A revision of <Emphasis Type="Italic">Anisochilus</Emphasis> Wall. ex Benth. (Lamiaceae)

Summary  Sixteen species of Anisochilus are reviewed. Full synonymy, information about types, distributions, and a key to species are given. The type of the little known A. adenanthus Dalzell has been found and the widely used A. verticillatus is a synonym. A. sericeus and A. dysophylloides var. purpureus are synonyms of A. dysophylloides. A. henryi, a recently published name is a synonym of A. robustus. Nine names are lectotypified. The genus occurs in South Asia, from the East Himalaya, North Thailand, and South China in the North to Sri Lanka and Peninsular Thailand in the South.     

<Emphasis Type="Italic">Agave manantlanicola</Emphasis> (Agavaceae), a new species from western Mexico

Agave manantlanicola, a new endemic species from the high altitude mountains of the Sierra de Manantlán in western Mexico, is described and illustrated. The species belongs to the subgenus Littaea and Gentry’s Amolae group. The new species is compared to other morphologically similar species from western Mexico, including Agave attenuata subsp. attenuata, A. attenuata subsp. dentata, A. bakeri, A. chazaroi, and A. vazquezgarciae. Information about its distribution, habitat, and conservation status is included.     

Genetic Divergence in the <Emphasis Type="Italic">cacophony</Emphasis> IVS6 Intron Among Five BrazilianPopulations of <Emphasis Type="Italic">Lutzomyia longipalpis</Emphasis>

Genes involved in the reproductive isolation are particularly useful as molecular markers in speciation studies. Lutzomyia longipalpis (Diptera: Psychodidae: Phlebotominae), a putative species complex, is a vector of visceral leishmaniasis in Latin America. We isolated from this species a fragment homologous to cacophony, a Drosophila gene that encodes features of the lovesong, an acoustic signal that is important in the sexual isolation of closely related species and known to vary considerably among L. longipalpis putative siblings species. Using an intron of the sandfly cacophony as a marker, we analyzed the molecular variation and sequence divergence among five populations of L. longipalpis from Brazil, three allopatric (Jacobina, Lapinha and Natal) and two putative sympatric sibling species from the locality of Sobral. A high level of polymorphism was found and analysis of the data indicates that very little gene flow is occurring among the populations of Jacobina, Lapinha, and Natal. A high level of differentiation was also observed between the two putative sympatric species of Sobral, one of which seems to be the same sibling species found in Natal, while the other is somewhat more related to Jacobina and Lapinha. However, the amount of estimated gene flow among the Sobral siblings is about seven times higher than the previously estimated for period, another lovesong gene, perhaps indicating that introgression might be affecting cacophony more than period. The results suggest that L. longipalpis is not a single species in Brazil, but it is yet not clear whether the different populations studied deserve species status rather than representing an incipient speciation process.     

Three new species,a new combination,and a neotypification in <Emphasis Type="Italic">Dahlstedtia</Emphasis> (Leguminosae,Millettieae, Papilionoideae) from South America

Three new species of Dahlstedtia, D. burkartii, D. dehiscens, and D. lewisiana, are described from South America, and their relationships with related species are discussed. Dahlstedtia burkartii, from Argentina, has pink flowers with standard straight, whereas D. dehiscens and D. lewisiana, both from Brazil, have purplish to lilac flowers with a reflexed standard petal. A new combination, Dahlstedtia peckoltii, is proposed based on Lonchocarpus peckoltii and a neotype is selected for the latter. Information about geographic distribution and phenology of the species is provided.     

Novel molecular markers of <Emphasis Type="Italic">Chlamydia pecorum</Emphasis> genetic diversity in the koala (<Emphasis Type="Italic">Phascolarctos cinereus</Emphasis>)

Background  

Chlamydia pecorum is an obligate intracellular bacterium and the causative agent of reproductive and ocular disease in several animal hosts including koalas, sheep, cattle and goats. C. pecorum strains detected in koalas are genetically diverse, raising interesting questions about the origin and transmission of this species within koala hosts. While the ompA gene remains the most widely-used target in C. pecorum typing studies, it is generally recognised that surface protein encoding genes are not suited for phylogenetic analysis and it is becoming increasingly apparent that the ompA gene locus is not congruent with the phylogeny of the C. pecorum genome. Using the recently sequenced C. pecorum genome sequence (E58), we analysed 10 genes, including ompA, to evaluate the use of ompA as a molecular marker in the study of koala C. pecorum genetic diversity.     

