Nutrient fluxes and water quality in the drainage network of the Scheldt basin over the last 50 years

and use and urban activity in the catchment of the Scheldt river system have deeply changed during the last 50 years, modifying in turn the water quality of the drainage network and the fluxes of nutrient transferred to the estuary and to the sea. Based on the RIVERSTRAHLER model, developed for establishing the link between the biogeochemical functioning of large river systems and the constraints set by the meteorology, the morphology of the drainage network and the human activity in the watershed, we reassembled the data available to document these constraints in the Scheldt basin since the last half of the XXth century and we used them to reconstruct the variations of nutrient and oxygen concentrations at the outlet of the Scheldt drainage network. We compared the results with the water quality data at the entrance of the estuarine zone available since the 1960s. Both model results and observational data show a very severe deterioration of water quality (with deep oxygen depletion) in the beginning of the 1960s, while a clear trend to improvement is apparent since the late 1980s. The budget of nutrient loadings from the watershed, retention within the drainage network and delivery to the estuarine zone is established on an annual basis for the 50 last years. The yearly fluxes of nutrient delivered by the river to the estuary and the sea show a severe depletion of silica with respect to nitrogen compared with the requirements of diatoms, and a clear shift from the early 1990s from nitrogen to phosphorus potential limitation. Seasonal variations of nutrient delivery are however much more pronounced for nitrogen, with much less inputs during the dry seasons, while phosphorus inputs, mainly from point sources are more constant, so that nitrogen limitation can still occur during summer. Compared with similar budget estimations carried out for the Seine river system, the Scheldt basin, in spite of its much higher population density, does not deliver higher specific fluxes of nutrient (presently about 2000 kgN/km²/yr, 80 kgP/km²/yr and 1000 kgSi/km²/yr), owing to very efficient processes of nutrient retention.     

Net uptake of atmospheric CO2 by coastal submerged aquatic vegetation

‘Blue Carbon’, which is carbon captured by marine living organisms, has recently been highlighted as a new option for climate change mitigation initiatives. In particular, coastal ecosystems have been recognized as significant carbon stocks because of their high burial rates and long‐term sequestration of carbon. However, the direct contribution of Blue Carbon to the uptake of atmospheric CO₂ through air‐sea gas exchange remains unclear. We performed in situ measurements of carbon flows, including air‐sea CO₂ fluxes, dissolved inorganic carbon changes, net ecosystem production, and carbon burial rates in the boreal (Furen), temperate (Kurihama), and subtropical (Fukido) seagrass meadows of Japan from 2010 to 2013. In particular, the air‐sea CO₂ flux was measured using three methods: the bulk formula method, the floating chamber method, and the eddy covariance method. Our empirical results show that submerged autotrophic vegetation in shallow coastal waters can be functionally a sink for atmospheric CO_2. This finding is contrary to the conventional perception that most near‐shore ecosystems are sources of atmospheric CO₂. The key factor determining whether or not coastal ecosystems directly decrease the concentration of atmospheric CO₂ may be net ecosystem production. This study thus identifies a new ecosystem function of coastal vegetated systems; they are direct sinks of atmospheric CO₂.     

Partitioning net ecosystem carbon exchange with isotopic fluxes of CO2

Because biological and physical processes alter the stable isotopic composition of atmospheric CO₂, variations in isotopic content can be used to investigate those processes. Isotopic flux measurements of ¹³CO₂ above terrestrial ecosystems can potentially be used to separate net ecosystem CO₂ exchange (NEE) into its component fluxes, net photosynthetic assimilation (F_A) and ecosystem respiration (F_R). In this paper theory is developed to partition measured NEE into F_A and F_R, using measurements of fluxes of CO₂ and ¹³CO₂, and isotopic composition of respired CO₂ and forest air. The theory is then applied to fluxes measured (or estimated, for ¹³CO₂) in a temperate deciduous forest in eastern Tennessee (Walker Branch Watershed). It appears that there is indeed enough additional information in ¹³CO₂ fluxes to partition NEE into its photosynthetic and respiratory components. Diurnal patterns in F_A and F_R were obtained, which are consistent in magnitude and shape with patterns obtained from NEE measurements and an exponential regression between night‐time NEE and temperature (a standard technique which provides alternate estimates of F_R and F_A). The light response curve for photosynthesis (F_A vs. PAR) was weakly nonlinear, indicating potential for saturation at high light intensities. Assimilation‐weighted discrimination against ¹³CO₂ for this forest during July 1999 was 16.8–17.1‰, depending on canopy conductance. The greatest uncertainties in this approach lie in the evaluation of canopy conductance and its effect on whole‐canopy photosynthetic discrimination, and thus the indirect methods used to estimate isotopic fluxes. Direct eddy covariance measurements of ¹³CO₂ flux are needed to assess the validity of the assumptions used and provide defensible isotope‐based estimates of the component fluxes of net ecosystem exchange.     

