Entobia exogyrarum (Frič, 1883) from the Upper Cretaceous of the Bohemian Cretaceous Basin

The validity of the little-known ichnospecies Entobia exogyrarum (Fri?) is verified. Shells of an oyster, Rhynchostreon suborbiculatum (Lam.), represent the substrate for the sponge borings. The borings occur in many Upper Cenomanian to Middle Turonian localities of the Bohemian Cretaceous Basin. This study revealed that the sponges attacked shells of living oysters. Entobia exogyrarum (Fri?) also represents one of the shallowest occurrences of Entobia borings in the Upper Cretaceous rocks.     

Palaeocology of Hard Substrate Faunas from the Cretaceous Qahlah Formation of the Oman Mountains

Skeletal encrusters and carbonate hardgrounds are rare in siliciclastic sands and gravels because of high levels of abrasion and sediment movement. An exception to this is the Maastrichtian Qahlah Formation of the Oman Mountains, a sequence of coarse siliciclastic sediments deposited on a shallow marine shelf above wavebase and at an equatorial palaeolatitude. This unit contains intercalated carbonate hardgrounds and other hard substrates which were encrusted and bored. The hard substrates, comprising carbonate and silicate clasts, calcareous bioclasts (mollusc shells and coral fragments) and wood, supported a diverse encrusting and boring fauna dominated in biomass by the oyster Acutostrea . There are twelve bryozoan species and at least two serpulid worm species, most living cryptically. Other encrusters on exposed surfaces include the agglutinated foraminiferan Placopsilina and several species of colonial corals. Borings in the carbonate clasts and shells are predominantly those of bivalves ( Gastrochaenolites ), with subsidiary clionid sponge ( Entobia ) and acrothoracican barnacle ( Rogerella ) borings. The woodgrounds are thoroughly bored by teredinid bivalves ( Teredolites ). Of the common substrate types, carbonate hardground clasts support the greatest number of taxa, followed by chert clasts, with limestone rockground pebbles being depauperate. Clast composition and relative stability probably explain these differences. Individual clasts probably had variable and typically long colonisation histories. Detailed palaeoecological interpretation is constrained by taphonomic loss, time-averaging and clast transportation and reorientation. Evidence from the Qahlah Formation shows that tropical rocky-shore biotas in the Cretaceous were not impoverished as previously believed.     

Determination of a Late Miocene rocky palaeoshore by bioerosion trace fossils from the Bozcaada Island, Çanakkale,Turkey

Bioerosion is a common process in hard substrates. This study introduces an example from the rocky palaeoshore cropping out at a sea cliff on the Bozcaada Island. It includes bioerosion trace fossils preserved in limestone boulders of the shallow marine and lacustrine Alcitepe Formation of Late Miocene age. The ichnotaxa include borings produced by duraphagous drillers (Oichnus isp.), phonorids (cf. Conchotrema isp.), clionid sponges (Entobia cf. goniodes, Entobia geometrica, Entobia laquea, Entobia ovula, E. cf. solaris, Entobia isp.), endolithic bivalves (Gastrochaenolites torpedo, Gastrochaenolites lapidicus, Gastrochaenolites isp., Phrixichnus isp.), polychaete annelids (Maeandropolydora isp., Maeandropolydora sulcans, Maeandropolydora decipiens, Caulostrepsis taeniola, Caulostrepsis isp.), echinoids (cf. Circolites isp.) and spinculid worms (cf. Trypanites isp.). Barnacles are also common as encrusters. The borings can be ascribed to the Gastrochaenolites-Entobia assemblage, which is typical of Neogene rocky-shores. They belong to the Entobia ichnofacies indicating various conditions of light, energy, and depth. Therefore they can reveal environmental changes and play an important role in forming palaeo-rocky shores and wave-cut platforms during marine trangressive events.     

