A contribution to the rust flora (Uredinales) on Aizoaceae in southern Africa

Rust fungi on Aizoaceae in southern Africa have been examined and reported based on 27 specimens collected during a biodiversity study and previously collected herbarium specimens. Eight species including five new species have been recognized, and they are described in detail and illustrated. Together with two additional species in literature, ten species of rust fungi are now recognized on Aizoaceae in southern Africa. Part 223 in the series “Studies in Heterobasidiomycetes” from the Botanical Institute, University of Tübingen.     

Species richness and floristic relationships between mesas and their surroundings in southern African Nama Karoo

Abstract. Floristic composition of 14 mesas (i.e. flat‐top mountains) in four different study areas was investigated in southern African Nama Karoo. The study areas were arranged along a latitude gradient. Two simple questions were asked: are mesas potential conservation islands (a) in terms of re‐colonization potential and (b) in terms of species richness? Detailed vegetation surveys along a transect from the plains to the top of each mesa were summarized to obtain species composition for the three main habitats: plain, slopes and plateau. Floristic similarities between plains and mesa habitats were used to answer question (a), and species richness was used to answer question (b). Geographic position, high within‐area variability and elevation were found to largely influence the findings, resulting in only few consistent trends. The main findings of this study were, however: (1) mesas can act as sources for re‐colonization as well as havens for species adapted to mountain habitats. (2) Considering total species richness, mesa habitats were richer in species than plains in the northern, but not the southernmost study area. (3) Scaled by area, mesa plateaus emerged as the most species‐rich in all study areas. (4) Smaller and medium‐sized mesas showed greater re‐colonization potential, i.e. shared more species with their surrounding plains. (5) Medium‐sized to larger mesas supported plant communities more distinct from the surrounding plains. (6) A cut‐off point of approximately 240 m above the surrounding plain was indicated for the shift from ‘re‐colonization’ to ‘remnant’ function. These findings stress the importance for the protection of mesa habitats in view of increasing human pressure on mountain habitats.     

A contribution to the rust flora (Uredinales) of southern Africa,with an emphasis on Namibia

Five new rust species are described and hitherto unknown spore states for the following seven species are reported: Puccinia desertorum on Evolvulus alsinoides, Uromyces comptus on Merremia bipinnatipartita, Puccinia halsei on Acacia hereroensis, Ravenelia transvaalensis on Acacia mellifera, Puccinia abutili on Abutilon angulatum, on Abutilon cf. austroafricanum, and on Abutilon cf. rehmannii, Puccinia lycii on Lycium sp. and Puccinia turgida on Lycium europaeum and on Lycium cf. oxycarpum. We also examined Uredo combreticola on Combretum cf. engleri, on Combretum hereroense, and on Combretum zeyheri, Puccinia afra on Lycium sp., and Uredopeltis cf. chevalieri on Grewia flavescens. All mentioned rust fungi are described in detail and are shown by line drawings. Selected species are illustrated with SEM-photographs. Part 220 in the series “Studies in Heterobasidiomycetes” from the Botanical Institute, University of Tübingen     

Inland salt waters of southern Africa

Inland salt lakes are widely distributed in southern Africa: they are particularly common in South Africa, but many occur in Namibia and Botswana. All are shallow, and most are ephemeral with salinities that are not very high (mostly < 50 g l⁻¹). Fringing zones of halophytes or submerged macrophytes are neither well-developed nor taxonomically diverse. The Cyanobacteria, especially Nodularia spumigena, often dominate the phytoplankton. The fauna of the Makgadikgadi area (northeast Botswana) is diverse and is similar to that of East African salt lakes. The aquatic fauna of salt water south of the Makgadikgadi Basin, on the other hand, is extremely depauperate, has no well-defined assemblage confined to saline waters, and appears mostly to comprise tolerant freshwater forms. Lovenula falcifera and Metadiaptomus transvaalensis (diaptomid copepods), Moina micrura (Cladocera) and Brachionus plicatilis (Rotifera) are frequently encountered zooplankton species, a few species of insects (Anisops sp., beetles, chironomids and ephydrids) are the principal non-planktonic macroinvertebrates. Artemia ‘salina’ is occasionally present, but may be an introduced form. The avifauna, in contrast to the aquatic macroinvertebrate fauna, is rich, with the greater and lesser flamingo often common.     

