Metal-metal communication in diruthenium complexes of the bridging ligand bis(imidazo[4,5-f][1,10]phenanthroline)

A series of diruthenium complexes incorporating bis(imidazo[4,5-f][1,10]phenanthroline) bridging structures were synthesized and their electrochemical properties were investigated. Upon changing the ancillary ligands of one diruthenium complex from 2,2′-bipyridine (bpy) to 1,10-phenanthroline (phen), electrochemical experiments revealed behavior that suggested through-bridge, metal-to-metal communication. By changing the inductive properties of the bridging ligand, the degree of communication could be controlled. The results point toward a hole-type superexchange electron transport mechanism.     

Effects of altered gravity on the actin and microtubule cytoskeleton of human SH-SY5Y neuroblastoma cells

Summary. Human SH-SY5Y neuroblastoma cells were used to study the effects of altered gravity on the actin and microtubule cytoskeleton dynamics. A cholinergic stimulation of the cells during a 6 min period of changing gravity (3 parabolas) resulted in an enhanced actin-driven protrusion of evoked lamellipodia. Likewise, the spontaneous protrusive activity of nonactivated cells was promoted during exposure to changing gravity (6 up to 31 parabolas). Ground-based experiments revealed a similar enhancement of the spontaneous and evoked lamellar protrusive activity when the cells were kept at 2 g hypergravity for at least 6 min. This gravity response was independent of the direction of the acceleration vector in respect to the cells. Exposure of the cells to “simulated weightlessness” (clinorotation) had no obvious influence on this type of lamellar actin cytoskeleton dynamics. A 20 min exposure of the cells to simulated weightlessness or to changing gravity (6 to 31 parabolas) – but not to 2 g (hypergravity, centrifugation) – resulted in an altered arrangement of microtubules indicated by bending, turning, and loop formation. A similar altered arrangement was shown by microtubules which had polymerized into lamellipodia after release from a taxol block at simulated weightlessness (clinorotation) or during changing gravity (5 parabolas). Our data suggest that in human SH-SY5Y neuroblastoma cells, microgravity affects the dynamics and spatial arrangement of microtubules but has no influence on the Rac-controlled lamellar actin cytoskeleton dynamics and cell spreading. The latter, however, seems to be promoted at hypergravity. Correspondence and reprints: Cell and Developmental Neurobiology, Institute of Zoology, University of Hohenheim, Garbenstrasse 30, 70593 Stuttgart, Federal Republic of Germany.     

Influence of intrapatch experiences and temperature on the time allocation of the whitefly parasitoidEncarsia formosa (Hymenoptera: Aphelinidae)

The effect of experiences, such as contact with honeydew, rejections of hosts, and ovipositions in hosts, and of temperature on the time allocation of individualEncarsia formosa female parasitoids on tomato leaflets have been studied. Behavioral records were analyzed by means of the proportional hazards model. Analyses were carried out at two levels: (1) the tendency of leaving and (2) the tendency of changing from one leaf side to another. The patch-leaving behavior ofE. formosa can be described by a stochastic threshold mechanism, which is characterized by a certain tendency (probability per time) to leave. The median time from being placed on the leaflet or, if it occurred, from the latest encounter with a host until leaving was 18.6 min. The median time for changing from one leaf side to the other was initially 11.6 min and dropped to 5.7 min after both leaf sides had been visited. The effect of temperature, ranging from 20 to 30°C, was negligible. The presence of honeydew as well as the first oviposition in an unparasitized host decreased the tendency to leave, thus increasing the giving up time (GUT) since the latest encounter with a host. Encounters with parasitized hosts did not affect the GUT since latest encounter; as a result, the total residence time increased. After the first oviposition in an unparasitized host the tendency of changing from the lower leaf side on which hosts were present to the upper side was decreased. The presence of honeydew did not affect the tendency of changing leaf sides.     