Genetic code redundancy and its differential influence on the evolution of protein interiors versus exteriors

The distinctive amino acid compositions of protein exteriors and interiors were compared to the composition bias imposed by genetic code redundancy. It transpired that the synonym allocation is biased more in favour of those residues which are preferred in interiors, and this leads to an average interior residue being more probable and less mutable compared to an exterior residue. The general implications for protein evolution are discussed in association with the known evolutionary behavior of particular protein families. It is suggested that some proteins may have their structural history "fossilised" in their interiors and that the "amino acid" code is in reality a "protein" code.     

Bioerosive structures from Miocene marine mobile‐substrate communities in southern Spain,and description of a new sponge boring

Abstract: Neogene palaeoshore sediments are abundantly represented along the Mediterranean coast of Iberia. An outcrop north of the Sierra Tejeda, named La Resinera, exposes concentrations of pebbles and boulders of marble, comprising an upper Miocene marine beach deposit. The high diversity of bioerosion trace fossils present in these boulders includes structures produced by polychaete annelids, demosponges, echinoids and endolithic bivalves, which indicate a shallow shoreface environment. The ichnotaxa represented are Maeandropolydora sulcans, Caulostrepsis taeniola, Entobia geometrica, Entobia ovula, Circolites kotoncensis, Gastrochaenolites torpedo, Gastrochaenolites lapidicus, Gastrochaenolites ornatus and Gastrochaenolites turbinatus. The borings are Tortonian (late Miocene) in age. Also present, and particularly abundant, are large sponge borings that have a single chamber from which radiating canals emerge. This trace fossil is designated as Entobia resinensis isp. nov.     

Borings in trepostome bryozoans from the Ordovician of Estonia: two ichnogenera produced by a single maker, a case of host morphology control

The evolution of borings has shown that the morphology of borings is a function of both the borer and its substrate. This study investigated the effect of bryozoan internal skeletal morphology on the dimensions and distribution of borings. One hundred and forty-three trepostome colonies from the Middle and Upper Ordovician strata of northern Estonia were examined. Of these, 80% were matrix entombed, longitudinally sectioned ramose and hemispherical colonies, and 20% were matrix-free hemispherical colonies that allowed examination of the colony surfaces. Seventy-one percent of the ramose colonies were bored, whereas 88% of the hemispherical colonies were bored. On average, only 8% of colony surface areas were bored out. Borings were more randomly oriented in the hemispherical colonies. In contrast in the ramose colonies, the borings tended to more restricted to the thin-walled endozone and thus parallel to the branch axis. This is interpreted to be a function of the thick-walled exozones controlling to some extent where the borer could bore. Based on morphology, the borings in the hemispherical colonies are referred to Trypanites and those in the ramose colonies to Sanctum . Sanctum is revised to include two possible openings and to recognize that boring shapes were inherently constrained by the thick-walled exozones of the host bryozoan colonies. Both trace fossils were probably produced by a boring polychaete that used the tubes as domiciles.     

Oichnus Bromley Borings in the Irregular Echinoid Hemipneustes Agassiz from the Type Maastrichtian (Upper Cretaceous,The Netherlands and Belgium)

Three ichnospecies of Oichnus Bromley occur in tests of the large holasteroid echinoid Hemipneustes striatoradiatus (Leske) in the type area of the Maastrichtian (Upper Cretaceous) in The Netherlands and Belgium; Oichnus simplex Bromley (penetrative), Oichnus paraboloides Bromley (nonpenetrative and showing two distinct morphologies), and Oichnus excavatus isp. nov. (nonpenetrative). The two distinct morphologies of O. paraboloides (both shallow, one with a central boss) are gregarious, but do not occur together on the same specimens, suggesting they were generated by different taxa. Oichnus paraboloides with a central boss occurs on H. striatoradiatus from the upper Nekum Member, Maastricht Formation (Maastrichtian, Upper Cretaceous). Tests of the host echinoid are smaller in the overlying Meerssen Member, Maastricht Formation, where they are infested by O. excavatus, the largest borings considered herein, which have concave walls and a large central boss. Blisters inside tests from the Meerssen Member show that this infestation occurred when the echinoid was alive. It is postulated that producers of these borings in H. striatoradiatus may have been genetically related and increased in size during the Maastrichtian even as the host echinoids showed a size decrease. This size increase in H. striatoradiatus was genetic and cannot be related to increase in size of borings.     

