PNAS:细胞周期中嘌呤合成新机制

<正>近日,来自美国的科学家在著名国际期刊PNAS发表一项最新研究成果,他们发现purinosome的组装与去组装过程随细胞周期变化并且与细胞周期过程中嘌呤的生物合成过程有关,并且在不同细胞模型中purinosome可能出现在细胞周期的不同阶段。研究人员指出,嘌呤从头合成途径需要6个酶的作用,催化磷酸核糖焦磷酸生成5`-磷酸肌苷。在嘌呤缺失的情况下,这些酶能够形成一个多酶复合物,称为purinosome。之前研究已经发现purinosome对哺乳动物癌细胞具有重要作用。在这项研究中,研究人员应用延时荧光显微镜在两     

肌苷合成关键酶活性与肌苷积累之间的关系

测定比较了高产肌苷菌、低产肌苷菌和野生菌肌苷合成途径中PRPP转酰胺酶、sAMP合成酶、IMP脱氢酶和5′核苷酸酶的比活以及活细胞的肌苷水解能力,进一步阐明了菌株产苷性能与肌苷合成途径关键酶活力间的密切关系。根据高产肌苷菌的酶学特性,确定了高产肌苷菌进一步基因工程改造的方向。研究表明酶学研究对有目的、有方向地进行高产菌株的选育工作具有重要意义。     

产嘌呤核苷的枯草杆菌prsA基因在大肠杆菌中的表达

为了克隆产嘌呤核苷的枯草杆菌prsA基因。用PCR扩增的方法,从产肌苷的枯草杆菌Bacillus subtilis JSIM-1019中克隆出一个长1kb长的DNA片段,经功能检测,证明正向插入片段与大肠杆菌的磷酸核糖焦磷酸营养缺陷特性（PREP-）能够营养互补。含有该重组质粒的PRPP缺陷大肠杆菌JSIM—DH-27在基本培养基上的能够生长。     

3,5,2',4'-四羟基查尔酮对小鼠尿酸及尿酸合成相关酶基因的影响

用氧嗪酸钾诱导高尿酸血症动物模型,对化合物3,5,2',4'-四羟基查尔酮(P40)的降尿酸作用及尿酸合成相关酶基因进行研究。用磷钨酸法测定小鼠血清尿酸水平,用RT-PCR测定脑组织中次黄嘌呤鸟嘌呤磷酸核糖转移酶(HGPRT)、肝脏中的磷酸核糖焦磷酸合成酶(PRPS)和磷酸核糖焦磷酸酰胺转移酶(PRPPAT)mRNA的表达水平。结果表明:灌胃给予高尿酸血症小鼠P40 2、4、8 mg/kg和阳性对照药别嘌醇1 mg/kg,共给药5次,每天2次,均显著降低血清尿酸水平(P0.05,0.01),具有显著的降尿酸作用;但对HGPRT、PRPS、PRPPAT的mRNA表达水平无明显影响。     

柠檬酸钠对枯草杆菌生长代谢及肌苷积累的影响

研究柠檬酸钠对枯草杆菌生长代谢及产苷的影响 ,在基础料中添加浓度为 0 2g L的柠檬酸钠 ,肌苷产量提高 18% ,肌苷对葡萄糖得率增加 38%。通过分析糖代谢途径中关键酶的酶活 ,结果表明添加柠檬酸钠改变了一些关键酶的活力 ,可降低糖酵解途径中 6_磷酸果糖激酶和丙酮酸激酶的活力 ,从而减弱了糖酵解途径的通量。     

