The subfamily classification of the Micropezidae and the genera of Eurybatinae (Diptera: Schizophora)

The classification of the family Micropezidae is re-examined and a key is given to the five subfamilies now recognised, of which Calycopteryginae is described as new and Eurybatinae is raised from tribal rank. Metopochetini is a new tribe of Eurybatinae. A key is given to the nine genera now included in the Eurybatinae, of which Papeza is described as new. P.szentivanyi is a new species from Papua. Notes on the taxonomy and distribution of genera are included. The position of Anaeropsis Bigot in the Micropezidae is confirmed. New synonymies are established as follows: Crepidochetus Enderlein (= Gongylocephala Czerny syn. n.); Metopochetus bivittatus (Macquart) (= Calobata tenuipes Walker syn. n.). New generic combinations are as follows: Metopochetus terminalis (Walker) and M.compressus (Walker) from Calobata; Crepidochetus nigrifemur (Czerny), C.pallidus (Steyskal), and Cater (Steyskal) from Gongylocephala; Crosa fragilis (Walker) from Micropeza; Crosa nigriventris (Enderlein) and C.uneifera (de Meijere) from Eurybata.     

Taxonomic revision of the cestodes of the family Progynotaeniidae (Cyclophyllidea) parasitising stone curlews (Charadriiformes: Burhinidae)

The type series of Progynotaenia evaginata Fuhrmann, 1909 from Burhinus senegalensis in Sudan, P. foetida Meggitt, 1928 from B. oedicnemus in Egypt and Angularia australis Maplestone, 1921 from B. grallarius in Australia are redescribed. As a comparative material, specimens of P. evaginata from B. oedicnemus in Kazakhstan were studied. The type-series of P. evaginata and P. foetida were found to be heterogeneous due to the presence of scoleces and fragments of cestodes of the genus Stenovaria Spasskii & Borgarenko, 1973 (Dilepididae). For P. foetida, a lectotype is designated. P. foetida is recognised as a synonym of P. evaginata (new synonymy). Angularia australis, previously considered a member of the Dilepididae, is transferred to the Progynotaeniidae as a synonym of P. evaginata (new synonymy). The synonymy of P. indica Johri, 1963 with P. evaginata, proposed by Ryzhikov & Tolkacheva (1981), is supported. The host range and the geographical distribution of P. evaginata are restricted to birds of the genus Burhinus from the Eastern Hemisphere.     

Relationship between the Molecular Weight and the Color Intensity of Color Components of Melanoidin from the Glycine-Xylose System

The molecular weights of color components (designated as P1, P2, P3, P4, P5, P6, P7 and P8 in order of elution from a DEAE-cellulose column) isolated by the conversion of color components of melanoidin produced from the glycine-xylose system in an oxidative browning were studied in relation to the color intensity. The molecular weights of P5, P6, P7 and P8 estimated by gel filtration on Sephadex G–50, G–75 and G–150 using dextran as a standard were approximately 2,140, 3,550, 5,600 and 14,200, respectively. The molecular weights of P1, P2, P3 and P4 could not be estimated by the gel filtration method because of their low values.

On the other hand, a linear relationship between Kd, the distribution coefficient in dextran gel, and E₄₅₀ (E) of the color components was observed. Thus, there is considered to be a linear relationship between log E and log molecular weight (M). The correlation coefficient between log E and log M was calculated to be from 0.96 to 0.98 in the visible wavelength region. Therefore, the equation, E=k × M^α was adopted. The value, E=2.15 × M^0.29 was obtained from melanoidin prepared from the glycine-xylose system. The molecular weights of P1, P2, P3 and P4 were calculated from the equation to be 290, 360, 700 and 1,200, respectively. The equation, E=k × M^α, was demonstrated to be reasonably applicable to the melanoidin from Glu-, Lys-, Gly₂-, Gly-Leu-, and Gly₃-xylose systems. It is concluded that the polymerization of the structural unit in melanoidin occurs in an oxidative browning and that their color tone is darkened and the color in melanoidin is increased by polymerization according to the equation, E=k × M^α.     