The cost of changing from one activity to another

When there is a cost of changing from one activity to another it affects the temporal organization of behaviour. It is shown theoretically that the cost of changing should be allocated by an animal to the cost of the behaviour that is about to be performed. This hypothesis is confirmed for the Barbary dove (Streptopelia risoria) changing between feeding and drinking in an experimental room. The double interruption method is used to determine the position of dominance boundaries in food and water deficit space. Boundary rotation is used to determine how a cost of changing affects motivational state and therefore how the cost is allocated. Results obtained in the room experiments are shown to be comparable to results obtained in Skinner boxes in which the double interruption and dominance boundary methods have been previously used, supporting their validity.     

Effect of Fixed Daylengths on the Photoperiodic Regulation of Gametogenesis in the Sea Urchin Strongylocentrotus purpuratus

Summary

The gametogenic response of the sea urchin Strongylocentrotus purpuratus was compared under treatments of different photoperiod regimes of fixed and seasonal changing daylength. Quantification of gametogenic activity in en- zymatically dissagregated ovaries and in histological sections of testes have shown that the sea urchin is sensitive to both fixed and variable daylengths. After one year at fixed short day (8L:16D) or fixed neutral day (12L:12D) the gonads were ripe and in active gametogenesis, the same as were gonads of animals reared at changing photoperiod and sampled during the short-day phase of the cycle. Under fixed long day (16L:8D) the gonads lacked significant amount of gametes and had the cell constitution found in gonads of animals reared at changing photoperiod and sampled during the long-day phase of the cycle. Measurement of a critical daylength related to the autumnal equinox seems to be part of the mechanism in the photoperiodic regulation of vitellogenic oocyte growth and spermatogenesis in these animals.     

Evaluation of isolation methods and culture conditions for rat bone marrow mesenchymal stem cells

Bone marrow mesenchymal stem cells (bMSCs) are multipotent and preferred for cell therapy. However, the content of bMSCs is very low. To propagate a large number of primary bMSCs rapidly has become a prerequisite for bMSC study and application. Different methods of isolating and culturing bMSC were used and compared among groups: bMSCs of group A are isolated using direct adherence method and cultured by conventional medium changing; of group B are isolated using direct adherence method and cultured by low volume medium changing; of group C are isolated using density gradient centrifugation and cultured by conventional medium changing; of group D are isolated using density gradient centrifugation and cultured by low volume medium changing. The average population doubling time (PDT), average generation time and the cumulative cell doubling level were calculated for every group. bMSCs cultured with complete medium containing 10, 11 and 15 % FBS were allocated into group a, b and c separatedly. Cell numbers were counted everyday under a microscope, the population doubling level curve was plotted and PDT was calculated. The growth curve of bMSC in group a, b and c was made. Both density gradient centrifugation and direct adherence methods obtained relatively pure bMSCs. A larger quantity of primary bMSCs were obtained by direct adherence. bMSC proliferation was faster when cultured via the low volume medium changing method at a serum concentration of 11 % than the other methods. Isolating bMSC by direct adherence and culturing by low volume medium changing at a serum concentration of 11 % is preferential for bMSC propagation.     

Larger trees may support larger Indiana bat maternity colonies in a dynamic landscape

Indiana bats (Myotis sodalis), federally listed as endangered, are of management concern in eastern North America. While researchers quantified the habitat affinities of the species throughout the range, few studies have occurred in regions where populations are at high risk for wind energy development and changing climes. Central Illinois, USA, is a dynamic landscape where forest area has been increasing in recent decades (on public and private land) because of changing farming practices and increased habitat protections. The increasing availability of large diameter trees, increasing forest biomass, and changing forest compositions have the potential to influence Indiana bat roost habitat preferences. We assessed Indiana bat maternity roost selection at the tree and forest plot scale to characterize patterns of use in this region from 2017–2018. We predicted that large trees on the landscape would support large colonies of Indiana bats. We located bats in multiple species of trees including elm (Ulmus spp.), cottonwood (Populus deltoides), and shagbark hickory (Carya ovata). We documented larger maternity colonies sharing roosts than in previous studies from the 1980s in the same region. We suggest managers and regulatory agencies monitor Indiana bats in dynamic landscapes such as those with changing forest composition and biomass.     