On the Paleozoic bryozoans of the genus <Emphasis Type="Italic">Ascopora</Emphasis> Trautschold

Based on the study of the neotype and the astogeny of the type specimens of the species Ascopora nodosa (Fischer von Waldheim, 1837), the diagnosis and species composition of the genus Ascopora Trautschold, 1876 are emended. The genus Ascopora and three species out of the five included in this genus—A. nodosa (Fischer von Waldheim, 1837); A. sokolovae Schulga-Nesterenko, 1955; and A. latiaxis Schulga-Nesterenko, 1955—are described. A new genus, Tetrasella gen. nov., with the type species T. blanda sp. nov. is described. This genus comprises five species, transferred from the composition of the genus Ascopora. An emended diagnosis of the genus Ascoporella Krutchinina, 1986, is provided. This genus comprises nine species, of which two, A. lecta sp. nov. and A. mera sp. nov., are described as new species.     

Interspecific shape divergence in Aphodiini dung beetles: the case of <Emphasis Type="Italic">Amidorus obscurus</Emphasis> and <Emphasis Type="Italic">A. immaturus</Emphasis> (Coleoptera: Scarabaeoidea)

The dung beetles Amidorus obscurus and A. immaturus are nearly indistinguishable, being characterized by a marked constancy in external morphological traits and little sexual dimorphism in adults. We studied two syntopic populations from the Italian Alps by means of geometric morphometric analyses. To identify possible undetected shape differences between species, we focused on the head, pronotum and scutellum (three external traits) and the epipharynx. Results indicate that the external traits are rather similar in the two species, whereas the epipharynx is clearly different. Interspecific differences in the aedeagus were also taken into account; these are noteworthy because parameres of A. immaturus differ in shape and are at least three times longer than those of A. obscurus. If it is assumed that the diversification of the two species took place during the quaternary ice age, A. immaturus would have evolved these marked differences rather quickly, in keeping with the hypothesis of rapid genital evolution. In an ontogenetic trajectory framework, we also considered the morphology of larvae. Interspecific divergence in the shape of the epipharynx is already evident at the preimaginal stage, whereas that of the genital disc is not. Accordingly, we hypothesise that the feeding and reproductive traits of these two species diverged morphologically when they become functional. Finally, by considering recent advances in ecological and evolutionary knowledge of dung beetles, the pattern of relative constancy in external morphology exhibited by the tribe Aphodiini, and that of great morphological diversification displayed by Onthophagini, were compared, and hypotheses about the origins of these differences discussed.     

Survey of Helminth Parasites in Populations of <Emphasis Type="Italic">Alouatta palliata mexicana</Emphasis> and <Emphasis Type="Italic">A. pigra</Emphasis> in Continuous and in Fragmented Habitat in Southern Mexico

The 2 howler species that occur in southern Mexico, Alouatta palliata mexicana and Alouatta pigra are endangered, mainly as a result of habitat loss and fragmentation from human activity. Little is known about the gastrointestinal parasite communities affecting their populations, and lack of baseline information for populations of howler species in continuous forest habitats, makes evaluations of gastrointestinal parasite prevalence in populations in fragmented landscapes difficult. We report the results of a one-time broad survey of gastrointestinal parasites in fecal samples of individuals from several demographically stable populations of Alouatta palliata mexicana and A. pigra existing in continuous and/or protected forests. We further report similar data for populations of both species in human-fragmented landscapes. We detected 6 parasites for each howler monkey species, but only 3 of them (Trematode I, Controrchis biliophilus, Trypanoxyuris sp.) were common to both species. While parasitic prevalence in populations of both howler species was, in general, higher in the fragmented habitat than in continuous and/or protected forests. The difference is only marginally significant in Alouatta pigra. Some parasites (Coccidia and Strongylid) only appeared in populations in fragmented landscapes. Preliminary data suggest that adult males tended to have higher parasite prevalence values than those of adult females in both howler species. Parasite prevalence is associated to average group size, but not to population density in Alouatta pigra.     

<Emphasis Type="Italic">Scleria rubrostriata,</Emphasis> a new species of Cyperaceae from the Brazilian Atlantic Forest

A new species is here described: Scleria rubrostriata A. C. Araújo & N. A. Brummitt, a herb from the Atlantic forest of Espírito Santo State, south-eastern Brazil. A key to the sections of Scleria and to the American species of Scleria sect. Schizolepis is provided, and an illustration of the new species and comparison to similar taxa are given.     

