共查询到20条相似文献,搜索用时 15 毫秒
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作为一种高效的定量PCR技术,实时荧光定量PCR(qRT-PCR)因其灵敏度高、特异性强、定量准确等优点,已被广泛运用于昆虫基因表达和转录分析。然而,为了控制样本RNA在质量和逆转录效率上存在差异,必须筛选表达稳定的"看家基因"作为内参基因,对目的基因表达量进行校正和标准化。许多学者研究表明,昆虫种类和实验条件的不同,导致选择的内参基因也不尽相同。因此,本文综述了前人有关昆虫内参基因的研究及其稳定性评价,为其它昆虫内参基因的研究提供理论参考依据。 相似文献
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微量RNA的cDNA PCR文库的构建 总被引:5,自引:0,他引:5
使用PCR(polymerase chain reaction)技术,调制了mRNA的cDNA PCR文库,实验证明,cDNA PCR文库能使原cDNA的量放大数百倍,同时,使用人体K562培养细胞的总RNA,对cDNA PCR文库法和反转录中的β-Actin的cDNA量进行了比较,cDNA PCR文库法中的β-Actin的cDNA量大于高于反转录中的β-Actin的cDNA量,使用75pg的人体K562培养细胞的总RNA,调制成50ul的CDNA PCR文库,使用1ul的CDNA PCR文库进行了PCR反应时,可对文库中β-Actin的CDNA进行PCR检测,因此,CDNA PCR文库显示了良好的信息放大性能。 相似文献
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Traditional real-time quantitative polymerase chain reaction protocols cannot be used accurately with symbiotic organisms unless the relative contribution of each symbiotic compartment to the total nucleic acid pool is known. A modified 'universal reference gene' protocol was created for reef-building corals and sea anemones, anthozoans that harbour endosymbiotic dinoflagellates belonging to the genus Symbiodinium. Gene expression values are first normalized to an RNA spike and then to a symbiont molecular proxy that represents the number of Symbiodinium cells extracted and present in the RNA. The latter is quantified using the number of genome copies of heat shock protein-70 (HSP70) amplified in the real-time quantitative polymerase chain reaction. Gene expression values are then normalized to the total concentration of RNA to account for differences in the amount of live tissue extracted among experimental treatments and replicates. The molecular quantification of symbiont cells and effect of increasing symbiont contributions to the nucleic acid pool on gene expression were tested in vivo using differentially infected sea anemones Aiptasia pulchella. This protocol has broad application to researchers who seek to measure gene expression in mixed organism assemblages. 相似文献
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Pei‐An Tang Hong‐Bo Jiang Yong‐Qiang Xu Feng‐Ming An Jin‐Jun Wang 《Archives of insect biochemistry and physiology》2009,72(1):34-47
Two nicotinic acetylcholine receptor (nAChR) subunit genes, Lbα1 and Lbα8, were isolated and characterized from psocid, Liposcelis bostrychophila Badonnel, using the rapid amplification of cDNA ends (RACE) technique. They are the first two nAChR family members isolated from the insect order of Psocoptera. The full‐length cDNAs of Lbα1 (GenBank accession number: EU871527) and Lbα8 (EU871526) consist of 2,025 and 1,763 nucleotides, respectively, and an open reading frame of 1,644 and 1,608 bp encoding 547 and 535 amino acid proteins, respectively. Both genes have typical features of nAChR family members, though they share only 56% identity in amino acid sequence. The dendrogram generated by the MEGA 3.1 program shows that the protein deduced by Lbα1 had the closest phylogenetic relationship to Agamα1 from Anopheles gambiae and Amelα1 from Apis mellifera, and Lbα8 shares the highest identity with Agamα8 from An. gambiae and Amelα8 from A. mellifera. Quantitative real‐time PCR analysis showed that Lbα1 was expressed 2.03–6.54‐fold higher than Lbα8 at the different developmental stages of L. bostrychophila. The highest expression levels of Lbα1 and Lbα8 were both detected at adult stage and the lowest were at the third and fourth nymphal stages, respectively. There was a stable and relatively low expression level for Lbα1, whereas there was a descending expression pattern for Lbα8 in the 1st through the 4th nymphal stadia. © 2009 Wiley Periodicals Inc. 相似文献
