Counterintuitive migration patterns by Atlantic salmon Salmo salar smolts in a large lake

What little is known about the seaward migration of Salmo salar smolt migration through standing waters indicates that it is both slow and results in high mortality rates, compared with riverine migration. This may be partly because smolts in lakes need to swim more actively and require more complex directional cues than they do in rivers. In this telemetry study of smolt migration through Loch Lomond, S. salar smolts made repeated movements in directions away from the outflowing river, which considerably increased migration time.     

Rhythmic aspects of estuarine migration of hatchery-reared Atlantic salmon (Salmo salar) smolts

Seasonal, diel and tidal rhythmic activity of hatchery-reared Atlantic salmon ( Salmo salar ) smolts migrating through a large estuary was studied by ultrasonic tracking of 46 individuals during two seasons. Prior to 10 May each year most smolts were inactive and remained near shore in shallow water. After 10 May nearly all smolts moved away from the release point into swift water and made rapid seaward progress. Initiation of migration each year occurred when river and hatchery water temperatures rose above 9°C. Migration in the estuary was largely passive drift, and as a result there were distinct tidal rhythms of ground ('swimming') speed and net seaward travel. There were no diel rhythms in ground speed or net seaward travel; smolts drifted seaward on the tides during both day and night. Smolts may be slightly deeper during day than night.     

Interaction between migration behaviour and estuarine mortality in cultivated Atlantic salmon Salmo salar smolts

Migration behaviour and estuarine mortality of cultivated Atlantic salmon Salmo salar smolts in a 16 km long estuary were studied using two methods: (1) acoustic telemetry and (2) group tagging in combination with trap nets. Progression rates of surviving individuals through the estuary were relatively slow using both methods [0·38 L_T (total length) s^?1 v. 0·25 L_T s^?1]. In 2012, the progression rate was slow from the river to the estuary (0·55 L_T s^?1) and the first part of the estuary (0·31 L_T s^?1), but increased thereafter (1·45–2·21 L_T s^?1). In 2013, the progression rate was fast from the river to the estuary (4·31 L_T s^?1) but was slower thereafter (0·18–0·91 L_T s^?1). Survival to the fjord was higher in 2012 (47%) compared to 2013 (6%). Fast moving individuals were more likely to migrate successfully through the estuary compared to slower moving individuals. Adult recapture of coded‐wire‐tagged S. salar was generally low (0·00–0·04%). Mortality hot spots were related to topographically distinct areas such as the river outlet (in 2012) or the sill separating the estuary and the fjord (in 2013). At the sill, an aggregation of cod Gadus morhua predating on cultivated smolts was identified. The results indicate that slow progression rates through the estuary decreases the likelihood of smolts being detected outside the estuary. The highly stochastic and site‐specific mortality patterns observed in this study highlight the complexity in extrapolating mortality patterns of single release groups to the entire smolt run of wild S. salar.     

Estuarine survival and migratory behaviour of Atlantic salmon Salmo salar smolts

To estimate mortality rates, assess the spatio‐temporal dynamics of natural mortality and examine migratory behaviour during the fresh to saltwater transition, 185 wild Atlantic salmon Salmo salar smolts were implanted with coded acoustic transmitters. Seaward migration of tagged S. salar from four river systems in an area of Nova Scotia, Canada known as the Southern Upland was monitored using fixed receivers and active telemetry over 3 years. Cumulative survival through the river, inner estuary, outer estuary and bay habitats averaged 59·6% (range = 39·4–73·5%). When standardized to distance travelled, survival rates followed two patterns: (1) constant rates of survival independent of habitat or (2) low survival most frequently associated with inner estuary habitats. In rivers where survival was independent of habitat, residency periods were also independent of habitat, post‐smolts exhibited few upstream movements, took a more direct route to the ocean and reached the ocean rapidly. Alternatively, in rivers where survival was habitat specific, residency was also habitat specific with overall increased residency, more frequent upstream movements and delayed arrival to the open ocean. The sudden disappearance of most (75–100%) smolts and post‐smolts assumed dead during the course of this study warrants further examination into the role of avian predators as a mortality vector.     