A comparison of methods to partition selection acting via components of fitness: Do larger male bullfrogs have greater hatching success?

We contrast three methods for measuring selection at sequential fitness components (here called the additive, changing variance, and independent methods). The independent method (Koenig and Albano, 1987; Conner, 1988) describes the relationship between a phenotypic character and one fitness component independent of other components. This method is appropriate when the question is whether or not a character has fitness consequences independent of selection at other stages. The additive (Arnold and Wade, 1984a) and changing variance (Kalisz, 1986; Koenig and Albano, 1987) methods measure selection via one component of fitness, taking into consideration constraints imposed by selection via earlier components in the sequence. These methods therefore more accurately track selection over a sequence of fitness components. Of these latter two methods, the changing variance method yields erratic results in simulation studies and is not recommended in its unmodified form. The additive method (equivalent to the changing variance method weighted as described in Wade and Kalisz [1989]) explicitly partitions selection into additive components and is useful for measuring selection taking into account the constraints imposed by selection acting via prior fitness components. The methods often yield very different estimates of the relative degree to which the mean of a character is changed by selection acting via a particular component of fitness (the “strength” of selection). However, neither the additive nor independent method is inherently superior to the other; rather, these measures are complementary.     

Improving the acidic stability of a methyl parathion hydrolase by changing basic residues to acidic residues

The acidic stability of a methyl parathion hydrolase (Ochr-MPH) was improved by selectively changing basic amino acids to acidic ones. Mutation sites were selected based on the position-specific amino acid replacement probabilities (more than or equal to 0.2) and the entropy of each site (more than or equal to 0.8). Three mutants (K208E, K277D, and K208E/K277D) were more stable than the wild-type (WT). Their half-lives at pH 5.0 were 64, 68, 65 min, respectively, whereas that of WT was 39 min. The acidic stability of proteins may therefore be improved by changing selected basic amino acid residues to acidic ones.     

The metabolic cost of changing walking speeds is significant,implies lower optimal speeds for shorter distances,and increases daily energy estimates

Humans do not generally walk at constant speed, except perhaps on a treadmill. Normal walking involves starting, stopping and changing speeds, in addition to roughly steady locomotion. Here, we measure the metabolic energy cost of walking when changing speed. Subjects (healthy adults) walked with oscillating speeds on a constant-speed treadmill, alternating between walking slower and faster than the treadmill belt, moving back and forth in the laboratory frame. The metabolic rate for oscillating-speed walking was significantly higher than that for constant-speed walking (6–20% cost increase for ±0.13–0.27 m s⁻¹ speed fluctuations). The metabolic rate increase was correlated with two models: a model based on kinetic energy fluctuations and an inverted pendulum walking model, optimized for oscillating-speed constraints. The cost of changing speeds may have behavioural implications: we predicted that the energy-optimal walking speed is lower for shorter distances. We measured preferred human walking speeds for different walking distances and found people preferred lower walking speeds for shorter distances as predicted. Further, analysing published daily walking-bout distributions, we estimate that the cost of changing speeds is 4–8% of daily walking energy budget.     

Cycle changing the medium results in increased nisin productivity per cell in <Emphasis Type="Italic">Lactococcus lactis</Emphasis>

High specific cellular nisin production was aimed by cycle changing the medium of Lactococcus lactis N8 and LAC48. The highest level of nisin production was reached with the 120 min cycles but maximal production was unstable. In shorter cycles (30 and 60 min) cells could be maintained in a high production state up to the end of the fermentation (28 and 14 cycles). N8 produced 19-fold and LAC48 15-fold more nisin with cycle changing the medium than without cycle incubation.     