Diversity of RuBisCO gene responsible for CO2 fixation in an Antarctic moss pillar

Antarctic “moss pillars” are lake-bottom biocenoses that are primarily comprised of aquatic mosses. The pillars consist of distinct redox-affected sections: oxidative exteriors and reductive interiors. Batteries of SSU rRNA genotypes of eukaryotes, eubacteria, and cyanobacteria, but no archaea, have been identified in these pillars. However, rRNA-based phylogenetic analysis provides limited information on metabolic capabilities. To investigate the microorganisms that have the potential for CO₂ fixation in the pillars, we studied the genetic diversity of ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO, EC 4.1.1.39)—an enzyme involved in CO₂ fixation. PCR clone libraries targeting all forms of the RuBisCO large subunit-encoding gene were constructed and 1,092 clones were randomly sequenced. Phylogenetic analysis indicated that proteobacterial form IA operational RuBisCO units (ORUs) were detected at the same frequency as the cyanobacterial form IB ORUs. Surprisingly, the form IA ORU, which was closely related to the sequences from deep-sea environments, was detected from all moss pillar sections. The form IB ORU related to Bryophyta, considered to be derived from moss, was identical to the sequence of Leptobryum sp. isolated from Lake Hotoke-Ike where the pillars were found. Moreover, certain cyanobacterial ORUs were found exclusively in the exterior of the pillar, whereas form II ORUs related to chemolithoautotrophic sulfur oxidizers and purple sulfur bacteria were found exclusively in the interior. No forms IC, ID, or III RuBisCO genes were detected. This is the first report demonstrating that bacteria with the potential for CO₂ fixation and chemoautotrophy are present in the Antarctic moss pillar ecosystem.     

Tentacular diversity in deep-sea deposit-feeding holothurians: implications for biodiversity in the deep sea

The tentacles of deep-sea holothurians show a wide range of morphological diversity. The present paper examines gross tentacle morphology in surface deposit feeding holothurians from a range of bathymetric depths. Species studied included the elasipods: Oneirophanta mutabilis, Psychropotes longicauda and Benthogone rosea and the aspidochirotids: Paroriza prouhoi, Pseudostichopus sp., Bathyplotes natans and Paroriza pallens. The sympatric abyssal species Oneirophanta mutabilis, Psychropotes longicauda and Pseudostichopus sp. show subtle differences in diet and the structure and filling patterns of the gut that suggest differences in feeding strategies which may represent one mechanism to overcome competition for food resources in an environment where nutrient resources are considered to be, at least periodically, limiting. Interspecific differences in tentacle functional morphology and digestive strategies, which reflects taxonomic diversity could be explained in terms of Sanders'; Stability–Time Hypothesis. Since different tentacle types will turn over sediments to different extents, their impact on sedimentary communities will be enormous so that high diversity in meiofaunal communities may be explained most simply by Dayton and Hessler's Biological Disturbance Hypothesis.     

Two new species of canaliculate rudists (Dictyoptychidae) from southeastern turkey

Two new species of canaliculate rudist genus Dictyoptychus Douvillé: Dictyoptychus quadrizonalis n. sp. and Dictyoptychus vanensis n. sp., are described from the Maastrichtian limestone block of the ophiolitic unit of the Geva?-Van area, southeastern Turkey. The new species are mainly characterized by the complex structure of the canal layer of the lower valve, and also they seem to be most primitive species of Dictyoptychus and transitional between Dictyoptychus Douvillé and its presumed ancestor, Eodictyoptychus Skelton and El-Asa'ad. Many specimens of the Dictyoptychus paronai (Kühn), allows us to first determination of the upper valve shape and to study also of the lower valve canal layer.     

