Biogeography and priority areas for the conservation of bats in the Brazilian Cerrado

In this study, we describe the distribution pattern of bat species and select priority areas for the conservation of the Cerrado based on a systematic planning approach. We estimated species richness and calculated the total beta diversity based on Sørensen’s dissimilarity index (βsor). We estimated the species turnover using Simpson’s dissimilarity index (βsim). We then evaluated the nesting (βsne) by the difference between the dissimilarity indices (βsor and βsim). Based on this analysis, we identified the priority areas for the conservation of bats in the Cerrado based on the zonation approach. We found that the species richness and beta diversity of bats in the Cerrado are concentrated primarily in the central and northern portions of the biome. We also discovered that the conservation units of the Cerrado are ineffective for the protection of species with a restricted distribution (≤ 150 grid cells), such as Vampyrum spectrum, for which we propose the creation of new conservation units that better cover the diversity patterns observed in the present study. By conserving this diversity, we will also be protecting local habitats, which will in turn enable the survival of a wide range of species, and provide the ecosystems with the capacity to respond adequately to future changes in the environment.     

Are all Mexican odonate species documented? An assessment of species richness

With the aim of protecting Mexican diversity, one current governmental task is to complete national biological inventories. In the case of odonate insects, several researchers have hypothesized that species richness is complete (205 dragonflies and 151 damselflies), but there has not been any formal exercise to test this. Thus, we have investigated whether odonate species richness (for Mexican endemics, dragonflies (suborder Anisoptera), damselflies (suborder Zygoptera) and total species) is complete using sample-based and coverage-based rarefaction curves. Along with this, we also showed how good distribution data are in the country. The rarefaction curves have indicated 100% completeness for all groups suggesting that the inventory is complete. However, species' distribution data is highly patchy regarding areas either well (e.g. central Mexico) or badly (e.g. coast of Guerrero and Oaxaca) collected. We encourage researchers to continue odonate sampling in order to support at least three conservation actions: (i) conservation assessment of endangered species; (ii) knowledge of range shifts given rising global temperatures; and (iii) increase public interest and awareness in protected, touristic areas.     

Stochastic losses of fire‐dependent endemic herbs revealed by a 65‐year chronosequence of dispersal‐limited woody plant encroachment

The factors responsible for maintaining diverse groundcover plant communities of high conservation value in frequently burned wet pine savannas are poorly understood. While most management involves manipulating extrinsic factors important in maintaining species diversity (e.g., fire regimes), most ecological theory (e.g., niche theory and neutral theory) examines how traits exhibited by the species promote species coexistence. Furthermore, although many ecologists focus on processes that maintain local species diversity, conservation biologists have argued that other indices (e.g., phylogenetic diversity) are better for evaluating assemblages in terms of their conservation value. I used a null model that employed beta‐diversity calculations based on Raup–Crick distances to test for deterministic herbaceous species losses associated with a 65‐year chronosequence of woody species encroachment within each of three localities. I quantified conservation value of assemblages by measuring taxonomic distinctness, endemism, and floristic quality of plots with and without woody encroachment. Reductions in herb species richness per plot attributable to woody encroachment were largely stochastic, as indicated by a lack of change in the mean or variance in beta‐diversity caused by woody encroachment in the savannas studied here. Taxonomic distinctness, endemism, and floristic quality (when summed across all species) were all greater in areas that had not experienced woody encroachment. However, when corrected for local species richness, only average endemism and floristic quality of assemblages inclusive of herbs and woody plants were greater in areas that had not experienced woody encroachment, due to the more restricted ranges and habitat requirements of herbs. Results suggest that frequent fires maintain diverse assemblages of fire‐dependent herb species endemic to the region. The stochastic loss of plant species, irrespective of their taxonomic distinctness, to woody encroachment suggests that the relevance of niche partitioning or phylogenetic diversity to the management of biodiversity in wet pine savannas is minimal.     