A contribution to the knowledge of longicorn beetles (Coleoptera,Cerambycidae) of the Caucasus: 7. Notes on the distribution of some species

The distribution of 28 species of longicorn beetles in the Caucasus and neighboring territories is discussed with new distributional data reported for some species. The records of Rhagium fasciculatum, Paraclytus sexguttatus, and Anaglyptus arabicus from northern Iran (Elburz Mts.) are considered erroneous. Photographs of old specimens of Phytoecia pontica (a male labeled “Caucasus Leder”) and Ph. wachanrui (a male labeled “Daghestan”) are given; the occurrence of these species in the Caucasus is considered probable. The records of Cortodera flavimana, Pedostrangalia verticenigra and Chlorophorus hircanus from northeastern Azerbaijan are considered erroneous; these species are not known from the Caucasus. The distribution of Brachypteroma ottomanum, Leioderes kollari, Phymatodes glabratus, and Dorcadion equestre still remains to be proved; the known records of B. ottomanum supposedly refer to B. holtzi, and those of L. kollari, to L. tuerki. It is also speculated that the records of Pedostrangalia revestita from Borjomi refer to the closely related P. tokatensis, and the records of Pedostrangalia emmipoda from Sevan and Batumi, to P. kurda.     

Organization of the origins of replication of the chromosomes of Mycobacterium smegmatis, Mycobacterium leprae and Mycobacterium tuberculosis and isolation of a functional origin from M. smegmatis

The genus Mycobacterium is composed of species with widely differing growth rates ranging from approximately three hours in Mycobacterium smegmatis to two weeks in Mycobacterium leprae. As DNA replication is coupled to cell duplication, it may be regulated by common mechanisms. The chromosomal regions surrounding the origins of DNA replication from M. smegmatis, M. tuberculosis, and M. leprae have been sequenced, and show very few differences. The gene order, rnpA-rpmH-dnaA-dnaN-recF-orf-gyrB-gyrA, is the same as in other Gram-positive organisms. Although the general organization in M. smegmatis is very similar to that of Streptomyces spp., a closely related genus, M. tuberculosis and M. leprae differ as they lack an open reading frame, between dnaN and recF, which is similar to the gnd gene of Escherichia coli. Within the three mycobacterial species, there is extensive sequence conservation in the intergenic regions flanking dnaA, but more variation from the consensus DnaA box sequence was seen than in other bacteria. By means of subcloning experiments, the putative chromosomal origin of replication of M. smegmatis, containing the dnaA-dnaN region, was shown to promote autonomous replication in M. smegmatis, unlike the corresponding regions from M. tuberculosis or M. leprae.     

On the Structure of the Avian Maculae

The maculae of the labyrinths of several avian species were examined. The striola of the macula utriculi and lagenae is tri-zonal, consisting of two zones of hair cells type I (HC I) located on each side of a middle zone of hair cells type II (HC II). An exception is the mute swan, in which the macula utriculi has a striola consisting of one broad zone of HC I. The macula sacculi is, in its central part, mainly consisting of HC I, and the striola does not have a tri-zonal structure. The hair cells in the macula utriculi are polarized with their kinociliar end oriented towards the striola, while in the macula sacculi and lagenae they are oriented away from this dividing line. A varying number, from 1 to 12, of HC I are enclosed within the same nerve chalice. The macula sacculi seems to contain chalices with slightly more HC I than the two other maculae do.     