Species richness,endemism and conservation of Mexican gymnosperms

An analysis of the distribution patterns of 124 Mexican gymnosperm species was undertaken, in order to detect the Mexican areas with high species richness and endemism, and with this information to propose areas for conservation. Our study includes an analysis of species richness, endemism and distributional patterns of Mexican species of gymnosperms based on three different area units (states, biogeographic provinces and grid-cells of 1° × 1° latitude/longitude). The richest areas in species and endemism do not coincide; in this way, the Sierra Madre Oriental province, the state of Veracruz and a grid-cell located in the state of Oaxaca were the areas with the highest number of species, whereas the Golfo de México province, the state of Chiapas and a grid-cell located in this state were the richest areas in endemic species. A weighted endemism and corrected weighted endemism indices were calculated, and those grid-cells with high values in both indices and with high species richness were considered as hotspots; these grid-cells are mainly located in Southern and Central Mexico.     

Predictors of mammal species richness in KwaZulu-Natal,South Africa

The management of multi-functional landscapes warrants better knowledge of environment-richness associations at varying disturbance levels and habitat gradients. Intensive land-use patterns for agricultural purposes lead to fragmentation of natural habitat resulting in biodiversity loss that can be measured using landscape metrics to assess mammalian richness. Since carnivores and herbivores are likely to show different responses to disturbance, we calculated carnivore, non-carnivore, and total mammal species richness from camera surveys using a first order Jackknife Estimator. Richness was compared along a habitat gradient comprising coastal forest, Acacia thicket, and highland in KwaZulu-Natal, South Africa. We used standardized OLS regression models to identify climatic and disturbance variables, and landscape metrics as predictors of species richness. The estimated total and non-carnivore species richness were highest in coastal forest, while carnivore species richness was highest in highland followed by coastal forest and Acacia thicket. Average monthly maximum temperature was a significant predictor of all richness groups, and precipitation of the wettest month and isothermality determined total and non-carnivore species richness, respectively. These climatic variables possibly limit species distribution because of physiological tolerance of the species. Total mammal richness was determined by mean shape (+) and habitat division (−) while diversity (+) and patch richness (−) explained carnivore species richness. Mean shape index (+) influenced non-carnivore richness. However, habitat division and patch richness negatively influenced total mammal richness. Though habitat patch size and contiguity had a weak positive prediction, these metrics demonstrated the importance of habitat connectivity for maintaining mammal richness. The identification of these climatic and landscape patterns is important to facilitate future landscape management for mammal conservation in forest-mosaics.     

Species richness and biogeography of non-acarine arachnids in Namibia

A total of 821 species, 296 genera, and 69 families of non-acarine arachnids (Araneae, Solifugae, Scorpiones, Pseudoscorpiones, Opiliones and Amblypygi) are presently known from Namibia. Patterns of spider, solifuge and scorpion species richness and endemism are summarized relative to the 14 major Namibian types of vegetation. Spiders are most speciose in the higher rainfall areas, solifuges in the dry areas, and scorpions in rocky areas. Namibia probably has the world's greatest diversity of solifuges. Many arachnids endemic to Namibia are associated with the Namib Desert sand dunes.     

Effects of woody plant species richness on mammal species richness in southern Africa