Distorted perception of the spatial distribution of plant diversity through uneven collecting efforts: the example of Asteraceae in Australia

Aim Our aims were (1) to compare observed, estimated and predicted patterns of species richness using the Australian native Asteraceae as an example, (2) to identify candidates for hotspots of diversity for the study group, and (3) to examine the distortion of our perception of the spatial distribution of species richness through uneven or misdirected sampling efforts. Location Australia. Methods Based on data from Australia’s Virtual Herbarium, we calculated and visualized observed species richness, the Chao1 estimate of richness, the C index of collecting completeness, and an estimate of richness derived from environmental niche modelling for grid cells at a resolution of 1°. The 20 cells with the highest diversity values were used to define hotspots of diversity. Results Uneven collecting activity results in misleading diversity patterns for the family Asteraceae. While observed species richness is much higher in central Australia than in other parts of the arid interior, this is an artefact resulting from the area being a hotspot of collecting activity. The mountain ranges of south‐eastern Australia and Tasmania are candidates for unbiased hotspots of species richness. Main conclusions Vast areas of the Australian interior are insufficiently sampled on a local scale, although most of them can be expected to be relatively species poor. Some areas in the south‐east and south‐west of the continent remain undersampled relative to their high species richness. Observed species numbers, estimators and environmental niche‐modelling all have their unique advantages and disadvantages for the inference of patterns of diversity.     

Vulnerability of dynamic genetic conservation units of forest trees in Europe to climate change

A transnational network of genetic conservation units for forest trees was recently documented in Europe aiming at the conservation of evolutionary processes and the adaptive potential of natural or man‐made tree populations. In this study, we quantified the vulnerability of individual conservation units and the whole network to climate change using climate favourability models and the estimated velocity of climate change. Compared to the overall climate niche of the analysed target species populations at the warm and dry end of the species niche are underrepresented in the network. However, by 2100, target species in 33–65 % of conservation units, mostly located in southern Europe, will be at the limit or outside the species' current climatic niche as demonstrated by favourabilities below required model sensitivities of 95%. The highest average decrease in favourabilities throughout the network can be expected for coniferous trees although they are mainly occurring within units in mountainous landscapes for which we estimated lower velocities of change. Generally, the species‐specific estimates of favourabilities showed only low correlations to the velocity of climate change in individual units, indicating that both vulnerability measures should be considered for climate risk analysis. The variation in favourabilities among target species within the same conservation units is expected to increase with climate change and will likely require a prioritization among co‐occurring species. The present results suggest that there is a strong need to intensify monitoring efforts and to develop additional conservation measures for populations in the most vulnerable units. Also, our results call for continued transnational actions for genetic conservation of European forest trees, including the establishment of dynamic conservation populations outside the current species distribution ranges within European assisted migration schemes.     

Niche width impacts vertebrate diversification

Aim The size of the climatic niche of a species is a major factor determining its distribution and evolution. In particular, it has been proposed that niche width should be associated with the rate of species diversification. Here, we test whether species niche width affects the speciation and extinction rates of three main clades of vertebrates: amphibians, mammals and birds. Location Global. Methods We obtained the time‐calibrated phylogenies, IUCN conservation status, species distribution maps and climatic data for 2340 species of amphibians, 4563 species of mammals and 9823 species of birds. We computed the niche width for each species as the mean annual temperature across the species range. We estimated speciation, extinction and transition rates associated with lineages with either narrow (specialist) or wide (generalist) niches using phylogeny‐based birth–death models. We also tested if current conservation status was correlated with the niche width of species. Results We found higher net diversification rates in specialist species than in generalist species. This result was explained by both higher speciation rates (for the three taxonomic groups) and lower extinction rates (for mammals and birds only) in specialist than in generalist species. In contrast, current specialist species tended to be more threatened than generalist species. Main conclusions Our diversification analysis shows that the width of the climatic niche is strongly associated with diversification rates and may thus be a crucial factor for understanding the emergence of diversity patterns in vertebrates. The striking difference between our diversification results and current conservation status suggests that the current extinction process may be different from extinction rates estimated from the whole history of the group.     

The projected effects of climatic and vegetation changes on the distribution and diversity of Southeast Asian bats

Southeast‐Asia (SEA) constitutes a global biodiversity hotspot, but is exposed to extensive deforestation and faces numerous threats to its biodiversity. Climate change represents a major challenge to the survival and viability of species, and the potential consequences must be assessed to allow for mitigation. We project the effects of several climate change scenarios on bat diversity, and predict changes in range size for 171 bat species throughout SEA. We predict decreases in species richness in all areas with high species richness (>80 species) at 2050–2080, using bioclimatic IPCC scenarios A2 (a severe scenario, continuously increasing human population size, regional changes in economic growth) and B1 (the ‘greenest’ scenario, global population peaking mid‐century). We also predicted changes in species richness in scenarios that project vegetation changes in addition to climate change up to 2050. At 2050 and 2080, A2 and B1 scenarios incorporating changes in climatic factors predicted that 3–9% species would lose all currently suitable niche space. When considering total extents of species distribution in SEA (including possible range expansions), 2–6% of species may have no suitable niche space in 2050–2080. When potential vegetation and climate changes were combined only 1% of species showed no changes in their predicted ranges by 2050. Although some species are projected to expand ranges, this may be ecologically impossible due to potential barriers to dispersal, especially for species with poor dispersal ability. Only 1–13% of species showed no projected reductions in their current range under bioclimatic scenarios. An effective way to facilitate range shift for dispersal‐limited species is to improve landscape connectivity. If current trends in environmental change continue and species cannot expand their ranges into new areas, then the majority of bat species in SEA may show decreases in range size and increased extinction risk within the next century.     