Diet,feeding patterns,and prey selection of subyearling Atlantic salmon (Salmo salar) and subyearling chinook salmon (Oncorhynchus tshawytscha) in a tributary of Lake Ontario

Since juvenile Atlantic salmon (Salmo salar) and Chinook salmon (Oncorhynchus tshawytscha) occupy a similar habitat in Lake Ontario tributaries, we sought to determine the degree of diet similarity between these species in order to assess the potential for interspecific competition. Atlantic salmon, an historically important but currently extirpated component of the Lake Ontario fish community, are the focus of a bi‐national restoration effort. Presently this effort includes the release of hatchery produced juvenile Atlantic salmon in Lake Ontario tributaries. These same tributaries support substantial numbers of naturally reproduced juvenile Pacific salmonids including Chinook salmon. Subyearling Atlantic salmon and subyearling Chinook salmon had significantly different diets during each of the three time periods examined. Atlantic salmon fed slightly more from the benthos than from the drift and consumed mainly chirononmids (47.0%) and ephemeropterans (21.1%). The diet of subyearling Chinook salmon was more closely associated with the drift and consisted mainly of chironomids (60.2%) and terrestrial invertebrates (16.0%). Low diet similarity between subyearling Atlantic salmon and subyearling Chinook salmon likely minimizes competitive interactions for food between these species in Lake Ontario tributaries. However, the availability of small prey such as chironomids which comprise over 50% of the diet of each species, soon after emergence, could constitute a short term resource limitation. To our knowledge this is the first study of interspecific diet associations between these two important salmonid species.     

Use of radio telemetry for studying upriver migration of adult Atlantic salmon (Salmo salar)

This paper describes and evaluates a 50 mHz radio telemetry system for studying river movements of adult Atlantic salmon ( Salmo salar ). In fresh water for most applications radio telemetry is preferable to ultrasonic telemetry, because the receiving element (antenna) can be above water, and radio signals are scarcely affected by turbulent, weedy or ice-covered water. Within the range of 10–200 mHz higher frequencies are preferred, since the efficient antenna size is inversely proportional to frequency, and attenuation of signals is independent of frequency. Transmitters were cylindrical (6.5–9.6 cm long * 1.9 cm diam) with a 0.5 wavelength antenna trailing from one end. Each emitted pulsed signals on one of 20 crystal-controlled channels between 49.100 and 49.385 mHz. Transmitters were placed in the stomachs of salmon and the antenna trailed out the last gill slit. Receivers were portable 20-channel manual or automatic scan models, and antennas were 48 cm diam capacitor tuned loops. Some salmon regurgitated transmitters. Two salmon were recaptured and showed no ill effects from carrying transmitters for 32 and 42 days. Pulse rate had little effect on known transmitter life under natural conditions. Known tag life was variable, but averaged 70 days for transmitters with 1000 mah batteries. The range of transmission of transmitters to a receiving system in an airplane at 410 m altitude was about 10 km, and to a boat about 1 km. Range to a land vehicle was variable depending on obstructions. From the airplane transmitters can be located within a radius of about 50 m.     

Residency time, migration route and survival of Atlantic salmon Salmo salar smolts in a Canadian fjord

Atlantic salmon Salmo salar smolts (n = 181) from two rivers were surgically implanted with acoustic transmitters and released to determine migration route, residency time and survival in a 50 km long estuarine fjord located on the south coast of Newfoundland, Canada. Data obtained from automated receivers placed throughout the Bay d'Espoir fjord indicated that migrating smolts used different routes to reach the outer areas of the fjord. The duration of time that smolts spent in the immediate estuary zone also differed between the two localities (7 and 17 days) although the total time smolts were resident in the fjord was similar and extensive (40 days). Many smolts were resident for periods of 4-8 weeks moving back and forth in the outer part of the fjord where maximum water depths range from 300 to 700 m. Survival in the estuary zone was greater for smolts with prolonged residency in estuarine habitat. Overall smolt survival to the fjord exit was moderately high (54-85%), indicating that the initial phase of migration did not coincide with a period of unusually high mortality.     