枯草芽孢杆菌嘌呤合成途径的修饰对腺苷积累的影响

【目的】研究嘌呤操纵子中purF、purM、purN、purH和purD基因的共同过表达对枯草芽孢杆菌发酵生产腺苷的影响。【方法】利用温敏质粒pKS1,以单交换的形式增加了purF基因在基因组上的拷贝数,同时将强启动子P43插入嘌呤操纵子中,使嘌呤合成途径中purF基因及其下游purM、purN、purH和purD基因的表达水平得到加强,通过实时定量PCR(Realtime Quantitative PCR,RT-qPCR)测定相关基因(purF、purM、purN、purH和purD)的转录水平;通过酶活性检测分析关键酶基因扩增对PRPP转酰胺酶活性的影响;通过发酵实验考察出发菌株与工程菌株的生长、耗糖和腺苷积累情况。【结果】实时定量PCR结果表明,purF、purM、purN、purH和purD基因的表达水平均有不同程度的提高,嘌呤合成途径中关键酶PRPP转酰胺酶的活性是出发菌株的2.4倍。摇瓶发酵实验发现工程菌腺苷产量较出发菌提高17.5%,糖苷转化率增加26.1%。5 L罐发酵实验表明,虽然工程菌的菌体生长受到一定的影响,但在相同发酵周期内腺苷产量比出发菌提高了9.7%。【结论】嘌呤操纵子中purF、purM、purN、purH和purD基因转录水平的增强能够提高腺苷的产量,为通过代谢工程技术改造腺苷生产菌提供了理论依据和研究思路。     

谷氨酸棒杆菌TL1105的L-组氨酸生物合成途径分析

目的：对谷氨酸棒杆菌TL1105由葡萄糖生物合成L-组氨酸的代谢途径进行分析,以确定L-组氨酸合成的最佳途径和最大理论产率。方法：运用METATOOL软件对谷氨酸棒杆菌TL1105合成L-组氨酸进行途径分析。结果：确定了L-组氨酸合成的最佳途径,并确定最大理论产率为1．2;通过比较途径分析所获得的基础反应模型,确定了5-磷酸核糖焦磷酸是L-组氨酸合成途径的关键节点,并且确定了谷氨酸的大量合成是L-组氨酸合成的重要前提;添加谷氨酸,L-组氨酸的产量提高了39．2％。结论：以途径分析为指导,改变外界环境因子,L-组氨酸的产量得到显著的提高。     

次黄嘌呤鸟嘌呤磷酸核糖转移酶研究进展

次黄嘌呤鸟嘌呤磷酸核糖转移酶(Hypoxanthine-guanine phosphoribosyltransferase, HPRT)是一种细胞质酶, 在体内广泛存在, 它不仅参与嘌呤碱基的补救合成途径, 而且关系到嘌呤类药物的代谢, 是调控该类药物药理效应和毒性反应的关键酶。其基因突变可影响酶的活性, 不仅可能导致不同临床表现的代谢疾病的发生, 而且影响体内嘌呤类药物的代谢。同时, HPRT作为管家基因, 是诊断许多疾病的靶点基因。文章概括了HPRT研究的新进展, 通过总结国内外研究现状, 发现HPRT的研究既推动了嘌呤类药物个体化用药的发展及新药物的研发, 又促进了HPRT突变相关遗传代谢疾病的诊断和治疗。     

D-核糖生产菌的原生质体诱变及其发酵培养

目的:筛选出莽草酸、转酮醇酶双重营养缺陷型的D-核糖生产菌枯草芽胞杆菌,以提高D-核糖的产量。方法:采用化学诱变剂乙基磺酸甲烷(EMS)对野生型D-核糖生产菌的原生质体进行诱变,并从D-核糖合成途径对发酵培养基进行优化设计。结果:摇瓶发酵D-核糖平均产量为52.2g/L;获得的B.sems-10菌株具有良好的遗传稳定性,D-核糖产量高达67.5g/L。结论:通过对D-核糖生产菌原生质体的EMS诱变,筛选出了高产、遗传性状稳定的营养缺陷型B.sems-10菌株,为进一步提高产量奠定了基础。     

转谷氨酰胺酶的分子生物学与基因工程

来源于微生物特别是轮枝链霉菌的转谷氨酰胺酶是一种重要的酶制剂,在食品工业中有着广泛的应用前景。本综述了近年来对转谷氨酰胺酶的分子生物学研究成果,以及对其进行基因工程改造的最新进展,讨论了其进一步的研究发展方向。笔认为采用基因工程生产重组转谷氨酰胺酶是解决目前酶价高昂和来源困难问题的一个大有希望的办法。     

Interaction of metabolism of aspartate and inosine and energy state of malignant cells.

