What controls the distribution of tropical forest and savanna?

Forest and savanna biomes dominate the tropics, yet factors controlling their distribution remain poorly understood. Climate is clearly important, but extensive savannas in some high rainfall areas suggest a decoupling of climate and vegetation. In some situations edaphic factors are important, with forest often associated with high nutrient availability. Fire also plays a key role in limiting forest, with fire exclusion often causing a switch from savanna to forest. These observations can be captured by a broad conceptual model with two components: (1) forest and savanna are alternative stable states, maintained by tree cover-fire feedbacks, (2) the interaction between tree growth rates and fire frequency limits forest development; any factor that increases growth (e.g. elevated availability of water, nutrients, CO(2)), or decreases fire frequency, will favour canopy closure. This model is consistent with the range of environmental variables correlated with forest distribution, and with the current trend of forest expansion, likely driven by increasing CO(2) concentrations. Resolving the drivers of forest and savanna distribution has moved beyond simple correlative studies that are unlikely to establish ultimate causation. Experiments using Dynamic Global Vegetation Models, parameterised with measurements from each continent, provide an important tool for understanding the controls of these systems.     

Population structure and spatial pattern of predominant tree species in a pine–oak mosaic mixed forest in the Qinling Mountains,China

This study investigated a typical pine-oak mosaic mixed forest in the Qinling Mountains, China. In the sample plot, the population structure and spatial distribution of the stems were analyzed for the predominant species, to identify the mechanisms of species coexistence and successional trends of the forest. The population structures of all species were bimodally distributed, with young trees (DBH <1 cm) more abundant than older trees. The population structures of Quercus aliena var. acuteserrata was bimodal and rather continuous. However, Pinus tabuliformis and Pinus armandii were discontinuously bimodal, with distinct size deficiencies. Q. aliena var. acuteserrata trees were clumped throughout the plot, although those of P. tabuliformis and P. armandii were clumped at small scales. Notable negative spatial associations between Q. aliena var. acuteserrata and P. tabuliformis were found at almost scales. P. armandii and Q. aliena var. acuteserrata were negatively spatially associated at small scales but positively associated at large scales. Our findings suggest that interspecific competition gradually develops among the predominant tree species. The dynamics of the pine-oak mosaic mixed forest formed a mosaic distribution of uniformly mixed types, with the slow infiltration of Q. aliena var. acuteserrata populations that would eventually establish a pure stand.     

Are cloud forest tree structure and environment related in the Venezuelan Andes?

Cloud forest vegetation structure and composition were studied in the Venezuelan Andes at three sites in Mérida State. Although the sites are within 10 to 30 km of each other, climatic, geologic and topographic differences are remarkable. The main purpose of the study was to determine the relationship of specific environmental variables to forest vegetation characteristics, including basal area, tree height, density and diversity, and leaf area index (LAI). At 51 plots, all trees' diameter at breast height >10 cm were recorded and identified. Although the environment at the three sites is distinctive, the tree species composition of the most abundant species was very similar. None of the measured environment variables were significantly correlated with the measured vegetation structure variables, except LAI, which was correlated with slope orientation; LAI showed higher values at south‐facing plots. Tree height was relatively uniform, while basal area was highly variable and reached very high values. Stem densities were in the range reported elsewhere in cloud forests. Multivariate analysis using structure or composition data shows segregation of the plots by site. Principal component analyses by site indicate a minor impact of environmental factors on forest variables. At each site, a particular group of species are correlated with the ordination axes. We conclude that species pools and forest dynamics add to the complexity of the structure of the studied cloud forests.     

Is there a trade-off between species diversity and genetic diversity in forest tree communities?

The two most important components of biodiversity, species diversity and genetic diversity, have generally been treated as separate topics, although a coordination between both components is believed to be critical for ecosystem stability and resilience. Based on a new trait concept that allows for the assessment of genetic diversity across species, the relationship between species diversity and genetic diversity was examined in eight forest tree communities composed of different tree genera including both climax and pioneer species. It was intended to check whether a trade-off exists between the two diversity components as was found in a few studies on animal species.Using several isozyme-gene systems as genetic markers, the genetic diversity across species within each of the tree communities was determined by two measures, the commonly used intraspecific genetic diversity averaged over species and the recently developed transspecific genetic diversity per species. Both data sets were compared with the corresponding community-specific species diversity resulting in a positive relationship between the two diversity components. A statistically significant positive correlation was established between the transspecific genetic diversity per species and the species diversity for three isozyme-gene systems. Beyond that, consistent results were obtained using different parameters of the diversity measure which characterize the total, the effective and the number of prevalent variants. The number of prevalent variants reflected most significantly the non-randomness of the observed diversity patterns.These findings can be explained by the observation that the pioneer tree species reveal a by far higher genetic diversity than the climax tree species, which means that an increase in species diversity, due to the addition of several pioneer species at the expense of one or two climax species, goes along with an increase in the level of genetic diversity. Forest tree communities with the highest degree of species diversity exhibit therefore the highest transspecific genetic diversity per species. This result was discussed with regard to the particular composition and stability of forest tree communities.     