Riverine movements of hatchery-reared Atlantic salmon (Salmo salar) upon return as adults

Synopsis Hatchery-reared Atlantic salmon returning as adults to Maine's Penobscot River drainage basin were tagged with radio transmitters to permit long-term observation of their movements. Locations of salmon carrying small stomachemplaced transmitters were periodically determined primarily from an airplane; canoes and road vehicles were also used. Objectives were to determine the patterns, routes and rates of salmon movement; to assess the effect of dams on the migration; and to compare the behavior of salmon that had been imprinted as smolts to headwaters with that of salmon released as smolts near the head of tide. No consistent pattern of salmon movement emerged. Movement was erratic with wandering both up and downstream interspersed with position holding. A weak seasonal aspect to the movement was detected, with the minimum numbers moving in early September and the rates and distances of movement decreasing as the season progressed. Salmon often remained at various locations in the rivers for periods of time before subsequently moving. Salmon were also apparently impeded by dams, as on numerous occasions they were observed to approach a dam, then move back downstream. Some differences in behavior were found between the salmon imprinted as smolts to headwaters and those released as smolts at head of tide. Several imprinted salmon homed to a particular tributary when unimpeded by dams or homed by surmounting a dam, and several moved up to the base of the dam. Few unimprinted salmon moved up that tributary. The variable behavior and lack of strong upstream movement may be due to the salmon's lack of genome adapted to the Penobscot River drainage, the scarcity of conspecifics with their possible pheromonal influence, and the lack of a home stream and concomitant motivation to stimulate unimprinted salmon to progress upstream.     

Migration and survival of Atlantic salmon Salmo salar smolts in a large natural lake

An investigation with acoustic telemetry of the passage of Salmo salar smolts through a large natural lake found heavy mortality occurred at the river‐to‐lake confluences (mean 31.2% km^?1), but was lower in the main body of the lake (mean 2.4% km^?1). Predation was a significant pressure on emigrating smolts as tagged pike Esox lucius aggregated at river‐to‐lake confluences during the peak of the smolt run. Tagged smolts mainly emmigrated into the lake in the late evening after dusk, possibly as a predator‐avoidance behaviour.     

Post-stocking movement and survival of hatchery-reared bloater (Coregonus hoyi) reintroduced to Lake Ontario

1. Determining the movement and fate of fishes post-stocking is challenging due to the difficulty in monitoring them, particularly immediately after release. Bloater (Coregonus hoyi; Salmonidae) is a deepwater cisco that has been extirpated from Lake Ontario for several decades and is presently the focus of binational restoration stocking efforts; however, there is limited information to evaluate the efficacy of these efforts. The aim of this study was to examine the initial post-release survival, 3D movement, and behaviour of hatchery-reared bloater stocked in Lake Ontario to expand knowledge of post-stocking ecology of fish and inform stocking practices for deepwater ciscoes.
2. In total, 74 hatchery-reared bloater were tagged with acoustic transmitters with depth and temperature sensors in 2016, 2017, and 2018 and passively monitored on an array of 105 69-kHz acoustic receivers deployed in north-eastern Lake Ontario. Several spatial metrics analysed movements after release to investigate immediate post-stocking survival and behaviour for the first time in a pelagic freshwater forage fish.
3. Estimated survival for tagged bloater was low (≤42%) and detection periods of live bloater ranged from 0.2 to 12.1 days (mean ± SD: 2.9 ± 2.9 days). Following release, tagged bloater dispersed quickly and exhibited an association with deeper water (>40 m). Despite overlap in space use for some bloater, there was no evidence of schooling behaviour. Bloater underwent extensive diel vertical migration from near bottom to within metres of the surface. These results demonstrated that, despite high initial mortality, some hatchery-reared bloater survived the initial stress of release and displayed characteristic behaviour of the species.
4. This study demonstrated the value of acoustic telemetry in restoration efforts and revealed survival and behaviour of bloater that has never been observed at this resolution, providing novel information for the management of reintroduced species. Establishment of a self-sustaining population of bloater will help restore fish native to Lake Ontario thus increasing prey fish diversity, improving ecological integrity and resilience, and serving as a model for the reintroduction and management of other native species throughout the Great Lakes.

