The effects of water pollution on the phylogenetic community structure of aquatic plants in the East Tiaoxi River,China

1. Water pollution is one of the most serious aquatic environmental problems worldwide. In China, recent agricultural and industrial development has resulted in rapid changes in aquatic ecosystems. Here, we reveal the effects of water pollution on the phylogenetic community structure of aquatic macrophytes in the Tiaoxi River, China.
2. We placed a rectangular plot at 47 sites within the Tiaoxi River from the mouth of the river to 88.5 km upstream, in which we recorded species abundance and measured 22 physico-chemical variables. Bayesian phylogeny using the rbcL and matK gene sequences was employed to quantify phylogenetic α- and β-diversity, and test the phylogenetic signal in four growth forms: emergent, floating-leaved, free-floating, and submerged.
3. Within communities, water contamination and phytoplankton abundance decreased species richness and phylogenetic diversity, which resulted in phylogenetic clustering; species within communities were more closely related to each other than expected. Between communities, differences in geographical distance and phytoplankton abundance resulted in phylogenetic dissimilarity among plots. Aquatic macrophytes showed phylogenetic signals in which related species responded more similarly to disturbance.
4. Thus, the observed patterns could be explained by environmental filtering and suggested that water pollution by human activity has added more filters to the existing environmental filters that drive the species assembly of macrophyte communities.

     

Higher zooplankton species richness associated with an invertebrate top predator

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Elevational environmental stress modulating species cohabitation in nests of a social insect

1. Termite nests may offer shelter to a number of species, alleviating the effects of environmental harshness. Certain elevational gradients provide variation on edaphoclimatic features, possibly generating harsh environmental conditions and boosting the number of immigrants seeking shelter within termitaria. Therefore, it is expected that metrics describing the community of termitaria cohabitants would correlate with elevation.
2. To test this hypothesis, we surveyed the termitophiles inhabiting 20 nests of Nasutitermes coxipoensis along an elevational gradient in a tropical mountain in Brazil. We assessed the richness, abundance, and composition (β‐diversity) of termite nests' cohabitants, testing nest volume and elevational position as explanatory covariates.
3. We found a positive correlation between the elevation at which termitaria were located and the richness and abundance of cohabiting termitophiles. Additionally, no correlation was found between elevational distance and dissimilarity of cohabitant communities between termitaria. Hence, the understanding that termitaria work as an ‘oasis’ of favorable microclimate is reinforced by our findings that the composition changed but was not correlated to elevation.
4. In short, environmental harshness boosts the establishment of distinct species of termitophiles in termitaria and it does so regardless of the invading species identity.

     

Predicting patterns of vascular plant species richness with composite variables: a meso-scale study in Finnish Lapland

This paper is an attempt, using statistical modelling techniques, to understand the patterns of vascular plant species richness at the poorly studied meso-scale within a relatively unexplored subarctic zone. Species richness is related to floristic-environmental composite variables, using occurrence data of vascular plants and environmental and spatial predictor variables in 362 1 km² grid squares in the Kevo Nature Reserve. Species richness is modelled in two different way. First, by detecting the major floristic-environmental gradients with the ordination procedure of canonical correspondence analysis, and subsequently relating these ordination axes to species richness by generalized linear modelling. Second, species richness is directly related to the composite environmental factors of explanatory variables, using partial least squares regression. The most important explanatory variables, as suggested by both approaches, are relatively similar, and largely reflect the influence of altitude or altitudinally related variables in the models. The most prominent floristic gradient in the data runs from alpine habitats to river valleys, and this gradient is the main source of variation in species richness. Some local environmental variables are also relatively important predictors; the grid squares rich in vascular plant taxa are mainly located in the lowlands of the reserve and are characterised by rivers and brooks, as well as by abundant cliff walls. The two statistical models account for approximately the same amount of variation in the species richness, with more than half of the variation unexplained. Potential reasons for the relatively modest fit are discussed, and the results are compared to the characteristics of the diversity-environment relationships at both broader- and finer-scales.     