Epi- and endobiontic organisms on Late Jurassic crinoid columns from the Negev Desert, Israel: Implications for co-evolution

Columns of the articulate crinoids Millericrinus and Apiocrinites from the Upper Jurassic (Upper Callovian) Zohar and Matmor formations of the Negev Desert of Israel display abundant encrusting organisms of about ten species, as well as diverse trace fossils produced by endobionts. Pluricolumnals were colonized by epi- and endobiontic organisms both during life and post-mortem. Skeletonized encrusting organisms include abundant ostreid bivalves (which evidently colonized both live and dead crinoid columnals), two types of serpulid worms, encrusting foraminifera, three species of bryozoans, and small encrusting sclerosponges. Several types of borings are present: Trypanites (possibly produced by sipunculids), Gastrochaenolites (crypts of boring lithophagid bivalves), elliptical barnacle? borings, and channel-like annelid? borings. In addition, approximately 16% of the pluricolumnals display circular parabolic embedment pits assignable to the ichnogenus Tremichnus. They are associated with substantial deformation of the containing columnals and were probably the work of host-specific ectoparasitic organisms. Discovery of Tremichnus on Jurassic crinoids extends the range of this trace by almost 100 million years, providing evidence for one of the longest-ranging host-parasite interactions documented thus far (over 200 million years). The relationship of epibionts to the Jurassic crinoids thus ranged from simple utilization of dead hard substrate to probable opportunistic commensalism in forms that colonized the live upright stems, as in some oysters, through host-specific parasitism in the case of Tremichnus.     

Assessing Posidonia oceanica Seedling Substrate Preference: An Experimental Determination of Seedling Anchorage Success in Rocky vs. Sandy Substrates

In the last decades the growing awareness of the ecological importance of seagrass meadows has prompted increasing efforts to protect existing beds and restore degraded habitats. An in-depth knowledge of factors acting as major drivers of propagule settlement and recruitment is required in order to understand patterns of seagrass colonization and recovery and to inform appropriate management and conservation strategies. In this work Posidonia oceanica seedlings were reared for five months in a land-based culture facility under simulated natural hydrodynamic conditions to identify suitable substrates for seedling anchorage. Two main substrate features were investigated: firmness (i.e., sand vs. rock) and complexity (i.e., size of interstitial spaces between rocks). Seedlings were successfully grown in culture tanks, obtaining overall seedling survival of 93%. Anchorage was strongly influenced by substrate firmness and took place only on rocks, where it was as high as 89%. Anchorage occurred through adhesion by sticky root hairs. The minimum force required to dislodge plantlets attached to rocky substrates reached 23.830 N (equivalent to 2.43 kg), which would potentially allow many plantlets to overcome winter storms in the field. The ability of rocky substrates to retain seedlings increased with their complexity. The interstitial spaces between rocks provided appropriate microsites for seedling settlement, as seeds were successfully retained, and a suitable substrate for anchorage was available. In conclusion P. oceanica juveniles showed a clear-cut preference for hard substrates over the sandy one, due to the root system adhesive properties. In particular, firm and complex substrates allowed for propagule early and strong anchorage, enhancing persistence and establishment probabilities. Seedling substrate preference documented here leads to expect a more successful sexual recruitment on hard bottoms compared with soft ones. This feature could have influenced P. oceanica patterns of colonization in past and present time.     

Taxonomy and paleobiogeographic implication of Glabrobournonia Morris and Skelton (Hippuritida,Radiolitidae) from the Late Cretaceous Yigeziya Formation,southwestern Tarim Basin

