Isolation of Cellulose-Degrading Thermoanaerobacterium Strains from Thermophilic Methanogenic Microbial Communities

Microbiology - The cultures assigned to the genus Thermoanaerobacterium according to the partial sequencing of the 16S rRNA gene were isolated on CM3 and GS2 media at 55°С from two...     

小麦胚芽鞘扩展蛋白特性及对水分胁迫的响应

扩展蛋白是植物细胞壁延伸过程中的关键调节因子,在植物的生长发育以及对逆境的响应过程中起着重要作用。本文选用小麦(HF 9703)胚芽鞘为材料,采用Hepes法和SDS法分别提取小麦胚芽鞘扩展蛋白,通过改良的植物组织伸长测定仪测定其活性,并利用扩展蛋白抗体进行免疫印迹以检测其丰度,主要研究了小麦胚芽鞘扩展蛋白的特性及对水分胁迫的响应。结果表明:Hepes法提取的扩展蛋白活性较高,而SDS法的提取效率高;离体小麦胚芽鞘扩展蛋白的活性具有pH依赖性,且随缓冲液的交替更换(pH 4.5:pH 6.8)而反复逆转;扩展蛋白主要定位于细胞壁中;小麦胚芽鞘扩展蛋白和黄瓜下胚轴扩展蛋白具有交叉重组活性,但这种活性具有种属特异性。水分胁迫诱导小麦胚芽鞘扩展蛋白的活性和丰度提高,扩展蛋白活性的提高在小麦对水分胁迫的抗性方面可能具有重要作用。     

Comparison of Various Brands of Membrane Filters for Their Ability to Recover Fungi from Water

Five brands of ethylene oxide- and autoclave-sterilized membrane filters were examined for their ability to recover fungi from natural waters. Results showed that the recovery on Gelman membranes was consistently higher than on the other brands tested.     

红曲菌的色素与产生菌

介绍了红曲菌所产各种色素及其衍生物的化学结构和产生菌研究进展,以及红曲菌色素作为食品添加剂及防腐功能,活血、调节血脂、降血压及治疗胺血症等临床药效的原理。着重报道了作者筛选出的紫色红曲菌MonascuspurpureusNH4产生红斑素、红曲红素的培养条件,色素的提取及所产色素的理化特性。     

水分胁迫对燕麦穗颖渗透调节和抗氧化能力的影响

以抗旱性不同的燕麦品种‘蒙燕1号’(抗旱性强)和‘坝莜3号’(水分敏感)为试验材料,采用盆栽方式研究了抽穗期和灌浆期水分胁迫对燕麦穗颖渗透调节和抗氧化能力的影响。结果表明:(1)水分胁迫处理均显著促进了不同抗旱性品种穗颖渗透调节物质(游离脯氨酸和可溶性蛋白)含量增加,并以抗旱品种累积水平高于水敏感品种,且两种渗透调节物质对抽穗期胁迫的反应比灌浆期胁迫更敏感。(2)两时期的水分胁迫处理均能降低不同抗旱性品种穗颖SOD和POD活性,抗旱品种的保护酶活性要高于水敏感品种,抗旱品种的SOD活性降低幅度明显低于水敏感品种,而POD活性降低幅度在两品种间差异不明显。(3)水分胁迫导致2个品种穗颖丙二醛(MDA)含量和相对电导率显著增加,细胞膜结构受到严重伤害,且水敏感品种受害程度大于抗旱品种。(4)水分胁迫使2个品种单株籽粒产量下降,且在中度胁迫和重度胁迫下,抗旱品种的减产幅度要低于同期水敏感品种;水分胁迫下,水敏感品种‘坝莜3号’减产4.54%~30.29%,抗旱品种‘蒙燕1号’减产6.69%~23.54%。可见,抗旱性强的燕麦品种在受到水分胁迫的条件下能通过增强穗颖渗透调节和抗膜质过氧化能力、减弱穗颖细胞质膜损伤程度来适应干旱胁迫,最大限度减少水分胁迫对穗颖的伤害,有利于稳产。     

Plant Responses to Water Stress

This Special Issue comprises a series of papers that developsthe theme of plant responses to water stress, encompassing recentdevelopments at the molecular level, through responses of photosynthesisand metabolism, to their application in crop selection and yield.The consideration of water deficits is particularly timely,given the huge developments in this area in the past decade.This issue specifically sets out to place molecular and physiologicalprocesses and their agronomic applications in an environmentalcontext.     