Cattle ticks of the genera <Emphasis Type="Italic">Rhipicephalus</Emphasis> and <Emphasis Type="Italic">Amblyomma</Emphasis> of economic importance in Tanzania: distribution assessed with GIS based on an extensive field survey

In order to implement a robust integrated tick and tick-borne disease control programme in Tanzania, based on ecological and epidemiological knowledge of ticks and their associated diseases, a national tick and sero-surveillance study was carried out in all 21 regions of the mainland, as well as on Mafia Island, between 1998 and 2001. The current distributions of Rhipicephalus appendiculatus, R. pravus, Amblyomma variegatum, A. gemma, and A. lepidum are illustrated and discussed. Tick distribution maps were assessed using the Weights-of-Evidence method (WofE), and employing temperature, humidity, NDVI, rainfall, and land-cover predictive data. Ground-truthing was done to check correspondence both of the data employed in prediction with land-cover characteristics discerned in the field as well as of the surveyed and predicted tick distributions. Statistical methods were used to analyse associations of the tick species with their environment, cattle density, and other ticks. Except for R. appendiculatus, no appreciable changes were demonstrated in the predicted and observed tick distributions compared to the existing maps that originated in the 1950–1960s. Cattle density influenced the distribution of A. variegatum and, to a certain extent, of A. lepidum, but had no appreciable influence on the distribution of any of the other ticks discussed in this paper, neither did livestock movement. Distinct differences for environmental requirements where observed between different tick species within the same genus. The predictive maps of R. appendiculatus and R. pravus suggest their mutually exclusive distribution in Tanzania, and simultaneous statistical analysis showed R. pravus as a greater specialist. Of the three Amblyomma species, A. variegatum is the most catholic tick species in Tanzania, while both A. gemma and A. lepidum belong to the more specialized species. Despite dissimilar habitat preferences, all three Amblyomma spp. co-exist in central Tanzania, where very heterogeneous habitats may simultaneously satisfy the environmental requirements of all three species. The current study, conducted about 4 decades after the last major survey activities, has shown that changing livestock policies, unrestricted livestock movement and a continuous change in climatic/environmental conditions in Tanzania have brought about only limited changes in the distribution patterns of R. appendiculatus, R. pravus and the three Amblyomma species investigated. Whether this observation indicates a relative indifference of these ticks to environmental and/or climate changes allows room for speculation.     

Comparative cytogenetic analysis of hexaploid <Emphasis Type="Italic">Avena</Emphasis> L. species

Using C-banding method and in situ hybridizatiion with the 45S and 5S rRNA gene probes, six hexaploid species of the genus Avena L. with the ACD genome constitution were studied to reveal evolutionary karyotypic changes. Similarity in the C-banding patterns of chromosomal patterns and in the patterns of distribution of the rRNA gene families suggests a common origin of all hexaploid species. Avena fatua is characterized by the broadest intraspecific variation of the karyotype; this species displays chromosomal variants typical of other hexaploid species of Avena. For instance, a translocation with the involvement of chromosome 5C marking A. occidentalis was discovered in many A. fatua accessions, whereas in other representatives of this species this chromosome is highly similar to the chromosome of A. sterilis. Only A. fatua and A. sativa show slight changes in the morphology and in the C-banding pattern of patterns of chromosome 2C. These results can be explained either by a hybrid origin of A. fatua or by the fact that this species is an intermediate evolutionary form of hexaploid oats. The 7C–17 translocation was identified in all studied accessions of wild and weedy species (A. sterilis, A. fatua, A. ludoviciana, and A. occidentalis) and in most A. sativa cultivars, but it was absent in A. byzantina and in two accessions of A. sativa. The origin and evolution of the Avena hexaploid species are discussed in context of the results.     

Molecular phylogenetic analysis shows that <Emphasis Type="Italic">Amanita ponderosa</Emphasis> and <Emphasis Type="Italic">A. curtipes</Emphasis> are distinct species

Amanita curtipes and A. ponderosa are two Mediterranean taxa sharing a number of morphological features as well as their habitat. Their synonymy or variety status has been proposed by several authors. To clarify this taxonomic issue we have sequenced the D1-D2 domains of the 28S rRNA gene as well as the complete ITS1-5.8S-ITS2 region of several specimens of the two species collected in Spain, and aligned these sequences with those from other Amanita species. Molecular phylogenetic analysis based on the two regions revealed that A. ponderosa and A. curtipes are clearly distinct species. The distribution of Amanita species in the phylogenetic trees was consistent with the division of the genus in subgenera and sections as proposed by previous authors. Sequences of A. ponderosa and A. curtipes were grouped in a monophyletic cluster together with other species of the section Amidella. However, A. ponderosa was closer to other species in the section, such as A. peckiana and A. volvata, than to A. curtipes. We also indicate the macromorphological characters that are most useful to reliably distinguish A. ponderosa and A. curtipes.     