Strategies for the Production of Recombinant Protein in Escherichia coli

In the recent past years, a large number of proteins have been expressed in Escherichia coli with high productivity due to rapid development of genetic engineering technologies. There are many hosts used for the production of recombinant protein but the preferred choice is E. coli due to its easier culture, short life cycle, well-known genetics, and easy genetic manipulation. We often face a problem in the expression of foreign genes in E. coli. Soluble recombinant protein is a prerequisite for structural, functional and biochemical studies of a protein. Researchers often face problems producing soluble recombinant proteins for over-expression, mainly the expression and solubility of heterologous proteins. There is no universal strategy to solve these problems but there are a few methods that can improve the level of expression, non-expression, or less expression of the gene of interest in E. coli. This review addresses these issues properly. Five levels of strategies can be used to increase the expression and solubility of over-expressed protein; (1) changing the vector, (2) changing the host, (3) changing the culture parameters of the recombinant host strain, (4) co-expression of other genes and (5) changing the gene sequences, which may help increase expression and the proper folding of desired protein. Here we present the resources available for the expression of a gene in E. coli to get a substantial amount of good quality recombinant protein. The resources include different strains of E. coli, different E. coli expression vectors, different physical and chemical agents and the co expression of chaperone interacting proteins. Perhaps it would be the solutions to such problems that will finally lead to the maturity of the application of recombinant proteins. The proposed solutions to such problems will finally lead to the maturity of the application of recombinant proteins.     

Age-related changes in hematocrit in the Galápagos sea lion (Zalophus wollebaeki) and the Weddell seal (Leptonychotes weddellii)

In mammals, hematocrit (Hct) is optimized between the divergent requirements of blood flow characteristics and oxygen transport and storage capacity. This trade‐off plays a particularly major role in marine mammals, in which oxygen demand during sustained diving requires high Hct levels. Galápagos sea lions (Zalophus wollebaeki) need a long time after birth to develop from terrestrial life to the state of an independent forager at sea. We here show that pups were born with high Hct of 45%, then reduced Hct during the first 40 d of life to 31% while they remain constantly ashore, and increased Hct again until the adult level (57%) is reached at 1 yr of age when they begin to dive for foraging at sea. A similar, but much more rapidly changing pattern is seen in Weddell seal pups, but not in northern elephant seals, where no reduction in Hct is seen after birth. These and similarly changing patterns in terrestrial mammals likely reflect species specific functional adjustments during development due to a trade‐off between the costs of circulation and the changing need to store and transport oxygen.     

Culture conditions induce the appearance of immortalized C3H mouse cell lines

Mouse fibroblasts were cultured by three different procedures: (a) changing the 0.2 ml/cm2 of growth medium every 2nd d and seeding 1 X 10(5) cells/cm2 after confluency; (b) changing the 0.4 ml/cm2 of growth medium only at subculture performed at confluency by a 1:2 split and keeping the bottles incubated on a rocking platform; (c) the same as Method b but keeping the bottles stationary throughout culture. By Method a no lines were immortalized over 36 experiments whereas Method b gave 1/4 immortalized lines and Method c gave 10:12 immortalized lines. Cells always went into crisis at the 9th to 11th doubling. Immortalized lines had a tetraploid DNA content.     

Sex-ratio evolution in sex changing animals

Sex allocation theory is often able to make clear predictions about when individuals should facultatively adjust their offspring sex ratio (proportion male) in response to local conditions, but not the consequences for the overall population sex ratio. A notable exception to this is in sex changing organisms, where theory predicts that: (1) organisms should have a sex ratio biased toward the "first" sex: (2) the bias should be less extreme in partially sex changing organisms, where a proportion of the "second" sex matures directly from the juvenile stage; and (3) the sex ratio should be more biased in protogynous (female first) than in protandrous (male first) species. We tested these predictions with a comparative study using data from 121 sex changing animal species spanning five phyla, covering fish, arthropods, echinoderms, molluscs, and annelid worms. We found support for the first and third predictions across all species. The second prediction was supported within the protogynous species (mainly fish), but not the protandrous species (mainly invertebrates).     