Phaeocystis colony distribution in the North Atlantic Ocean since 1948, and interpretation of long-term changes in the Phaeocystis hotspot in the North Sea

Monitoring of Phaeocystis since 1948 during the Continuous Plankton Recorder survey indicates that over the last 5.5 decades the distribution of its colonies in the North Atlantic Ocean was not restricted to neritic waters: occurrence was also recorded in the open Atlantic regions sampled, most frequently in the spring. Apparently, environmental conditions in open ocean waters, also those far offshore, are suitable for complete lifecycle development of colonies (the only stage recorded in the survey). In the North Sea the frequency of occurrence was also highest in spring. Its southeastern part was the Phaeocystis abundance hotspot of the whole area covered by the survey. Frequency was especially high before the 1960s and after the 1980s, i.e., in the periods when anthropogenic nutrient enrichment was relatively low. Changes in eutrophication have obviously not been a major cause of long-term Phaeocystis variation in the southeastern North Sea, where total phytoplankton biomass was related significantly to river discharge. Evidence is presented for the suggestion that Phaeocystis abundance in the southern North Sea is to a large extent determined by the amount of Atlantic Ocean water flushed in through the Dover Strait. Since Phaeocystis plays a key role in element fluxes relevant to climate the results presented here have implications for biogeochemical models of cycling of carbon and sulphur. Sea-to-air exchange of CO₂ and dimethyl sulphide (DMS) has been calculated on the basis of measurements during single-year cruises. The considerable annual variation in phytoplankton and in its Phaeocystis component reported here does not warrant extrapolation of such figures.     

Woody biomass production during the second rotation of a bio-energy Populus plantation increases in a future high CO2 world

The quickly rising atmospheric carbon dioxide (CO₂)‐levels, justify the need to explore all carbon (C) sequestration possibilities that might mitigate the current CO₂ increase. Here, we report the likely impact of future increases in atmospheric CO₂ on woody biomass production of three poplar species (Populus alba L. clone 2AS‐11, Populus nigra L. clone Jean Pourtet and Populus×euramericana clone I‐214). Trees were growing in a high‐density coppice plantation during the second rotation (i.e., regrowth after coppice; 2002–2004; POPFACE/EUROFACE). Six plots were studied, half of which were continuously fumigated with CO₂ (FACE; free air carbon dioxide enrichment of 550 ppm). Half of each plot was fertilized to study the interaction between CO₂ and nutrient fertilization. At the end of the second rotation, selective above‐ and belowground harvests were performed to estimate the productivity of this bio‐energy plantation. Fertilization did not affect growth of the poplar trees, which was likely because of the high rates of fertilization during the previous agricultural land use. In contrast, elevated CO₂ enhanced biomass production by up to 29%, and this stimulation did not differ between above‐ and belowground parts. The increased initial stump size resulting from elevated CO₂ during the first rotation (1999–2001) could not solely explain the observed final biomass increase. The larger leaf area index after canopy closure and the absence of any major photosynthetic acclimation after 6 years of fumigation caused the sustained CO₂‐induced biomass increase after coppice. These results suggest that, under future CO₂ concentrations, managed poplar coppice systems may exhibit higher potential for C sequestration and, thus, help mitigate climate change when used as a source of C‐neutral energy.     