A re-examination of the specimens that were identified as Biradiolites minor Pojarkova from the late Campanian to early Maastrichtian middle member of the Yigeziya Formation of southwestern Tarim Basin reveals that they should be assigned to the genus Glabrobournonia Morris and Skelton. Glabrobournonia is a genus of radiolitids characterized by indented radial bands, salient ridges on the shell margins and absence of fine ribs on the surface of the right valve. Apart from southwestern Tarim Basin, Glabrobournonia minor (Pojarkova) has also been recorded from the late Campanian of Fergana and Alai basins. The central Asian, late Campanian to early Maastrichtian G. minor differs from the late Campanian to Maastrichtian, eastern Arabian type species Glabrobournonia arabica Morris and Skelton in the flat left valve and an additional fourth ridge on the junction of the dorsal and posterior sides of the right valve. Biradiolites ingens (Des Moulins) could be the direct ancestor of Glabrobournonia. The paleogeographic distribution of Glabrobournonia suggests that this genus dispersed to central Asia from the late Campanian time, becoming widely distributed in the eastern Tethyan region rather than endemic to eastern Arabia. Correspondingly, specimens belonging to Gyropleura yielded from the same bed as G. minor in southwestern Tarim Basin, are similar to the specimens which were attributed to the eastern Arabian Gyropleura sp.; Campanian to early Maastrichtian Osculigera specimens described from the Yigeziya Formation are comparable with those known from the Campanian–Maastrichtian of Iran, Afghanistan and eastern Arabia. The similarity of the rudist assemblages between central Asia and eastern Arabia suggests a faunal connection and affinity between the north and south margins of the eastern Tethyan realm during Campanian to early Maastrichtian times.     

a new ichnogenus for etchings made by cheilostome bryozoans into calcareous substrates

Some encrusting cheilostome bryozoans etch a pattern of small pits into hard calcareous substrates, especially calcitic and aragonitic shells of molluscs. These patterns, herein described as Leptichnus ichnogen. nov., comprise pits which are sub-circular to elongate in cross section and are found in either uniserial ( L. dromeus isp. nov.) or multiserial arrangements ( L. peristroma isp. nov., the type species). Each pit corresponds to the location of a single zooid in the bryozoan colony. The oldest known Leptichnus is Late Cretaceous (Maastrichtian), the trace fossil first becomes common in the Cenozoic, and at least nine modern cheilostome genera produce incipient Leptichnus. Leptichnus can be the only evidence remaining of encrusting cheilostomes following taphonomic or diagenetic loss of their calcareous skeletons. The mechanism by which bryozoans etch into their calcareous substrates is unknown but is almost certain to be chemical and necessitates having windows in the basal walls of the zooids which permit contact with the substratum beneath. Etching may result in better adherence to the substrate, giving protection from abrasion and bioerosion.     

Systematics and taphonomy of an Early Kimmeridgian belemnite fauna from the Mediterranean Tethys (Monte Nerone, Central Apennines, Italy)

About three hundred belemnite rostra were collected from lower Kimmeridgian beds of a structural high sequence cropping out at Mt. Nerone (Central Apennines, Pesaro Province, Italy). The belemnite fauna is composed mainly of new species. Nine species were recognised, ascribed to five genera, that include Hibolithes semisulcatus M?NSTER, 1830; H. pignattii nov. sp.; Acutibelus sp. cf. acuariformis RIEGRAF, 1981; Belemnopsis neronensis nov. sp., Duvalia matteuccii nov. sp., D. nicosiai nov. sp., D. pallinii nov. sp., D. raymondi nov. sp. and Rhopaloteuthis massimoi nov. sp.; moreover a single specimen is treated in open nomenclature as Belemnopseidae incertae sedis. The stratigraphic and palaeobiogeographic significance of the new fauna is discussed. The taphonomy of the belemnite-rich level is described, with reference to borings found on the belemnite rostra.     

Clypeasteroid echinoid tests as benthic islands for gastrochaenid bivalve colonization: evidence from the Middle Miocene of Tarragona,north‐east Spain

