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1.
Accurate determination of the population density of key focal species is necessary for monitoring the success of management programs and ecosystem health across a wide range of contexts. Unfortunately, many key taxa are visually cryptic and thus difficult to count using traditional observation‐based techniques. Bell miners (Manorina melanophrys), are just such a species. They are widespread throughout south‐eastern Australia, yet they are critical to monitor given their association and potential causal link to spreading vegetative dieback in this region. A new passive acoustic monitoring technique was trialled by testing its ability to determine population densities of bell miner colonies via counting the distinctive ‘tink’ vocalization of this species. This call was given at a constant rate per individual, and at a common amplitude across 10 colonies throughout the entire geographic range of the species. Theoretical sound transmission and playback trials through typical habitat determined that any bird within a 50‐m radius of the recorders used would be louder than 70 dB, enabling this threshold amplitude to be used to determine the number of birds in a 50 m radius of the recorder. Field trials of the acoustic protocol versus human observers using traditional visual surveys found that passive acoustic monitoring was able to detect more individuals, using a less expensive protocol that drastically reduced the need for observer training or expertise. Sound therefore offers a reliable method for determining the density of this vocal, but visually cryptic species. We present methods for calibrating recording devices and detecting calls louder than species‐specific thresholds using readily available freeware, enabling our methods to be easily adapted to census a variety of acoustically distinctive species, offering a more effective, yet lower cost and in our case more efficient census technique for surveying difficult species.  相似文献   

2.
  1. Burbot (Lota lota: Gadidae) is a difficult species to manage effectively due to its preference for deep-water habitats and under-ice spawning behaviour, resulting in a poor understanding of its reproductive activity. However, the use of acoustic signalling by burbot as part of their mating system has recently been described and this behaviour may provide a means of investigating questions regarding the spatial and temporal distribution of spawning aggregations using passive acoustic monitoring.
  2. We used audio and video recording to confirm that burbot vocalise and that these vocalisations can be detected under field conditions as well as to characterise the relationship between burbot acoustic signalling and spawning behaviour. We also evaluated the feasibility of locating and monitoring burbot spawning aggregations in real time using passive acoustics.
  3. Burbot vocalisations were difficult to identify with only about 6% of the recordings containing calls being successfully identified as such in the field. Burbot vocalised more often between sundown and sunrise than during daylight hours. Calls recorded at night tended to be lower frequency, longer duration, and have lower bandwidth than those made during the day.
  4. Burbot vocalisations could not be recorded in conjunction with video recordings of spawning activity, indicating that burbot may not call during active spawning, but may use acoustic communication to signal the onset of reproductive readiness and to form pre-spawning aggregations.
  5. While burbot calls were readily identifiable, observers had a difficult time identifying burbot calls in real time under field conditions. Passive acoustic monitoring demonstrates considerable potential as a management tool to locate burbot spawning grounds and identify periods of activity, but may not be an appropriate technique for monitoring spawning activity in real time.
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3.
Monitoring on the basis of sound recordings, or passive acoustic monitoring, can complement or serve as an alternative to real-time visual or aural monitoring of marine mammals and other animals by human observers. Passive acoustic data can support the estimation of common, individual-level ecological metrics, such as presence, detection-weighted occupancy, abundance and density, population viability and structure, and behaviour. Passive acoustic data also can support estimation of some community-level metrics, such as species richness and composition. The feasibility of estimation and certainty of estimates is highly context dependent, and understanding the factors that affect the reliability of measurements is useful for those considering whether to use passive acoustic data. Here, we review basic concepts and methods of passive acoustic sampling in marine systems that often are applicable to marine mammal research and conservation. Our ultimate aim is to facilitate collaboration among ecologists, bioacousticians, and data analysts. Ecological applications of passive acoustics require one to make decisions about sampling design, which in turn requires consideration of sound propagation, sampling of signals, and data storage. One also must make decisions about signal detection and classification and evaluation of the performance of algorithms for these tasks. Investment in the research and development of systems that automate detection and classification, including machine learning, are increasing. Passive acoustic monitoring is more reliable for detection of species presence than for estimation of other species-level metrics. Use of passive acoustic monitoring to distinguish among individual animals remains difficult. However, information about detection probability, vocalisation or cue rate, and relations between vocalisations and the number and behaviour of animals increases the feasibility of estimating abundance or density. Most sensor deployments are fixed in space or are sporadic, making temporal turnover in species composition more tractable to estimate than spatial turnover. Collaborations between acousticians and ecologists are most likely to be successful and rewarding when all partners critically examine and share a fundamental understanding of the target variables, sampling process, and analytical methods.  相似文献   