Composition and diversity of bird communities in Swedish farmland–forest mosaic landscapes

CapsuleThe amount of forest (at local and landscape scales) and occurrence of residual habitats at the local scale are shown to be the major factors influencing bird community composition in farmland–forest landscapes in central Sweden.

Aims To investigate the importance of local habitat and landscape structure for breeding birds in farmland–forest landscapes in central Sweden.

Methods Breeding birds were censused at 292 points. A detailed habitat mapping was made within 300 m of the points. Within a 300–600 m radius only two major habitats (forests and arable fields) were identified.

Results Cluster analyses of bird communities identified three site types that also differed in habitat composition: (i) partially forested sites in forested landscapes; (ii) heterogeneous sites with residual habitats in mosaic landscapes; and (iii) field-dominated farmland sites in open landscapes. A total of 19 of 25 farmland bird species (restricted to farmland or using both farmland and forest) had the highest abundance in farmland sites with mosaics of forest and farmland, while only six farmland species had the highest abundance in field-dominated sites. The bird community changed from being dominated by farmland species to being dominated by forest species (common in forest landscapes without farmland) at small proportions (10–20%) of forest at the local scale. A major difference in habitat composition between heterogeneous and field-dominated sites was the occurrence of different residual habitats (e.g. shrubby areas and seminatural grasslands). These habitats seemed to influence bird community composition more than land-use, despite covering <10% of the area. Seminatural grasslands were important for bird community composition and species-richness, but grazing seemed to be less important. Among different land-use types, cereal crops were the least preferred fields. Set-asides with tall vegetation and short rotation coppices were positively associated with species-richness of farmland birds.

Conclusion In general, the composition of the landscape was important for bird community composition, although amount and distribution of forests, occurrence of residual habitats and land-use of fields at the local scale had the strongest influence on bird community composition. The possible implications of these patterns for managing farmland–forest landscapes are discussed.     

What shapes the range edge of a dominant African savanna tree,Colophospermum mopane? A demographic approach

Climate is widely assumed to be the primary process that limits the distribution ranges of plants. Yet, savannas have vegetation not at equilibrium with climate, instead its structure and function are shaped by interactions between fire, herbivory, climate, and vegetation. I use the rich literature of a dominant African savanna woody plant, Colophospermum mopane, to demonstrate that climate and disturbance interact with each demographic stage to shape this species range limits. This synthesis highlights that climate‐based predictions for the range of C. mopane inadequately represents the processes that shape its distribution. Instead, seed bank depletion and rainfall limitation create a demographic bottleneck at the early seedling stage. The legacy of top‐kill from disturbance changes tree stand architecture causing a critical limitation in seed supply. Exposure to top‐kill at all demographic stages causes a vigorous resprouting response and shifts tree architecture from that of 1–2 stemmed tall trees to that of a short multi‐stemmed shrub. The shorter, multi‐stemmed shrubs are below the height threshold (4 m) at which they can produce seeds, resulting in shrub‐dominated landscapes that are effectively sterile. This effect is likely most pronounced at the range edge where top‐kill‐inducing disturbances increase in frequency. The proposed mechanistic, demographic‐based understanding of C. mopane''s range limits highlights the complexity of processes that interact to shape its range edges. This insight serves as a conceptual model for understanding the determinants of range limits of other dominant woody savannas species living in disturbance limited ecosystems.     

