Bird diversity along elevational gradients in the Andes of Colombia: area and mass effects

Aim The decrease in species richness with increasing elevation is a widely recognized pattern. However, recent work has shown that there is variation in the shape of the curve, such that both negative monotonic or unimodal patterns occur, influenced by a variety of factors at local and regional scales. Discerning the shape of the curve may provide clues to the underlying causes of the observed pattern. At regional scales, the area of the altitudinal belts and mass effects are important determinants of species richness. This paper explores the relationship between bird species richness, elevation, mass effects and area of altitudinal zones for birds in tropical mountains. Location The three Andean ranges of Colombia and the peripheral mountain ranges of La Macarena and Santa Marta. Methods Lists of bird species were compiled for altitudinal belts in eastern and western slopes of the three Andean Cordilleras and for La Macarena and Santa Marta. The area of the altitudinal belts was computed from digital elevation models. The effect of area was analysed by testing for differences among altitudinal belts in the slopes and intercepts of the species‐area relationships. Mass effects were explored by separately analysing two sets of species: broadly distributed species, i.e. lowland species whose distributions extend into the Andes, and tropical Andean species, i.e., species that evolved in the Andes. Results Plotting total number of species in each altitudinal belt revealed a decline in species richness with elevation. In slopes with a complete elevational gradient from lowlands to mountain peaks, the decrease was monotonic. In internal Andean slopes where the lower elevational belts are truncated, there was a peak at mid elevations. There was a linear relationship between number of species and area of the altitudinal belts. When controlling for area, there were no differences in the number of species among altitudinal belts (500–2600 m), except for the two upper‐elevation zones (2600–3200 and > 3200 m), which had lower species richness. Diversity of widely distributed species declined monotonically with elevation, whereas tropical Andean species exhibited a mid‐elevation peak. Main conclusions A large proportion of the variation in species richness with elevation was explained by area of the altitudinal belts. When controlling for area, species richness remained constant up to 2600 m and then decreased. This pattern contrasts with a previously reported hump‐shaped pattern for Andean birds. Diversity patterns of widely distributed species suggested that immigration of lowland species inflates diversity of lower elevational belts through mass effects. This influence was particularly evident in slopes with complete altitudinal gradients (i.e. connected to the lowlands). Tropical Andean species, in contrast, were more diverse in mid‐elevational belts, where speciation rates are expected to be higher. The influence of these species was more prevalent in internal Andean slopes with no connection to the lowlands. The decline of species richness at high elevations may be related to higher extinction rates and lower resource levels.     

Diversity and distribution of small mammals in the South American Dry Andes

The Andean mountain range has played an important role in the evolution of South American biota. However, there is little understanding of the patterns of species diversity across latitudinal and altitudinal gradients. In this paper, we examine the diversity of small mammals along the South Central Dry Andes (SCDA) within the framework of two contrasting hypotheses: (a) species richness decreases with increasing elevation and latitude; and (b) species richness peaks at altitudinal midpoints (mid‐domain). We explore the composition of the species pool, the impact of species–area relationships and the Rapoport effect (i.e. size of geographic ranges) along latitudinal and elevational gradients. First, we constructed a database of SCDA small mammals. Then, species richness patterns were analysed through generalized models, and species–area relationships were assessed by log–log regressions; the curvilinear method (c = S/Az) was use to compute richness corrected by area size. Lastly, the Rapoport effect was evaluated using the midpoint method. Our results show: (1) a richness of 67 small mammals along the SCDA, of which 36 are endemic; (2) a hump‐shaped pattern in species richness along elevation and latitudinal gradients; (3) a species–area relationship for both gradients; (4) endemic species corrected by area present a strong and positive relationship with elevation; (5) a Rapoport effect for the latitudinal ranges, but no effect across the elevational gradient; and (6) a major species turnover between 28° and 30° south latitude. This is the first study quantifying the diversity of small mammals encompassing the central Andean region. Overall, our macrogeographic analysis supports the previously postulated role of the Andes in the diversification of small mammals (i.e. in situ cladogenesis) and highlights some basic attributes (i.e. anatomy of geographic ranges; species–area relationships) when considering the consequences of climate change on biodiversity conservation of mountain ecosystems.     

