Intermediacy of iridodial in the biosynthesis of some iridoid glucosides

Administration of MVA-[2-¹⁴C] to Lamium applexicaule and Deutzia crenata as well as of 11-hydroxyiridodial glucoside-[10-³H] and 7-deoxyloganic acid-[10-³H] to the former plant suggested that, in contrast to secoiridoid-indole alkaloids, iridoid glucosides such as ipolamiide, lamiide, lamioside, deutzioside and scabroside in these plants are biosynthesized via iridodial. Iridodial as a precursor for the biosynthesis of asperuloside was also suggested from the results of the administration of MVA-[2-¹⁴C] to Galium spurium var. echinospermon.     

The Site of the Inhibition of the Shikimate Pathway by Glyphosate: II. INTERFERENCE OF GLYPHOSATE WITH CHORISMATE FORMATION IN VIVO AND IN VITRO

In the presence of the nonselective herbicide glyphosate (N-[phosphonomethyl]glycine), buckwheat (Fagopyrum esculentum Moench) hypocotyls and cultured cells of Galium mollugo L. accumulate an organic acid, which was identified as shikimate by mass-spectroscopy of its methyl ester. After growth in 0.5 millimolar glyphosate for 10 days, G. mollugo cells contained shikimate in amounts of up to 10% of their dry weight. Synthesis of chorismate-derived anthraquinones in G. mollugo was blocked by glyphosate. Chorismate and o-succinylbenzoate (an anthraquinone precursor) alleviated the inhibition. The conclusion drawn from these experiments, that glyphosate inhibits a step in the biosynthetic sequence from shikimate to chorismate, was substantiated by the finding that glyphosate is a powerful inhibitor of the conversion of shikimate to chorismate in cell-free extracts from Aerobacter aerogenes 62-1.     

Iridoids from Galium mollugo

From Galium mollugo, two new iridoids, gardenosidic acid and 10-hydroxymorroniside as well as 10-hydroxyloganin have been isolated, along with seven known iridoids, secogalioside, asperuloside, asperulosidic acid, daphylloside, monotropein, scandoside and scandoside methyl ester. 10-Hydroxyloganin, a compound which was previously considered to be the key biosynthetic intermediate of secoiridoids, was obtained for the first time from a natural source.     

Enzymic synthesis of o-succinylbenzoyl-CoA in cell-free extracts of anthraquinone producing Galium mollugo L. cell suspension cultures

o-Succinylbenzoic acid (OSB) is an intermediate in the biosynthesis of shikimatederived anthraquinones. The cell free activation of o-succinylbenzoic acid in extracts of anthraquinone producing cells of Galium mollugo L. is demonstrated for the first time. This activation depends on the presence of ATP, coenzyme A and Mg²⁺. The o-succinylbenzoic acid coenzyme A ester was identified by converting it to 1,4-dihydroxy-2-naphthoic acid by a bacterial enzyme, viz. naphthoatesynthase. It is thus demonstrated that the o-succinylbenzoic acid coenzyme A ester derived from bacteria and from Galium mollugo cells are identical.     

Description of Geodermatophilus amargosae sp. nov., to Accommodate the Not Validly Named Geodermatophilus obscurus subsp. amargosae (Luedemann, 1968)

A novel, gram reaction positive aerobic actinobacterium, designated G12^T, not validly named as Geodermatophilus obscurus subsp. amargosae, was accessed in the DSMZ open collection as DSM 46136^T. The optimal growth was at 2,535 °C, at pH 6.0–12.0 and in the absence of NaCl, forming greenish-black-coloured colonies on GYM agar. Chemotaxonomic and molecular characteristics of the isolate matched those described for members of the genus Geodermatophilus. The DNA G+C content of the strain was 73.0 mol%. The peptidoglycan contained meso-diaminopimelic acid as diagnostic diamino acid. The main phospholipids were diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylinositol and a small amount of phosphatidylglycerol; MK-9(H₄) was the dominant menaquinone and galactose was detected as a diagnostic sugar. The major cellular fatty acid was branched-chain saturated acid iso-C_15:0. The 16S rRNA gene showed 94.2–99.5 % sequence identity with the members of the genus Geodermatophilus. Based on the chemotaxonomic results and 16S rRNA gene sequence analysis, strain G12^T is proposed to represent a novel species, Geodermatophilus amargosae. Type strain is G12^T [=G96] (=DSM 46136^T = CCUG 62971^T = MTCC 11559^T = ATCC 25081^T = JCM 3153^T = NBRC 13316^T = NRRL B-3578^T = KCTC 9360^T). The INSDC accession number is HF679056.     