Stable carbon isotope ratio of tree leaves, boles and fine litter in a tropical forest in Rondônia, Brazil

Leaves of 208 trees were collected for isotopic analysis together with wood from 36 tree boles and 18 samples of fine litter from a terra-firme forest located at Samuel Ecological Reserve, Rondônia State, in the southwestern Amazon region. The range of δ¹³C values in leaves was from ?28 to ?36‰, with an average (±1 SD) of ?32.1?±?1.5‰, which was more negative than the δ¹³C values of bole samples (?28.4?±?2.0‰) and fine litter (?28.7?±?2.0‰). These values are within the range found for tropical and subtropical forests. Pooling the δ¹³C values for leaf samples from trees of the same height gave averages which were positively correlated with plant height at a highly significant level, with a slope of 0.06 and an intercept of ?33.3‰ and a correlation coefficient r ²=0.70 (P<0.001).     

Does spatial distribution of tree size account for spatial variation in soil respiration in a tropical forest?

We explored the relationship between soil processes, estimated through soil respiration (R _soil ), and the spatial variation in forest structure, assessed through the distribution of tree size, in order to understand the determinism of spatial variations in R _soil in a tropical forest. The influence of tree size was examined using an index (I _c ) calculated for each tree as a function of (1) the trunk cross section area and (2) the distance from the measurement point. We investigated the relationships between I _c and litterfall, root mass and R _soil , respectively. Strong significant relationships were found between I _c and both litterfall and root mass. R _soil showed a large range of variations over the 1-ha experimental plot, from 1.5 to 12.6 g_C m^?2 d^?1. The best relationship between I _c and R _soil only explained 17% of the spatial variation in R _soil . These results support the assumption that local spatial patterns in litter production and root mass depend on tree distribution in tropical forests. Our study also emphasizes the modest contribution of tree size distribution–which is mainly influenced by the presence of the biggest trees (among the large range size of the inventoried trees greater than 10 cm diameter at 1.30 m above ground level or at 0.5 m above the buttresses)–in explaining spatial variations in R _soil .     

What is the optimal number of leaves when measuring leaf area of tree species in a forest community?

植物形态性状叶面积简单易测, 能够反映植物对环境的适应与响应, 指示生态系统的功能与过程。在野外测定叶面积时, 叶片取样数量往往采用约定俗成的10-20片, 但到底采集多少叶片才是最优和最具代表性, 却少有探究。该研究以浙江金华山常绿落叶阔叶混交林的优势树种木荷(Schima superba)与枫香树(Liquidambar formosana)为研究对象, 通过对5个胸径等级植株和每个植株6个方位开展大批量叶片取样(>2 500个), 分析两个树种的叶面积变异特征, 探讨叶片取样数量为多少才能最代表该森林类型的叶片大小性状规律。结果表明, 常绿乔木木荷平均叶面积与变幅均小于落叶乔木枫香树。木荷叶面积与胸径无显著相关性, 而枫香树叶面积与胸径有较显著相关性, 但两个树种均在中胸径等级(15-20 cm)差异不显著; 两个树种的叶面积与采样方位无显著相关性, 但在东、西和底部的差异不显著。因此, 综合考虑代表性与野外可操作性, 叶片采集首选中胸径成树的底部叶片。随机抽样统计可知, 树木叶面积测定的最适叶片采集数量因物种而异, 木荷的最适叶片采集数量为40, 而枫香树最少为170片。因此, 在叶面积测定时, 叶片采集的数量应该不能只局限在10-20片, 在人力、物力和时间等条件允许的情况下, 应该尽可能多地测定较多叶片的叶面积。     

How predictable are the responses of ant and dung beetle assemblages to patch and landscape attributes in fragmented tropical forest landscapes?

Landscape and Ecological Engineering - One of the most effective means of evaluating the effects of habitat loss and landscape configuration is to assess the response of bioindicators. The present...     

Can neutral theory predict the responses of Amazonian tree communities to forest fragmentation?

We use Hubbell's neutral theory to predict the impact of habitat fragmentation on Amazonian tree communities. For forest fragments isolated for about two decades, we generate neutral predictions for local species extinction, changes in species composition within fragments, and increases in the probability that any two trees within a fragment are conspecific. We tested these predictions using fragment and intact forest data from the Biological Dynamics of Forest Fragments Project in central Amazonia. To simulate complete demographic isolation, we excluded immigrants--species absent from a fragment or intact forest plot in the initial census but present in its last census--from our tests. The neutral theory correctly predicted the rate of species extinction from different plots as a function of the diversity and mortality rate of trees in each plot. However, the rate of change in species composition was much faster than predicted in fragments, indicating that different tree species respond differently to environmental changes. This violates the key assumption of neutral theory. When immigrants were included in our calculations, they increased the disparity between predicted and observed changes in fragments. Overall, neutral theory accurately predicted the pace of local extinctions in fragments but consistently underestimated changes in species composition.     

