 by gel filtration and 85,000 by SDS-PAGE, suggesting that it consists of monomeric protein. Its isoelectric point was 5.7. The purified enzyme was colourless, and contained one atom of iron per molecule. It exhibited a broad pH activity profile with maximum activity at pH 10.0, and was stable between pH 6.0 and 10.0. The optimum temperature for enzyme activity was 40°C, with stability up to 45°C. The enzyme activity was inhibited strongly by Fe2+, Hg2+ and Sn2+, and weakly by Cu2+, EDTA, thiourea and IAA. The enzyme exhibited activity toward several secondary alcohols, suggesting that it was a secondary alcohol oxidase. In particular, the enzyme exhibited strong activity towards the larger secondary alcohols such as 2-octanol and 4-decanol, and relatively strong activity towards cyclohexanol and benzyl alcohol.     

Phenanthrene biodegradation by immobilized microbial consortium in polyvinyl alcohol cryogel beads

Removal of polycyclic aromatic hydrocarbons (PAHs), a group of widespread toxic compounds, has been one of the environmental issues in wastewater treatment systems for many years. In this study, biodegradation of phenanthrene (PHE), as a model contaminant, by a microbial consortium entrapped in polyvinyl alcohol (PVA) cryogel prepared by freeze-thaw method was investigated. The effect of inoculum size (300–900 mg of cell dry weight per liter) and initial PHE concentration (100–2000 ppm) as well as bead cell density (5 and 10 mg ml⁻¹) on PHE biodegradation by freely suspended cell (FC) and immobilized cell (IC) systems in aqueous phase was examined. Results showed that although both IC and FC systems were capable of complete removal of 100 and 250 ppm of initial PHE (as sole carbon and energy sources), incomplete PHE removals were observed at higher initial PHE concentrations up to 2000 ppm after 7 days. IC system resulted in the maximum PHE removal of 400 ppm at initial PHE concentration of 750 ppm and inoculum size of 600 mg l⁻¹, while under these conditions FC system removed 310 ppm of PHE. Moreover, bead cell density was shown to affect the performance of IC system, with the lower density of 5 mg ml⁻¹ leading to a higher PHE removal due to the enhanced transport phenomena in the culture. Additionally, a correlation was proposed to predict PHE biodegradation at a range of initial PHE concentrations.     

Cell surface structure enhancing uptake of polyvinyl alcohol (PVA) is induced by PVA in the PVA-utilizing <Emphasis Type="Italic">Sphingopyxis</Emphasis> sp. strain 113P3

Polyvinyl alcohol (PVA)-utilizing Sphingopyxis sp. 113P3 (reidentified from Sphingomonas sp. 113P3) removed almost 0.5% PVA from culture supernatants in 4 days. Faster degradation of 0.5% PVA was performed by the periplasmic fraction. The average molecular size of PVA in the culture supernatant or cell-bound PVA was gradually shifted higher, suggesting that lower molecular size molecules are degraded faster. Depolymerized products were found in neither the culture supernatant nor the cell-bound fraction; however they were recovered from the periplasmic fraction. As extracellular or cell-associated PVA oxidase activity was almost undetectable in strain 113P3, degradation of PVA must be performed by periplasmic PVA dehydrogenase after uptake into the periplasm. Following the consumption of PVA, a dent appeared on the cell surface on day 2 and increased in size and depth for 4 days and was maintained for 8 days. Ultrastructural change on the cell surface was only observed in PVA medium, but not in nutrient broth (NB), suggesting that the change is induced by PVA. Fluorescein-4-isothiocyanate-labeled PVA was bound more to cells grown in PVA than to cells grown in NB. No binding was found with PVA-grown cells treated with formaldehyde. Thus, a dent on the cell surface seems to be related to the uptake of PVA.     

A modified method for isolating poly(vinyl alcohol)-degrading bacteria and study of their degradation patterns

An addition of catalase or peroxidase into an agar plate containing poly(vinyl alcohol) (PVA), was effective for the isolation of PVA-degrading microorganisms. A Gram-negative bacterium, strain TK-2 (-group of proteobacteria), rapidly degraded a high molecular weight PVA to low molecular weight material after 1 day thereby producing oligomers of PVA as shown by gel permeation chromatography. Conversely, Sphingomonas strain TJ-7 did not produce any PVA oligomers, suggesting that the strain TJ-7 degraded PVA from the terminal ends of the molecules, whereas the strain TK-2 cleaved PVA at random.     