Role of land cover changes for atmospheric CO2 increase and climate change during the last 150 years

We assess the role of changing natural (volcanic, aerosol, insolation) and anthropogenic (CO₂ emissions, land cover) forcings on the global climate system over the last 150 years using an earth system model of intermediate complexity, CLIMBER‐2. We apply several datasets of historical land‐use reconstructions: the cropland dataset by Ramankutty & Foley (1999) (R&F), the HYDE land cover dataset of Klein Goldewijk (2001) , and the land‐use emissions data from Houghton & Hackler (2002) . Comparison between the simulated and observed temporal evolution of atmospheric CO₂ and δ¹³CO₂ are used to evaluate these datasets. To check model uncertainty, CLIMBER‐2 was coupled to the more complex Lund–Potsdam–Jena (LPJ) dynamic global vegetation model. In simulation with R&F dataset, biogeophysical mechanisms due to land cover changes tend to decrease global air temperature by 0.26°C, while biogeochemical mechanisms act to warm the climate by 0.18°C. The net effect on climate is negligible on a global scale, but pronounced over the land in the temperate and high northern latitudes where a cooling due to an increase in land surface albedo offsets the warming due to land‐use CO₂ emissions. Land cover changes led to estimated increases in atmospheric CO₂ of between 22 and 43 ppmv. Over the entire period 1800–2000, simulated δ¹³CO₂ with HYDE compares most favourably with ice core during 1850–1950 and Cape Grim data, indicating preference of earlier land clearance in HYDE over R&F. In relative terms, land cover forcing corresponds to 25–49% of the observed growth in atmospheric CO₂. This contribution declined from 36–60% during 1850–1960 to 4–35% during 1960–2000. CLIMBER‐2‐LPJ simulates the land cover contribution to atmospheric CO₂ growth to decrease from 68% during 1900–1960 to 12% in the 1980s. Overall, our simulations show a decline in the relative role of land cover changes for atmospheric CO₂ increase during the last 150 years.     

Evaporation and carbonic anhydrase activity recorded in oxygen isotope signatures of net CO2 fluxes from a Mediterranean soil

The oxygen stable isotope composition (δ¹⁸O) of CO₂ is a valuable tool for studying the gas exchange between terrestrial ecosystems and the atmosphere. In the soil, it records the isotopic signal of water pools subjected to precipitation and evaporation events. The δ¹⁸O of the surface soil net CO₂ flux is dominated by the physical processes of diffusion of CO₂ into and out of the soil and the chemical reactions during CO₂–H₂O equilibration. Catalytic reactions by the enzyme carbonic anhydrase, reducing CO₂ hydration times, have been proposed recently to explain field observations of the δ¹⁸O signatures of net soil CO₂ fluxes. How important these catalytic reactions are for accurately predicting large‐scale biosphere fluxes and partitioning net ecosystem fluxes is currently uncertain because of the lack of field data. In this study, we determined the δ¹⁸O signatures of net soil CO₂ fluxes from soil chamber measurements in a Mediterranean forest. Over the 3 days of measurements, the observed δ¹⁸O signatures of net soil CO₂ fluxes became progressively enriched with a well‐characterized diurnal cycle. Model simulations indicated that the δ¹⁸O signatures recorded the interplay of two effects: (1) progressive enrichment of water in the upper soil by evaporation, and (2) catalytic acceleration of the isotopic exchange between CO₂ and soil water, amplifying the contributions of ‘atmospheric invasion’ to net signatures. We conclude that there is a need for better understanding of the role of enzymatic reactions, and hence soil biology, in determining the contributions of soil fluxes to oxygen isotope signals in atmospheric CO₂.     

Gypsy moth feeding in the canopy of a CO2-enriched mature forest

Rising atmospheric carbon dioxide (CO₂) concentration is expected to change plant tissue quality with important implications for plant–insect interactions. Taking advantage of canopy access by a crane and long‐term CO₂ enrichment (530 μ mol mol^?1) of a natural old‐growth forest (web‐free air carbon dioxide enrichment), we studied the responses of a generalist insect herbivore feeding in the canopy of tall trees. We found that relative growth rates (RGR) of gypsy moth (Lymantria dispar) were reduced by 30% in larvae fed on high CO₂‐exposed Quercus petraea, but increased by 29% when fed on high CO₂‐grown Carpinus betulus compared with control trees at ambient CO₂ (370 μ mol mol^?1). In Fagus sylvatica, there was a nonsignificant trend for reduced RGR under elevated CO₂. Tree species‐specific changes in starch to nitrogen ratio, water, and the concentrations of proteins, condensed and hydrolyzable tannins in response to elevated CO₂ were identified to correlate with altered RGR of gypsy moth larvae. Our data suggest that rising atmospheric CO₂ will have strong species‐specific effects on leaf chemical composition of canopy trees in natural forests leading to contrasting responses of herbivores such as those reported here. A future change in host tree preference seems likely with far‐ranging consequences for forest community dynamics.     