Hybrid plants preserve unique genetic variation in the St Helena endemic trees <Emphasis Type="Italic">Commidendrum rotundifolium</Emphasis> DC Roxb. and <Emphasis Type="Italic">C. spurium</Emphasis> (G.Forst.) DC

The island of St Helena in the South Atlantic Ocean has a rich endemic flora, with 10 endemic genera and 45 recognised endemic species. However, populations of most endemic species have undergone dramatic reductions or extinction due to over-exploitation, habitat destruction and competition from invasive species. Consequently, endemic species are likely to have lost genetic variation, in some cases to extreme degrees. Here, the entire extant wild populations and all planted trees in seed orchards, of two critically endangered species in the endemic genus Commidendrum (Asteraceae), C. rotundifolium and C. spurium, were sampled to assess levels of genetic variation and inbreeding. Six new microsatellite loci were developed from next-generation sequence data, and a total of 190 samples were genotyped. Some seed orchard trees contained alleles from both wild C. rotundifolium and C. spurium indicating they could be hybrids and that some backcrossing may have occurred. Some of these trees were more similar to C. rotundifolium than C. spurium both genetically and morphologically. Importantly, allelic variation was detected in the putative hybrids that was not present in wild material. C. rotundifolium is represented by just two individuals one wild and one planted and C. spurium by seven, therefore the seed orchard trees comprise an important part of the total remaining genetic diversity in the genus Commidendrum.     

Biosynthesis of anthraquinones and related compounds in Galium mollugo cell suspension cultures

From Galium mollugo cell suspension cultures, 1,4-dihydroxy-3-prenyl-2-naphtholic acid methyl ester diglucoside was isolated along with anthraquinones and mollugin. Production of the diglucoside was much increased by administering 2-succinylbenzoate to the cultures. The incorporation of 2-succinylbenzoate into lucidin-3-primeveroside, mollugin and the diglucoside in the mode so far proposed for rubiaceous anthraquinones was verified by administration of ¹³C-labelled 2-succinylbenzoate to the cell cultures.     

Morphogenesis of the tail of bacteriophage lambda. III. Morphogenetic pathway.

Precursors of the tail of bacteriophage λ have been detected by measurements of in vitro complementation activities and serum blocking activity in sucrose gradients of lysates defective in tail genes.On the basis of these measurements, a pathway for the assembly of the λ tail is proposed:The morphogenesis of the λ tail starts from the tail fiber (product of gene J) located at the distal end of the tail, and proceeds to the proximal end. Gene J by itself produces a 15 S structure with serum blocking activity but without any detectable in vitro complementation activity, which may be the least advanced precursor of the λ tail or an abortive product. Functions of genes J, I, K, L are required for the formation of a 15 S precursor that has in vitro complementation activities with J⁻, I⁻, K⁻ and L⁻ lysates and serum blocking activity. If the products of genes G and H act on the latter 15 S precursor, a 25 S precursor is made, but this precursor seems either to be in equilibrium with the 15 S precursor or to degrade easily into the 15 S precursor. Gene M has a function of stabilizing the 25 S precursor. After the action of gene M product, the 25 S precursor is ready to serve as a nucleus on which the product of gene V (the major tail protein) assembles. However, gene U product is also necessary at this step for the correct assembly of the major tail protein on the 25 S precursor. Without gene U product the assembly of the major tail protein does not stop at the correct length and a polytail is formed instead of a morphologically normal tail. Finally, gene Z product acts on the morphologically normal tail and makes it a biologically active tail. Without the action of gene Z product, the defective tail binds to a head and forms a phage-like particle which is only very weakly infectious. (The position of gene T in the pathway is not determined, because no sus mutant is available in gene T.)Two abnormal, less efficient pathways are also present in vitro. (1) If gene U product acts on a polytail in an U⁻ lysate, the polytail finally binds to a head and forms a phage particle with an extra long tail which is infectious to a small extent. (2) The function of gene K seems to be bypassed to some extent: K⁻ lysates accumulate particles which sediment as fast as normal phage and which are complemented by other tail⁻ lysates.     