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YeongHo Kim YiSeul Kim Donghun Kim SeYeon Kim GyeongJin Seo SooHyun Shin JaeYoung Lee Young Ho Kim 《Entomological Research》2019,49(6):277-283
Drosophila melanogaster is attracted to chemicals produced by fermentation and it is abundantly found in rotten fruits. Considering its habitat, the fruit fly is reported to be tolerant to environmental chemicals. Quantitative real‐time polymerase chain reaction was employed to investigate the expression pattern and physiological function of genes putatively involved in chemical detoxification. In quantitative real‐time polymerase chain reaction assays, normalization of target gene expression with internal reference genes is required. These reference genes should be stably expressed during chemical exposure and in chemical‐free conditions. In this study, therefore, we used two programs (geNorm and BestKeeper) to evaluate the expression stability of five reference genes (nd, rpL18, ef1β, hsp22 and tbp) in female adult flies exposed to various concentrations of methanol and ethyl acetate. Four genes (nd, rpL18, ef1β and tbp) were found to be suitable for use as reference genes in methanol‐treated flies and three genes (ef1β, nd, tbp) were found to be suitable for use as reference genes in ethyl acetate‐treated flies. These results suggested that a combination of two genes among these stably expressed genes can be used for accurate normalization of target gene expression in quantitative real‐time polymerase chain reaction‐based determination of gene expression profiles in D. melanogaster treated with both chemicals. 相似文献
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通过研究不同抗旱性小麦品种中转录因子表达水平的差异,为阐明小麦抗旱机制奠定基础。依据候选基因序列设计PCR引物,以干旱胁迫后0、3、6、9、12和24 h的小麦叶片为实验材料,以26S rRNA为内参,运用荧光定量PCR技术,检测Wdreb2、Wlip19基因在干旱敏感性和干旱耐受性小麦叶片中的相对表达量。定量PCR结果显示:干旱胁迫后,Wdreb2、Wlip19基因在干旱敏感性小麦叶片中的表达明显低于干旱耐受性小麦,在不同品种叶片中的响应时间和表达趋势存在差异。研究认为,Wdreb2、Wlip19基因在不同品种小麦受到干旱胁迫后的表达差异,与该品种小麦的抗旱能力具有一定的相关性。 相似文献
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Andrea Di Cesare Ester M. Eckert Alessia Teruggi Diego Fontaneto Roberto Bertoni Cristiana Callieri Gianluca Corno 《Molecular ecology》2015,24(15):3888-3900
The fate of antibiotic resistance genes (ARGs) in environmental microbial communities is of primary concern as prodromal of a potential transfer to pathogenic bacteria. Although of diverse origin, the persistence of ARGs in aquatic environments is highly influenced by anthropic activities, allowing potential control actions in well‐studied environments. However, knowledge of abundance and space–time distribution of ARGs in ecosystems is still scarce. Using quantitative real‐time PCR, we investigated the presence and the abundance of twelve ARGs (against tetracyclines, β‐lactams, aminoglycosides, quinolones and sulphonamides) at different sampling sites, depths and seasons, in Lake Maggiore, a large subalpine lake, and in the area of its watershed. We then evaluated the correlation between each ARG and a number of ecological parameters in the water column in the deepest part of the lake. Our results suggest the constitutive presence of at least four ARGs within the bacterial community with a high proportion of bacteria potentially resistant to tetracyclines and sulphonamides. The presence of these ARGs was independent of the total bacterial density and temperature. The dynamics of tet(A) and sulII genes were, however, positively correlated with dissolved oxygen and negatively to chlorophyll a, suggesting that the resistant microbes inhabit specific niches. These observations indicate that the lake is a reservoir of antibiotic resistances, highlighting the need of a deeper understanding of the sources of ARGs and the factors allowing their persistence in waters. 相似文献