     

Physiological preparedness and performance of Atlantic salmon Salmo salar smolts in relation to behavioural salinity preferences and thresholds

This study investigated the relationships between behavioural responses of Atlantic salmon Salmo salar smolts to saltwater (SW) exposure and physiological characteristics of smolts in laboratory experiments. It concurrently described the behaviour of acoustically tagged smolts with respect to SW and tidal cycles during estuary migration. Salmo salar smolts increased their use of SW relative to fresh water (FW) from April to June in laboratory experiments. Mean preference for SW never exceeded 50% of time in any group. Preference for SW increased throughout the course of smolt development. Maximum continuous time spent in SW was positively related to gill Na⁺, K⁺‐ATPase (NKA) activity and osmoregulatory performance in full‐strength SW (measured as change in gill NKA activity and plasma osmolality). Smolts decreased depth upon reaching areas of the Penobscot Estuary where SW was present, and all fish became more surface oriented during passage from head of tide to the ocean. Acoustically tagged, migrating smolts with low gill NKA activity moved faster in FW reaches of the estuary than those with higher gill NKA activity. There was no difference in movement rate through SW reaches of the estuary based on gill NKA activity. Migrating fish moved with tidal flow during the passage of the lower estuary based on the observed patterns in both vertical and horizontal movements. The results indicate that smolts select low‐salinity water during estuary migration and use tidal currents to minimize energetic investment in seaward migration. Seasonal changes in osmoregulatory ability highlight the importance of the timing of stocking and estuary arrival.     

Use of telemetry and hydraulic modeling to evaluate and improve fish guidance efficiency at a louver and bypass system for downstream-migrating Atlantic salmon (Salmo salar) smolts and kelts

A fish protection system has been installed in a power canal at a hydroelectric facility on the Exploits River, Grand Falls-Windsor, Newfoundland, Canada. The river has an anadromous Atlantic salmon (Salmo salar)population in the order of 30000 returning adults. A louver and bypass were installed to protect downstream migrating smolt and kelt from entering the penstocks and turbines in the power canal at the generating facility. The efficiency and effectiveness of this protection system has been evaluated since 1997 through a combination of conventional telemetry, use of a digital spectrum processing (DSP) telemetry system with multiple antennae array, floy tagging, and velocity profiling along the louver array and throughout the canal. Initial monitoring in 1997 using conventional telemetry indicated low fish guidance efficiencies (FGEs) in the area of 25% for smolt. In 1998, a DSP telemetry system was installed along the louver array to attempt to identify problem areas where fish were passing through or under the louver. This work also recorded low smolt FGEs in 1998 (24.3%). However, the DSP system did identify sites along the louver array where fish were being lost, and hydraulic measurements suggested fish loss was related to hydraulic turbulence and irregularities in the guidance velocities. In 1999, a scale model of the power canal and bypass system was constructed at the University of Waterloo Engineering Department's Hydraulic Laboratory and a number of structural and operational changes to the system were evaluated. Based on the results of laboratory hydraulic modeling and DSP telemetry, a number of changes were made to the louver and bypass, prior to operation in 1999 and 2000. Monitoring of smolt out migration in 1999 and 2000 indicated a substantial improvement in smolt FGEs to 54.0 and 65.3%, respectively, and the DSP system identified areas where further improvements could be made. This paper demonstrates the utility of a sophisticated telemetry system in the evaluation of fish protection systems and how the technology can be applied towards the optimization of the effectiveness of fish by-passes.     