4.
Patterns of vocal activity may involve information about vocalizations themselves as well as their function. In birds, vocal activity at the individual and population level is generally closely associated with breeding cycles, reaching the peak during territorial and mating competition, and decreasing with the onset of egg incubation and chick feeding. However, little is known about patterns of vocal activity in avian brood parasites that have unusual breeding cycles without parental care. Using passive acoustic monitoring, we determined the seasonal and diurnal patterns of population vocal activity in two avian brood parasites: the Common Cuckoo Cuculus canorus and the Lesser Cuckoo C. poliocephalus. We found that both species and both sexes showed a similarly highly structured pattern of seasonal vocal activity, reaching a sharp peak in the early breeding season when birds compete for territories and mates, although males sang more frequently than females. Likewise, the diurnal patterns of vocal activity were similar in both species and both sexes of cuckoos, with peak activity occurring around dawn. Nocturnal calls by male cuckoos were also detected in both species, but only in the early breeding season. Collectively, the observed patterns of population vocal activity may suggest that the absence of parental care may not extend the period of vocal activity in these two species of brood parasites.  相似文献   

5.
Reliable estimation of the size or density of wild animal populations is very important for effective wildlife management, conservation and ecology. Currently, the most widely used methods for obtaining such estimates involve either sighting animals from transect lines or some form of capture‐recapture on marked or uniquely identifiable individuals. However, many species are difficult to sight, and cannot be easily marked or recaptured. Some of these species produce readily identifiable sounds, providing an opportunity to use passive acoustic data to estimate animal density. In addition, even for species for which other visually based methods are feasible, passive acoustic methods offer the potential for greater detection ranges in some environments (e.g. underwater or in dense forest), and hence potentially better precision. Automated data collection means that surveys can take place at times and in places where it would be too expensive or dangerous to send human observers. Here, we present an overview of animal density estimation using passive acoustic data, a relatively new and fast‐developing field. We review the types of data and methodological approaches currently available to researchers and we provide a framework for acoustics‐based density estimation, illustrated with examples from real‐world case studies. We mention moving sensor platforms (e.g. towed acoustics), but then focus on methods involving sensors at fixed locations, particularly hydrophones to survey marine mammals, as acoustic‐based density estimation research to date has been concentrated in this area. Primary among these are methods based on distance sampling and spatially explicit capture‐recapture. The methods are also applicable to other aquatic and terrestrial sound‐producing taxa. We conclude that, despite being in its infancy, density estimation based on passive acoustic data likely will become an important method for surveying a number of diverse taxa, such as sea mammals, fish, birds, amphibians, and insects, especially in situations where inferences are required over long periods of time. There is considerable work ahead, with several potentially fruitful research areas, including the development of (i) hardware and software for data acquisition, (ii) efficient, calibrated, automated detection and classification systems, and (iii) statistical approaches optimized for this application. Further, survey design will need to be developed, and research is needed on the acoustic behaviour of target species. Fundamental research on vocalization rates and group sizes, and the relation between these and other factors such as season or behaviour state, is critical. Evaluation of the methods under known density scenarios will be important for empirically validating the approaches presented here.  相似文献   