1. Oxidation of glutamine in Ehrlich ascites-carcinoma cells results in a large accumulation of aspartate. 2.The addition of inosine causes a marked decrease in aspartate production from glutamine. This may be related to the resynthesis of AMP from aspartate and IMP, the latter being produced from inosine via the salvage pathway for purine nucleotides. In accordance with this assumption, a significant production of lactate was observed, which comes probably from the ribose moiety of inosine. Since lactate is known to inhibit production of aspartate from glutamine, this may explain the effect of inosine. 3. Addition of glutamine together with inosine increased cellular ATP content. This was not the case if glutamine or inosine was present separately or if inosine was added together with lactate, pyruvate or glucose. The effect did not occur if amino-oxyacetate, an inhibitor of transaminases, was added. These findings suggested again that production of aspartate is important for resynthesis of ATP from IMP via the purine nucleotide cycle. 4.If the cells were exposed to prolonged anaerobic incubation, addition of glutamine and inosine markedly increased O2 uptake and [ATP], suggesting the crucial importance of aspartate production by glutamine oxidation for the recovery of energy metabolism in the cells.     

De novo engineering and metabolic flux analysis of inosine biosynthesis in <Emphasis Type="Italic">Bacillus subtilis</Emphasis>

Wild-type B. subtilis strain W168 was de novo engineered for inosine biosynthesis. Inactivation of deoD and purA led to 0.15 ± 0.04 and 6.44 ± 0.39 g inosine/l yields, respectively. The deoD purA double mutant accumulated 7.6 ± 0.34 g inosine/l, with a 4.7% (w/w) conversion ratio from glucose to inosine. Comparative metabolic flux analysis revealed that the fluxes from inosine to hypoxanthine and from inosine monophosphate to adenosine monophosphate in the double mutant decreased to 14.0 and 0.61% of those in the wild-type strain. The major role of purA was demonstrated when inactivation of deoD and purA were found to contribute additively to inosine accumulation. This work is expected to contribute to the improvement of the fermentative production of purine nucleosides in the microbial industry.     

Genetic studies on the role of the nucleoside transport function in nucleoside efflux, the inosine cycle, and purine biosynthesis.

A mutant clone (AU-100) which is 90% deficient in adenylosuccinate synthetase activity was characterized from wild-type murine S49 T-lymphoma cells. This AU-100 cell line and its hypoxanthine-guanine phosphoribosyltransferase-deficient derivative, AUTG-50B, overproduce purines severalfold and excrete massive amounts of inosine into the culture medium (Ullman et al., Proc. Natl. Acad. Sci. U.S.A. 79:5127-5131, 1982). We introduced a mutation into both of these cell lines which make them incapable of taking up nucleosides from the culture medium. The genetic deficiency in nucleoside transport prevents the adenylosuccinate synthetase-deficient AU-100 cells from excreting inosine. Because of an extremely efficient intracellular inosine salvage system, the nucleoside transport-deficient AU-100 cells also no longer overproduce purines. AUTG-50B cells which have been made genetically deficient in nucleoside transport still overproduce purines but excrete hypoxanthine rather than inosine. These studies demonstrate genetically that nucleoside transport and nucleoside efflux share a common component and that nucleoside transport has an important regulatory function which profoundly affects the rates of purine biosynthesis and purine salvage.     

Structural bioinformatics study of PNP from Schistosoma mansoni

The parasite Schistosoma mansoni lacks the de novo pathway for purine biosynthesis and depends on salvage pathways for its purine requirements. Schistosomiasis is endemic in 76 countries and territories and amongst the parasitic diseases ranks second after malaria in terms of social and economic impact and public health importance. The PNP is an attractive target for drug design and it has been submitted to extensive structure-based design. The atomic coordinates of the complex of human PNP with inosine were used as template for starting the modeling of PNP from S. mansoni complexed with inosine. Here we describe the model for the complex SmPNP-inosine and correlate the structure with differences in the affinity for inosine presented by human and S. mansoni PNPs.     