Abstract: Middle Miocene tests of Clypeaster from L’Arrabassada (Tarragona, north‐east Spain) show evidence of intense endoskeletozoan colonization, preserved as borings and associated carbonate secretions that allow gastrochaenid bivalves to be identified as the colonizers. Two modes of occurrence have been recognized for these bivalve dwelling cavities; ‘intrastereom clavate borings’ which are restricted to the echinoid stereom, and ‘semi‐endoskeletal dwellings’, which penetrate across the test wall and extend as carbonate crypts into the sediment fill of the internal test cavity. Their size, density and position rule out a syn‐vivo relationship with the echinoids and demonstrate that colonization was post mortem. Because of the endurance of clypeasteroid skeleton and the pronounced bell‐shaped morphology of Clypeaster, the tests of these echinoids provided the most suitable substrates for hard‐bottom colonizers on an otherwise sandy seafloor. The scenario described from Tarragona can be extended to other Neogene and Quaternary strata elsewhere; there is ample evidence for the long‐term utilization of tests of Clypeaster by gastrochaenid bivalves in shoreface palaeoenvironments.     

Taphonomic signatures on modern molluscs and corals from Red Sea coast,southern Saudi Arabia

Bioeroded gastropod, bivalve and coral specimens (n = 570) were collected from the Jazan area, Saudi Red Sea coast, from which 22 ichnospecies of 8 ichnogenera were identified and illustrated. These traces were produced by clionid sponges (Entobia geometrica, E. ovula, E. cf. goniodes, E. cretacea, E. laquea, E. cf. paradoxa and E. isp.), duraphagous drillers (Oichnus ovalis, O. paraboloides, O. simplex and O. isp.), endolithic bivalves (Gastrochaenolites cf. dijugus, G. lapidicus, G. torpedo and G. isp.), polychaete annelids (Caulostrepsis taeniola, C. isp., Maeandropolydora sulcans, M. isp. and ?Trypanites isp.), acorn barnacles (Rogerella isp.), and vermetid gastropods (Renichnus isp.). The seashells act as hard substrate for colonization by serpulid worm, bivalves, bryozoans, and barnacles. Ichnogenus Entobia was most abundant (56.1%), followed by Gastrochaenolites (25.4%), Caulostrepsis (5.3%), Trypanites (4.2%), Maeandropolydora (3.2%), Oichnus (2.8%), Renichnus (1.9%), and Rogerella (1.0%). Oichnus occurred on the thin-shelled and smooth molluscs, while most Gastrochaenolites borings were found in the larger and thicker seashells as a suitable substrate for the settlement of polychaetes, lithophages, naticids, mytilids, and vermetids. Presence of annelid traces among radial ribs and at the siphonal areas of bivalves is indicative of nutrient capturing from water flow during the lifetime of these bivalves, within a shallow, high energy marine environment, where disarticulation, fragmentation, and abrasion of the seashells were abundantly observed.     

Predatory borings in the inarticulate brachiopod Artiotreta from the Silurian of Oklahoma

A sample containing inarticulate acrotretid brachiopods, from the Silurian Clarita Formation of Oklahoma, was studied to determine the occurrence, nature and frequency of boring in the shells, and the possible identity of the boring organism. Specimens of Artiotreta parva Ireland, 1961 are abundant and specimens of Opsiconidion n. sp. and Acrotretella siluriana Ireland, 1961 are rare in the samples studied. All of the borings discovered are in A. parva except for one, which is in a specimen of O. n. sp. The boreholes are considered to be of predatory origin, and are similar in morphology to borings made by Recent gastropods. The small countersunk boreholes are equally frequent on pedicle and brachial valves, but preferentially located in particular regions of each valve. Boring frequency is high. The identity of the boring organism has not been determined, but is considered to be a soft bodied predator or an archaeo-gastropod.     

Description of a new species,Globotruncana pseudoconica and remarks on its relation to Globotruncana conicaWhite and Globotruncana falsostuartiSigal

A new, strongly spiroconvex Globotruncana species,Globotruncana pseudoconica nov. sp., is described from the Maastrichtian of Tunisia. It is distinguished from Globotruncana conicaWhite in morphology and phylogeny. Some Maastrichtian, strongly spiroconvex specimens referred to as Globotruncana conicaWhite, are shown to be identical to Globotruncana pseudoconica nov. sp. The new species reveals close affinity with Globotruncana falsostuartiSigal from which it has evolved during the middle Lower Maastrichtian.