Species richness and complementarity of beetle faunas in a mediterranean-type biodiversity hotspot

Regions of mediterranean-type climate represent most extra-tropical biodiversity hotspots, being both highly diverse and highly endangered. Though renowned for their plant richness, these regions’ insects constitute the bulk of their alpha diversities. Data on insect distribution and rarity are generally lacking for such regions, and are often considered unattainable. Intensive field inventories combined with statistical extrapolation methods can provide a sufficient understanding of alpha, beta, and gamma diversity components for application to conservation planning. These are essential to assessing the adequacy of a regional reserve network for the conservation of insect diversity. Here the beetle faunas of three protected areas spanning three major ecoregions in the California Floristic Province were inventoried and analyzed for species richness, complementarity, and uniqueness. These surveys produced collectively nearly 1,200 species from all three sites, estimated to be about 80% of their total faunas. Diversity was highly partitioned among sites, no one site containing more than 60% of the species. Dissimilarity was moderate to high for all comparisons, and all sites contained >40% unique species. Comparison of these results with those based on species of co-occurring plants reveal incongruent species richness but congruent similarities among sites. These results provide quantitative support to the perception that mediterranean insect faunas show high spatial variability. Along with online specimen level data on distribution, rarity, and seasonality, these results will help speed the incorporation of insect data into serious conservation planning.     

Environmental drivers of ant species richness and composition across the Argentine Pampas grassland

Understanding the underlying mechanisms causing diversity patterns is a fundamental objective in ecology and science‐based conservation biology. Energy and environmental‐heterogeneity hypotheses have been suggested to explain spatial changes in ant diversity. However, the relative roles of each one in determining alpha and beta diversity patterns remain elusive. We investigated the main factors driving spatial changes in ant (Hymenoptera, Formicidae) species richness and composition (including turnover and nestedness components) along a 500 km longitudinal gradient in the Pampean region of Argentina. Ants were sampled using pitfall traps in 12 sample sites during the summer. We performed a model selection approach to analyse responses of ant richness and composition dissimilarity to environmental factors. Then, we computed a dissimilarity partitioning of the contributions of spatial turnover and nestedness to total composition dissimilarity. Temporal habitat heterogeneity and temperature were the primary factors explaining spatial patterns of epigean ant species richness across the Pampas. The distance decay in species composition similarity was best accounted by temperature dissimilarity, and turnover had the greatest contribution to the observed beta diversity pattern. Our findings suggest that both energy and environmental‐heterogeneity‐related variables are key factors shaping richness patterns of ants and niche‐based processes instead of neutral processes appear to be regulating species composition of ant assemblages. The major contribution of turnover to the beta diversity pattern indicated that lands for potential reconversion to grassland should represent the complete environmental gradient of the Pampean region, instead of prioritizing a single site with high species richness.     

Prioritizing global marine mammal habitats using density maps in place of range maps

Despite lessons from terrestrial systems, conservation efforts in marine systems continue to focus on identifying priority sites for protection based on high species richness inferred from range maps. Range maps oversimplify spatial variability in animal distributions by assuming uniform distribution within range and de facto giving equal weight to critical and marginal habitats. We used Marxan ver. 2.43 to compare species richness‐based systematic reserve network solutions using information about marine mammal range and relative abundance. At a global scale, reserve network solutions were strongly sensitive to model inputs and assumptions. Solutions based on different input data overlapped by a third at most, with agreement as low as 10% in some cases. At a regional scale, species richness was inversely related to density, such that species richness hotspots excluded highest‐density areas for all species. Based on these findings, we caution that species‐richness estimates derived from range maps and used as input in conservation planning exercises may inadvertently lead to protection of largely marginal habitat.     