Aim To determine the relationship between the species richness of woody plants and that of mammals after accounting for the effect of environmental variables. Location Southern Africa, including Namibia, South Africa, Lesotho, Swaziland, Botswana, Zimbabwe, and part of Mozambique. Methods We used a comprehensive dataset including the species richness of mammals and of woody plants and environmental variables for 118 quadrats (each of 25,000 km²) across southern Africa, and used structural equation models (SEMs) and spatial regressions to examine the relationship between the species richness of woody plants and of mammal trophic guilds (herbivores, insectivores, carni/omnivores) and habitat guilds (aquatic/fossorial, ground‐living, climbers, aerial), after controlling for environment. We compared the results of SEMs with those of single‐predictor regressions (without controlling for environment) and of spatial regressions (controlling for both environment and residual spatial autocorrelation). Results The geographical variation of mammal species richness in southern Africa was strongly and positively related to that of woody plant species richness, and this relationship held for most mammal guilds even when the influence of environment and spatial autocorrelation had been accounted for. However, the effect of woody plant species richness on the richness of aquatic/fossorial species almost disappeared after controlling for environment, suggesting that the congruence in species richness patterns between these two groups results from similar responses to the same environmental variables. For many mammal guilds, the relative role of environmental predictors as measured by standardized partial regression coefficients changed depending on whether non‐spatial single‐predictor regressions, non‐spatial SEMs, or spatial regressions were used. Main conclusions Woody plants are important determinants of the species richness of most mammal guilds in southern Africa, even when controlling for environment and residual spatial autocorrelation. Environmental correlates with animal species richness as measured by simple correlations or single‐predictor regressions might not always reflect direct effects; they might, at least to some degree, result from indirect effects via woody plants. Interpretations of the strength of the effect of environmental variables on mammal species richness in southern Africa depend largely on whether spatial or non‐spatial models are used. We therefore stress the need for caution when interpreting environmental ‘effects’ on broad‐scale patterns of species richness if spatial and non‐spatial methods yield contrasting results.     

Morphological and metrical comparison of San and Central Sotho dentitions from southern Africa

Comparative morphological and metrical study of San and Central Sotho dentitions indicates that the teeth of the two samples are significantly different from one another. The San dental complex contains traits that add mass to the occlusal surface of microdontic dentitions: moderate low-grade UI1 (13.5%) and UI2 shoveling (24.7%), high Bushman canine (43.1%), fairly low UM2 hypocone reduction (23.3%), high UM2 cusp 5 (55.6%), high LM1 cusp 7 (35.2%), LM1 distal trigonid crest (7.1%), and LM2 deflecting wrinkle (5.3%), lack of reduction of LM1 and LM2 cusp number, in the presence of very low UM1 Carabelli's trait (6.7%) and high LM2 Y-groove (86.3%). Culturally, males occasionally exhibit filed UI1 and females are missing LI1. Conversely, mesodontic Central Sotho dentitions display a more simplified morphology, with the exception of moderately high incidence of UM1 Carabelli's trait (41.0%) and very high LM1 cusp 7 (71.3%). Discriminant analysis of mesiodistal and buccolingual diameters and tooth crown surface area data for the left maxillary teeth supports classification of San dentitions as microdont and Central Sotho dentitions as mesodont. Additionally, metrical analysis indicates that San teeth are more sexually dimorphic than are those of Central Sotho.     

Questions of khoesan continuity: Dental affinities among the indigenous holocene peoples of South Africa

The present report follows up on the findings of previous research, including recent bioarchaeological study of well‐dated Khoesan skeletal remains, that posits long term biological continuity among the indigenous peoples of South Africa after the Pleistocene. The Arizona State University Dental Anthropology System was used to record key crown, root, and intraoral osseous nonmetric traits in six early‐through‐late Holocene samples from the Cape coasts. Based on these data, phenetic affinities and an identification of traits most important in driving intersample variation were determined using principal components analysis and the mean measure of divergence distance statistic. To expand biological affinity comparisons into more recent times, and thus preliminarily assess the dental impact of disproportionate non‐Khoesan gene flow into local peoples, dental data from historic Khoekhoe and San were also included. Results from the prehistoric comparisons are supportive of population continuity, though a sample from Matjes River Rockshelter exhibits slight phenetic distance from other early samples. This and some insignificant regional divergence among these coastal samples may be related to environmental and cultural factors that drove low‐level reproductive isolation. Finally, a close affinity of historic San to all samples, and a significant difference of Khoekhoe from most early samples is reflective of documented population history following immigration of Bantu‐speakers and, later, Europeans into South Africa. Am J Phys Anthropol 155:33–44, 2014. © 2014 Wiley Periodicals, Inc.     