Studies on the bacterial diseases of Sudan crops

New records are presented of bacterial diseases affecting the following weed plants: Heliotropium sudanicum, Rhynchosia memnonia, Vigna radiata, V. pubigera, Euphorbia acalyphoides and Phyllanthus niruri. Bacterial leaf blight of pigeon pea (Cajanus cajan) caused by Xanthomonas phaseoli f. cajani is reported for the first time from the Sudan. The causal bacteria, all of which belong to the genus Xanthomonas, are compared with related pathogens. The differences between these bacteria are considered of little diagnostic value. Pathogenically, they can be separated into three groups: (i) the Heliotropium pathogen; (ii) the bacteria affecting leguminous plants; and (iii) the bacteria affecting species of the family Euphorbiaceae. Because of the diversity in opinion on speciation in the genus Xanthomonas, two alternative proposals are put forward. In the first, Xanthomonas is considered a monotypic genus with X. campestris as the sole species. The pathogens reported in this work from previously unrecorded hosts, which proved to differ in pathogenicity from established ones, are considered to be new formae speciales. These are X. campestris f.sp. heliotropii from H. sudanicum, X. campestris f.sp. rhynchosiae from R. memnonia, X. campestris f.sp. vigna-radiatae from V. radiata, X. campestris f.sp. euphorbiae from E. acalyphoides and X. campestris f.sp. phyllanthii from P. niruri. The organism from V. pubigera is accordingly identified as X. campestris f.sp. vignicola. Other bacteria used for comparison are also reduced to ff.sp. of X. campestris. The other proposal is to lump together pathogens with overlapping host ranges in a single species that comprises a number of ff.sp. differing in pathogenicity. Thus the bacteria from leguminous plants are all considered to belong to X. phaseoli as previously suggested by Sabet. New ff.sp. are created for the pathogens from R. memnonia (X. phaseoli f.sp. rhynchosiae), and V. radiata (X. phaseoli f.sp. vigna-radiatae). The organism from V. pubigera is identified in this case as X. phaseoli f.sp. vignicola. The bacteria from members of the Euphorbiaceae are considered to belong to X. ricini on priority grounds. X. cassavae and X. poinsettiaecola which have been used for comparison are reduced to the ff.sp. X. ricini f.sp. cassavae and f.sp. poinsettiaecola respectively. Two new ff.sp. are created: for E. acalyphoides pathogen, X. ricini f.sp. euphorbiae and for P. niruri pathogen, X. ricini f.sp. phyllanthii. The creation of a new species (X. heliotropii sp.nov.) is proposed for the Heliotropium pathogen. The present study shows that many weed plants may be affected with new bacterial strains that can also infect cultivated crops.     

Revision of the Chinese species of the genus Coenochilus Schaum (Coleoptera,Scarabaeidae, Cetoniinae)

Summary

The Chinese species of the genus Coenochilus Schaum, 1841 are revised, including a new species, C. pilosus n. sp. described from southern China (also from Vietnam and Laos). The lectotype for Coenochilus uncinatipes Moser, 1915 is designated, and this name is recognized as a junior synonym of C. bifoveolatus Fairmaire, 1888. Previously published synonymy of Coenochilus apicalis Westwood, 1873 and C. armiger Westwood, 1873 is confirmed based on the examination of type specimens. The neotype of C. tonkinensis Moser, 1910 is designated, and C. clinteroceroides Jákl, 2015 is synonymized with this species. Coenochilus tonkinensis is newly recorded from China, while Chinese records of C. nitidus Arrow, 1910 are verified as misidentification of C. striatus Westwood, 1873, thus C. nitidus is removed from the Chinese fauna. Diagnoses and illustrations are provided for all five Chinese species. A key to Chinese species and new distribution records are also presented.??     

The Evolution of RecD Outside of the RecBCD Complex

The common understanding of the function of RecD, as derived predominantly from studies in Escherichia coli, is that RecD is one of three enzymes in the RecBCD double-stranded break repair DNA recombination complex. However, comparative genomics has revealed that many organisms possess a recD gene even though the other members of the complex, recB and recC, are not present. Further, bioinformatic analyses have shown that there is substantial sequence dissimilarity between recD genes associated with recB and recC (recD1), and those that are not associated with recBC (recD2). Deinococcus radiodurans, known for its extraordinary DNA repair capability, is one such organism that does not possess either recB or recC, and yet does possess a recD gene. The recD of D. radiodurans was deleted and this mutant was shown to have a capacity to repair double-stranded DNA breaks equivalent to wild-type. The phylogenetic history of recD was studied using a dataset of 120 recD genes from 91 fully sequenced species. The analysis focused upon the role of gene duplication and functional genomic context in the evolution of recD2, which appears to have undergone numerous independent events resulting in duplicate recD2 genes. The role of RecD as part of the RecBCD complex appears to have a divergence from an earlier ancestral RecD function still preserved in many species including D. radiodurans.     