Bacillus daqingensis sp. nov., a halophilic,alkaliphilic bacterium isolated fromSaline-sodic soil in Daqing,China

An alkaliphilic, moderately halophilic, bacterium, designated strain X10-1^T, was isolated from saline-alkaline soil inDaqing, Heilongjiang Province, China. Strain X10-1^T was determined to be a Gram-positive aerobe with rod-shaped cells. The isolate was catalase-positive, oxidase-negative, non-motile, and capable of growth at salinities of 0–16% (w/v) NaCl (optimum, 3%). The pHrange for growth was 7.5–11.0 (optimum, pH 10.0). The genomic DNA G+C content was 47.7 mol%. Itsmajor isoprenoid quinone was MK-7 and its cellular fatty acid profile mainly consisted of anteiso-C_15:0, anteiso-C_17:0, iso-C_15:0, C_16:0, and iso-C_16:0. The peptidoglycan contained meso-diaminopimelic acid as the diagnostic diamino acid. The predominant polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, and phosphatidylglycerol. Phylogenetic analysis based on 16S rRNA gene sequences showed that X10-1^T is a member of the genus Bacillus, being most closely related to B. saliphilus DSM15402^T (97.8% similarity) and B. agaradhaerens DSM 8721^T (96.2%). DNA-DNA relatedness to the type strains of these species was less than 40%. On the basis of the phylogenetic, physiological, and biochemical data, strain X10-1^T represents a novel species of the genus Bacillus, for which the name Bacillus daqingensis sp. nov. is proposed. The type strain is X10-1^T (=NBRC 109404^T = CGMCC 1.12295^T).     

朱砂根愈伤组织培养及悬浮细胞系建立

以朱砂根(Ardisia crenata Sims.)无菌苗的茎段、叶片、胚轴和胚根为外植体进行愈伤组织诱导研究。结果表明:胚根在含有2,4-D的培养基中的诱导率最高,在添加5 mg L-1 AgNO3的MS+2,4-D 0.5 mg L-1+KT 0.01 mg L-1培养基中继代培养的增殖系数高达8倍以上。培养中获得了5种类型的愈伤组织(I-白色湿软状、Ⅱ-白色冰砂状、Ⅲ-淡黄色颗粒状、Ⅳ-黄绿色块状和V-绿色块状),其中Ⅱ和Ⅲ型愈伤组织可以成功建立悬浮细胞系,用M S+2,4-D 0.5 mg L-1+KT 0.01 mg L-1培养基进行固-液轮回培养,可以较好地保持悬浮细胞系。     

Communities of Berteroa incana in Europe and their geographical differentiation

Two geographical races have been established within the Berteroetum incanae in Europe. The Galium mollugo race of the Berteroetum incanae is characteristic of the western part of the distribution area of the association whereas the relevés from the eastern part of Europe are classified as the Acosta rhenana race of the Berteroetum incanae. Adventitious Berteroetum incanae from the Netherlands has been shown to be a separate subunit within the Galium mollugo race of the Berteroetum incanae.     

Glucuronyl glycine,a novel N-terminus in a glycoprotein

Treatment of cutinase, an extracellular glycoprotein produced by Fusarium solani f. pisi, with NaB³H₄ at pH 7.0 generated labeled enzyme. Acid hydrolysis showed that all of the label was in an acidic carbohydrate which was identified as gulonic acid. The N-terminal amino group of the enzyme is blocked; the precursor of gulonic acid has a free reducing group and it is attached via a linkage resistant to β-elimination. Furthermore, pronase digestion of NaB³H₄-treated cutinase gave rise to a ninhydrin negative compound which contained the bulk of the ³H and this compound was identified as N-gulonyl glycine. These results strongly suggest that the amino group of glycine, the N-terminal amino acid of this enzyme, is in amide linkage with glucuronic acid.     