The Effect of Soil Water and Aeration on Seed Germination

The time rate of germination and the final germination percentageof Oryzopsis holciformis decreased with increasing water stress.The optimum matric potential for germination was–0.005bar in coarse sand and –0.5 bar in sandy loam soil. Thisdiscrepancy was explained by changes in the rate of water-supplyto the seed, as determined by the area of contact between seedand germination medium, and by the hydraulic conductivity ofthe medium. At high soil moisture potentials germination also decreased.Such a decrease was not found at equivalent osmotic potentials.It seems that this decrease in germination was brought aboutby the thickening of the water films around the seeds, whichinterfered with oxygen diffusion. This assumption was supportedby determinations with Pt electrodes, and by previous work ongermination at lowered oxygen concentrations.     

SMN Deficiency Reduces Cellular Ability to Form Stress Granules,Sensitizing Cells to Stress

Spinal Muscular Atrophy (SMA) is a neurodegenerative disease that is caused by deletion of the SMN (Survival of Motor Neuron) gene. The SMN protein is essential for cell survival and co-localized with TIA-1/R and G3BP, two characteristic markers of stress granules (SGs). To further study the SMN function in stress granules and in response to stress, we generated stable cell lines with SMN knockdown. Our data indicate that suppression of SMN drastically reduces cellular ability to form stress granules in response to stress treatment. In addition, we show that SMN deficiency sensitizes cells to sodium arsenite and H₂O₂, two well-known stress inducers, leading to cell death at a much lower concentration of inducers in SMN knockdown cells than in control cells. Interestingly, the cell death is correlated with formation of stress granules, suggesting that involvement of SMN in formation of stress granules may play an important role in cell survival. Furthermore, rescue of SGs formation by overexpression of G3BP can reverse the defective formation of stress granules and results in partial abrogation of cell death against SMN deficiency. We deduce that modulation of stress response may be useful for potential SMN treatment.     

Ribotyping of Erwinia chrysanthemi Strains in Relation to Their Pathogenic and Geographic Distribution

16S and 23S rRNAs from Escherichia coli were used to study the relationship among a representative collection of strains of Erwinia chrysanthemi differing in their original host and geographical origin. Phenetic analysis of restriction fragment length polymorphisms allowed the distribution of the studied strains into seven clusters. These clusters were similar to those obtained by cladistic methods and appeared to correlate well with the established pathovars and biovars but to a lesser extent with geographical distribution. Except for two groups of strains defined as tropical and temperate isolates (clusters 3 and 4, respectively), our clustering correlated well with botanical classifications of host plants. However, the rRNA groupings were shown to be more discriminative than biovar analysis. To assess the relationship between rRNA clusters and pathogenicity, 12 representative strains from different clusters were tested for pathogenicity on different plants. The two typical symptoms, maceration and wilting, were observed for these strains. The occurrence of the tobacco hypersensitivity reaction for a subset of these strains is discussed in light of recent results concerning the presence of an hrp gene. Considering symptom expression only, rather than the capacity for plant infection, strains from the same cluster were shown to induce similar symptoms in test plants. Thus, since host specificity is still quite controversial, rRNA patterns may constitute a useful tool in taxonomic and epidemiological studies of Erwinia chrysanthemi species.     

Regression-Based Ranking of Pathogen Strains with Respect to Their Contribution to Natural Epidemics

Genetic variation in pathogen populations may be an important factor driving heterogeneity in disease dynamics within their host populations. However, to date, we understand poorly how genetic diversity in diseases impact on epidemiological dynamics because data and tools required to answer this questions are lacking. Here, we combine pathogen genetic data with epidemiological monitoring of disease progression, and introduce a statistical exploratory method to investigate differences among pathogen strains in their performance in the field. The method exploits epidemiological data providing a measure of disease progress in time and space, and genetic data indicating the relative spatial patterns of the sampled pathogen strains. Applying this method allows to assign ranks to the pathogen strains with respect to their contributions to natural epidemics and to assess the significance of the ranking. This method was first tested on simulated data, including data obtained from an original, stochastic, multi-strain epidemic model. It was then applied to epidemiological and genetic data collected during one natural epidemic of powdery mildew occurring in its wild host population. Based on the simulation study, we conclude that the method can achieve its aim of ranking pathogen strains if the sampling effort is sufficient. For powdery mildew data, the method indicated that one of the sampled strains tends to have a higher fitness than the four other sampled strains, highlighting the importance of strain diversity for disease dynamics. Our approach allowing the comparison of pathogen strains in natural epidemic is complementary to the classical practice of using experimental infections in controlled conditions to estimate fitness of different pathogen strains. Our statistical tool, implemented in the R package StrainRanking, is mainly based on regression and does not rely on mechanistic assumptions on the pathogen dynamics. Thus, the method can be applied to a wide range of pathogens.     