Laboratory incubations reveal potential responses of soil nitrogen cycling to changes in soil C and N availability in Mojave Desert soils exposed to elevated atmospheric CO2

Elevated atmospheric carbon dioxide (CO₂) has the potential to alter soil carbon (C) and nitrogen (N) cycling in arid ecosystems through changes in net primary productivity. However, an associated feedback exists because any sustained increases in plant productivity will depend upon the continued availability of soil N. We took soils from under the canopies of major shrubs, grasses, and plant interspaces in a Mojave Desert ecosystem exposed to elevated atmospheric CO₂ and incubated them in the laboratory with amendments of labile C and N to determine if elevated CO₂ altered the mechanistic controls of soil C and N on microbial N cycling. Net ammonification increased under shrubs exposed to elevated CO₂, while net nitrification decreased. Elevated CO₂ treatments exhibited greater fluxes of N₂O–N under Lycium spp., but not other microsites. The proportion of microbial/extractable organic N increased under shrubs exposed to elevated CO₂. Heterotrophic N₂‐fixation and C mineralization increased with C addition, while denitrification enzyme activity and N₂O–N fluxes increased when C and N were added in combination. Laboratory results demonstrated the potential for elevated CO₂ to affect soil N cycling under shrubs and supports the hypothesis that energy limited microbes may increase net inorganic N cycling rates as the amount of soil‐available C increases under elevated CO₂. The effect of CO₂ enrichment on N‐cycling processes is mediated by its effect on the plants, particularly shrubs. The potential for elevated atmospheric CO₂ to lead to accumulation of NH₄⁺ under shrubs and the subsequent volatilization of NH₃ may result in greater losses of N from this system, leading to changes in the form and amount of plant‐available inorganic N. This introduces the potential for a negative feedback mechanism that could act to constrain the degree to which plants can increase productivity in the face of elevated atmospheric CO₂.     

Potassium limits potential growth of bog vegetation under elevated atmospheric CO2 and N deposition

The free air carbon dioxide enrichment (FACE) and N deposition experiments on four ombrotrophic bogs in Finland, Sweden, the Netherlands and Switzerland, revealed that after three years of treatment: (1) elevated atmospheric CO₂ concentration had no significant effect on the biomass growth of Sphagnum and vascular species; and (2) increased N deposition reduced Sphagnum growth, because it increased the cover of vascular plants and the tall moss Polytrichum strictum, while vascular plant biomass growth was not affected. This paper focuses on water chemistry, plant nutrient content, and litter decomposition rates. Potassium limitation, or low supply of K and P, may have prevented a significant increase of Sphagnum growth under elevated CO₂ and N deposition. Vascular plant growth under elevated CO₂ and N deposition was also limited by K, or by K in combination with P or N (N in CO₂ experiment). Elevated CO₂ and N deposition had no effect on decomposition rates of Sphagnum and vascular plant litter. Aside from a possible effect of N deposition on light competition between species, we expect that elevated atmospheric CO₂ and N deposition concentrations will not affect Sphagnum and vascular plant growth in bogs of north‐west Europe due to K‐, or K in combination with N‐ or P‐, limited growth. For the same reason we expect no effect of elevated CO₂ and N deposition on litter decomposition. Net primary production of raised ombrotrophic bogs that are at or close to steady state, is regulated by input of nutrients through atmospheric deposition. Therefore, we hypothesize that the expected increase of plant growth under elevated CO₂ and N deposition is diminished by current levels of K (and to some extent P and N) in atmospheric deposition.     

