食物链长度远因与近因研究进展综述

食物链长度是生态系统的基本属性,其变化决定着群落结构和生态系统功能。稳定同位素分析技术的进步推进了生态系统中食物链长度决定因子相关研究的开展。尽管近期的研究证明了食物链长度与资源可利用性、生态系统大小、干扰等远因之间的关系,但是对于食物网内部结构变化这一近因对食物链长度的影响作用关注较少。综述了边界明确和开放类型淡水生态系统中食物链长度的相关研究进展;探讨了远因和近因机制在决定食物链长度中的作用;给出了判断不同层次和尺度上决定食物链长度机制的概念框架;为今后更好的开展不同生态系统间食物链长度的比较研究提出了建议。     

Hydrogeomorphology and river impoundment affect food-chain length of diverse Neotropical food webs

Food-chain length is a central characteristic of ecological communities that affects community structure and ecosystem function. What determines the length of food chains is not well resolved for most ecosystems. Herein, we examine environmental correlates of food-chain length based on the productivity hypothesis, compare food-chain lengths among aquatic ecosystem types and identify bi-directional effects of river impoundment on food-chain length in the Paraná River Basin of South America. Both temperature regime, a surrogate of productivity, and ecosystem type significantly affected food-chain length in independent analyses. However, when analyzed together, only ecosystem type explained significant variation in food-chain length. Food chains were longest in reservoirs, and shortest in high-gradient rivers. The proximate mechanism driving this pattern appears to be body-size ratios of primary consumers to apex predators, which differ among trophic pathways. Food chains based on phytoplankton production may have an additional size-structured link not present in food chains based on other basal sources such as detritus and algae. Hydrogeomorphology is the ultimate mechanism influencing food-chain length because it affects the relative importance of basal carbon sources supporting higher trophic levels, which through differences in the number of trophic links along the different size-structured pathways, appears to drive the observed patterns in food-chain length. We discuss a hypothesis of food-chain length that integrates energy flow and size-structure, facilitates inclusion of temporal dynamics and which is readily testable in both 'closed' and 'open' ecosystems.     

Food Webs in Relation to Variation in the Environment and Species Assemblage: A Multivariate Approach

The abiotic environment has strong influences on the growth, survival, behavior, and ecology of aquatic organisms. Biotic interactions and species life histories interact with abiotic factors to structure the food web. One measure of food-web structure is food-chain length. Several hypotheses predict a linear relationship between one environmental variable (e.g., disturbance or ecosystem size) and food-chain length. However, many abiotic and biotic variables interact in diverse ways to structure a community, and may affect other measures of food web structure besides food-chain length. This study took a multivariate approach to test the influence of several important environmental variables on four food-web characteristics measured in nine ponds along a hydroperiod gradient over two years. This approach allowed for testing the ecosystem size and dynamic constraints hypotheses while in context of other possibly interacting environmental variables. The relationship between amphibian and invertebrate communities and pond habitat variables was assessed to understand the underlying food-web structure. Hydroperiod and pond area had a strong influence on amphibian and invertebrate communities, trophic diversity and δ¹⁵N range. The range in δ¹³C values responded strongly to dissolved oxygen. Food-chain length responded to multiple environmental variables. Invertebrate and amphibian communities were structured by pond hydroperiod which in turn influenced the trophic diversity of the food web. The results of this study suggest food-chain length is influenced by environmental variation and species assemblage and that a multivariate approach may allow us to better understand the dynamics within and across aquatic food webs.     

食物链长度理论研究进展

食物链长度（Food chain length,FCL）是生态系统中最重要的特点之一,它通过改变生物间的营养关系,影响着生物多样性,群落的结构以及稳定性;它是反映食物网物质转换与能量传递的综合指数,食物链及其动态特征是生态学许多重要理论的基础,食物链长度理论的研究进展,推动了人们对水域生态系统中生物和非生物相互作用的理解。回顾了食物链长度的3种度量方法及其详细的计算方法,在此基础上简述了各方法的特点。综述了食物链长度的决定因素的4种假说（资源可利用性假说、生产力空间假说、生态系统大小假说、动态稳定性假说）及其交互作用,重点总结了湖泊食物链长度的空间格局与决定因素的研究进展。最后,食物链长度研究展望,包括食物链长度决定因子研究存在的问题及发展方向的总结,以及在在水域生态学中的应用的研究进展,例如食物链长度在指示污染物的生物富集中的研究进展、食物链食物链长度在指导生物操作、以及在食物链长度在对气候变化响应方面的研究进展等等。     