Species richness and assemblage structure of Trichoptera in Danish streams

• 1 Species richness and assemblages of Trichoptera from 157 ‘pristine’ Danish lowland stream sites were analyzed, for dependence on geographical position of the sites and simple physical variables, using two way indicator species analysis and detrended correspondence analysis.
• 2 A total of 106 species were recorded, representing ≈ 90% of the species pool known from Danish streams. Only seven species occurred at more than half the sites, whereas an additional 11 species were found at more than a quarter of the sites.
• 3 Although sites showed significant regional differences in environmental variables (stream order, width, slope and presence/absence of riparian forest), species richness and assemblages were primarily correlated with stream order, width and slope. Maximum richness was found at the largest (5th order) stream sites.
• 4 Regional differences in species assemblages were found, with several species being absent from the islands Funen and Bornholm. Species assemblages also differed between forested and non‐forested stream sites.
• 5 We found evidence that stream temperature may be of only minor importance in determining Trichoptera species richness and assemblage composition in Danish streams compared to other size‐related physical factors.

     

Environmental determinants of amphibian and reptile species richness in China

Understanding the factors that regulate geographical variation in species richness has been one of the fundamental questions in ecology for decades, but our knowledge of the cause of geographical variation in species richness remains poor. This is particularly true for herpetofaunas (including amphibians and reptiles). Here, using correlation and regression analyses, we examine the relationship of herpetofaunal species richness in 245 localities across China with 30 environmental factors, which include nearly all major environmental factors that are considered to explain broad-scale species richness gradients in such theories as ambient energy, water–energy dynamics, productivity, habitat heterogeneity, and climatic stability. We found that the species richness of amphibians and reptiles is moderately to strongly correlated with most of the environmental variables examined, and that the best fit models, which include explanatory variables of temperature, precipitation, net primary productivity, minimum elevation, and range in elevation, explain ca 70% the variance in species richness for both amphibians and reptiles after accounting for sample area. Although water and temperature are important explanatory variables to both amphibians and reptiles, water variables explain more variance in amphibian species richness than in reptile species richness whereas temperature variables explain more variance in reptile species richness than in amphibian species richness, which is consistent with different physiological requirements of the two groups of organisms.     

Dependence of broad-scale geographical variation in fleshy-fruited plant species richness on disperser bird species richness

Aim We analysed the interdependence of avian frugivore‐ and fruited plant‐species richness at the scale of major river basins across Europe, taking into account several environmental factors along different spatial gradients. Location Continental Europe and the British Isles. Methods We focused on wintering birds and autumn/winter fruiting plants, and used major river basins as geographical units and Structural Equation Modelling as the principal analytical tool. Results The statistical influence of disperser species richness on fleshy‐fruited plant species richness is roughly double that of the reverse. Broad‐scale variation in frugivore richness is more dependent on environmental factors than on fruited plant richness. However, the influence of disperser richness on plant richness is four times higher than the influence of environmental factors. Environmental influences on both birds and plants are greater than purely spatial influences. Main conclusions Our results are interpreted as indicating that biotic dispersal of fruits strongly affects broad‐scale geographical trends of fleshy‐fruited plant species richness, whereas richness of fruited plants moderately affects frugivore richness.     

Latitudinal variation in global range-size of aquatic macrophyte species shows evidence for a Rapoport effect