Chromate reduction by Microbacterium liquefaciens immobilised in polyvinyl alcohol

A polyvinyl alcohol-based immobilisation technique has been utilised for entrapping the newly-isolated chromate-reducing bacterium, Microbacterium liquefaciens MP30. Three immobilisation methods were evaluated: PVA-nitrate, PVA-borate and PVA-alginate. Chromate reduction was studied in batch and continuous-flow bioreactors, where the beads maintained integrity during continuous operation. PVA-borate and PVA-alginate cell beads showed a higher rate and extent of chromate reduction than PVA-nitrate cell beads in batch experiments. With the former 100 M Cr(VI) was removed within 4 days, while only 40 M Cr(VI) was removed using the latter, and with no increase in Cr(VI) removal subsequently. Cell activity was maintained during immobilisation but the rate of Cr(VI) removal by immobilised cells was only half that of an equivalent mass of free cells. Using PVA-alginate cell beads in a continuous-flow system, chromate removal was maintained at 90–95% from a 50 M solution over 20 days without signs of bead breakdown.     

蜡样芽孢杆菌聚乙烯醇脱氢酶的表达及酶学特性

【背景】聚乙烯醇脱氢酶(polyvinyl alcohol dehydrogenase,PVADH)能够使聚乙烯醇(polyvinyl alcohol,PVA)氧化脱氢,在PVA的生物降解过程中起到重要作用。【目的】从PVA降解菌株蜡样芽孢杆菌DG01中获取pvadh基因,实现PVADH在毕赤酵母中的异源表达并探究其对不同型号PVA的降解特异性,为PVADH在PVA实际降解中的应用提供指导。【方法】通过反转录扩增技术获得长度为1 965 bp的pvadh基因片段,构建pPIC9K-cpvadh重组表达质粒并在毕赤酵母GS115中实现异源表达,甲醇诱导表达蛋白,进行分离纯化后对其酶学性质及降解特异性进行研究。【结果】最佳发酵条件下PVADH粗酶液酶活达到54.55 U/mL。经分离纯化后表达蛋白PVADH的比酶活为173.42 U/mg,分子量为67.1 kDa,等电点为6.06,该酶最适作用温度为41℃,最适作用pH值为7.5,在27-32℃、pH 7.0-8.0条件下酶的半衰期超过4 h,1 mmol/L的Ca2+对酶活力有激活作用。PVADH分别作用于PVA1788、PVA1799...     

聚乙烯醇高效降解菌的筛选及降解特性研究

以聚乙烯醇为唯一碳源从环境中筛选获得了高效降解聚乙烯醇的微生物菌株XT11,初步鉴定为假单胞菌属(Pseudomonas sp.).对菌株Pseudomonas XT11的生长过程及PVA降解过程进行了研究,发现该菌株在54 h内可将1 g/L的聚乙烯醇(PVA)降解.同时研究了温度、pH值及酵母膏浓度对该菌株降解PVA的影响,结果表明其最适温度、pH值和酵母膏浓度分别为30℃、7.0和0.5 g/L.研究了PVA浓度对PVA降解率的影响,发现随着PVA浓度的增大,PVA的降解率降低.     

聚乙烯醇高效降解菌的筛选及降解特性研究

以聚乙烯醇为唯一碳源从环境中筛选获得了高效降解聚乙烯醇的微生物菌株XT11, 初步鉴定为假单胞菌属(Pseudomonas sp.)。对菌株Pseudomonas XT11的生长过程及PVA降解过程进行了研究, 发现该菌株在54 h内可将1 g/L的聚乙烯醇(PVA)降解。同时研究了温度、pH值及酵母膏浓度对该菌株降解PVA的影响, 结果表明其最适温度、pH值和酵母膏浓度分别为30℃、7.0和0.5 g/L。研究了PVA浓度对PVA降解率的影响, 发现随着PVA浓度的增大, PVA的降解率降低。     

Production and recovery of an enzyme fromPseudomonas vesicularis var.povalolyticus PH that degrades polyvinyl alcohol

A PVA-degrading enzyme was produced byPseudomonas vesicularis var.povalolyticus PH and accumulated intracellularly when grown in nutrient medium including tryptone and yeast extract without PVA. The internal enzyme activity increased with cell growth and was maximal when growth was maximal, whereas, external activity continued to increase. It was presumed that the enzyme secretion was induced by the presence of PVA in the culture medium. It was established that crude enzyme can be effectively recovered from the cell by osmotic shock treatment with sucrose or NaCl.     