Food-chain length and adaptive foraging

Food-chain length, the number of feeding links from the basal species to the top predator, is a key characteristic of biological communities. However, the determinants of food-chain length still remain controversial. While classical theory predicts that food-chain length should increase with increasing resource availability, empirical supports of this prediction are limited to those from simple, artificial microcosms. A positive resource availability–chain length relationship has seldom been observed in natural ecosystems. Here, using a theoretical model, we show that those correlations, or no relationships, may be explained by considering the dynamic food-web reconstruction induced by predator''s adaptive foraging. More specifically, with foraging adaptation, the food-chain length becomes relatively invariant, or even decreases with increasing resource availability, in contrast to a non-adaptive counterpart where chain length increases with increasing resource availability; and that maximum chain length more sharply decreases with resource availability either when species richness is higher or potential link number is larger. The interactive effects of resource availability, adaptability and community complexity may explain the contradictory effects of resource availability in simple microcosms and larger ecosystems. The model also explains the recently reported positive effect of habitat size on food-chain length as a result of increased species richness and/or decreased connectance owing to interspecific spatial segregation.     

Testing the productive-space hypothesis: rational and power

Understanding and explaining the causes of variation in food-chain length is a fundamental challenge for community ecology. The productive-space hypothesis, which suggests food-chain length is determined by the combination of local resource availability and ecosystem size, is central to this challenge. Two different approaches currently exist for testing the productive-space hypothesis: (1) the dual gradient approach that tests for significant relationships between food-chain length and separate gradients of ecosystem size (e.g., lake volume) and per-unit-size resource availability (e.g., g C m⁻¹ year⁻²), and (2) the single gradient approach that tests for a significant relationship between food-chain length and the productive space (product of ecosystem size and per-unit-size resource availability). Here I evaluate the efficacy of the two approaches for testing the productive-space hypothesis. Using simulated data sets, I estimate the Type 1 and Type 2 error rates for single and dual gradient models in recovering a known relationship between food-chain length and ecosystem size, resource availability, or the combination of ecosystem size and resource ability, as specified by the productive-space hypothesis. The single gradient model provided high power (low Type 2 error rates) but had a very high Type 1 error rate, often erroneously supporting the productive-space hypothesis. The dual gradient model had a very low Type 1 error rate but suffered from low power to detect an effect of per-unit-size resource availability because the range of variation in resource availability is limited. Finally, I performed a retrospective power analysis for the Post et al. (Nature 405:1047–1049, 2000) data set, which tested and rejected the productive-space hypothesis using the dual gradient approach. I found that Post et al. (Nature 405:1047–1049, 2000) had sufficient power to reject the productive-space hypothesis in north temperate lakes; however, the productive-space hypothesis must be tested in other ecosystems before its generality can be fully addressed.     

Evidence for the existence of a robust pattern of prey selection in food webs

Food webs aim to provide a thorough representation of the trophic interactions found in an ecosystem. The complexity of empirical food webs, however, is leading many ecologists to focus dynamic ecosystem studies on smaller microcosm or mesocosm studies based upon community modules, which comprise three to five species and the interactions likely to have ecological relevance. We provide here a structural counterpart to community modules. We investigate food-web 'motifs' which are n-species connected subgraphs found within the food web. Remarkably, we find that the over- and under-representation of three-species motifs in empirical food webs can be understood through comparison to a static food-web model, the niche model. Our result conclusively demonstrates that predation upon species with some 'characteristic' niche value is the prey selection mechanism consistent with the structural properties of empirical food webs.     

Effects of productivity, disturbance, and ecosystem size on food-chain length: insights from a metacommunity model of intraguild predation

Traditionally, productivity and disturbance have been hypothesized as important determinants of food-chain length. More recently, growing empirical evidence suggests a strong role of ecosystem size. To theoretically explore the effects of basal productivity, disturbance, and ecosystem size on food-chain length, we develop and analyze a metacommunity model of intraguild predation (IGP). The model finds that, when local IGP is weak, increasing basal productivity, weakening disturbance, and increasing ecosystem size will generally increase food-chain length. When local IGP is strong, by contrast, increasing basal productivity or weakening disturbance favors intraguild predators and hinders the coexistence of intraguild predators and intraguild prey, limiting food-chain length. In contrast, increasing ecosystem size can promote coexistence even when local IGP is strong, increasing food-chain length through inserting intraguild prey and changing the degree of omnivory by intraguild predators. Intraguild prey needs to be the superior colonizer to intraguild predators for this to occur. We discuss that these theoretical predictions appear consistent with empirical patterns.     