Downward adjustment of carbon fluxes at the biochemical, leaf, and ecosystem scale in beech-spruce model communities exposed to long-term atmospheric CO2 enrichment

Young beech (Fagus sylvatica) and spruce (Picea abies) trees from different provenances or genotypes were grown in competition in large model ecosystems and were exposed to two concentrations of atmospheric CO₂ (370 vs 570 μmol mol^?1), two levels of wet nitrogen deposition (7 vs 70 kg N ha^?1 yr^?1), and two native forest soils (acidic vs calcareous) for four years in open‐top chambers. The 2×2×2 factorial experimental design was fully replicated (n=4) with each CO₂×N combination applied to each soil type. Exposure to atmospheric CO₂ enrichment stimulated daytime net ecosystem CO₂ flux (NEC) as measured during sunny days in the middle of the third growing season. Nevertheless, we observed substantial down‐regulation of NEC, with larger adjustments on acidic than on calcareous soil. NEC adjustment was associated with slightly reduced leaf area index (LAI) on the acidic soil (no response on calcareous soil), enhanced soil CO₂ efflux from both substrate types, and, most importantly, with down‐regulation of CO₂ uptake at the leaf scale. Downward adjustment of light‐saturated single‐leaf photosynthesis (A) and of Rubisco was more pronounced in beech than in spruce and these species‐specific differences increased over time. By year four, A adjustment (except in one specific treatment combination in each species) had become complete in beech but had disappeared in spruce. At no time did we observe a genotype or provenance effect on the downward adjustment of carbon fluxes, and nitrogen deposition rate generally had little effect as well. Overall, our results suggest that tree species and soil quality will have profound effects on ecosystem CO₂ fluxes under continued atmospheric CO₂ enrichment.     

Carbon limitation of soil respiration under winter snowpacks: potential feedbacks between growing season and winter carbon fluxes

A reduction in the length of the snow‐covered season in response to a warming of high‐latitude and high‐elevation ecosystems may increase soil carbon availability both through increased litter fall following longer growing seasons and by allowing early winter soil frosts that lyse plant and microbial cells. To evaluate how an increase in labile carbon during winter may affect ecosystem carbon balance we investigated the relationship between carbon availability and winter CO₂ fluxes at several locations in the Colorado Rockies. Landscape‐scale surveys of winter CO₂ fluxes from sites with different soil carbon content indicated that winter CO₂ fluxes were positively related to carbon availability and experimental additions of glucose to soil confirmed that CO₂ fluxes from snow‐covered soil at temperatures between 0 and ?3°C were carbon limited. Glucose added to snow‐covered soil increased CO₂ fluxes by 52–160% relative to control sites within 24 h and remained 62–70% higher after 30 days. Concurrently a shift in the δ¹³C values of emitted CO₂ toward the glucose value indicated preferential utilization of the added carbon confirming the presence of active heterotrophic respiration in soils at temperatures below 0°C. The sensitivity of these winter fluxes to substrate availability, coupled with predicted changes in winter snow cover, suggests that feedbacks between growing season carbon uptake and winter heterotrophic activity may have unforeseen consequences for carbon and nutrient cycling in northern forests. For example, published winter CO₂ fluxes indicate that on average 50% of growing season carbon uptake currently is respired during the winter; changes in winter CO₂ flux in response to climate change have the potential to reduce substantially the net carbon sink in these ecosystems.     

Ocean acidification and warming will lower coral reef resilience

Ocean warming and acidification from increasing levels of atmospheric CO₂ represent major global threats to coral reefs, and are in many regions exacerbated by local‐scale disturbances such as overfishing and nutrient enrichment. Our understanding of global threats and local‐scale disturbances on reefs is growing, but their relative contribution to reef resilience and vulnerability in the future is unclear. Here, we analyse quantitatively how different combinations of CO₂ and fishing pressure on herbivores will affect the ecological resilience of a simplified benthic reef community, as defined by its capacity to maintain and recover to coral‐dominated states. We use a dynamic community model integrated with the growth and mortality responses for branching corals (Acropora) and fleshy macroalgae (Lobophora). We operationalize the resilience framework by parameterizing the response function for coral growth (calcification) by ocean acidification and warming, coral bleaching and mortality by warming, macroalgal mortality by herbivore grazing and macroalgal growth via nutrient loading. The model was run for changes in sea surface temperature and water chemistry predicted by the rise in atmospheric CO₂ projected from the IPCC's fossil‐fuel intensive A1FI scenario during this century. Results demonstrated that severe acidification and warming alone can lower reef resilience (via impairment of coral growth and increased coral mortality) even under high grazing intensity and low nutrients. Further, the threshold at which herbivore overfishing (reduced grazing) leads to a coral–algal phase shift was lowered by acidification and warming. These analyses support two important conclusions: Firstly, reefs already subjected to herbivore overfishing and nutrification are likely to be more vulnerable to increasing CO₂. Secondly, under CO₂ regimes above 450–500 ppm, management of local‐scale disturbances will become critical to keeping reefs within an Acropora‐rich domain.     