6.
Ecoacoustic techniques using multiple acoustic sensors and two metrics of the acoustic community – the acoustic complexity index (ACI) and the chorus ratio (CR) – were successfully used to describe and characterize the morning acoustic activity of birds according to three equal temporal intervals during spring 2013: Dawn Chorus, Post Chorus 1, and Post Chorus 2.The metrics were applied across five Italian Mediterranean locations (Valenza, Madonna dei Colli, Monte Curto, Virolo, Croce di Tergagliana) that differed by land-cover typologies. Results from the ACI metrics showed a peak during the Dawn Chorus and a visible lull close to sunrise between Dawn Chorus and Post Chorus 1.The lull was evident in all localities except Valenza, where singing activity was relatively constant across the successive morning intervals. Temperature and vegetation structure were confirmed as important factors associated with morning acoustic activities. Vegetation evenness and temperature across the season was negatively correlated with ACI, whereas CR was positively correlated with temperature and vegetation diversity. Of the 33 species of birds identified during the maximum dawn chorus activity, Blackcap, Blackbird, European Robin, and Great Tit were acoustically dominant and their activity was significantly higher before sunrise except for Blackcap, whose acoustic activity showed no significant differences across time intervals. The dawn chorus is one of the most conspicuous behaviours of birds, engendering much speculation but no definitive, univocal explanations. The ecoacoustic approach opens a new perspective for investigating this complex phenomenon.  相似文献   

7.
The Horned Guan (Oreophasis derbianus) is a cracid restricted to cloud forests in the Sierra Madre of Chiapas in Mexico and the western-central Mountains in Guatemala. It is an endangered species and urgent conservation measures are required, such as non-invasive monitoring techniques. Here, we study individual features in the boom calls of Horned Guans. Boom calls are acoustic signals used by males during courtship and territorial displays. This call is made of seven notes, divided into two parts: an introductory section characterized by low-amplitude notes and a body section characterized by high-amplitude notes. We recorded 10 males during the breeding seasons of 2010 and 2011 in two captive populations and measured 22 acoustic variables of the calls. We used a combination of statistical analyses to test individuality in Horned Guan vocalizations. Our results showed that time-related variables – but not frequency-related traits – varied between individuals, and that individual calls showed no variation between years. Our results suggest that Horned Guan individuals can be distinguished using fine structural characteristics of their calls and that calls remain stable across years. We argue that such vocal signature could be used to track wild populations as a non-invasive technique in order to improve census data in the short and long term.  相似文献   

8.
Natural resource extraction is increasing rapidly in tropical forests, but we lag behind in understanding the impacts of these disturbances on biodiversity. In high diversity tropical habitats, acoustic monitoring is an efficient tool for sampling a large proportion of the fauna across varied spatial and temporal scales. We used passive acoustic monitoring in a pre-montane forest in Peru to investigate how soundscape composition and richness of acoustic frequencies varied with distance from a natural gas exploratory well and with operational phase (construction and drilling). We also evaluated how anuran and avian species richness and vocal activity varied with distance and between phases. Soundscape analyses showed that acoustic frequency similarity was greatest among sites closer to (≤250 m) and farther from (≥500 m) the platform. Soundscapes revealed more frequencies were used during construction and showed a weak trend of increasing frequency richness with increasing distance from the disturbance. Avian species richness and detections increased with distance from the platform, but anuran richness and detections declined with distance. Operational phase did not play a significant role in overall richness or activity patterns of either group. Among birds, insectivore detections increased with distance from the platform, and nectarivores were detected more frequently during the drilling phase. Results demonstrate that acoustic monitoring and soundscape analyses are useful tools for evaluating the impact of development activity on the vocalizing community, and should be implemented as a best practice in monitoring biodiversity and for guiding specific mitigation strategies.  相似文献   