Methanogenic Transformation of Methylfurfural Compounds to Furfural

The metabolic conversion of 5-methylfurfural and 2-methylfurfural to furfural by a methanogenic bacterium, Methanococcus sp. strain B, was studied. This bacterium was found to use methylfurfural compounds as a growth substrate and to convert them stoichiometrically to furfural. For every mole of methylfurfurals metabolized, almost 1 mol of furfural and 0.7 mol of methane were produced. Several methanogenic bacteria did not carry out this conversion. The metabolic conversion of methylfurfurals is likely to be of value in the anaerobic treatment of methylfurfural-containing wastewaters such as those produced by the paper and pulp industries and oatmeal processing industries. This study adds to the list of the limited number of compounds that are known to serve as electron donors for methanogenesis.     

变形杆菌的耐药性及接合性R质粒的检测

本文报告了从烧伤病人感染创面分离、鉴定的35株变形杆菌的药敏试验及接合性R质粒的检测结果。35株变形杆菌双测试的6种抗菌药物都具有不同程度的耐药性。其中,对6种药物同时耐受的有26株(74.3％)。对其中的27株做了接合试验,接合性R质粒的检出率为70.4%。     

Adaptation to Water Stress in Wheat

Three experiments were designed to investigate to what extent adaptation to water stress take place. Wheat (Triticum aestivum L. cv. Kolibri) was grown in water culture at constant temperature, air humidity, and light intensity. When the plants were 16 days old, the potential of the root medium (ψ_r) was lowered by 1 bar every second day by means of polyethyleneglycol 1500 down to ?4 or ?7 bar and then remained at these levels. As a control one experiment was grown at ?0.7 bar. By regression it was found that when ψ_r was lowered by I bar, osmotic potential in leaf (ψ_π) decreased 1.46 bar, and leaf water potential (ψ_t) 0.68 bar, which mean an increase of turgor of 0.78 bar. At the same time the leaf water content did fall 0.30 g per g dry matter. Specific transpiration rate increased significantly after ψ_r was kept constant, but the increase in area of fresh leaves was strongly reduced due to wilting of old leaves. After an “adaptation” period during which ψ_r remained at ?0.7, ?4, and ?7 bar, respectively, for at least 1 week. ψ_r was altered so as to cover the range from 0 to ?14 bar and ψ_π, ψ_r, transpiration and diffusion resistance in stomata (r_s) were measured. The levels of ψ_π and ψ₁ were lower (more negative) and turgor potential higher in plants grown at low ψ_r. The transpiration in pre-stressed plants showed less sensitivity to the alteration of ψ_r than in the non-stressed plants. The values of ψ_r at which r_s increased greatly, were found to be about ?13, ?15, and ?18 bar for plants grown at ?0.7, ?4, and ?7 bar, respectively.     

Response of Tea Plants to Water Stress

Two-year-old potted plants of six Camellia sinensis cultivars (TV-18, TV-26, UPASI-3, UPASI-26, T-78 and HV-39) were subjected to water stress for 4, 8 and 12 d. Relative water content (RWC) of leaves of all cultivars declined with water stress, but in the two drought tolerant cultivars (UPASI-3 and UPASI-26), higher RWC were maintained in comparison to the others. Phenol content and activities of phenylalanineammonialyase, polyphenoloxidase and peroxidase initially increased, but decreased during extended drought. Chlorophyll contents decreased, whereas proline contents increased during water stress. SDS-PAGE analysis of proteins revealed increased accumulation of proteins of intermediate molecular masses (42 – 44 kDa) and low molecular masses (14 – 26 kDa). After 12 d of water stress, most of these proteins disappeared in T-78 and HV-39, but in the other cultivars they were still detectable.     