Biomass allocation in old-field annual species grown in elevated CO2 environments: no evidence for optimal partitioning

Increased atmospheric carbon dioxide supply is predicted to alter plant growth and biomass allocation patterns. It is not clear whether changes in biomass allocation reflect optimal partitioning or whether they are a direct effect of increased growth rates. Plasticity in growth and biomass allocation patterns was investigated at two concentrations of CO₂ ([CO₂]) and at limiting and nonlimiting nutrient levels for four fast‐ growing old‐field annual species. Abutilon theophrasti, Amaranthus retroflexus, Chenopodium album, and Polygonum pensylvanicum were grown from seed in controlled growth chamber conditions at current (350 μmol mol^?1, ambient) and future‐ predicted (700 μmol mol^?1, elevated) CO₂ levels. Frequent harvests were used to determine growth and biomass allocation responses of these plants throughout vegetative development. Under nonlimiting nutrient conditions, whole plant growth was increased greatly under elevated [CO₂] for three C3 species and moderately increased for a C4 species (Amaranthus). No significant increases in whole plant growth were observed under limiting nutrient conditions. Plants grown in elevated [CO₂] had lower or unchanged root:shoot ratios, contrary to what would be expected by optimal partitioning theory. These differences disappeared when allometric plots of the same data were analysed, indicating that CO₂‐induced differences in root:shoot allocation were a consequence of accelerated growth and development rates. Allocation to leaf area was unaffected by atmospheric [CO₂] for these species. The general lack of biomass allocation responses to [CO₂] availability is in stark contrast with known responses of these species to light and nutrient gradients. We conclude that biomass allocation responses to elevated atmospheric [CO₂] are not consistent with optimal partitioning predictions.     

Distribution and air-water exchange of carbon dioxide in the Scheldt plume off the Belgian coast

In the present paper we report partial pressureof CO₂ (pCO₂) data obtained off theBelgian coast during 24 cruises. The temporaland spatial resolution of this data set allowsus to discuss satisfactorily seasonal andinter-annual variability of pCO₂ in thestudy area. The dynamics of pCO₂ aredescribed using two approaches: fixed referencestations and area survey cruises. The air-waterfluxes of CO₂ in the Scheldt estuarineplume and in the outer-plume region areestimated quantitatively, showing that theseareas correspond respectively to a net annualsource and sink of atmospheric CO₂. Theannually integrated air-water fluxes for theScheldt estuarine plume range between +1.1 and+1.9 mol m^–2 year^–1 as a function ofthe formulation of the exchange coefficient ofCO₂. The annual net emission of CO₂from the estuarine plume to the atmosphere isestimated to be between +2.3 to +4.0 Gmolyear^–1 which represents 17 to 29% of theestimate reported in the literature for the Scheldtinner estuary.     

Effects of elevated CO2 on fine root dynamics in a Mojave Desert community: a FACE study