Stimulation of phosphoribosyl pyrophosphate and purine nucleotide production by pyrroline 5-carboxylate in human erythrocytes

Recent studies have shown that pyrroline 5-carboxylate, the intermediate in the interconversions of proline, ornithine, and glutamate, can regulate the metabolism of erythrocytes. We now report that the formation of 5-phosphoribosyl 1-pyrophosphate (PP-Rib-P) was markedly stimulated by pyrroline 5-carboxylate in intact red cells. The production of PP-Rib-P is an important point of regulation in nucleotide metabolism. We found that pyrroline 5-carboxylate increased glucose metabolism through the oxidative arm of the pentose shunt, ribose 5-phosphate formation, and PP-Rib-P production and subsequently augmented purine nucleotide production through the salvage pathway in erythrocytes. We now report that pyrroline 5-carboxylate markedly stimulated the net synthesis of inosine monophosphate from hypoxanthine in intact human red cells so that the pool of inosine monophosphate became 20-30% of the total pool of purine nucleotides. Inosine monophosphate has been considered to be a "mobile pool" of purines, i.e. a reservoir from which peripheral tissues can be supplied; the effect of pyrroline 5-carboxylate on the inosine monophosphate pool may be a mechanism for regulating the function of erythrocytes in purine delivery.     

An enzyme study of purine nucleotide biosynthesis in the plerocercoids of cestodes in the fam. Ligulidae]

By means of spectrophotometric method there was determined the activity of three enzymes of biosynthesis of purine nucleotides: amino imidazole ribonucleotide-carboxylase (AIR-carboxylase, EC 4.1.1.21), an enzyme of biosynthesis of purine nucleotides de novo in plerocercoids of Schistocephalus pungitii and Digramma interrupta; inosine monophosphate-dehydrogenase (IMPh-dehydrogenase, EC 1.2.1.14), an enzyme of salvage path, and adenylosuccinate lyase (EC 4.3.2.2), an enzyme taking part both in biosynthesis de novo and salvage in plerocercoids of Schistocephalus pungitii. The activity of AIR-carboxylase was not determined. Specific activities of adenylosuccinate lyase and IMPh-dehydrogenase amount to (1.3 +/- 0.3) x 10(-3) and (1.2 +/- 0.4) x 10(-3) mumole/min.mg protein, respectively. The activity of the three enzymes was determined in the liver of ten-spined stickleback, a host of S. pungitii plerocercoids. The question of metabolic dependence of Ligulidae plerocercoids on hosts to provide for purine bases is discussed.     

Ecto-5'-nucleotidase can provide the total purine requirements of mitogen-stimulated human T cells and rapidly dividing human B lymphoblastoid cells

The ability of mitogen-stimulated human T cells or rapidly dividing human B lymphoblastoid cells to drive their total purine requirements from inosine 5'-monophosphate, inosine, or hypoxanthine was compared. Inosine 5'-monophosphate first must be converted to inosine by the action of the enzyme ecto-5'-nucleotidase before it can be transported into the cell; inosine and hypoxanthine, however, can be transported directly. Mitogen-stimulated human peripheral blood T cells were treated with aminopterin to inhibit purine synthesis de novo and to make the cells dependent on an exogenous purine source. Thymidine was added as a source of pyrimidines. Under these conditions, 30 microM inosine 5'-monophosphate, inosine, and hypoxanthine showed comparable abilities to support [3H]thymidine incorporation into DNA or [3H]leucine incorporation into protein at rates equal to that of untreated control cultures. Similar results were found when azaserine was used to inhibit purine synthesis de novo, and thus DNA synthesis. In parallel experiments with the rapidly dividing human B lymphoblastoid cell line WI-L2, treatment with aminopterin (plus thymidine) inhibited the growth rate by greater than 95%. The normal growth rate was restored by the addition of 30 microM inosine 5'-monophosphate, inosine, or hypoxanthine to the medium. However, in similar experiments with cell line 1254, a derivative of WI-L2 which lacks detectable ecto-5'-nucleotidase activity, inosine and hypoxanthine (plus thymidine), but not inosine 5'-monophosphate (and thymidine) were able to restore the growth inhibition due to aminopterin. These results show that the catalytic activity of ecto-5'-nucleotidase is sufficient to meet the total purine requirements of mitogen-stimulated human T cells or rapidly dividing human B lymphoblastoid cells, and suggest that this enzyme may be important for purine salvage when rates of purine synthesis de novo are limited and/or an extracellular source of purine nucleotides is available.     