松果梢斑螟对虫害诱导寄主防御的抑制作用

以松果梢斑螟（Dioryctria pryeri）-油松（Pinus tabuleaformis）（2年生球果和新梢）为研究对象,探讨梢斑螟幼虫对油松球果小卷蛾（Gravitarmata margarotana）先期虫害诱导寄主防御的抑制作用,以及虫害诱导的负防御机制。结果表明,双萜松脂酸作为油松球果和新梢的主要组成和诱导性防御物质,梢斑螟虫害后球果双萜松脂酸极显著增加,10 d后降低到正常水平;而新梢虫害后,松脂酸显著增加,后随新梢基础含量而增加,10 d后虫害新梢松脂酸显著高于球果。梢斑螟幼虫以小卷蛾虫害球果、健康球果和新梢等部位为食料,均为梢斑螟5龄幼虫下唇腺葡萄糖氧化酶（Glucose oxidase,GOX）活性最高,极显著高于4龄和3龄幼虫;且同一龄期,小卷蛾虫害球果中的梢斑螟幼虫GOX活性最高,显著高于新梢和健康球果中幼虫酶活性。研究发现,虫害后萜类防御物质随幼虫GOX活性升高呈下降趋势。梢斑螟幼虫RNA和P含量比较发现,取食小卷蛾虫害球果、健康球果和新梢3种食料,均为梢斑螟3龄幼虫最高,5龄幼虫最小,差异极显著;但同一龄期,3种食料发育的幼虫,其RNA和P含量间无显著差异。这些结果说明,小卷蛾幼虫的先期危害,诱导了寄主防御,但后来的梢斑螟幼虫通过下唇腺GOX抑制了寄主的诱导防御,使其生长率与健康球果和新梢中的幼虫基本一致。     

Inositol Metabolism in Plants. VI. Conversion of Myo-Inositol to Phytic Acid in Wolffiella floridana

When Wolffiella floridana, an aquatic angiosperm in the family, Lemnaceae, was grown in axenic culture under continuous light in E medium containing 1.0% sucrose and a micromolar amount of ¹⁴C-labeled myo-inositol (MI), MI was taken up by the growing plants and converted to phytic acid. After 13 weeks in labeled medium during which time there was a 1000-fold increase in fresh weight, 30% of the ¹⁴C was recovered in ethanol insoluble residue. Extraction of this residue with EDTA released 70% of the label into solution. Phytic acid, identified by paper electrophoresis, ion exchange chromatography, and hydrolysis with phytase, accounted for most of this radioactivity although some label was also found in pentaphosphate and lower phosphate esters of MI. Very little MI was converted to cell wall polysaccharides under the conditions used. Results of this study indicate that Wolffiella floridana is a convenient tissue for the study of phytic acid biosynthesis under laboratory conditions.

Lemna gibba G3, grown under short day conditions in medium of the same composition as that used for W. floridana, also formed labeled phytic acid as well as other labeled lower phosphate esters of MI.

     

Detoxification of Benzoxazolinone Allelochemicals from Wheat by Gaeumannomyces graminis var. tritici, G. graminis var. graminis, G. graminis var. avenae, and Fusarium culmorum

The ability of phytopathogenic fungi to overcome the chemical defense barriers of their host plants is of great importance for fungal pathogenicity. We studied the role of cyclic hydroxamic acids and their related benzoxazolinones in plant interactions with pathogenic fungi. We identified species-dependent differences in the abilities of Gaeumannomyces graminis var. tritici, Gaeumannomyces graminis var. graminis, Gaeumannomyces graminis var. avenae, and Fusarium culmorum to detoxify these allelochemicals of gramineous plants. The G. graminis var. graminis isolate degraded benzoxazolin-2(3H)-one (BOA) and 6-methoxy-benzoxazolin-2(3H)-one (MBOA) more efficiently than did G. graminis var. tritici and G. graminis var. avenae. F. culmorum degraded BOA but not MBOA. N-(2-Hydroxyphenyl)-malonamic acid and N-(2-hydroxy-4-methoxyphenyl)-malonamic acid were the primary G. graminis var. graminis and G. graminis var. tritici metabolites of BOA and MBOA, respectively, as well as of the related cyclic hydroxamic acids. 2-Amino-3H-phenoxazin-3-one was identified as an additional G. graminis var. tritici metabolite of BOA. No metabolite accumulation was detected for G. graminis var. avenae and F. culmorum by high-pressure liquid chromatography. The mycelial growth of the pathogenic fungi was inhibited more by BOA and MBOA than by their related fungal metabolites. The tolerance of Gaeumannomyces spp. for benzoxazolinone compounds is correlated with their detoxification ability. The ability of Gaeumannomyces isolates to cause root rot symptoms in wheat (cultivars Rektor and Astron) parallels their potential to degrade wheat allelochemicals to nontoxic compounds.     