Fine roots (≤1 mm diameter) are critical in plant water and nutrient absorption, and it is important to understand how rising atmospheric CO₂ will affect them as part of terrestrial ecosystem responses to global change. This study's objective was to determine the effects of elevated CO₂ on production, mortality, and standing crops of fine root length over 2 years in a free‐air CO₂ enrichment (FACE) facility in the Mojave Desert of southern Nevada, USA. Three replicate 25 m diameter FACE rings were maintained at ambient (～370 μmol mol^?1) and elevated CO₂ (～550 μmol mol^?1) atmospheric concentrations. Twenty‐eight minirhizotron tubes were placed in each ring to sample three microsite locations: evergreen Larrea shrubs, drought‐deciduous Ambrosia shrubs, and along systematic community transects (primarily in shrub interspaces which account for ～85% of the area). Seasonal dynamics were similar for ambient and elevated CO₂: fine root production peaked in April–June, with peak standing crop occurring about 1 month later, and peak mortality occurring during the hot summer months, with higher values for all three measures in a wet year compared with a dry year. Fine root standing crop, production, and mortality were not significantly different between treatments except standing crop along community transects, where fine root length was significantly lower in elevated CO₂. Fine root turnover (annual cumulative mortality/mean standing crop) ranged from 2.33 to 3.17 year^?1, and was not significantly different among CO₂ treatments, except for community transect tubes where it was significantly lower for elevated CO₂. There were no differences in fine root responses to CO₂ between evergreen (Larrea) and drought‐deciduous (Ambrosia) shrubs. Combined with observations of increased leaf‐level water‐use efficiency and lack of soil moisture differences, these results suggest that under elevated CO₂ conditions, reduced root systems (compared with ambient CO₂) appear sufficient to provide resources for modest aboveground production increases across the community, but in more fertile shrub microsites, fine root systems of comparable size with those in ambient CO₂ were required to support the greater aboveground production increases. For community transects, development of the difference in fine root standing crops occurred primarily through lower stimulation of fine root production in the elevated CO₂ treatment during periods of high water availability.     

Photosynthetic responses of two eucalypts to industrial‐age changes in atmospheric [CO2] and temperature

The unabated rise in atmospheric [CO₂] is associated with increased air temperature. Yet, few CO₂‐enrichment studies have considered pre‐industrial [CO₂] or warming. Consequently, we quantified the interactive effects of growth [CO₂] and temperature on photosynthesis of faster‐growing Eucalyptus saligna and slower‐growing E. sideroxylon. Well‐watered and ‐fertilized tree seedlings were grown in a glasshouse at three atmospheric [CO₂] (290, 400, and 650 µL L^?1), and ambient (26/18 °C, day/night) and high (ambient + 4 °C) air temperature. Despite differences in growth rate, both eucalypts responded similarly to [CO₂] and temperature treatments with few interactive effects. Light‐saturated photosynthesis (A_sat) and light‐ and [CO₂]‐saturated photosynthesis (A_max) increased by ～50% and ～10%, respectively, with each step‐increase in growth [CO₂], underpinned by a corresponding 6–11% up‐regulation of maximal electron transport rate (J_max). Maximal carboxylation rate (V_cmax) was not affected by growth [CO₂]. Thermal photosynthetic acclimation occurred such that A_sat and A_max were similar in ambient‐ and high‐temperature‐grown plants. At high temperature, the thermal optimum of A_sat increased by 2–7 °C across [CO₂] treatments. These results are the first to suggest that photosynthesis of well‐watered and ‐fertilized eucalypt seedlings will remain strongly responsive to increasing atmospheric [CO₂] in a future, warmer climate.     

Aquatic carbon fluxes dampen the overall variation of net ecosystem productivity in the Amazon basin: An analysis of the interannual variability in the boundless carbon cycle

The river–floodplain network plays an important role in the carbon (C) cycle of the Amazon basin, as it transports and processes a significant fraction of the C fixed by terrestrial vegetation, most of which evades as CO₂ from rivers and floodplains back to the atmosphere. There is empirical evidence that exceptionally dry or wet years have an impact on the net C balance in the Amazon. While seasonal and interannual variations in hydrology have a direct impact on the amounts of C transferred through the river–floodplain system, it is not known how far the variation of these fluxes affects the overall Amazon C balance. Here, we introduce a new wetland forcing file for the ORCHILEAK model, which improves the representation of floodplain dynamics and allows us to closely reproduce data‐driven estimates of net C exports through the river–floodplain network. Based on this new wetland forcing and two climate forcing datasets, we show that across the Amazon, the percentage of net primary productivity lost to the river–floodplain system is highly variable at the interannual timescale, and wet years fuel aquatic CO₂ evasion. However, at the same time overall net ecosystem productivity (NEP) and C sequestration are highest during wet years, partly due to reduced decomposition rates in water‐logged floodplain soils. It is years with the lowest discharge and floodplain inundation, often associated with El Nino events, that have the lowest NEP and the highest total (terrestrial plus aquatic) CO₂ emissions back to atmosphere. Furthermore, we find that aquatic C fluxes display greater variation than terrestrial C fluxes, and that this variation significantly dampens the interannual variability in NEP of the Amazon basin. These results call for a more integrative view of the C fluxes through the vegetation‐soil‐river‐floodplain continuum, which directly places aquatic C fluxes into the overall C budget of the Amazon basin.     