1. To test hypotheses concerning the applicability of the Rapoport effect (RE: “species that occur at higher latitudes tend to have greater geographical range-size than species which have ranges limited to latitudes closer to the equator”) to aquatic macrophytes at global scale, we analysed the world latitudinal distribution and range-size of 1,083 vascular aquatic macrophyte species, from 91 genera in 11 families. We targeted macrophyte families strongly associated with inland aquatic habitats (i.e. with a zero, or only very low, proportion of constituent species which occur also in non-aquatic habitats), and which are distributed across a substantial latitudinal gradient, a necessary condition to test our hypotheses.
2. The macrophyte species present in these families include plants from all the normally accepted life form-defined functional groups of macrophytes, namely submerged, free-floating, floating-leaf rooted and emergent species, and represent the three major vascular taxonomic groups occurring as aquatic macrophytes (ferns/fern allies, monocots, and dicots). For the analysis, we used both latitude-only and areal measures of macrophyte species geographic range-size, within a 10 × 10° (latitude × longitude) grid of 238 grid cells, covering the six world ecozones (Palaearctic, Orient, Australasia, Nearctic, Neotropics, Afrotropics) that primarily contain inland freshwater and brackish macrophyte habitats.
3. The results provide new insight into the relationships between global range-size of macrophytes, latitude, and other potential spatio-environmental and anthropogenic drivers acting upon these plants at world scale. In particular, the outcomes indicated that: (1) the range-size versus latitude distribution of macrophytes shows evidence of a strong RE influence, with significantly greater species range-size at higher latitudes; and (2) the β-diversity pattern of species distribution along this latitudinal gradient is poorly explained by nestedness organisation, and species turnover is a more likely explanation of the observed changes in species distribution with latitude.
4. Spatio-environmental and anthropogenic variables other than latitude may also influence the observed global geographical pattern of macrophyte range-size, although their importance as predictors varies between individual families. Extent of agricultural land use, altitude, and historic (post-Quaternary) climate change velocity were all significant predictor variables for some families. However, interestingly, neither the area of land nor the area of waterbody present per grid cell were major influences on macrophyte range-size distribution.
5. Our finding of evidence for an RE, acting at global scale in aquatic macrophytes, contributes to increasing the generality of conclusions so far reached about the large-scale factors that drive patterns of species range-size at global scale. The study also provides a baseline for future macroecological work on aquatic plants, and potentially other freshwater organisms, particularly in the context of predicting how the world ranges of freshwater biota will respond to ongoing global environmental change.

     

Environmental effects on species richness of macrophytes in Slovak streams

The effect of 19 environmental variables on species richness of macrophytes was studied in 39 Slovak streams. The studied streams were poor in species; in total, 88 macrophyte taxa were found and the average number of macrophytes per sampling site was 4, ranging from 0 to15. The most frequently occurring macrophytes were filamentous algae (occurrence at 38.6% of sampling sites), followed by Rhynchostegium riparioides (28.4%) and Phalaris arundinacea (19.3%). The strongest environmental gradient in the sampling site detected by factor analysis (factor 1 explains more than 32% variability) is related to the portion of artificial banks, shading by woody vegetation along banks, flexuosity of stream course and the portion of natural land cover in the contact zone of the stream, and can be interpreted as a natural-anthropogenic gradient. The following variables had the highest correlations with species richness of macrophytes: shading by woody vegetation (r=?0.507), portions of artificial bank (r=0.488), flexuosity (r=?0.457) and distance from stream source (r=0.388).     

Surface water connectivity drives richness and composition of Arctic lake fish assemblages

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Community isolation drives lower fish biomass and species richness,but higher functional evenness,in a river metacommunity

1. The flow of individuals among communities and their interactions with local environmental filters are increasingly recognised as determinants of biodiversity patterns in riverine ecosystems. Both incoming dispersers and local conditions are expected to systematically change along connectivity gradients from headwaters to downstream communities. However, the interplay between isolation-centrality gradients and environmental conditions as determinants of biodiversity structure and function has seldom been considered.
2. Here, we represented the dendritic structure of the Negro River basin riverscape (Uruguay) in a directed graph quantifying the isolation-centrality of each river section and evaluated the direct and indirect pathways by which riverscape structure and environmental local drivers determine fish community assembly.
3. Fish communities (n = 58) were sampled following a stratified sampling design that properly represents this isolation-centrality connectivity gradient through the riverscape. In each community, fish abundance, biomass, richness, and functional diversity were estimated, and the direct and indirect hypothesised connections among them were evaluated with structural equation models.
4. We showed that the range of isolation among river sections determines a 2-fold, 5-fold, and 25-fold variation in total fish richness, abundance, and biomass, respectively. Additionally, isolation-centrality was positively associated with local temperature and conductivity, while negatively related to local depth. These variables and taxonomic richness accounted for most of the variation in total fish biomass (81%) herein used as measurement of ecosystem function. Local fish abundance was negatively and positively associated with functional evenness and taxonomic richness, respectively. Furthermore, once the effect of isolation on biomass and richness was accounted for, an effect of diversity on biomass became evident.
5. Our results provide empirical evidence for the role of riverscape structure on taxonomic and functional diversity, biomass, and the relationship between biodiversity and ecosystem function. We emphasise that in the understanding of river biodiversity and its management, local determinants should not be considered without attention to metacommunity processes.