Geographical patterns in the beta diversity of China's woody plants: the influence of space,environment and range size

Beta diversity (i.e. species turnover rate across space) is fundamental for understanding mechanisms controlling large‐scale species richness patterns. However, the influences on beta diversity are still a matter of debate. In particular, the relative role of environmental and spatial processes (e.g. environmental niche versus dispersal limitation of species) remains elusive, and the influence of species range size has been poorly tested. Here, using distribution maps of 11 405 woody species in China (ca 9.6 × 10⁶ km²), we investigated 1) the geographical and directional patterns of beta diversity for all woody species and species with different range sizes, and 2) compared the effects of environmental and spatial processes on these patterns. Beta diversity was calculated as the decay of similarity in species composition with increasing distance. Variables representing environmental energy, water availability, climatic seasonality, habitat heterogeneity and human activities were used to evaluate the effects of environmental processes, while spatial distance was used to assess the influence of spatial processes. The results indicated significant directional patterns of beta diversity: the similarity decay along the latitudinal gradient was 1.6–2.3 times faster than that along the longitudinal gradient. Beta diversity also increased with the decrease of species range size. As compared with spatial processes, environmental processes had stronger effects on longitudinal beta diversity and on the beta diversity of widely‐ranged species. This was opposite to the larger influence of spatial processes on latitudinal beta diversity and the beta diversity of narrowly‐ranged species. These results suggest that the distributions of narrowly‐ranged woody species in China may have not reached equilibrium with their environmental niches due to dispersal limitation induced by China's topography and/or their low dispersal ability. The projected rapid climatic changes will likely endanger such species. Species dispersal processes should be taken into account in future conservation strategies in China.     

Distribution Patterns and Conservation Perspectives of the Endemic Flora of Peloponnese (Greece)

An inventory of the endemic vascular plants of the Peloponnese (395 species and subspecies) has been created based on literature, herbarium and field data. Endemics?? distribution patterns, altitudinal distribution and habitat specificity were investigated. A rarity score for each endemic has been calculated based on its population size, geographic range and habitat specificity. The main mountainous areas of the Peloponnese are largely congruent to the hotspots of endemism. Altitudinal range and niche breadth of the endemics were positively correlated to their range size. The elevational gradient of the endemic species richness showed a hump-shaped pattern, in contrast to the monotonically decreasing pattern of total species richness. Endemic species were found to support boundary theory, while total species richness distribution followed the Rapoport??s elevational rule. The elevational distribution of the average rarity score and the average weighted threat of the endemics resulted in low values for mid-elevation intervals and increased values for low and high altitude areas, indicating that conservation efforts should focus on the two extremes of the elevational gradient. Area prioritization methods were applied using a rarity/complementarity based algorithm with two species weighting schemes. Their results were largely congruent confirming the significance of the main mountainous areas for the conservation of the endemics. Spatial overlap among selected grid cells using the rarity/complementarity analysis and Natura 2000 network was found to be low. Our results revealed the conservation importance of at least one new area located on Kythera Island.     

The effectiveness of aquatic plants as surrogates for wider biodiversity in standing fresh waters

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Diversity and community composition of butterflies and odonates in an ENSO-induced fire affected habitat mosaic: a case study from East Kalimantan, Indonesia

Little is known about the diversity of tropical animal communities in recently fire‐affected environments. Here we assessed species richness, evenness, and community similarity of butterflies and odonates in landscapes located in unburned isolates and burned areas in a habitat mosaic that was severely affected by the 1997/98 ENSO (El Niño Southern Oscillation) event in east Kalimantan, Indonesian Borneo. In addition related community similarity to variation in geographic distance between sampling sites and the habitat/vegetation structure Species richness and evenness differed significantly among landscapes but there was no congruence between both taxa. The species richness of butterflies was, for example, highest in sites located in a very large unburned isolate whereas odonate species richness was highest in sites located in a small unburned isolate and once‐burned forest. We also found substantial variation in the habitat/vegetation structure among landscapes but this was mainly due to variation between unburned and burned landscapes and variation among burned landscapes. Both distance and environment (habitat/vegetation) contributed substantially to explaining variation in the community similarity (beta diversity) of both taxa. The contribution of the environment was, however, mainly due to variation between unburned and burned landscapes, which contained very different assemblages of both taxa. Sites located in the burned forest contained assemblages that were intermediate between assemblages from sites in unburned forest and sites from a highly degraded slash‐and‐burn area indicating that the burned forest was probably recolonised by species from these disparate environments. We, furthermore, note that in contrast to species richness (alpha diversity) the patterns of community similarity (beta diversity) were highly congruent between both taxa. These results indicate that community‐wide multivariate measures of beta diversity are more consistent among taxa and more reliable indicators of disturbance, such as ENSO‐induced burning, than univariate measures.     