Are the assemblages of tree pollination modes being recovered by tropical forest restoration?

Questions

Do the assemblages of pollination modes in restored (tree plantings) and secondary (naturally regenerated) forests change in comparison to primary forests, and how do these assemblages relate to species turnover at regional scale?

Location

Southeast region of Brazil.

Methods

We classified tree species found in a total of 40 forest sites (18 primary, 11 restored, 11 secondary) according to pollination mode, based on the literature. We calculated and compared functional dissimilarity distances, amounts of species and accumulated abundance of pollination modes, and functional indices of richness and evenness between forest types.

Results

Functional dissimilarity distances were much smaller than species dissimilarity distances within forest types (mean <20%, >80%, respectively), indicating a small variation in pollination modes between sites. Functional indices of richness and evenness did not differ between forest types. However, significant changes were found in the species and abundance proportions of several pollination modes. Primary forests were characterized by the predominance of generalized insect‐pollinated species, followed by secondary proportions of bee, wind and moth pollination; other pollination modes were underrepresented. In restored forests, reductions were found in generalized insect, moth, wind, fly, pollen‐consuming insect and very‐small insect pollination, whereas the species pollinated by bees and bats more than doubled. Smaller changes were found among secondary forests, including reductions in moth, fly and fig‐wasp pollination, whereas there were incremental changes in bee, beetle, big animal and small insect pollination.

Conclusions

Our results indicate a rather stable assemblage of pollination modes and also high ecological redundancy among trees regardless of the species replacement at the regional scale. Major changes among restored forests are probably in response to larger disturbance effects and/or restoration practices conducted in these sites. In contrast, smaller changes among secondary forests could be in response to smaller disturbance effects and natural selection processes, and also seem to suggest that highly resilient degraded areas are more likely to recuperate their functional diversity through natural regeneration alone. In both cases, however, efforts to recover such patterns should be encouraged to avoid possible negative effects in plant–pollinator interactions.     

Flooding × tree fall gap interactive effects on blackwater forest floristics and physical structure in the Peruvian Amazon

To better understand how flooding and tree fall structure forests in the Amazon, I sampled vegetation plots within three blackwater forests (least flooded, medium flooded, highest flooded) and their tree fall gaps in the Peruvian Amazon. I found (1) increased flooding decreased family richness in the closed-canopy forests but increased it in their gaps, with no trends for no. of unique species, (2) flooding decreased stem size everywhere as did the number of stems as size increased especially for larger stems, (3) Green's index showed clumping only for least-flooded forests with the closed-canopy forest showing more than its tree fall gap, and (4) both flooding and tree fall gap creation decreased canopy coverage perhaps as an additive effect. Further among the stem size classes, only the smallest stems were significantly affected by openness and by type of forest, with a significant interaction term where flooding significantly decreased the number of these smaller stems in all forests and their gaps, except those with the highest level of flooding. Also tree fall gaps had significantly more, smaller stems than their forests in the two most-flooded forests, but not in the least-flooded forest. I conclude that flooding is a greater stressor and influence on the structure of these forests than tree fall, and so, in these forests, gradients and disturbances overlap in their traditional roles.     

Near identity of 3′ RNA secondary structure in bromoviruses and cucumber mosaic virus

The 3′ terminal sequences of RNAs 1, 2, 3 and 4 from each of the three bromoviruses (brome mosaic, cowpea chlorotic mottle and broad bean mottle viruses) and also from cucumber mosaic virus display interviral sequence similarity in addition to strong intraviral homology. Interviral similarity is much more evident when RNA secondary, rather than primary, structures are compared. The last 190 bases of the various RNAs can fold into strikingly similar, extensively base-paired secondary structures whose common features are supported by RNA structure mapping. The extreme 3′ end of each viral RNA can base-pair in two distinct configurations. Bromovirus RNA 3s each contain an unusually accessible internal oligo(A) sequence which, in brome mosaic virus at least, is located in the intercistronic noncoding region. Functional implications of these structural features are discussed.     