Cloning of the isocitrate lyase gene (ICL1) from Yarrowia lipolytica and characterization of the deduced protein

The ICL1 gene encoding isocitrate lyase was cloned from the dimorphic fungus Yarrowia lipolytica by complementation of a mutation (acuA3) in the structural gene of isocitrate lyase of Escherichia coli. The open reading frame of ICL1 is 1668 by long and contains no introns in contrast to currently sequenced genes from other filamentous fungi. The ICL1 gene encodes a deduced protein of 555 amino acids with a molecular weight of 62 kDa, which fits the observed size of the purified monomer of isocitrate lyase from Y. lipolytica. Comparison of the protein sequence with those of known pro- and eukaryotic isocitrate lyases revealed a high degree of homology among these enzymes. The isocitrate lyase of Y. lipolytica is more similar to those from Candida tropicalis and filamentous fungi than to Sacharomyces cerevisiae. This enzyme of Y. lipolytica has the putative glyoxysomal targeting signal S-K-L at the carboxy-terminus. It contains a partial repeat which is typical for eukaryotic isocitrate lyases but which is absent from the E. coli enzyme. Surprisingly, deletion of the ICL1 gene from the genome not only inhibits the utilization of acetate, ethanol, and fatty acids, but also reduces the growth rate on glucose.     

Studies of fossil hyaenids: the genus Adcrocuta Kretzoi and the interrelationships of some hyaenid taxa

Material of the Miocene hyaenid Adcrocuta eximia from China is analysed statistically. No heterogeneities were found within this material. Comparisons with material from Samos and Pikermi, Greece, show that no taxonomic differentiation between these three samples is warranted. Adcrocuta eximia latro from the Sivalik deposits is provisionally considered a valid subspecies. The species A. australis from Langebaanweg, South Africa is removed from Adcrocuta to the genus Chasmaporthetes. The phylogenetic position of Adcrocuta has been subject to dispute, and for this reason we present a study of the interrelationships of selected hyaenid taxa using numerical cladistic methods. Two equally parsimonious trees of length 47 and consistency index 0.766 were found. Adcrocuta is placed as a sister-group to the Recent Crocuta crocuta, and not as a separate clade as suggested by other workers. Recent hyaenids form a crown-group which does not extend deep into the cladogram. Hyaena hyaena and H. brunnea are not sister-groups, and we resurrect the genus Parahyaena for the latter species.     

Molecular characterisation of the inactive allele of the gene Glu-A1 and the development of a set of AS-PCR markers for HMW glutenins of wheat

The present work reports new PCR markers that amplify the complete coding sequence of the specific alleles of the high molecular weight (HMW) glutenin genes. A set of AS-PCR molecular markers was designed which use primers from nucleotide sequences of the Glu-A1 and Glu-D1 genes, making use of the minor diffeences between the sequences of the x1, x2* of Glu-A1, and the x5 and y10 of Glu-D1. These primers were able to distinguish between x2* and the x1 or xNull of Glu-A1. Also x5 was distinguishable from x2, and y10 from y12. The primers amplified the complete coding regions and corresponded to the upstream and downstream flanking positions of Glu-A1 and Glu-D1. Primers designed to amplify the Glu-A1 gene amplified a single product when used with genomic DNA of common wheats and the xNull allele of this gene. This work also describes the cloning and characterisation of the nucleotide sequence of this allele. It possesses the same general structure as x2* and x1 (previously determined) and differs from these alleles in the extension of the coding sequence for a presumptive mature protein with only 384 residues. This is due to the presence of a stop codon (TAA) 1215-bp downstream from the start codon. A further stop codon (TAG), 2280-bp downstream from the starting codon is also found. The open reading frame of xNull and x1 alleles has the same size in bp. Both are larger than x2* which shows two small deletions. The reduced size of the presumptive mature protein encoded by xNull could explain the negative effect of this allele on grain quality. Received: 16 May 1999 / Accepted: 16 September 1999     

On the identity of Herbertus borealis (Jungermanniopsida: Herbertaceae), with notes on the possible origin of H. sendtneri

Abstract

The assumed European endemic Herbertus borealis differs from the closely related Holarctic species H. aduncus and H. stramineus by the convex vitta, a strongly asymmetrical leaf lamina and the dorsal lobes being much broader than the ventral ones. The latter character recurs in Asian H. delavayi and tropical American H. acanthelius. Phylogenetic analyses of nrITS sequences resolve H. borealis from the British Isles in a robust monophyletic lineage with H. delavayi from Bhutan whereas H. acanthelius is placed in a separate clade. Based on the molecular topology and morphological comparisons we propose to lower H. borealis to a synonym of H. delavayi. Accessions of H. dicranus from Africa and Asia are placed sister to a robust clade with H. delavayi, H. stramineus and H. aduncus. A sequence of H. giraldianus is nested within H. dicranus, supporting an earlier view that a synonym of the polymorphic H. dicranus is at hand. Herbertus sendtneri from Malaysia is placed sister to a clade with H. sendtneri accessions from Austria, the Azores and tropical America in a robust sister relationship. Based on this topology we deduce an Asian origin of H. sendtneri.     