In-vitro degradation of starch granules isolated from spinach chloroplasts

The initial reactions of transitory starch degradation in Spinacia oleracea L. were investigated using an in-vitro system composed of native chloroplast starch granules, purified chloroplast and non-chloroplast forms of phosphorylase (EC 2.4.1.1) from spinach leaves, and -amylase (EC 3.2.1.1) isolated from Bacillus subtilis. Starch degradation was followed by measuring the release of soluble glucans, by determining phosphorylase activity, and by an electron-microscopic evaluation following deep-etching of the starch granules. Starch granules were readily degraded by -amylase but were not a substrate for the chloroplast phosphorylase. Phosphorolysis and glucan synthesis by this enzyme form were strictly dependent upon a preceding amylolytic attack on the starch granules. In contrast, the non-chloroplast phosphorylase was capable of using starch-granule preparations as substrate. Hydrolytic degradation of the starch granules was initiated at the entire particle surface, independently of its size. As a result of amylolysis, soluble glucans were released with a low degree of polymerization. When assayed with these glucans as substrate, the chloroplast phosphorylase form exhibited a higher apparent affinity and a higher reaction velocity compared with the non-chloroplast phosphorylase form. It is proposed that transitory starch degradation in vivo is initiated by hydrolysis; phosphorolysis is most likely restricted to a pool of soluble glucan intermediates.Abbreviations Glc1P Glucose 1-phosphate - Mes 2(N-morpholino)ethanesulfonic acid - Pi Orthophosphate     

Synthesis and degradation of alcohol dehydrogenase in wild-type and Adh-null activity mutants of Drosophila melanogaster

Both the amount and the size of alcohol dehydrogenase-like cross-reacting material was determined in 14 ethyl methanesulfonate (EMS)-induced alcohol dehydrogenase-null activity mutants. In 11 mutants cross-reacting material of the same apparent molecular weight as alcohol dehydrogenase was detected, while in 3 mutants no cross-reacting material was found. In all cases, the amount of cross-reacting material found in the mutants was lower than that in wild-type flies. High, intermediate, and low cross-reacting material-producing mutants showed similar initial rates of incorporation of labeled amino acid into alcohol dehydrogenase-like protein, presumably reflecting similar rates of synthesis. If the rate of synthesis of cross-reacting material is the same in the mutants as in the wild type, then the different levels of cross-reacting material must be due to different rates of degradation.Supported by NIH Grants GM-18254 and ES-01527 and DOE Contract EY-76-S-2965.     

Role of veratryl alcohol in lignin degradation by Phanerochaete chrysosporium

Several aromatic compounds increased initial lignin degradation rates in cultures of Phanerochaete chrysosporium. This activation was connected to increased H₂O₂ production and glucose oxidation rates. Veratryl alcohol, a natural secondary metabolite of P. chrysosporium, also activated the lignin-degrading system. In the presence of added veratryl alcohol the ligninolytic system appeared 6–8 h earlier than in reference cultures. This effect was only seen when lignin was added after the primary growth was completed because lignin itself also caused earlier appearance of the degradative system. In cultures which received no added lignin or veratryl alcohol the ligninolytic activity only appeared once the alcohol started to accumulate. The degradation patterns of veratryl alcohol and lignin were similar. The activity levels of lignin degradation and glucose oxidation could be regulated by veratryl alcohol concentration. It is suggested that either veratryl alcohol itself or a metabolite derived from it is actually responsible for the low levels of ligninolytic activity in glucose grown cultures.     

Detection of synergistic interactions of polyvinyl alcohol–cassava starch blends through DSC

The synergistic interaction of polyvinyl alcohol (PVOH) and cassava starch was studied by differential scanning calorimetry (DSC) method. Film of the PVOH–cassava starch blends were prepared by solution cast method. Originally, cassava starch film did not show presence of any endothermic peaks in DSC thermogram. However, after adding PVOH to cassava starch, the PVOH–cassava starch blend films showed obvious endothermic peaks with onset and end-point temperatures higher than neat PVOH film. In addition, the PVOH–cassava starch blends have experimental enthalpy of melting higher than theoretical values. This evidence shows that the interactions between PVOH and cassava starch molecules are extensively strong. Due to the synergistic interactions of PVOH and cassava starch, it is postulated that incorporation of 65–75 wt.% of PVOH in cassava starch blend has physical bonding equivalent to neat PVOH.     

The Preparation of Poly(A)±mRNA from the Hagfish Slime Gland

The isolation of translatable poly(A)^±mRNA from the slime glands of the Pacific hagfish, Eptatretus stouti, is not possible by the commonly used procedures because of the viscous slime that is formed when the contents of the glands are hydrated. This paper reports on a procedure developed to overcome this problem. Briefly, the tissue was powdered in liquid nitrogen, mixed with sodium lauroylsarcosine and proteinase K and lyophilized. The lyophilized powder was then mixed with 0.3 mm diameter glass beads, thoroughly ground and wetted with buffer and digested at 37°C. The RNA from the digest was recovered by ultracentrifugation through a CsCl cushion. Further purification of the RNA was accomplished by the usual methods with slight modifications.     