Impact of land use on vegetation composition, diversity, and selected soil properties of wetlands in the southern Drakensberg mountains, South Africa

Wetlands provide the ecosystem services of enhancing water quality, attenuating floods, sequestrating carbon and supporting biodiversity. In southern Africa, the pattern and intensity of land use is influenced by whether land tenure is public (state), private (individual ownership), or communal (shared agricultural and grazing resources). The influence of land tenure and its associated use on service provision was compared for communal tenure (grazing, maize production), wildlife conservation, and commercial agriculture (grazing, planted pastures) in the southern Drakensberg. Ordination analyses revealed that oxbow marshes, hill slope seepages and hygrophilous grasslands, the main hydro-geomorphic units, supported distinct plant communities that differed in their response to land use because of wetness or slope. Oxbows, uncultivated because of wetness, were inherently species poor with few exotics. Composition of hill slope seepages, uncultivated because of saturated slopes, varied among tenure types most likely in relation to grazing pressure. Seepages were threatened by the exotic invasive Rubus cuneifolius. Eighty-five percent of hygrophilous grassland had been cultivated by 1953, most of which was subsequently abandoned to secondary grassland. Primary hygrophilous grassland and hill slope seepages were the main repository for indigenous plant diversity, while communal maize fields supported a diverse mixture of mainly exotic species. Soil carbon concentrations decreased from oxbows to pastures, seepages, primary hygrophilous grassland, secondary grassland, and maize on former grassland (7.0, 4.1, 4.0, 3.5, 2.4, and 1.7%, respectively). The pattern for total soil nitrogen and sulphur were the same. Cultivation of hygrophilous grassland was estimated to have reduced soil carbon stocks to 69% of pre-settlement levels by 1953 (∼150 years BP). Stocks then increased by 8% to 2001 following crop abandonment. Cultivation has impaired water quality enhancement and flood attenuation because of greater amounts of bare ground and shorter vegetation. Further improvement of ecosystem services will depend on the influence of socio-economic factors on communal cropping.     

Parapsylla, a Gondwanan element in the psyllid fauna of southern Africa (Homoptera)

The genus Parapsylla (Homoptera: Psylloidea) is redescribed and placed in the Diaphorininae of the Family Aphalaridae. Its relationships within this subfamily are discussed. The genus Agmapsylla syn. nov. is placed into the synonymy of Parapsylla , and Pennavena syn. nov. and Eudiaphorina syn. nov. are placed into the synonymy of Diaphorina. The eight known species of Parapsylla are distributed in southern Africa and upland areas of East Africa. Host plant relationships are not clearly established but the genus appears to be associated with species of Maytenus (Celastraceae), Olinia (Oliniaceae) and possibly Olea (Oleaceae) and Syzygium (Myrtaceae). Parapsylla relicta syn. nov, and A. aureus syn. nov. are placed into the synonymy of Arytaina capensis. Parapsylla capensis comb. nov. is transferred from Arytaina, Parapsylla valens comb. nov. is transferred from Diaphorina , and the following new species are described: P. angolensis sp. nov., P. eafra sp. nov., P. huila sp. nov., P. marginipennis sp. nov., P. rufa sp. nov. and P. theroni sp. nov.     

The influence of resprouting forest canopy species on richness in Southern Cape forests, South Africa

We investigated the relationship between species richness and numbers and types of individuals and species present in forests with different physiognomies in the southern Cape Province, South Africa. Data were collected from three different ‘plot’ types: 400 m², canopy‐scaled (plot length is directly proportional to canopy height) and per 100 individuals closest to a point. Plots were designed to control for the effect of scale on local richness. Canopy species richness was inversely proportional to the abundance of resprouting species. The strength of the relationship between the abundance of resprouters and canopy species richness increased progressively from the 400 m² plots to the canopy‐scaled plots and finally to the plots of 100 individuals. Resprouter abundance decreased, while canopy species richness increased, with increasing canopy height. Resprouters are able to retain their in situ position in the forests for longer periods of time than do reseeders. This reduces individual and species turnover, thus reducing species richness in resprouter‐dominated forests.     