食物网稳定性机制研究进展:一个基于等级系统的框架

食物网理论沟通了群落生态学和生态系统生态学,将生物多样性和生态系统功能的研究统一起来,是理解生态系统运作机制的关键。自从1973年Robert May的经典研究引发著名的"复杂性-稳定性"论辩之后,人们认识到食物网的稳定性是其结构维持、功能发挥和动态演化的一个重要前提,并开始了对食物网稳定性机制的探索。早期研究主要关注只包含拓扑关系的定性食物网,但后来人们逐渐认识到相互作用强度的重要性,并提出了诸如自限性、弱相互作用、适应性捕食等一系列机制。本文系统梳理了过往研究中模块层面的各类稳定性机制和全网层面对各模块的整合机制,从而清晰地展示了"模块-全网"双层框架的全貌。通过在其基础上的扩展,进而提出了一个基于等级系统的食物网稳定性框架,并从动力学和能量学角度,对各层级内部的稳定性机制以及层级之间的关系进行了探讨,以期为建立普适的食物网稳定性理论提供一些思路。未来的研究方向包括：①将稳定性机制的研究从食物网扩展到更一般的生态网络;②综合考虑生物物理要素、动力学稳定性、系统对能流功率的追求、环境的平稳程度、演化历史等影响因素,从而得到关于食物网结构和动态的更为深刻的认识。     

Perceptual Processes and the Maintenance of Polymorphism Through Frequency-dependent Predation

One of the key challenges of both ecology and evolutionary biology is to understand the mechanisms that maintain diversity. Negative frequency-dependent selection is a powerful mechanism for maintaining variation in the population as well as species diversity in the community. There are a number of studies showing that this type of selection, where individuals of a rare type (i.e. a rare morph or a rare species) experience higher survival than those of more common type(s). However, it is still not clear how frequency-dependent selection operates. Search image formation has been invoked as a possible, proximate explanation. Although the conceptual link between search image and frequency-dependent predation is often assumed in ecological and evolutionary studies, a review of the literature reveals a paucity of evidence demonstrating the occurrence of both in a natural predator-prey system. Advances in the field of psychology strongly support the existence of search image, yet these findings are not fully recognized in the realm of ecology and evolutionary biology, in part, we feel because of confusion and inconsistencies in terminology. Here we try to simplify the language, clarify the advances in the study of frequency-dependent predation and search image, and suggest avenues for future research. We feel that the investigations of both proximate (perceptual mechanisms) and ultimate (pattern of predation) processes are necessary to fully understand the importance of individual behavioural processes for mediating evolutionary and ecological diversity.Co-ordinating editor: O. Leimar     

Smaller predator-prey body size ratios in longer food chains

Maximum food-chain length has been correlated with resource availability, ecosystem size, environmental stability and colonization history. Some of these correlations may result from environmental effects on predator-prey body size ratios. We investigate relationships between maximum food-chain length, predator-prey mass ratios, primary production and environmental stability in marine food webs with a natural history of community assembly. Our analyses provide empirical evidence that smaller mean predator-prey body size ratios are characteristic of more stable environments and that food chains are longer when mean predator-prey body size ratios are small. We conclude that environmental effects on predator-prey body size ratios contribute to observed differences in maximum food-chain length.     

Chemical information transfer in freshwater plankton

The structure of aquatic ecosystems is determined by complex interactions among individual organisms at different trophic levels. Although our basic understanding of how top-down and bottom-up processes interact to determine food-web dynamics has advanced, we still lack insights into how complex interactions and feedbacks affect the dynamics and structure of food webs. It is now becoming increasingly clear that, in addition to energy transfer from one trophic level to the other, there is exchange of information between these levels facilitated by the release of infochemicals by the organisms. There is evidence from recent studies that the exchange of chemical information in freshwater ecosystems is likely to play a decisive role in shaping structure and functioning of these systems. Chemical communication among freshwater organisms mediates many aspects of both predation and interspecific competition, which play key roles in determining community structure and ecosystem functioning. For example, consumer-induced defences in phytoplankton and zooplankton include modifications in the characteristics relating to life history, behaviour, morphology and biochemistry. These inducible defences affect trophic interactions by altering predator feeding rates through changes in attack rate or handling time, or both. Also host-specific fungal parasitism in phytoplankton is probably controlled by infochemicals. The motile fungi recognise their host by host-secreted compounds. Until now models describing the functioning of ecosystems mainly considered flows of biomass and energy. Integration of new knowledge about the role of chemical communication in these models may be one of the aims of ecological informatics. In this chapter I discuss how infochemicals may affect the dynamics and structure of planktonic food webs.     