9.
10.
  1. In the context of global amphibian decline, monitoring and restoration programmes are important. Acoustic monitoring is a possible approach for underwater vocalising species like the rapidly declining European common spadefoot toad (Pelobates fuscus). In this study, our aim was to design a dedicated software detector to be used in combination with programmable audio recorders to process the large amount of data generated by long-term acoustic monitoring and to use it for investigating the seasonal and circadian patterns of P. fuscus vocal activity.
  2. The software detector targets advertisement calls of the species. Based on acoustic analysis of that call, we developed a detector that utilises both frequency and time features of the calls. Data collected during three breeding seasons in four known or potential P. fuscus breeding sites of north-eastern France were used to build a ground truth in order to test the performance of the detector. Then, we used the detector for analysing four acoustic monitoring campaigns conducted in two different sites over two breeding seasons to gain insight into the seasonal and circadian patterns of vocal activity of this species.
  3. Evaluation of the P. fuscus call detector against a ground truth returned false-positive rates below 1.5% and true-positive rates ranging from 53% to 73%. These figures are compatible with long-term monitoring of the presence of the species. Running the software detector on standard hardware, the computation time for post-processing the 360 hr of a typical 3-month monitoring campaign was less than 1 day.
  4. The seasonal pattern of P. fuscus underwater vocal activity is more complex than previously recognised. Over the whole ostensible 3-month breeding season, the actual time window for vocalising and breeding can last from a few days up to several weeks and may be split into clearly distinct episodes. When vocalisations occurred at both night- and daytime, the circadian vocal activity of P. fuscus occasionally proceeded uninterrupted for 24 hr but usually a several hour lull occurred immediately prior to sunset. When vocalisations occurred at both night- and daytime, the vocal activity pattern followed a bimodal distribution with a nocturnal highest peak of activity and a second peak occurring in the morning.
  5. Our results demonstrate that it is feasible to monitor presence of P. fuscus in north-eastern France using a dedicated software detector combined with programmable audio recorders. Based on the outcomes of the detector applied to long-term audio data sets, we reveal temporal patterns of the vocal activity of the species and subsequently provide recommendations for attended and unattended acoustic monitoring.
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11.
Automatic click detectors and full-bandwidth sound recorders are widely used in passive acoustic monitoring of small cetaceans. Detection of these signals depends on a variety of factors, including signal to noise ratio. Passive acoustic monitoring is often used to study impact of underwater noise on small cetaceans, but as detection probability is affected by changes in signal to noise ratio, variable noise levels may affect conclusions drawn from these experiments. Therefore, we examine how different detectors and filters perform in varying ocean noise conditions. C-PODs and full-bandwidth recorders (Wildlife Acoustics, SM2M+) were deployed at two stations in an environment with fluctuating ambient noise for 42 days. Noise level and harbour porpoise (Phocoena phocoena) click trains simultaneously recorded on both loggers were compared. Overall, we found that porpoise click detections by the algorithm used to analyse full-band recorder data (Pamguard) paralleled detections by the C-POD. However, Pamguard detected significantly more clicks than the C-POD. A decrease in detections was seen for both loggers with increasing noise in the band 20 –160 kHz, in particular for levels above 100 dB re 1μPa rms. We also found that the Pamguard detection function changed the least over varying noise conditions when compared to the C-POD detectors. This study sheds light on the fact that inference of animal presence/absence or density that are based on echolocation cues (here, Porpoise Positive Minutes) shall account for the acoustic environments where probability of detecting signals may be affected by variability in ambient noise levels.  相似文献   

12.
Lake sturgeon (Acipenser fulvescens) are endangered in the Laurentian Great Lakes with increasing binational efforts to establish spawning grounds to aid restoration. While SCUBA surveys can document spawning activity, these are labour-intensive and may disrupt spawning. We used passive acoustic monitoring to quantify spawning sounds of lake sturgeon as a first step to developing remote sensing of sturgeon spawning grounds. Acipenser sp. are known to make a variety of sounds including, “thunders” (aka drums), which have been documented in A. fulvescens during spawning. We quantified drums from a known spawning bed. We recorded 5 different potential sturgeon sounds but only quantified drums as a marker for spawning activity. Drums were low frequency with average frequency peaks at 40 and 92 Hz and a rapid drop-off thereafter. There was no relationship between calling activity and water temperature but calling activity increased as the summer progressed. Call production was most active from 0600 to 1500 h with little calling activity during nighttime recordings. The presence of low frequency boat sounds did correlate with a reduction in maximum calling rate so it is possible that commercial shipping may disrupt sturgeon communication, but more research is necessary to separate correlational from causative effects. These recordings represent a promising approach to map sturgeon spawning activity and show the potential effect of human activity on communication in this threatened species.  相似文献   