Profiles of purine metabolism in leaves and roots of Camellia sinensis seedlings

To determine the metabolic profiles of purine nucleotides and related compounds in leaves and roots of tea (Camellia sinensis), we studied the in situ metabolic fate of 10 different (14)C-labeled precursors in segments from tea seedlings. The activities of key enzymes in tea leaf extracts were also investigated. The rates of uptake of purine precursors were greater in leaf segments than in root segments. Adenine and adenosine were taken up more rapidly than other purine bases and nucleosides. Xanthosine was slowest. Some adenosine, guanosine and inosine was converted to nucleotides by adenosine kinase and inosine/guanosine kinase, but these compounds were easily hydrolyzed, and adenine, guanine and hypoxanthine were generated. These purine bases were salvaged by adenine phosphoribosyltransferase and hypoxanthine/guanine phosphoribosyltransferase. Salvage activity of adenine and adenosine was high, and they were converted exclusively to nucleotides. Inosine and hypoxanthine were salvaged to a lesser extent. In situ (14)C-tracer experiments revealed that xanthosine and xanthine were not salvaged, although xanthine phosphoribosyltransferase activity was found in tea extracts. Only some deoxyadenosine and deoxyguanosine was salvaged and utilized for DNA synthesis. However, most of these deoxynucleosides were hydrolyzed to adenine and guanine and then utilized for RNA synthesis. Purine alkaloid biosynthesis in leaves is much greater than in roots. In situ experiments indicate that adenosine, adenine, guanosine, guanine and inosine are better precursors than xanthosine, which is a direct precursor of a major pathway of caffeine biosynthesis. Based on these results, possible routes of purine metabolism are discussed.     

Metabolic capacity of Bacillus subtilis for the production of purine nucleosides, riboflavin, and folic acid

We developed a stoichiometric model of Bacillus subtilis metabolism for quantitative analysis of theoretical growth and biochemicals production capacity. This work concentrated on biochemicals that are derived from the purine biosynthesis pathway; inosine, guanosine, riboflavin, and folic acid. These are examples of commercially relevant biochemicals for which Bacillus species are commonly used production hosts. Two previously unrecognized, but highly desirable properties of good producers of purine pathway-related biochemicals have been identified for optimally engineered product biosynthesis; high capacity for reoxidation of NADPH and high bioenergetic efficiency. Reoxidation of NADPH, through the transhydrogenase or otherwise, appears to be particularly important for growth on glucose, as deduced from the corresponding optimal carbon flux distribution. The importance of cellular energetics on optimal performance was quantitatively assessed by including a bioenergetic efficiency parameter as an unrestricted, ATP dissipating flux in the simulations. An estimate for the bioenergetic efficiency was generated by fitting the model to experimentally determined growth yields. The results show that the maximum theoretical yields of all products studied are limited by pathway stoichiometry at high bioenergetic efficiencies. Simulations with the estimated bioenergetic efficiency of B. subtilis, growing under glucose-limiting conditions, indicate that the yield of these biochemicals is primarily limited by energy and thus is very sensitive to the process conditions. The maximum yields that can reasonably be expected with B. subtilis on glucose were estimated to be 0.343, 0.160, and 0.161 (mol product/mol glucose) for purine nucleosides, riboflavin, and folic acid, respectively. Potential strategies for improving these maximum yields are discussed.     

Purine Uptake and Utilization by the Avian Malaria Parasite Plasmodium lophurae*

SYNOPSIS. Plasmodium lophurae cannot carry out extensive de novo purine biosynthesis, and depends upon the host erythrocyte for a supply of preformed purines. Exogenous purines taken up by the parasitized erythrocyte may constitute a major source of preformed purines for parasite nucleotide biosynthesis. The uptake of exogenous radioactive purine compounds and their incorporation into nucleic acids by duck erythrocytes parasitized with P. lophurae, uninfected erythrocytes, and erythrocyte-free parasites were studied. P. lophurae was found to have a remarkable ability, both intracellularly and extracellularly, to take up and utilize certain exogenous purines such as adenosine, inosine, and hypoxanthine. Incorporation studies indicated that this species has a functional purine salvage pathway by which inosine, hypoxanthine, and adenosine can be converted to both adenine and guanine nucleotides.