Thyroid hormone levels in Atlantic salmon (Salmo salar) during the return migration from the ocean to spawn

Serum thyroid hormone levels were determined in adult Atlantic salmon ( Salmo salar ) of both sexes caught in the ocean and at a sequence of locations on their return migration to spawn. Tri-iodothyronine (T₃) levels were greatest in fish caught in coastal or estuarine waters or in a river near head-of-tide. T₃ levels were lower in fish caught in rivers throughout the angling season and lowest in those captured entering a tributary near spawning. Thyroxine (T₄) levels were lowest in immature fish captured in the ocean in winter but raised in fish captured in spring; many of the latter group showed endocrine evidence of their becoming sexually mature. T₄ levels were greatest in fish captured in coastal waters and progressively lower in fish captured in an estuary, near head-of-tide and in rivers. T₄ levels in fish captured at tributary entry near spawning exceeded those in fish caught in rivers earlier in the year. In general, these data support the hypothesis that motor activity level in migrant fish is a determinant of thyroid status.     

Overwintering and migration behaviour of post-spawned Atlantic salmon Salmo salar in a large hydropower-regulated river and reservoir

Tracking 47 post-spawned adult Atlantic salmon Salmo salar L. in a hydropower-regulated river through autumn, winter and spring revealed that winter survival was 56% and 75% in two study years, respectively, with higher mortality of males than females (50% vs. 33% and 100% vs. 13%, respectively). Some kelts (n = 7) displayed nondirected movements that were interpreted as a reconditioning period for an average of 9–17 days prior to directed downstream movements indicating the initiation of migration. Survival after the initiation of migration in spring was 83% and 94% to the hydropower dam in the first and second study years, and decreased to 60 and 63%, respectively, after dam passage. There were no further losses in the downriver reach in the second year, with the first year having a cumulative survival estimate of 53% to the river mouth. Kelts approached the dam when the spillway gates were available as a passage option most of the time (64%–75%), but some kelts arrived at the dam or had not yet passed when spillways were closed (n = 6) and the only remaining passage option was restricted to the turbines. However, all but one kelt that must have passed via turbine were successful in reaching the river mouth. Migratory delay presumably due to searching behaviour caused by low water flow was estimated at approximately 6 days as migration rates were significantly slower in the reservoir (median ± s.e. 8.5 ± 2.5 km day⁻¹) than up- (29.7 ± 5.0 km day⁻¹) or downriver (22.1 ± 3.1 km day⁻¹). The proportion of time (median 30%) that kelts spent swimming upstream (searching behaviour) in the reservoir was a significant variable for migration success.     

Predation on hatchery-reared and wild smolts of Atlantic salmon, Salmo salar L., in the estuary of River Orkla, Norway

Predation on wild and hatchery-reared Atlantic salmon smolts was studied in the estuary of River Orkla. Cod and saithe congregating in the estuary were the most serious predators on smolts. There was no difference between the mortality rates of wild and hatchery-reared smolts. Predation by cod was estimated at 20%. No evidence was found to indicate selective predation on the smallest wild and hatchery-reared smolts.     