Environmental marginality and geographic range limits: a case study with Arabidopsis lyrata ssp. lyrata

Understanding the factors that govern the distribution of species is a central goal of evolutionary ecology. It is commonly assumed that geographic range limits reflect ecological niche limits and that species experience increasingly marginal conditions towards the edge of their ranges. Using spatial data and ecological niche models we tested these hypotheses in Arabidopsis lyrata. Specifically, we asked whether range limits coincide with predicted niche limits in this system and whether the suitability of sites declines towards the edge of the species’ range in North America. We further explored patterns of environmental change towards the edge of the range and asked whether genome‐wide patterns of genetic diversity decline with increasing peripherality and environmental marginality. Our results suggest that latitudinal range limits coincide with niche limits. Populations experienced increasingly marginal environments towards these limits – though patterns of environmental change were more complex than most theoretical models for range limits assume. Genomic diversity declined towards the edge of the species’ range and with increasing distance from the estimated centre of the species’ niche in environmental space, but not with the suitability of sites based on niche model predictions. Thus while latitudinal range limits in this system are broadly associated with niche limits, the link between environmental conditions and genetic diversity (and thus the adaptive potential of populations) is less clear.     

Species richness, species range size and ecological specialisation among African primates: geographical patterns and conservation implications

The geographical distribution of species richness and species range size of African anthropoid primates (catarrhines) is investigated and related to patterns of habitat and dietary niche breadth. Catarrhine species richness is concentrated in the equatorial regions of central and west Africa; areas that are also characterised by low average species range sizes and increased ecological specificity. Species richness declines with increasing latitude north and south of the equator, while average species range size, habitat and dietary breadth increase. Relationships between species richness, species range size and niche breadth remain once latitudinal and longitudinal effects have been removed. Among areas of lowest species richness, however, there is increased variation in terms of average species range size and niche breadth, and two trends are identified. While most such areas are occupied by a few wide-ranging generalists, others are occupied by range-restricted specialist species. That conservation efforts increasingly focus on regions of high species richness may be appropriate if these regions are also characterised by species that are more restricted in both their range size and their ecological versatility, although special consideration may be required for some areas of low species richness.     

The distribution of amphibian species richness in protected areas of Chiapas,Mexico

Due to the current environmental crisis, many animal species face extinction problems. Amphibian populations have been affected by this crisis. Our goal is to study amphibian species diversity in Chiapas, which has 7.6% of the endemic amphibians in Mexico and 53 protected areas. Only 58% of the protected areas have management plans or information on their resident amphibians. We aim to determine the extent of protection provided by the network of natural areas for the conservation of amphibian species in the state and to discuss the effectiveness of this protection. Therefore, we compiled a georeferenced database of 112 amphibian species in Chiapas to create each distribution model. In addition, we carried out representativeness, beta diversity, and species richness analyses. As a result, we obtained a high degree of representativeness for the records and species distribution models. However, we found a decrease in the richness of amphibians involving 20% of total species, 13% of endemics, 18% threatened according to NOM-059, and 31% threatened according to IUCN between 1800 and 2020 and 1980–2020. We also identified two biodiversity hotspots in the Sierra Madre de Chiapas and the Northern Highlands physiographic regions. Finally, based on potential distributions, we found more endemic and threatened species outside protected natural areas than inside them. Our results give a broader picture of how amphibian richness is distributed in Chiapas. This information can help to prioritize conservation efforts toward those areas rich in threatened or endemic species, such as the Northern Mountains Hotspot we identified in northern Chiapas.     

Hierarchical partitioning of ant diversity: implications for conservation of biogeographical diversity in arid and semi‐arid areas