Anti-obesity compounds in green leaves of Eucommia ulmoides

The anti-hypertensive effect of Eucommia leaves has been confirmed clinically,^{(a) and (b)} and the study of their anti-obesity properties has advanced.² However, the compounds involved in their anti-obesity effect have not been fully elucidated. In this Letter, we examined the anti-obesity effect of Eucommia green leaf extract (EGLE) divided into five fractions with high porous polystyrene gel and of the compounds isolated, geniposidic acid, asperuloside and chlorogenic acid, respectively. A metabolic syndrome-like clinical model in mice was generated by feeding a 40% high-fat diet to examine the anti-obesity effects of chronic administration of test substance. After 4 weeks, body weight, white adipose tissue weight, plasma triglyceride levels and total cholesterol levels in the model mice were significantly inhibited by the 30% MeOH fraction (containing much higher levels of asperuloside than the other fractions), and these effects were similar to those of EGLE. Chronic administration of isolated asperuloside in Eucommia leaves suppressed increases in model mouse body weight, white adipose tissue weight, plasma triglyceride levels and free fatty acids levels. These results suggest that asperuloside in Eucommia leaves has important anti-obesity effects.     

Gracilibacillus xinjiangensis sp. nov., a new member of the genus Gracilibacillus isolated from Xinjiang region, China

A Gram-positive, endospore-forming, rod-shaped bacterium, designated isolate J2^T was isolated from a soil sample from Xinjiang Uyghur Autonomous Region, China. The isolate was observed to grow at 16–46 °C and pH 6.5–8.0. Chemotaxonomic analysis showed menaquinone-7 (MK-7) to be the major isoprenoid quinone; diphosphatidylglycerol, phosphatidylglycerol, one aminophospholipid, two phosphoglycolipids and one glycolipid as the major cellular polar lipids; and anteiso-C_15:0, iso-C_15:0, anteiso-C_17:0 and C_16:0 as the major fatty acids. Comparative analyses of the 16S rRNA gene sequence showed that strain J2^T is most closely related to Gracilibacillus ureilyticus (with 98.8 % similarity), Gracilibacillus dipsosauri (97.2 %), Gracilibacillus quinghaiensis (97.1 %) and Gracilibacillus thailandensis (97.0 %). The DNA–DNA reassociation values between strain J2^T and G. ureilyticus MF38^T, G. dipsosauri DD1^T, G. quinghaiensis YIM-C229^T and G. thailandensis TP2-8^T were 29.8 ± 3.7, 23.0 ± 3.5, 15.8 ± 4.9 and 15.9 ± 5.0 %, respectively. The genomic DNA G+C content of strain J2^T was determined to be 36.5 mol%. Based on these data, strain J2^T is considered as a novel species of the genus Gracilibacillus, for which the name Gracilibacillus xinjiangensis sp. nov. is proposed. The type species is J2^T (= CGMCC 1.12449^T = JCM 18859^T).     

Fatty acids in the genus Bacillus. II. Similarity in the fatty acid compositions of Bacillus thuringiensis, Bacillus anthracis, and Bacillus cereus