Species richness and evenness respond to diverging land‐use patterns – a cross‐border study of dry tropical woodlands in southern Africa

Cross‐border studies offer unique situations to study the impact of different land‐use regimes on ecosystems. Along the Angolan and Namibian border formed by the Okavango River, the environmental conditions and traditional land‐use practises are the same on either side of the river. However, decades of civil war in Angola led to a stagnant development while political stability in Namibia fostered a recent socio‐economic transformation. We investigated the impact of spatially diffuse land use on plant diversity of the dry tropical woodlands covering the vast, sandy hinterlands of the river. As accessibility is the major factor governing land use, we used distance to road as a proxy for land‐use intensity. Based on 58 vegetation plots sized 20 m × 50 m, we showed that species richness increased with distance to road in Angola while in Namibia it remained constant on a lower level. Evenness showed an inverse pattern to species richness and Shannon diversity index showed no response. Analysing diversity patterns according to life forms revealed that these patterns are primarily driven by woody species. The study showed that spatially diffuse land use has a measurable effect on plant diversity and illustrates that roads act as vectors of change.     

Status of succulent shrubs in the southern Namib Desert, Succulent Karoo Biome

The ratio of dead to alive succulent shrubs as an indicator of turnover was investigated to test whether the accepted notion of rapid turnover rates and cyclic succession in the Succulent Karoo Biome are applicable in the southern Namib. Based on counts of dead and alive plants, twelve species in two habitat types were investigated. These short‐term data which could not incorporate recruitment rates or changes over time, generated, however, some hypotheses. (i) Rapid turnover rates are likely not supported by all succulent plants at the Succulent Karoo Biome's northern boundary. With the exception of one species, mortality rates in succulent shrubs across a range of plant functional types were lower than reported in other parts of the biome. (ii) Sand plains appeared to support some transient species, indicating that there may be differences in vegetation dynamics between habitats. (iii) Species of different plant functional types showed no differences in ratio of dead to alive plants related to habitat. These species may have broad ecological tolerance limits and are perhaps less affected by changes in their environment. (iv) Shrubby Mesembryanthemaceae have high turnover rates and hence a short live span in the investigated area, but are longer lived than elsewhere in the Succulent Karoo Biome. As these hypotheses have implications for management and conservation of succulent species in this global biodiversity hotspot, a detailed evaluation of vegetation turnover, balancing mortality versus recruitment, should be investigated over a longer time span.     

Amphibians and squamates from the middle Eocene of Namibia,with comments on pre-Miocene anurans from Africa

Three middle Eocene localities (Silica North, Silica South, Black Crow) recently discovered in Namibia have produced terrestrial faunas that rank among the few known from the period of insulation of Africa (Aptian-early Miocene). Collectively, the three localities have yielded anuran amphibians (one pipid frog, the earliest assemblage [three taxa] of ranoid frogs in Africa, one indeterminate family) and squamate reptiles (an amphisbaenian ‘lizard’, a snake that likely represents a colubroid, and two indeterminate ‘lizards’). These Eocene faunas suggest that ranoids, colubroids and African pipids are autochthonous to Africa. However, whereas pipids are vicariants inherited from West Gondwana, ranoids and colubroids (if really autochthonous) originated in Africa from unknown stems. Silica North and Silica South correspond to aquatic environments, permanent fresh water being present in the first locality; the environment of Black Crow was drier.     

The Roggeveldberge — Notes on a botanically hot area on a cold corner of the southern Great Escarpment, South Africa

Despite the Roggeveldberge comprising the montane heart of the celebrated Hantam-Roggeveld Centre of Plant Endemism (HRC), this section of the southern Great Escarpment in South Africa is botanically poorly known. A detailed physical, historical and phytogeographical overview of the Roggeveldberge is thus presented, and a checklist of 513 plant taxa is provided as a contribution towards a more complete flora for the Roggeveld-Komsberg Escarpment. The HRC is considered in detail, including various delimitations, and all species purported to be endemic to the HRC are reviewed and separated into actual endemics, near-endemics and species incorrectly considered as endemic.     