     

Spatial and temporal patterns of species richness in a riparian landscape

Aim To test for control of vascular plant species richness in the riparian corridor by exploring three contrasting (although not mutually exclusive) hypotheses: (1) longitudinal patterns in riparian plant species richness are governed by local, river‐related processes independent of the regional species richness, (2) riparian plant species richness is controlled by dispersal along the river (longitudinal control), and (3) the variation in riparian plant species richness mirrors variation in regional richness (lateral control). Location The riparian zones of the free‐flowing Vindel River and its surrounding river valley, northern Sweden. Methods We used data from three surveys, undertaken at 10‐year intervals, of riparian reaches (200‐m stretches of riverbank) spanning the entire river. In addition, we surveyed species richness of vascular plants in the uplands adjacent to the river in 3.75‐km² large plots along the same regional gradient. We explored the relationship between riparian and upland flora, and various environmental variables. We also evaluated temporal variation in downstream patterns of the riparian flora. Results Our results suggest that local species richness in boreal rivers is mainly a result of local, river‐related processes and dispersal along the corridor. The strongest correlation between species richness and the environment was a negative one between species number and soil pH, but pH varied within a narrow range. We did not find evidence for a correlation between species richness on regional and local scales. We found that the local patterns of species richness for naturally occurring vascular plants were temporally variable, probably in response to large‐scale disturbance caused by extreme floods. Most previous studies have found a unimodal pattern of species richness with peaks in the middle reaches of a river. In contrast, on two of three occasions corresponding to major flooding events, we found that the distribution of species richness of naturally occurring vascular plants resembled that of regional diversity: a monotonic decrease from headwater to coast. We also found high floristic similarity between the riparian corridor and the surrounding landscape. Main conclusions These results suggest that local processes control patterns of riparian species richness, but that species composition is also highly dependent on the regional species pool. We argue that inter‐annual variation in flood disturbance is probably the most important factor producing temporal variability of longitudinal species richness patterns.     

Environmental drivers of freshwater macrophyte diversity and community composition in calcareous warm‐water rivers of America and Africa

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Patterns of richness across forest beetle communities—A methodological comparison of observed and estimated species numbers

1. Species richness is a frequently used measure of biodiversity. The compilation of a complete species list is an often unattainable goal. Estimators of species richness have been developed to overcome this problem. While the use of these estimators is becoming increasingly popular, working with the observed number of species is still common practice.
2. To assess whether patterns of beetle communities based on observed numbers may be compared among each other, we compared patterns from observed and estimated numbers of species for beetle communities in the canopy of the Leipzig floodplain forest. These patterns were species richness and the number of shared species among three tree species and two canopy strata.
3. We tested the applicability of the asymptotic Chao1 estimator and the estimate provided by the nonasymptotic rarefaction–extrapolation method for all tree species and both upper canopy and lower canopy. In the majority of cases, the ranking patterns of species richness for host tree species and strata were the same for the observed and estimated number of species. The ranking patterns of the number of species shared among host tree species and strata, however, were significantly different between observed and estimated values.
4. Our results indicate that the observed number of species under‐represents species richness and the number of shared species. However, ranking comparisons of published patterns based on the number of observed species may be acceptable for species richness but likely not reliable for the number of shared species. Further studies are needed to corroborate this conclusion. We encourage to use estimators and to provide open access to data to allow comparative assessments.

     

Patterns of fish species richness in the Seine River basin,France

Variation in fish assemblage structure was examined in different rivers of the Seine Basin. Factor analysis was used to identify similarities among samples and species, and to show ichtyological changes along an upstream-downstream gradient. Fish species richness was correlated with catchment area, distance from the source and number of individuals. Relationships between species richness and number of individuals in a sample were largely an artifact of sampling.Species richness increased with river size, reached a maximum in midsize rivers, then decreased in large rivers. This species richness pattern was consistent with the model of the River Continuum Concept. However, possible causes could include greater pollution effects in large rivers. Distribution of feeding guilds was related to river size. Species richness and proportion of omnivores and piscivores increased with river size, whereas species richness and proportion of invertivores declined downstream. These patterns suggest that trophic diversity of fish assemblages may be related to food availability.     