The nature and relative abundance of fatty acids produced by two strains each of Bacillus thuringiensis and of B. anthracis were studied by gas-liquid chromatography on a 12,000 theoretical plate polyester column capable of partially resolving iso- and anteiso-fatty acids with the same number of carbon atoms. Unsaturated fatty acids as the bromo derivatives were separated from the saturated acids and resolved in a short SE-30 column by use of programmed-temperature gas chromatography. All four strains produced 16 major fatty acids: 9 branched (i-C₁₂, i-C₁₃, i-C₁₄, i-C₁₅, i-C₁₆, i-C₁₇, a-C₁₃, a-C₁₅, and a-C₁₇), 3 normal (n-C₁₄, n-C₁₅, and n-C₁₆), and 4 monounsaturated (i-C₁₆¹⁼, i-C₁₇¹⁼, a-C₁₇¹⁼, and n-C₁₆¹⁼), in addition to some minor fatty acids. In all cases, 12 branched acids, including saturated and monounsaturated, made up over 70% of the total fatty acids, and iso-C₁₅ acid was most abundant. These fatty acid distribution patterns were very similar to those of B. cereus and B. cereus var. mycoides. There were, however, minor but clear differences between the fatty acid distribution patterns of B. thuringiensis and B. anthracis. B. thuringiensis, like B. cereus, produced higher proportions of i-C₁₃, a-C₁₃, and i-C₁₄ fatty acids than did B. anthracis. This difference between these two species could be useful as a supplemental criterion in their differentiation. Indications are that the enzyme systems for monounsaturated fatty acid synthesis in B. thuringiensis and B. anthracis prefer normal fatty acids as substrates rather than branched-chain fatty acids.     

Order of enzymic incorporation of O-methyl groups into the O-methyl-d-glucose-containing polysaccharide of Mycobacterium smegmatis. A tritium-labelling study

The order of enzymic incorporation of O-methyl groups into the O-methyl-d-glucose-containing polysaccharide (MGP) of Mycobacterium smegmatis, 3MG(J)→G(I)→G(H)→G(G)→6MG(F)→(GMG)₉(E)→[G(L)→G(D)]→G(C)→[G(K)→G(B)]→G(A)→Ga, where G is d-glucose, 3MG is 3-O-methyl-d-glucose, 6MG is 6-O-methyl-d-glucose, and Ga is d-glyceric acid, was studied by incubating cultures of M. smegmatis with l-[³H-Me]methionine for various times. MGP was then extracted from the cells, and relative radioactivities of residues D, (E + F)_average and J, or of D, E_average, F, and J, were determined. Tritium-labelling of these residues increased in the reducing-to-nonreducing residue direction, the steepness of the gradient becoming more shallow with increasing incubation time. The results are consistent with a biosynthetic mechanism that involves sequential addition of O-methyl groups to residues of the pre-formed d-glucan, in the reducing-to-non-reducing residue direction.     

Description of five novel thermophilic species of the genus Thermus: Thermus hydrothermalis sp. nov., Thermus neutrinimicus sp. nov., Thermus thalpophilus sp. nov., Thermus albus sp. nov., and Thermus altitudinis sp. nov., isolated from hot spring sediments

Biological denitrification is a significant process in nitrogen biogeochemical cycle of terrestrial geothermal environments, and Thermus species have been shown to be crucial heterotrophic denitrifier in hydrothermal system. Five Gram-stain negative, aerobic and rod-shaped thermophilic bacterial strains were isolated from hot spring sediments in Tibet, China. Phylogenetic analysis based on 16S rRNA gene and whole genome sequences indicated that these isolates should be assigned to the genus Thermus and were most closely related to Thermus caldifontis YIM 73026^T, and Thermus brockianus YS38^T. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between the five strains and the type strains of the genus Thermus were lower than the threshold values (95% and 70%, respectively) recommended for bacterial species, which clearly distinguished the five isolates from other species of the genus Thermus and indicated that they represent independent species. Colonies are circular, convex, non-transparent. Cell growth occurred at 37–80 °C (optimum, 60–65 °C), pH 6.0–8.0 (optimum, pH 7.0) and with 0–2.0% (w/v) NaCl (optimum, 0–0.5%). Denitrification genes (narG, nirK, nirS, and norB genes) detected in their genomes indicated their potential function in nitrogen metabolism. The obtained results combined with those of morphological, physiological, and chemotaxonomic characteristics, including the menaquinones, polar lipids, and cellular fatty acids showed that the isolates are proposed as representing five novel species of the genus Thermus, which are proposed as Thermus hydrothermalis sp. nov. SYSU G00291^T, Thermus neutrinimicus sp. nov. SYSU G00388^T, Thermus thalpophilus sp. nov. SYSU G00506^T, Thermus albus sp. nov. SYSU G00608^T, Thermus altitudinis sp. nov. SYSU G00630^T.