Acclimation of photosynthesis and pigments to seasonally changing light conditions in the endemic Antarctic red macroalga Palmaria decipiens

The influence of seasonally fluctuating Antarctic daylengths on the photosynthetic apparatus of Palmaria decipiens was studied in culture experiments. Maximal photosynthetic activity (ETRmax) and maximal quantum yield (Fv/Fm), measured by in vivo chlorophyll fluorescence, and concentrations of pigments (phycobiliproteins and Chl a) were determined monthly. Fv/Fm remained constantly high between 0.62 and 0.67 during mid-autumn, winter and spring. ETRmax and pigment contents increased continuously in mid-autumn and winter and were highest in spring. A positive correlation between pigments and ETRmax was found. In summer, ETRmax, Fv/Fm and pigment levels decreased to their lowest values. P. decipiens acclimated by increasing phycobilisome (PBS) number and changing PBS structure, probably changing rod length and rod number. The data show that P. decipiens is efficiently adapted to the short period of favourable light conditions in the field. A photoperiodic control of pigment synthesis triggered by daylength is suggested.     

A photometric method to analyze induced erythrocyte shape changes

In this paper, a photometric method was introduced to quantify biochemically-induced red blood cell (RBC) shape changes when no shear force was acting on the cells. To obtain the photometric RBC shape parameter (RF1), a monolayer of point-attached RBCs was prepared on the floor of a flat flow chamber and the transmission of light perpendicular to the monolayer plane was measured: 1) in phosphate buffered saline with 0.1% bovine serum albumin (PBS₊) and 2) in PBS₊, containing a shape changing compound (in both, the RBCs were not deformed due to shear flow). To normalize the data, a third transmission value at a shear stress of 3 Pa was measured in PBS₊ from the same RBC monolayer. To validate the photometric data, RF1 of RBCs exposed to shape changing agents was correlated by linear regression analysis with 1) data obtained with the tangent-counting technique (TC) and 2) the morphological index (MI). The coefficient of correlation was calculated at 0.95 for the TC data and 0.94 for the MI data, respectively. The sensitivity of the photometric method was tested with stomatocytogenic chlorpromazine (CP) and echinocytogenic sodium salicylate (SA). CP (2.5 μM) induced a significant decrease of RF1 to −0.045 (N = 6 donors, p < 0.01), whereas SA (2.5 mM) increased RF1 to +0.027 significantly (N = 6, donors, p < 0.01). Both the CP-induced and the SA-induced shape changes appeared less than 2 min after application of the shape changing agents, and changed gradually within another 30 min when the agent was present in PBS₊, partly disappearing within about 2 min after reincubation of the shape transformed RBCs in PBS₊ not containing the agent.     

Targeted cross-linking-mass spectrometry determines vicinal interactomes within heterogeneous RNP complexes

Proteomic and RNomic approaches have identified many components of different ribonucleoprotein particles (RNPs), yet still little is known about the organization and protein proximities within these heterogeneous and highly dynamic complexes. Here we describe a targeted cross-linking approach, which combines cross-linking from a known anchor site with affinity purification and mass spectrometry (MS) to identify the changing vicinity interactomes along RNP maturation pathways. Our method confines the reaction radius of a heterobifunctional cross-linker to a specific interaction surface, increasing the probability to capture low abundance conformations and transient vicinal interactors too infrequent for identification by traditional cross-linking-MS approaches, and determine protein proximities within RNPs. Applying the method to two conserved RNA-associated complexes in Saccharomyces cerevisae, the mRNA export receptor Mex67:Mtr2 and the pre-ribosomal Nop7 subcomplex, we identified dynamic vicinal interactomes within those complexes and along their changing pathway milieu. Our results therefore show that this method provides a new tool to study the changing spatial organization of heterogeneous dynamic RNP complexes.