Distinct patterns of soil bacterial and fungal community assemblages in subtropical forest ecosystems under warming

Climate change globally affects soil microbial community assembly across ecosystems. However, little is known about the impact of warming on the structure of soil microbial communities or underlying mechanisms that shape microbial community composition in subtropical forest ecosystems. To address this gap, we utilized natural variation in temperature via an altitudinal gradient to simulate ecosystem warming. After 6 years, microbial co-occurrence network complexity increased with warming, and changes in their taxonomic composition were asynchronous, likely due to contrasting community assembly processes. We found that while stochastic processes were drivers of bacterial community composition, warming led to a shift from stochastic to deterministic drivers in dry season. Structural equation modelling highlighted that soil temperature and water content positively influenced soil microbial communities during dry season and negatively during wet season. These results facilitate our understanding of the response of soil microbial communities to climate warming and may improve predictions of ecosystem function of soil microbes in subtropical forests.     

Environmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems

Assessing how natural environmental drivers affect biodiversity underpins our understanding of the relationships between complex biotic and ecological factors in natural ecosystems. Of all ecosystems, anthropogenically important estuaries represent a ‘melting pot'' of environmental stressors, typified by extreme salinity variations and associated biological complexity. Although existing models attempt to predict macroorganismal diversity over estuarine salinity gradients, attempts to model microbial biodiversity are limited for eukaryotes. Although diatoms commonly feature as bioindicator species, additional microbial eukaryotes represent a huge resource for assessing ecosystem health. Of these, meiofaunal communities may represent the optimal compromise between functional diversity that can be assessed using morphology and phenotype–environment interactions as compared with smaller life fractions. Here, using 454 Roche sequencing of the 18S nSSU barcode we investigate which of the local natural drivers are most strongly associated with microbial metazoan and sampled protist diversity across the full salinity gradient of the estuarine ecosystem. In order to investigate potential variation at the ecosystem scale, we compare two geographically proximate estuaries (Thames and Mersey, UK) with contrasting histories of anthropogenic stress. The data show that although community turnover is likely to be predictable, taxa are likely to respond to different environmental drivers and, in particular, hydrodynamics, salinity range and granulometry, according to varied life-history characteristics. At the ecosystem level, communities exhibited patterns of estuary-specific similarity within different salinity range habitats, highlighting the environmental sequencing biomonitoring potential of meiofauna, dispersal effects or both.     

Structural Degradation in Mediterranean Sea Food Webs: Testing Ecological Hypotheses Using Stochastic and Mass-Balance Modelling

Human-mediated disturbances such as fishing, habitat modification, and pollution have resulted in significant shifts in species composition and abundance in marine ecosystems which translate into degradation of food-web structure. Here, we used a comparative ecological modelling approach and data from two food webs (North-Central Adriatic and South Catalan Sea) and two time periods (mid-late 1970s and 1990s) in the Mediterranean Sea to evaluate how changes in species composition and biomass have affected food-web properties and the extent of ecosystem degradation. We assembled species lists and ecological information for both regions and time periods into stochastic structural and mass-balance food-web models, and compared the outcomes of 22 food-web properties. Our results show strong similarities in structural food-web properties between the North-Central Adriatic and South Catalan Seas indicating similar ecosystem structure and levels of ecological degradation between regions and time periods. In contrast, a comparison with other published marine food webs (Caribbean, Benguela, and US continental shelf) suggested that Mediterranean webs are in an advanced state of ecological degradation. This was reflected by lower trophic height, linkage density, connectance, omnivory, species involved in looping, trophic chain length and fraction of biomass at higher trophic levels, as well as higher generality and fraction of biomass at lower trophic levels. An analysis of robustness to simulated species extinction revealed lower robustness to species removals in Mediterranean webs and corroborated their advanced state of degradation. Importantly, the two modelling approaches used delivered comparable results suggesting that they both capture fundamental information about how food webs are structured. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Ecological effects of river ice break-up: a review and perspective

1. Abiotic disturbances strongly modify spatial and temporal patterns of lotic ecosystem community structure and function. Such effects are produced because disturbances alter organic matter, nutrient and contaminant dynamics and the distribution and abundance of bacterial, algal, macroinvertebrate and fish communities. 2. River ice break-up is a seasonal disturbance in rivers at high altitudes and latitudes world-wide and is characterized, in part, by large increases in current velocity, stage, water temperature, concentrations of suspended materials and substrate scouring. 3. These abiotic factors are likely to have important effects on primary producers, consumers, and food-web dynamics of river biota. Despite the potential importance of river ice break-up on community structure and function, detailed information describing the magnitude of their effects and underlying causal mechanisms is scarce. 4. The objective of this paper is to provide a hydrological and ecological review and perspective on the potential effects of ice break-up on lotic ecosystems. Specifically, the potential importance of break-up on water temperature, river sediments and geomorphology, riverine energy sources, contaminants, and its effects on river biota and food-web dynamics are evaluated.     