Molecular phylogeny of the <Emphasis Type="Italic">Sinocyclocheilus</Emphasis> (Cypriniformes: Cyprinidae) fishes in northwest part of Guangxi,China

The northwestern part of Guangxi is a typical karst landform. There are about ten species of the genus Sinocyclocheilus distributed in the region. To investigate the phylogenetic relationships and resolve the taxonomic status of these species, we determined nucleotide sequences of complete mitochondrial cytochrome b gene of 11 ingroup species and one outgroup species Barbodes laticeps. Phylogenetic trees were reconstructed using maximum parsimony and maximum likelihood analyses. Phylogenetic results showed that these species cluster as one clade with strong support. The 95% credibility interval (CI) of the divergence time between the species in the northwest part of Guangxi and other species in the genus Sinocyclocheilus is 8.28–12.40Mya. For the karst environment, these species show marked, recent genetic differentiation. From the overall consideration of morphology and molecular data Sinocyclocheilus tianeensis should be a valid species.     

Re-identification of <Emphasis Type="Italic">Aspergillus fumigatus</Emphasis> sensu lato based on a new concept of species delimitation

The species concept of Aspergillus fumigatus sensu stricto has recently been defined by polyphasic taxonomy. Based on the new concept of species delimitations, 146 worldwide strains of Aspergillus fumigatus sensu lato were re-identified. Of those 146 strains, 140 (95.8%) could be identified as A. fumigatus sensu stricto, 3 (2.1%) as A. lentulus, and the remaining 3 strains as A. viridinutans complex, Neosartorya udagawae, and N. cf. nishimurae. Of 98 clinical strains, only 1 from dolphin nostril was identified as A. lentulus and not A. fumigatus sensu stricto. Random amplification of polymorphic DNA-polymerase chain reaction (RAPD-PCR) with primers PELF and URP1F produced nearly the same band patterns among 136 strains of A. fumigatus sensu stricto while discriminated the species from its related species. We also discussed about identification of several atypical A. fumigatus strains from clinical environments.     

<Emphasis Type="Italic">Atactorhynchus duranguensis</Emphasis> n. sp. (Acanthocephala: Atactorhynchinae) from <Emphasis Type="Italic">Cyprinodon meeki</Emphasis> (Pisces: Cyprinodontidae) near Durango,Mexico

Atactorhynchus duranguensisn. sp. (Acanthocephala: Atactorhynchinae) is described from the intestine of Cyprinodon meeki Miller, an endemic freshwater fish from a far-inland locality of Mexico. Diagnostic features include: body small, stout, ventrally curved; small cylindrical proboscis armed with 16 alternating vertical rows of four or five hooks; anterior two or three hooks conspicuous, stout and larger than other hooks, and have large, rod-shaped roots with a markedly and abruptly enlarged base; three posterior hooks of each row are smaller and rootless; single-walled proboscis receptacle; lemnisci equal in length, elongate and robust; and cement gland syncytial, larger than testis. The new species is smaller than A. verecundus Chandler, 1935, the only previously described species in the genus. The shape of the proboscis of the new species is strikingly different from that of A. verecundus, which is widest at the apex. Likewise, the greatest width of the trunk of the new species is in about the middle, differing from that of A. verecundus where the trunk is widest posteriorly. The new species also can be distinguished from A. verecundus because of its much smaller hook lengths and slightly smaller proboscis. In addition, the proportion of large apical proboscis hooks in relation to the small basal hooks is different: the basal hooks of A. verecundus are about half the size of the anterior hooks and but only about a quarter of the size in A. duranguensis. Unlike A. verecundus, the base of the roots are markedly and abruptly enlarged in the new species. Finally, the eggs of the new species are smaller (23–27 × 8–10 m) than those of A. verecundus (27–30 × 12–13 m).     

Ecological niche modeling and geographic distribution of the genus <Emphasis Type="Italic">Polianthes</Emphasis> L. (Agavaceae) in Mexico: using niche modeling to improve assessments of risk status

The genus Polianthes (Agavaceae) is endemic to Mexico and is important at the scientific, economical, and cultural level since prehispanic times. Habitat destruction is one of the main factors affecting populations of Polianthes species, yet little is known about the geographic distribution of this genus, and thus its vulnerability to habitat change. We compared three different approaches to measure the Polianthes species area of distribution to assess the risk of species extinction applying the MER (Method of Evaluation of Risk extinction of wild species for Mexico): area of occupancy, extent of occurrence, and ecological modeling. We also found the richness areas of distribution of this genus. We compared the species distributions with Terrestrial Protected Regions (TPR) and Natural Protected Areas (NPA). Although the three methods used to calculate the species area of distribution agree about the highly restricted nature of Polianthes species. The area of occupancy sub-estimate the species distribution, while the extent of occurrence over-estimate it for species with disjoint distribution. Thus, we recommend the use of ecological modeling to improve the assessment of the current species distribution area to apply the MER. Most Polianthes species are distributed in the Sierra Madre Occidental and Transvolcanic Belt. Three species do not occur in any of the NPA or TPR, one species has suitable habitat in three TPR but has not been recorded there, and one species, P. palustris, is likely extinct.