Geographical affinities of the Cape flora, South Africa

Aim The flora characteristic of the Cape Floristic Region (CFR) is dominated by a relatively small number of clades that have been proposed as ‘Cape clades’. These clades have variously been suggested to have African or Austral affinities. Here we evaluate the support for these conflicting hypotheses. In addition, we test the hypothesis that these clades share a common time of differentiation from their geographical neighbours. Location The Cape Floristic Region, South Africa Methods We use both published and unpublished phylogenetic information to investigate the geographical sister areas of the Cape clades as well as the timing and the direction of biogeographical disjunctions. Results Almost half of the Cape clades for which unambiguous sister areas could be established show a trans‐Indian Ocean disjunction. The earliest trans‐Indian Ocean disjunction dates from 80 Ma. Other disjunctions date from various times in the Cenozoic, and we suggest that the process of recruiting lineages into the Cape flora might be ongoing. Relatively few Cape clades show a sister relationship with South America and tropical Africa, despite their relative geographical proximity. Numerous Cape clades contain species also found on tropical African mountains; in all cases tested, these species are shown to be embedded within the Cape clades. While many Cape clades show a relationship with the Eurasian temperate flora, this is complicated by their presence in tropical Africa. The single case study addressing this to date suggests that the Cape clade is nested within a European grade. Main conclusions Although many Cape clades show Austral rather than African relationships, there are numerous other patterns suggestive of a cosmopolitan flora. This spatial variation is echoed in the temporal data, from which, although there is wide variance around the dates of disjunctions, it is clear the Cape flora has been assembled over a long time period. There is no simple hypothesis that can account for the geographical sources of the currently distinctive Cape flora. The phylogenetic positions of Afromontane members of Cape clades suggest a history of dispersal from the CFR, rather than the reverse.     

Species diversity and distribution of lepidopteran stem borers in South Africa and Mozambique

Country‐wide surveys of lepidopteran stem borers in wild host plants were undertaken between 2006 and 2009 in South Africa and 2005 and 2010 in Mozambique. A total of 4438 larvae were collected from 65 wild host plants in South Africa and 1920 larvae from 30 wild host plants in Mozambique. In South Africa and Mozambique, 50 and 39 stem borer species were recovered, respectively, with four new species and two new genera among noctuids. Less than 5% of the total number of species collected are considered to be economically important in Africa. These species were Busseola fusca (Fuller) (Noctuidae), Chilo partellus (Swinhoe) (Crambidae) and Sesamia calamistis Hampson (Noctuidae). Data from this study and others in East Africa on the very low abundance of stem borers in wild host plants question the putative role of wild host plants as reservoir for stem borer pests. One new host plant family (Prioniaceae), as well as 24 and 13 wild hosts from South Africa and Mozambique respectively, was added to the list of known hosts in Africa.     

The radiation of the Cape flora, southern Africa

The flora of the south-western tip of southern Africa, the Cape flora, with some 9000 species in an area of 90,000 km2 is much more speciose than can be expected from its area or latitude, and is comparable to that expected from the most diverse equatorial areas. The endemism of almost 70%, on the other hand, is comparable to that found on islands. This high endemism is accounted for by the ecological and geographical isolation of the Cape Floristic Region, but explanations for the high species richness are not so easily found. The high species richness is accentuated when its taxonomic distribution is investigated: almost half of the total species richness of the area is accounted for by 33 'Cape floral clades'. These are clades which may have initially diversified in the region, and of which at least half the species are still found in the Cape Floristic Region. Such a high contribution by a very small number of clades is typical of island floras, not of mainland floras. The start of the radiation of these clades has been dated by molecular clock techniques to between 18 million years ago (Mya) (Pelargonium) and 8 Mya (Phylica), but only six radiations have been dated to date. The fossil evidence for the dating of the radiation is shown to be largely speculative. The Cenozoic environmental history of southern Africa is reviewed in search of possible triggers for the radiations, climatic changes emerge as the most likely candidate. Due to a very poor fossil record, the climatic history has to be inferred from larger scale patterns, these suggest large-scale fluctuations between summer wet (Palaeocene, Early Miocene) and summer dry climates (Oligocene, Middle Miocene to present). The massive speciation in the Cape flora might be accounted for by the diverse limitations to gene flow (dissected landscapes, pollinator specialisation, long flowering times allowing much phenological specialisation), as well as a richly complex environment providing a diversity of selective forces (geographically variable climate, much altitude variation, different soil types, rocky terrain providing many micro-niches, and regular fires providing both intermediate disturbances, as well as different ways of surviving the fires). However, much of this is based on correlation, and there is a great need for (a) experimental testing of the proposed speciation mechanisms, (b) more molecular clock estimates of the age and pattern of the radiations, and (c) more fossil evidence bearing on the past climates.