The function of the octamer-binding site in the DRA promoter

The octamer binding site, which is located immediately upstream of the poorly conserved DRA TATA sequence, is important fof high levels of expression of this human major histocompatibility class II gene in B cells. In this study, we demonstrate that the substitution of the DRA TATA sequence with the TATA box from the adenovirus E1b promoter revomes the requirements for the octamer binding site for high levels of expression from DRA promoter. Since only the TATA box from the E1b but bot the DRA promoters binds the TATA binding protein, we conclude that the octamer binding site helps to recruit TBP to the DRA promoter.     

To the knowledge of the leaf-beetle tribe Nodinini (Coleoptera,Chrysomelidae, Eumolpinae) from the Philippines and Borneo

Three new species of the genus Tricliona are described from the Philippines and Borneo Island: T. bakeri sp. n., T. sandakana sp. n., and T. philippina sp. n. Stethotes aedilis Weise are transferred to the genus Cleoporus, and Stethotes ferruginea Weise, to Tricliona. Typophorus quadrimaculatus Baly is transferred to Cleoporus, and C. cruciatus Lefèvre is synonymized with it. The genus Coniomma Weise is redescribed. For each species, drawings of the genitalia are provided. The species of Cleoporus from the Philippines and all the species of the Tricliona ferruginea group are keyed.     

Revision of the species of the Tychus rufus group (Coleoptera: Staphylinidae: Pselaphinae)

The species belonging to Tychus rufus group are revised. Eleven species are recognized, described and illustrated and a key to their identification is provided. Nine taxa are new to science: Tychus carpathius n. sp. from Karpathos island (Greece); T. torticornis n. sp. from Lesbos Island (Greece); T. pisidicus n. sp. and T. inermis n. sp. from southwestern Turkey; T. antiocheus n. sp. and T. effeminatus n. sp. from southeastern Turkey; T. artvinensis n. sp. from northeastern Turkey, and T. sidonicus n. sp. and T. libanus n. sp. from Lebanon.     

Scutelluid trilobites from the Silurian of New South Wales

Abstract: Twenty‐six species (nineteen of them formally named) of scutelluid trilobites belonging to eight genera are described from limestones of the lower Wenlock to Ludlow Mirrabooka Formation and its stratigraphical equivalents in the Orange district of New South Wales. Two genera, Borenoria and Mirrabooka, are new. Japonoscutellum, previously employed mainly for several species from Japan, is a globally widely distributed genus in rocks of middle Llandovery to Ludlow age and includes a number of species previously assigned to Kosovopeltis. Japonoscutellum is remarkably diverse in the faunas from Orange where it is represented by eleven species, one of them known also from Kazakhstan. Flexiscutellum and Tosacephalus are regarded as junior synonyms of Decoroscutellum and Kosovopeltis, respectively. The homology of various scutelluid cephalic structures is discussed, in particular the cephalic borders and border furrows that have routinely been misidentified; the term ‘bolus’ is introduced for the variably developed swelling that is enclosed by S1 on the glabella of most scutelluids. New species are Australoscutellum iota, A. microps, A. pulex, A. trica, Borenoria cirrita, Decoroscutellum planes, Eoscutellum annosum, Illaenoscutellum tryo, Japonoscutellum borenorense, J. crassum, J. diascetum, J. gephyricum, J. guttulatum, J. serangicum, J. strabo, Kosovopeltis trepida, K. xynon and Mirrabooka harryi. Some of these trilobites show strong affinity with species from the Kurosegawa Terrane of south‐western Japan and the Chu‐Ili Terrane of Kazakhstan, as previously reported also for the effaced Illaenina from the same limestones. Australoscutellum and Mirrabooka are presently known only from eastern Australia. The new genus Securifrons is proposed for several species previously assigned to Kosovopeltis or Eokosovopeltis from the Sandbian or Katian to Llandovery of North Greenland, Canada, Scotland, South China and New South Wales.