13.
Aim To test the ‘more individuals hypothesis’ as a mechanism for the positive association between energy availability and species richness. This hypothesis predicts that total density and energy use in communities is linearly related to energy availability, and that species richness is a positive function of increased density. We also evaluate whether similar energy–density patterns apply to different migratory groups (residents, short‐distance migrants and tropical migrants) separately. Location European and North American forest bird communities. Methods We collected published breeding bird census data from Europe and North America (n = 187). From each census data we calculated bird density (pairs 10 ha?1), energy use by the community (the sum of metabolic needs of individuals, Watts 10 ha?1) and geographical location with an accuracy of 0.5°. For each bird census data coordinate we extracted the corresponding monthly values of actual evapotranspiration (AET). From these values we calculated corresponding AET values that we expected to explain the density energy use of forest birds: total annual, breeding season (June) and winter AET. We used general linear modelling to analyse these data controlling for the area of census plots, forest type and census method. Results Total density and energy use in European and North American forest bird communities were linear functions of annual productivity, and increased density and energy use then translated into more species. Also resident bird density and energy consumption were positive functions of annual productivity, but the relationship between productivity and density as well as between productivity and energy use was weaker for migrants. Main conclusions Our results are consistent with the more individuals hypothesis that density and energy use in breeding forest bird communities is coupled tightly with the productivity of the environment, and that increased density and energy consumption results in more species. However, not all community members (migratory groups) are limited by productivity on the breeding grounds.  相似文献   

14.
Capsule King Penguins recognize their mates by voice, but Guillemots do not need acoustic cues even though their calls show individual variation.

Aims To determine whether the structure of Guillemot calls could allow individual recognition, as with King Penguin, and whether acoustic cues are used to locate mates among a dense mass of conspecifics at a colony.

Methods Observations were made on breeding Guillemots and King Penguins. Calls made by birds returning to their mates were recorded, the signals digitized and the calls analysed. Calls were later played back to the mates of the birds concerned and the effects noted on both them and their neighbours.

Results Both Guillemots and King Penguins emitted calls on return to the breeding site which contained individual signatures and were therefore potentially usable for mate recognition. In King Penguins, auditory recognition was essential for finding a mate, whereas in Guillemots most of the arriving birds located their mate in a dense crowd of conspecifics without the help of acoustic signals. Guillemots could differentiate neighbours from strangers without auditory cues.

Conclusion Calls are essential for the successful identification of mates by King Penguins but not by Guillemots.  相似文献   

15.
The acoustic adaptation hypothesis (AAH) predicts that acoustic signals are selected to propagate more efficiently in the habitat where they are normally transmitted. Several studies corroborated the AAH for primates and birds, but evidence for frogs is contentious: While most studies failed to support the AAH, recent studies have shown that within-species variation conforms to the predictions of the AAH. Herein, we test the AAH by comparing advertisement calls of Phyllomedusa nordestina from two contrasting habitats (Atlantic Rainforest and Caatinga) and by testing the influence of the amount of vegetation around calling sites on acoustic parameters of frog calls. The interval between pulses was significantly different between individuals from the Atlantic Rainforest and from the Caatinga, and the number of pulses was correlated with the amount of vegetation around calling sites. Hence, our results indicate that multiple evolutionary forces may act simultaneously on the advertisement calls of frogs.  相似文献   

16.
The interest shown by ecologists in antioxidants and oxidative stress as potential modulators of life‐history trade‐offs has expanded greatly in recent years. However, we still know very little about natural variation in oxidative damage and antioxidant capacity in free‐living animals. In this study, we describe the natural variation in three components of oxidative balance in nestlings and breeding females in free‐living Great Tits Parus major and Common Starlings Sturnus vulgaris in central Italy, and relate these to breeding conditions and life‐history traits. Our results suggest that there are associations among oxidative physiology, reproductive activity, growth pattern and season in wild birds, but that the nature of these associations might be species‐specific rather than general across species.  相似文献   

17.
Theoretical models of habitat selection often incorporate negative density dependence. Despite strong negative density‐dependent effects on habitat selection, more recent studies indicate that animals settle near members of their own (conspecific) and other species (heterospecific) when selecting habitat with social cues. Social cue use for habitat selection is particularly common among songbirds, but few studies have investigated if songbirds use social cues to assess conspecific or heterospecific density (as opposed to just presence/absence) when making settlement decisions. We conducted a playback experiment to evaluate if yellow warblers (Setophaga petechia) and willow flycatchers (Empidonax traillii), two potential competitors for breeding habitat, use social cues to assess density (conspecific for warblers and heterospecific for flycatchers) when selecting breeding locations at two spatial scales. We simulated yellow warbler density to be high or low at multiple treatment plots (3.14 ha) with song playback and then evaluated settlement decisions by comparing yellow warbler and willow flycatcher abundances across plots (broad‐scale habitat selection) and individual space use within plots (fine‐scale territory establishment). Yellow warbler density treatments did not affect habitat selection by yellow warblers at the broad scale, but caused individuals to cluster territories at high‐density treatments. Willow flycatchers were most abundant at high‐density treatment plots, but yellow warbler density treatments did not affect territory locations. The results indicate that perceived density affects the habitat selection process for both conspecifics and heterospecifics.  相似文献   