Selective logging in tropical forests decreases the robustness of liana–tree interaction networks to the loss of host tree species

Selective logging is one of the major drivers of tropical forest degradation, causing important shifts in species composition. Whether such changes modify interactions between species and the networks in which they are embedded remain fundamental questions to assess the ‘health’ and ecosystem functionality of logged forests. We focus on interactions between lianas and their tree hosts within primary and selectively logged forests in the biodiversity hotspot of Malaysian Borneo. We found that lianas were more abundant, had higher species richness, and different species compositions in logged than in primary forests. Logged forests showed heavier liana loads disparately affecting slow-growing tree species, which could exacerbate the loss of timber value and carbon storage already associated with logging. Moreover, simulation scenarios of host tree local species loss indicated that logging might decrease the robustness of liana–tree interaction networks if heavily infested trees (i.e. the most connected ones) were more likely to disappear. This effect is partially mitigated in the short term by the colonization of host trees by a greater diversity of liana species within logged forests, yet this might not compensate for the loss of preferred tree hosts in the long term. As a consequence, species interaction networks may show a lagged response to disturbance, which may trigger sudden collapses in species richness and ecosystem function in response to additional disturbances, representing a new type of ‘extinction debt’.     

Don’t miss the forest for the trees! Evidence for vertical differences in the response of plant diversity to disturbance in a tropical rain forest

Ecological studies in tropical rain forests traditionally focus on trees above a threshold diameter at breast height (dbh), since ignoring plant species of the other structural compartments is believed to be an acceptable tradeoff between exhaustiveness and effectiveness. However, the consequences of missing species below a threshold dbh value have been largely neglected so far. We evaluated whether the response of species diversity of ≥10-cm dbh trees was similar to the response of other structural ensembles (namely treelets, saplings, and terricolous herbs) in a lowland tropical rain forest, to three disturbance regimes: natural gap dynamics (control), and selective logging with and without additional thinning. We studied forest vegetation composition and diversity in a 20-yr replicated field experiment comprising nine 1 ha permanent plots established in a semi-deciduous rain forest of the Congo Basin and equally distributed among the three treatments. Once corrected by stem density, species richness was similar between logged (20 years since logging) and untouched old-growth forest stands with respect of trees, but higher with respect of treelets. As disturbance intensity increased, species richness increased within sapling layers but decreased within herb layers, while species spatial turnover (beta diversity) increased in both cases. Regarding the parameters of the partitioned rarefaction curves and relative abundance distribution curves, no correlation was found between trees and any of the other structural compartments. Whilst tree and treelet species composition was similar among treatments, the understories still reflected past disturbance intensity, with a strong response of the sapling and herb layers. These results show that ecological studies based solely on tree layers (dbh ≥ 10 cm) are misleading because their response to disturbance cannot be used as a surrogate for the response of other structural ensembles. Long-lasting effects of anthropogenic disturbance on the sapling bank and the herb layer may durably influence the long-term forest dynamics. Since overstory but not understory plant communities have recovered from human disturbances 20 years after silvicultural operations, African tropical rain forest ecosystems may not be as resilient to selective logging as previously thought.     

Is microclimate-driven turnover of dung beetle assemblage structure in regenerating coastal vegetation a precursor to re-establishment of a forest fauna?

We questioned the capability of post-mining rehabilitation and successional changes in coastal vegetation to achieve restoration of dune forest, dung beetle assemblages in the Maputaland Centre of Endemism, South Africa. A repeat 2010 study of structural turnover between dung beetle assemblages across a 33 year successional sere of rehabilitating vegetation and old-growth forest (>73 years) produced comparable results to an earlier study across the 23 year chronosequence of 2000. Despite overlap, three structural patterns along the 33 year chronosequence were associated with specific stages of vegetation succession and their characteristic microclimates as in 2000. Although species biased to unshaded habitat dominated the earliest succession, there was rapid re-establishment of dominance by shade-associated forest species. In concert with progression from unshaded, post-mining vegetation to strongly shaded, early successional, Acacia shrub-woodland, there was an initial increase in similarity of the dung beetle fauna (species-poor, low abundance) to that in strongly-shaded forest (also species-poor, low abundance). However, in concert with decreasing shade cover in late successional woodland, the dung beetle fauna became species-rich with high abundance so that the early successional trajectory of increasing similarity to forest fauna either levelled off to a plateau (species in 2000; abundance in 2010) or declined (species in 2010, abundance in 2000). It remains to be seen if gaps forming in the oldest Acacia woodland permit forest tree saplings of the exposed understorey to recreate a forest canopy that would be tracked by dung beetles to re-establish a typically species-poor, deep shade, forest assemblage with low abundance.