Aim The scale of observation is important in detecting the spatial variation of biological assemblages, which should be taken into consideration for an appropriate plan of biogeographical conservation. We investigated whether (1) World Wildlife Fund’s ecoregion units are the appropriate scale for conserving ant diversity in Iran, (2) each ecoregion represents a distinct ant community composition and (3) patterns of diversity partitioning differ among four ecoregions. Location Iran, a sampling transect along four arid and semi‐arid ecoregions. Methods We applied hierarchical partitioning to data collected from a nested sampling design including four hierarchical levels: ‘local’, ‘landscape’, ‘ecoregional’ and ‘whole‐region’. Observed alpha and beta diversity components were compared with values of null distributions. Hierarchical cluster analysis was applied to evaluate similarity of ant species composition among ecoregions. Results Partitioning of whole‐region species richness showed that 85% of the species richness was generated by beta diversity among ecoregions and landscapes. The highest value of diversity was generated by beta diversity among ecoregions. Unlike whole‐region partitioning, separate partitioning within each ecoregion revealed that beta component among localities contributed to species richness of each ecoregion. Ecoregions showed different patterns of diversity partitioning. The alpha component contributed largely to the total diversity of two ecoregions, but for two other ecoregions, beta component contributed more than alpha component. Cluster analysis identified four discrete ant species compositions; however, it split landscapes of one ecoregion into two distinct groups. Main conclusions Whole‐region diversity partitioning indicates that ecoregions represent the appropriate scale for conserving ant diversity and that each ecoregion has a distinct ant fauna. However, different conservation strategies should be considered for different ecoregions owing to the differing scales of variation within them. Boundaries of ecoregions remain a subject for further studies. The influence of climate change on ecoregional boundaries should be considered and should be predicted with respect to future conservation maps.     

Are different facets of plant diversity well protected against climate and land cover changes? A test study in the French Alps

Climate and land cover changes are important drivers of the plant species distributions and diversity patterns in mountainous regions. Although the need for a multifaceted view of diversity based on taxonomic, functional and phylogenetic dimensions is now commonly recognized, there are no complete risk assessments concerning their expected changes. In this paper, we used a range of species distribution models in an ensemble‐forecasting framework together with regional climate and land cover projections by 2080 to analyze the potential threat for more than 2500 plant species at high resolution (2.5 × 2.5 km) in the French Alps. We also decomposed taxonomic, functional and phylogenetic diversity facets into α and β components and analyzed their expected changes by 2080. Overall, plant species threats from climate and land cover changes in the French Alps were expected to vary depending on the species' preferred altitudinal vegetation zone, rarity, and conservation status. Indeed, rare species and species of conservation concern were the ones projected to experience less severe change, and also the ones being the most efficiently preserved by the current network of protected areas. Conversely, the three facets of plant diversity were also projected to experience drastic spatial re‐shuffling by 2080. In general, the mean α‐diversity of the three facets was projected to increase to the detriment of regional β‐diversity, although the latter was projected to remain high at the montane‐alpine transition zones. Our results show that, due to a high‐altitude distribution, the current protection network is efficient for rare species, and species predicted to migrate upward. Although our modeling framework may not capture all possible mechanisms of species range shifts, our work illustrates that a comprehensive risk assessment on an entire floristic region combined with functional and phylogenetic information can help delimitate future scenarios of biodiversity and better design its protection.     

How dung beetles respond to a human‐modified variegated landscape in Mexican cloud forest: a study of biodiversity integrating ecological and biogeographical perspectives

Aim To analyse how the dung beetles (Scarabaeinae) respond to a modified, variegated landscape, taking into account the biogeographical peculiarities of the Mexican Transition Zone. Location This study covers cloud forest (CF) of the Sierra Norte de Puebla mountain range and part of the Sierra Madre Oriental mountain range (Mexico). Methods We applied proportional sampling based on the landscape variegation model with Scarabaeinae as the indicator group, and using two approaches: structural units (vegetation type) and spatial units (windows). We used two measures – richness and Shannon diversity – and applied multiplicative diversity partitioning to obtain independent alpha and beta diversities for the landscape, windows and vegetation types. We grouped species by biogeographical distribution pattern for the biogeographical analysis and by whether they were originally from CF. Results The transformation of CF into secondary forest, pastures and other types of vegetation increases the Scarabaeinae diversity of the landscape, in vegetation types and windows. This increase is the result of species arriving from the tropical lowlands. However, the original dung beetle community of the CF dominates at different scales in the number of species, abundance and biomass. With increasing habitat modification, beta diversity increases in the windows, and species with the Tropical Palaeoamerican distribution pattern increase in abundance in vegetation types and windows. Main conclusions The variegated character of the landscape explains well the distribution and diversity of this dung beetle community. The peculiar characteristics of the Mexican Transition Zone have an effect owing to the overlap of fauna with different biogeographical origins. The conversion of fragmented landscapes to variegated landscapes could be a conservation goal in human‐modified mountain landscapes. Sampling proportional to the area of different types of vegetation and the use of windows offer an alternative experimental design in variegated landscapes.