Physiological seawater adaptation in juvenile Atlantic salmon (Salmo salar) autumn migrants

Summary

• 1 About 25 % of juvenile Atlantic salmon (Salmo salar) migrating downstream in the River Frome in southern England do so in the autumn rather than in the spring. Here, we examine the physiological status of these fish with regard to those features that adapt them to sea water during the parr–smolt transformation (i.e. gill Na⁺K⁺ ATPase activity; the number, size and type of chloride cells on the gill lamellae; salinity tolerance and relative plasma thyroid levels).
• 2 Autumn migrants, and those fish which subsequently reside in the tidal reaches during the winter, are not sufficiently physiologically adapted to permit permanent or early, entry into the marine environment.
• 3 It is not known what proportion of autumn migrating fish survive and return to spawn as adults. If significant numbers do return, however, the production from tidal reach habitats must be taken into account in the development of salmon stock management strategies, especially monitoring and assessment programmes, and in the evaluation of factors affecting stocks.

     

Genetic assessment of Atlantic salmon Salmo salar and sea trout Salmo trutta stocking in a Baltic Sea river

Microsatellite DNA variation was used to assess the outcome of stocking Atlantic salmon Salmo salar and migratory trout Salmo trutta in River Sävarå, N Sweden. No information on pre‐stocking genetic composition of S. salar and S. trutta in River Sävarå was available. In 2 year‐classes of S. salar smolt, microsatellite data indicated that post‐stocking genetic composition differed markedly (F_ST= 0·048) from the main donor strain, Byskeälven S. salar, and from other Gulf of Bothnia S. salar stocks (F_ST 0·047 and 0·132). The STRUCTURE programme failed to detect any substructuring within Sävarå salmon. It was concluded that only minor introgression estimated to a proportion of 0·11 (95% CI 0·07–0·16) has occurred in S. salar. Salmo trutta showed overall low differentiation among populations with maximum F_ST of 0·03 making analysis more cumbersome than in S. salar. Still, the SävaråS. trutta deviated significantly from potential donor populations, and STRUCTURE software supported that majority of trout in Sävarå formed a distinct genetic population. Admixture was more extensive in S. trutta and estimated to 0·17 (95% CI 0·10–0·25).     

Migration of smolts of Atlantic salmon (Salmo salar L.) and sea trout (Salmo trutta L.) in a chalkstream

Synopsis Migration of smolts in the River Piddle, Dorset, was studied over three years in relation to factors that could influence downstream movement. The river originates mostly from groundwater springs, resulting in stable flows and low turbidity except in very rainy weither. Fish were intercepted at the tidal limit in a fixed trap-net, and measurements of water temperature, discharge, turbidity, barometric pressure, rainfall and solar radiation taken nearby. Slightly increased turbidity and discharge following heavy rain initiated major movements during two nights of the total of 55 days studied. At other times large-scale movements rock place during sunny warm afternoons. Both solar radiation and water temperature were correlated with intensity and timing of movement. The pattern of migration is different from that reported on other rivers, reflecting the relatively stable flow regime of the chalkstream.     

Analysis of parentage determination in Atlantic salmon (Salmo salar) using microsatellites

Microsatellite genetic markers are becoming increasing important tools in the investigation of alternate reproductive strategies in wild plants and animals, and in the implementation of optimal breeding programs for endangered species, and managed cultured populations. Overall, little attention is paid to the frequency and impact of scoring errors and mutations on the resolution and accuracy of such analyses. Here, parentage of 792 Atlantic salmon ( Salmo salar ) reared communally were determined using di- and tetranucleotide microsatellites. Over 99·5% of the offspring could be unambiguously matched to one set of parents in the original 12 (1 × 1) experimental cross (each of 12 males uniquely crossed to one of 12 females) and in a simulated 36 (1 × 1) cross (involving additional parents), and over 80% in a 12 × 12 cross (all 12 males crossed to all 12 females). Mutations were rare (≈3·4 × 10⁻⁻⁴), though scoring errors were relatively common (2–3% per allele scored), with the rate of error varying among loci. Approximately 90% of scoring errors (or mutations) are expected to be detected in this analysis, and of those that are not, fewer than 0·5% should lead to a false or incorrect determinations of parentage. Based on several indices, we expect that greater than 99·7% of offspring assayed were matched to their true parents.