Theoretical habitat templets, species traits, and species richness: aquatic macrophytes in the Upper Rhône River and its floodplain

• 1 The objective of this study, which is based on forty-two species of hydrophytes and helophytes, is to investigate: (i) relationships among species traits; (ii) habitat utilization by species; (iii) the relationship between species traits and habitat utilization; (iv) trends in species traits in the framework of spatial–temporal habitat variability, and if trends match predictions from the river habitat templet; and (v) trends in species richness in the framework of spatial–temporal habitat variability, and if trends match predictions of the patch dynamics concept.
• 2 Two data sets were used for this analysis: species traits (mainly reproductive and morphological characteristics) were documented from the literature; and species distribution across eight habitat types was from field surveys conducted in the floodplain of the Upper Rhone River, France. This information was structured by a fuzzy coding technique and analysed by ordination methods.
• 3 Several species traits, which are related to disturbances and reflect resistance (e.g. attachment to soil or substrate) or resilience (e.g. potential for regeneration of an individual), are closely related for aquatic macrophytes.
• 4 Habitat utilization by aquatic macrophytes separates the habitat types along a gradient of connectivity with the main channel, which corresponds to a gradient in flood disturbance frequency and the permanence of the different water-bodies.
• 5 The relationship between species traits and habitat utilization is highly significant, indicating that a particular set of habitat types is used by taxa with a particular set of species trait modalities.
• 6 Observations in one habitat templet (in which scaling of the templet is primarily based on water level fluctuations for the temporal variability axis and on substrate characteristics for the spatial variability axis) generally do not support predictions on trends in species traits but do support predictions on trends in species richness.
• 7 Observations in an alternative habitat templet (in which scaling of the templet is based on frequency of flood scouring for the temporal variability axis and on heterogeneity of the substrate for the spatial variability axis) support theoretical predictions on trends for about half of the species traits for which predictions were available. However, trends in species richness in this alternative habitat templet are only partly in agreement with predictions.

     

Peninsula effect and species richness gradient in terrestrial mammals on the Korean Peninsula and other peninsulas

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Patterns of woody plant species richness in the Iberian Peninsula: environmental range and spatial scale

Aim Climate‐based models often explain most of the variation in species richness along broad‐scale geographical gradients. We aim to: (1) test predictions of woody plant species richness on a regional spatial extent deduced from macro‐scale models based on water–energy dynamics; (2) test if the length of the climate gradients will determine whether the relationship with woody species richness is monotonic or unimodal; and (3) evaluate the explanatory power of a previously proposed ‘water–energy’ model and regional models at two grain sizes. Location The Iberian Peninsula. Methods We estimated woody plant species richness on grid maps with c. 2500 and 22,500 km² cell size, using geocoded data for the individual species. Generalized additive models were used to explore the relationships between richness and climatic, topographical and substrate variables. Ordinary least squares regression was used to compare regional and more general water–energy models in relation to grain size. Variation partitioning by partial regression was applied to find how much of the variation in richness was related to spatial variables, explanatory variables and the overlap between these two. Results Water–energy dynamics generate important underlying gradients that determine the woody species richness even over a short spatial extent. The relationships between richness and the energy variables were linear to curvilinear, whereas those with precipitation were nonlinear and non‐monotonic. Only a small fraction of the spatially structured variation in woody species richness cannot be accounted for by the fitted variables related to climate, substrate and topography. The regional models accounted for higher variation in species richness than the water–energy models, although the water–energy model including topography performed well at the larger grain size. Elevation range was the most important predictor at all scales, probably because it corrects for ‘climatic error’ due to the unrealistic assumption that mean climate values are evenly distributed in the large grid cells. Minimum monthly potential evapotranspiration was the best climatic predictor at the larger grain size, but actual evapotranspiration was best at the smaller grain size. Energy variables were more important than precipitation individually. Precipitation was not a significant variable at the larger grain size when examined on its own, but was highly significant when an interaction term between itself and substrate was included in the model. Main conclusions The significance of range in elevation is probably because it corresponds to several aspects that may influence species diversity, such as climatic variability within grid cells, enhanced surface area, and location for refugia. The relative explanatory power of energy and water variables was high, and was influenced by the length of the climate gradient, substrate and grain size of the analysis. Energy appeared to have more influence than precipitation, but water availability is also determined by energy, substrate and topographic relief.