Screening of Probiotic Activities of Forty-Seven Strains of Lactobacillus spp. by In Vitro Techniques and Evaluation of the Colonization Ability of Five Selected Strains in Humans

The probiotic potential of 47 selected strains of Lactobacillus spp. was investigated. The strains were examined for resistance to pH 2.5 and 0.3% oxgall, adhesion to Caco-2 cells, and antimicrobial activities against enteric pathogenic bacteria in model systems. From the results obtained in vitro, five strains, Lactobacillus rhamnosus 19070-2, L. reuteri DSM 12246, L. rhamnosus LGG, L. delbrueckii subsp. lactis CHCC 2329, and L. casei subsp. alactus CHCC 3137, were selected for in vivo studies. The daily consumption by 12 healthy volunteers of two doses of 10¹⁰ freeze-dried bacteria of the selected strains for 18 days was followed by a washout period of 17 days. Fecal samples were taken at days 0 and 18 and during the washout period at days 5 and 11. Lactobacillus isolates were initially identified by API 50CHL and internal transcribed spacer PCR, and their identities were confirmed by restriction enzyme analysis in combination with pulsed-field gel electrophoresis. Among the tested strains, L. rhamnosus 19070-2, L. reuteri DSM 12246, and L. rhamnosus LGG were identified most frequently in fecal samples; they were found in 10, 8, and 7 of the 12 samples tested during the intervention period, respectively, whereas reisolations were less frequent in the washout period. The bacteria were reisolated in concentrations from 10⁵ to 10⁸ cells/g of feces. Survival and reisolation of the bacteria in vivo appeared to be linked to pH tolerance, adhesion, and antimicrobial properties in vitro.     

Soil Salinity and Water Stress and Their Effect on Susceptibility to Verticillium Wilt Disease, Ion Composition and Growth of Pistachio

The effects of soil salinity and water stress on Verticillium wilt, ion composition and growth of pistachio were studied in a greenhouse experiment (18–32°C). Treatments consisted of three levels of salinity (0, 1200 and 2400 mg NaCl/kg soil), three levels of water stress (3, 7 and 14 day irrigation regimes) and two Pistachio cultivars (Sarakhs and Qazvini, common rootstocks in Iran). Infested soil containing 50 microsclerotia/g of a pistachio isolate of Verticillium dahliae was used for all treatments and non‐infested soils were used as control. The experiment was arranged in a completely randomized design with three replications. Eight‐week‐old pistachio seedlings were transferred to infested and non‐infested soil and then exposed to salt stress and thereafter water stress. Shoot dry weights of both rootstocks were reduced significantly with increasing NaCl levels; however, increasing irrigation regimes reduced salt injury. Salt stress significantly increased shoot and root colonization by V. dahliae in both cultivars. Moreover, increasing of salinity level was positively correlated with increasing concentrations of Na⁺, K⁺ and Cl^? in both cultivars, but negatively correlated with increasing irrigation regimes. Based on these results, Sarakhs and Qazvini were found to be sensitive and tolerant to the effect of irrigation regimes, salinity and Verticillium wilt disease, respectively. Although there were no interactive effects of irrigation and salinity on V. dahliae infection.     

Response of Melanthera biflora to Salinity and Water Stress

Melanthera biflora (Asteraceae) is a moderately salt-tolerantplant from the Indo-Pacific region. In laboratory studies itsgrowth was inhibited by salt above 50 mol m^–3, but itwas able to survive salinities approaching that of seawater,namely 400 mol m^–3. Shoot potassium concentrations weremaintained over a range of salinities up to 400 mol m^–3,while sodium and chloride accumulation followed closely theincrease in external osmotic pressure. In contrast, the increasein osmotic pressure of the leaf sap of Melanthera biflora, subjectedto water stress, was due mainly to a decrease in the ratio offresh weight/dry weight. 3-dimethylsulphoniopropionate (3-DMSP)and glycinebetaine were identified by fast atom bombardmentmass and ¹H -NMR spectroscopy, with 3-DMSP being the main oniumcompound and glycinebetaine absent in some accessions. Onium(quaternary ammonium and/or tertiary sulphonium) compounds andproline increased during salt and water stress due mainly toa decrease in the fresh weight/dry weight ratio of tissue, althoughpart of the increase in salt-stressed tissue was due to an increasein the accumulation of the onium compound. This salt-inducedincrease in 3-DMSP was inhibited in conditions of low sulphursupply and there was no compensatory increase in proline. Key words: Melanthera biflora, Asteraceae, salinity, glycinebetaine, 3-dimethylsulphonioproprionate     