Anaerobic degradation of p-xylene in sediment-free sulfate-reducing enrichment culture

Anaerobic degradation of p-xylene was studied with sulfate-reducing enrichment culture. The enrichment culture was established with sediment-free sulfate-reducing consortium on crude oil. The crude oil-degrading consortium prepared with marine sediment revealed that toluene, and xylenes among the fraction of alkylbenzene in the crude oil were consumed during the incubation. The PCR-denaturing gradient gel electrophoresis (DGGE) analysis of 16S rRNA gene for the p-xylene degrading sulfate-reducing enrichment culture showed the presence of the single dominant DGGE band pXy-K-13 coupled with p-xylene consumption and sulfide production. Sequence analysis of the DGGE band revealed a close relationship between DGGE band pXy-K-13 and the previously described marine sulfate-reducing strain oXyS1 (similarity value, 99%), which grow anaerobically with o-xylene. These results suggest that microorganism corresponding to pXy-K-13 is an important sulfate-reducing bacterium to degrade p-xylene in the enrichment culture.     

Immobilization of Pseudomonas delafieldii with magnetic polyvinyl alcohol beads and its application in biodesulfurization

Pseudomonas delafieldii was immobilized in magnetic polyvinyl alcohol (PVA) beads using a hydrophilic magnetic fluid, which was prepared by a co-precipitation method. The beads had distinct super-paramagnetic properties and were compared with immobilized cells in non-magnetic PVA beads. Their desulfurizing activity was increased slightly from 8.7 to 9 mmol sulfur kg(-1) (dry cell) h(-1). The main advantages was that the magnetic immobilized cells maintain a high desulfurization activity and remain in good shape after 7 times of repeated use, while the non-magnetic immobilized cells could only be used for 5 times. Furthermore, the magnetic immobilized cells could be easily collected or separated magnetically from the biodesulfurization reactor.     

三酮类除草剂微生物降解的研究进展

三酮类除草剂是一类高效、广谱、高选择性的除草剂,能够有效地防除玉米地多种阔叶杂草和禾本科杂草。该类除草剂在土壤、水体中残留,易造成地表和地下水污染。有关研究表明,微生物降解有望成为解决该类除草剂残留的有效措施。本文分析了2种三酮类除草剂带来的生态效应,总结了已报道的微生物降解资源,简述了降解基因/酶的研究进展及可能的降解途径,为深入研究三酮类除草剂的生物降解提供一定的信息支撑。     

Anaerobic degradation of toluene by pure cultures of denitrifying bacteria

Several denitrifying Pseudomonas spp., isolated with various aromatic compounds, were tested for the ability to degrade toluene in the absence of molecular oxygen. Four out of seven strains were able to degrade toluene in the presence of N₂O. More than 50% of the ¹⁴C from ring-labelled toluene was released as CO₂, and up to 37% was assimilated into cell material. Furthermore it was demonstrated for two strains that they were able to grow on toluene as the sole carbon and energy source in the presence of N₂O. Suspensions of cells pre-grown on toluene degraded toluene, benzaldehyde or benzoate without a lag phase and without accumulation of intermediates. p-Cresol, p-hydroxybenzylalcohol, p-hydroxybenzaldehyde or p-hydroxybenzoate was degraded much slower or only after distinct lag times. In the presence of fluoroacetate [¹⁴C]toluene was transformed to [¹⁴C]benzoate, which suggests that anaerobic toluene degradation proceeds through oxidation of the methyl side chain to benzoate.     

Glass transition behavior of the vitrification solutions containing propanediol, dimethyl sulfoxide and polyvinyl alcohol

Knowledge of the glass transition behavior of vitrification solutions is important for research and planning of the cryopreservation of biological materials by vitrification. This brief communication shows the analysis for the glass transition and glass stability of the multi-component vitrification solutions containing propanediol (PE), dimethyl sulfoxide (Me₂SO) and polyvinyl alcohol (PVA) by using differential scanning calorimetry (DSC) during the cooling and subsequent warming between 25 and −150 °C. The glass formation of the solutions was enhanced by introduction of PVA. Partial glass formed during cooling and the fractions of free water in the partial glass matrix increased with the increasing of PVA concentration, which caused slight decline of glass transition temperature, T_g. Exothermic peaks of devitrification were delayed and broadened, which may result from the inhibition of ice nucleation or recrystallization of PVA.