Community genetics: what have we accomplished and where should we be going?

Research in community genetics seeks to understand how the dynamic interplay between ecology and evolution shapes simple and complex communities and ecosystems. A community genetics perspective, however, may not be necessary or informative for all studies and systems. To better understand when and how intraspecific genetic variation and microevolution are important in community and ecosystem ecology, we suggest future research should focus on three areas: (i) determining the relative importance of intraspecific genetic variation compared with other ecological factors in mediating community and ecosystem properties; (ii) understanding the importance of microevolution in shaping ecological dynamics in multi-trophic communities; and (iii) deciphering the phenotypic and associated genetic mechanisms that drive community and ecosystem processes. Here, we identify key areas of research that will increase our understanding of the ecology and evolution of complex communities but that are currently missing in community genetics. We then suggest experiments designed to meet these current gaps.     

Environmental determinants of food-chain length: a meta-analysis

Food-chain length is an important character of ecological communities that affects many of their functional aspects. Recently, an increasing number of studies have tested the effects of productivity, disturbance, or ecosystem size on food-chain length in a variety of natural systems. Here we conduct a formal meta-analysis to summarize findings from these empirical studies. We found significant positive mean effects of productivity and ecosystem size but no significant mean effect of disturbance on food-chain length. The strength of mean effect sizes was not significantly different between productivity and ecosystem size. These results lend general support to previous theories predicting the effect of productivity and ecosystem size, but fail to support the prediction that disturbance shortens food chains. In addition, our meta-analysis found that the effect sizes of primary studies were significantly heterogeneous for ecosystem size and disturbance, but not for productivity. This pattern might reflect that ecosystem size and disturbance can affect food-chain length through multiple different mechanisms, while productivity influences food-chain length in a simple manner through energy limitation.     

跨越生境的资源补贴对生态系统的影响研究进展

跨越不同生态系统之间的物质、能量和营养元素流动,即资源补贴,是生态系统的基本属性,也是生态学研究的基本问题之一.常见的资源补贴包括落入水体的树叶凋落物和陆地昆虫、水生昆虫成虫、从海洋生殖洄游的鲑鱼等,这些外源性的资源补贴对接收生态系统的生物个体、种群、群落、生物多样性和生态系统功能都有影响,包括促进个体生长、增加物种丰度和多样性、改变群落结构、增加生态系统的生产力、改变食物链长度及影响食物网、影响生态系统的稳定性等.随着未来人类活动对环境扰动的增加,尤其在土地利用、气候变化、生物入侵方面,对跨越生态系统资源补贴的时空动态影响将加剧,因而生态系统将面临更加严峻的威胁.鉴于此,未来在该领域的基础研究应着重开展以下几方面研究:单一和多重环境胁迫对资源补贴和生态系统的影响;动态资源补贴在生态系统修复及管理中的应用;关注与污染物相关的资源补贴的负面影响;加强跨越生境资源补贴在热带和亚热带以及在我国的生态学基础研究.     

Ontogenetic niche shift, food-web coupling, and alternative stable states

Several recent studies have shown that food web coupling by ontogenetic niche shifts can generate alternative stable states (ASS). However, these studies mainly considered cases where juvenile and adult stages are the top level consumers. The conditions under which ASS occur in more structurally diverse food web configurations have not been explored. In this study, I examine the influence of food-chain length and the trophic positions of juveniles and adults on the existence of ASS. Comprehensive model analysis showed that if both juveniles and adults are top predators, ASS are possible irrespective of their trophic level, because of overcompensation in reproduction and maturation due to strong density dependence, as previously predicted. However, the following potential food-web effects were found: ASS potential (1) disappears if either or both the juveniles and adults have a predator and (2) is once again observed if another predator is added on the stage-specific predator. These mechanisms involve (1) top–down control that relaxes intrastage food competition and (2) top–down cascade that intensifies the intrastage competition, respectively. Furthermore, it was illustrated that the environmental conditions under which ASS occurred varied in complex ways with the coupled food-web configurations. My results provide a novel concept that anthropogenic changes in local community structure (e.g., species extinction and invasion) propagate through space and may cause or prevent regime shifts in broad-scale community structure by altering the resilience to environmental perturbations.