高粱苗对干旱的反应和调节适应能力

本实验在人工气候室的人工光照室内进行。利用不同低渗透势的培养液模拟土壤干旱条件,观察较抗旱的高粱品种“晋杂5号”在此条件下的生长、生理和代谢的变化。实验表明植株水势、脯氨酸量,总游离氨态氮量在外界渗透势为–2.5巴时就会发生显著变化,鲜重和相对透性在–5.0巴时开始发生显著变化;而干重则在–10.0巴时才发生明显变化。对于干旱的变化敏感性顺序为水势、脯氨酸量,总游离氨态氮量>相对透性、鲜重>干重。表明干旱首先引起植物水分状况和某些代谢过程的变化,最后才是干物质的积累。“晋杂5号”幼苗在干旱条件下具有一定的调节适应能力,表现在渐进干旱处理时受到的抑制小于同样程度的突然干旱处理。另外,在一定的干旱范围内随时间延长,生长、生理代谢变化,有趋于缓和或恢复的趋势。本文分析并讨论了脯氨酸含量的对数(log PRO),相对透性的对数(log RP),鲜重和干重的日相对生长率(RGR)和植株水势(φ)之间的关系。     

几株啤酒酵母的筛选及发酵性能比较*

啤酒酵母是啤酒酿造的灵魂,可以直接影响啤酒品质。在啤酒酿造过程中,由于啤酒酵母被多次传代和保藏,造成优良菌种发酵性能衰退等问题,导致发酵不彻底,影响最后啤酒的风味质量。为此以8株Lager型啤酒酵母为出发菌株,通过平板分离纯化获得80株分离菌株,再经过三角瓶发酵初筛和复筛、发酵罐中试发酵实验最终获得了8株发酵性能优良的啤酒酵母。其中,6株酵母可应用于酿造双乙酰含量低于0.1 mg/L的啤酒;3株酵母发酵度高于70%,适合酿造干啤酒;1株酵母发酵度低于50%,适合酿造低醇啤酒。在风味方面:1株酵母酿造的啤酒醇酯比为3.3,啤酒酯香味较突出;另1株酵母酿造的啤酒醇酯比为4.5,啤酒高级醇含量较高。8株经过选育的啤酒酵母发酵特征明显,便于精酿啤酒厂实际应用。     

The Neurovirulence of the DA and GDVII Strains of Theiler’s Virus Correlates with Their Ability To Infect Cultured Neurons

The strains of Theiler’s murine encephalomyelitis virus, a picornavirus, are divided into two groups according to their neurovirulence after intracerebral inoculation. The highly virulent GDVII strain causes an acute, fatal encephalomyelitis, whereas the DA strain causes a mild encephalomyelitis followed by a chronic inflammatory demyelinating disease associated with viral persistence. Studies with recombinant viruses showed that the capsid plays the major role in determining these phenotypes. However, the molecular basis for the effect of the capsid on neurovirulence is still unknown. In this paper, we describe a large difference in the patterns of infection of primary neuron cultures by the GDVII and DA strains. Close to 90% of the neurons were infected 12 h after inoculation with the GDVII strain, and the cytopathic effect was complete 24 h postinoculation. In contrast, with the DA strain, viral antigens were not detected in neurons until 24 h postinoculation. Infected neurons accounted for only 2% of the total number of neurons, even 6 days after inoculation. No cytopathic effect was visible, and the cultures could be kept for the same length of time as the noninfected controls. Because the neurovirulence of the GDVII strain has been mapped to the capsid, we examined the role of the capsid in this difference of phenotype. We showed, using recombinant viruses, that the capsid was indeed responsible for the pattern of infection observed in vitro, most likely through its role in viral entry. Thus, the levels of neurovirulence of the GDVII and DA strains correlate with their abilities to infect cultured neurons, and this ability is controlled by the capsid.