Elevated CO2 increases microbial carbon substrate use and nitrogen cycling in Mojave Desert soils

Identifying soil microbial responses to anthropogenically driven environmental changes is critically important as concerns intensify over the potential degradation of ecosystem function. We assessed the effects of elevated atmospheric CO₂ on microbial carbon (C) and nitrogen (N) cycling in Mojave Desert soils using extracellular enzyme activities (EEAs), community‐level physiological profiles (CLPPs), and gross N transformation rates. Soils were collected from unvegetated interspaces between plants and under the dominant shrub (Larrea tridentata) during the 2004–2005 growing season, an above‐average rainfall year. Because most measured variables responded strongly to soil water availability, all significant effects of soil water content were used as covariates to remove potential confounding effects of water availability on microbial responses to experimental treatment effects of cover type, CO₂, and sampling date. Microbial C and N activities were lower in interspace soils compared with soils under Larrea, and responses to date and CO₂ treatments were cover specific. Over the growing season, EEAs involved in cellulose (cellobiohydrolase) and orthophosphate (alkaline phosphatase) degradation decreased under ambient CO₂, but increased under elevated CO₂. Microbial C use and substrate use diversity in CLPPs decreased over time, and elevated CO₂ positively affected both. Elevated CO₂ also altered microbial C use patterns, suggesting changes in the quantity and/or quality of soil C inputs. In contrast, microbial biomass N was higher in interspace soils than soils under Larrea, and was lower in soils exposed to elevated CO₂. Gross rates of NH₄⁺ transformations increased over the growing season, and late‐season NH₄⁺ fluxes were negatively affected by elevated CO₂. Gross NO₃⁻ fluxes decreased over time, with early season interspace soils positively affected by elevated CO₂. General increases in microbial activities under elevated CO₂ are likely attributable to greater microbial biomass in interspace soils, and to increased microbial turnover rates and/or metabolic levels rather than pool size in soils under Larrea. Because soil water content and plant cover type dominates microbial C and N responses to CO₂, the ability of desert landscapes to mitigate or intensify the impacts of global change will ultimately depend on how changes in precipitation and increasing atmospheric CO₂ shift the spatial distribution of Mojave Desert plant communities.     

Globally significant changes in biological processes of the Amazon Basin: results of the Large-scale Biosphere–Atmosphere Experiment

The Amazon River, its huge basin, and the changes in biological processes that are rapidly occurring in this region are unquestionably of global significance. Hence, Global Change Biology is delighted to host a special thematic issue devoted to the Large‐scale Biosphere–Atmosphere Experiment in Amazônia (LBA), which is a multinational, interdisciplinary research program led by Brazil. The goal of LBA is no less modest than its subject: to understand how Amazônia functions as a regional entity in the Earth system and how these functions are changing as a result of ongoing changes in land use. This compilation of 26 papers resulting from LBA‐related research covers a broad range of topics: forest stocks of carbon (C) and nitrogen (N); fluxes of greenhouse gases and volatile organic compounds from vegetation, soils and wetlands; mapping and modeling land‐use change, fire risk, and soil properties; measuring changes caused by logging, pasturing and cultivating; and new research approaches in meteorology to estimate nocturnal fluxes of C from forests and pastures. Some important new synthesis can be derived from these and other studies. The aboveground biomass of intact Amazonian forests appears to be a sink for atmospheric carbon dioxide (CO₂), while the wetlands and soils are a net source of atmospheric methane (CH₄) and nitrous oxide (N₂O), respectively. Land‐use change has, so far, had only a minor effect on basin‐wide emissions of CH₄ and N₂O, but the net effect of deforestation and reforestation appears to be a significant net release of CO₂ to the atmosphere. The sum of the 100‐year global warming potentials (GWP) of these annual sources and sinks of CH₄, N₂O, and CO₂ indicate that the Amazonian forest–river system currently may be nearly balanced in terms of the net GWP of these biogenic atmospheric gases. Of course, large uncertainties remain for these estimates, but the papers published here demonstrate tremendous progress, and also large remaining hurdles, in narrowing these uncertainties in our understanding of how Amazônia functions as a regional entity in the Earth system.