18.
Studying seasonal changes in the vocal activity of birds may shed light on the function of avian vocalizations and the phenology of life history events. Our current knowledge regarding the seasonality of the vocal behaviour of tropical birds in general, and avian brood parasites in particular, is very limited. Here, we employed passive acoustic monitoring with automated signal recognition to monitor the vocal behaviour of the Striped Cuckoo Tapera naevia over a complete annual cycle in the Brazilian Pantanal. We evaluated whether the pattern of vocal activity differed between the two main vocalizations of the species (sem-fim and wee-series songs) and whether vocal activity varied with time of day and season. The diel pattern of vocal activity for both vocalization types showed a bimodal pattern, with the first peak of vocal activity in the few hours after sunrise and the second peak before sunset, in agreement with prior studies in other cuckoos. The sem-fim song was also produced during the night, while the wee-series song was produced only during the day. Both vocalization types showed clear seasonality and were produced between mid-June and mid-February. Seasonal changes in vocal activity suggest that the Striped Cuckoo breeds during the dry season and leaves the study area during the flooding period. The seasonal pattern of the wee-series song showed strong seasonality, with 90% of these calls detected in September and October, whereas the sem-fim song showed weaker seasonality, with 80% of the calls detected during the July–October period. Our study indicates that automated signal recognition might be a reliable tool for monitoring cuckoos. Further research could evaluate whether the different seasonal patterns of the sem-fim and wee-series songs of the Striped Cuckoo are related to different functions.  相似文献   

19.
20.
Declining numbers of Blackpoll Warblers (Setophaga striata) have been documented at long‐term migration monitoring sites as well as in breeding areas. However, the “loop migration” of Blackpoll Warblers makes it difficult to ascribe population change at migration monitoring sites to specific breeding populations. Individuals from all populations across the breeding range of Blackpoll Warblers concentrate in fall along the Atlantic coastline of eastern North America prior to initiating a transoceanic flight to wintering areas. In spring, Blackpoll Warblers return along a different route, moving north into the southeastern United States where birds from eastern and western breeding populations then diverge during migration to reach their respective breeding areas. To monitor breeding populations outside of breeding areas and identify factors potentially affecting those populations, we must be able to identify where birds captured during migration breed and map seasonal variation in population‐specific flyways. To “map” population‐specific migration movements of Blackpoll Warblers, we used feather deuterium (δ2Hf) values and a spatially explicit model to assign molt origins of 289 Blackpoll Warblers moving through sites in the Gulf of Maine (GOM) region and at three locations further west and south (northern Great Lakes area, Pennsylvania, and Florida). The assignment method was validated with feather samples from 35 birds captured during the breeding season at Churchill, Manitoba, Canada. As predicted, the spatial pattern of movement within and between seasons reflected “loop migration.” Blackpoll Warblers captured during fall migration in the GOM region included birds from across their breeding range, whereas birds captured during the spring were exclusively from northeastern populations. During fall migration, Blackpoll Warblers captured at two sites west of the GOM were from breeding areas further northwest than those from western Canada that were captured in the GOM. Blackpoll Warblers captured in eastern Florida during spring migration were assigned exclusively to breeding areas in the northeast, suggesting that eastern and western populations diverge soon after entering the United States. Finally, most Blackpoll Warblers sampled at Manomet Bird Observatory originated from breeding populations in Alaska and western Canada that have shown a similar (70–90%) decline over the same period. Our results, therefore, not only document the “loop migration” pattern of Blackpoll Warblers, but, by mapping patterns of connectivity between breeding and non‐breeding areas, may help target conservation efforts for breeding populations of Blackpoll Warblers where most needed.  相似文献   

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