Elevational diversity patterns of small mammals on Mount Kinabalu, Sabah, Malaysia

1 Diversity patterns of small mammals were studied along an elevational transect on Mount Kinabalu, the highest mountain in South‐east Asia, utilizing data from previously existing sources and a new field study. A mark‐and‐release study (conducted during wet and dry seasons between November 1994 and April 1995) resulted in captures of 12 small mammal species, including two species of squirrels, two tree shrews, seven murid rodents and one gymnure. 2 Based on data compiled from this survey, museum specimens, and published and unpublished literature (analysed by locally weighted sums of squares and quadratic polynomial regressions), species richness of small mammals formed a middle elevation bulge, highest at about 1200–1400 m and declining at lower and higher elevations. Trapping during two seasons did not change the assessment of the pattern. 3 A cluster analysis of these data indicated that there are two elevationally associated faunas, one in the highlands and another in the lowlands. The transition between these two assemblages is at 1700–1800 m elevation. The lowland faunal assemblage has the highest number of species, with maximum species richness at about 1300 m for total small mammal species, about 1200 m for arboreal species and about 1400 m for terrestrial species. 4 The areas where much overlapping of species occurs are the elevations where climate and vegetation change rapidly from lowland to montane types. Tree species, gymnosperms, orchids and ferns showed a similar curvilinear pattern along the same elevational gradient, with maximum species richness at about 1400–1500 m. Temperature declined progressively with increasing elevation, but rainfall and humidity reached their highest levels at about 1700 m. 5 Maximum diversity of small mammals thus occurred at the elevation where a highland and a lowland assemblage overlapped, where several types of plants reached their maximum diversity, and where rainfall and humidity reached their maxima. Similar patterns have been documented for small mammals, plants, and climate at sites scattered in Indo‐Australia from Taiwan to New Guinea.     

Bryophyte Species Richness and Composition along an Altitudinal Gradient in Gongga Mountain,China

An investigation of terrestrial bryophyte species diversity and community structure along an altitudinal gradient from 2,001 to 4,221 m a.s.l. in Gongga Mountain in Sichuan, China was carried out in June 2010. Factors which might affect bryophyte species composition and diversity, including climate, elevation, slope, depth of litter, vegetation type, soil pH and soil Eh, were examined to understand the altitudinal feature of bryophyte distribution. A total of 14 representative elevations were chosen along an altitudinal gradient, with study sites at each elevation chosen according to habitat type (forests, grasslands) and accessibility. At each elevation, three 100 m × 2 m transects that are 50 m apart were set along the contour line, and three 50 cm × 50 cm quadrats were set along each transect at an interval of 30 m. Species diversity, cover, biomass, and thickness of terrestrial bryophytes were examined. A total of 165 species, including 42 liverworts and 123 mosses, are recorded in Gongga mountain. Ground bryophyte species richness does not show any clear elevation trend. The terrestrial bryophyte cover increases with elevation. The terrestrial bryophyte biomass and thickness display a clear humped relationship with the elevation, with the maximum around 3,758 m. At this altitude, biomass is 700.3 g m⁻² and the maximum thickness is 8 cm. Bryophyte distribution is primarily associated with the depth of litter, the air temperature and the precipitation. Further studies are necessary to include other epiphytes types and vascular vegetation in a larger altitudinal range.     

Changes in structure and composition of evergreen forests on an altitudinal gradient in the Venezuelan Guayana shield

There have been several ecological studies in forests of the Guayana Shield, but so far none had examined the changes in structure and composition of evergreen forests with altitude. This study describes and analyzes the structure, species composition and soil characteristics of forest stands at different altitudinal zones in Southeastern Venezuelan Guayana, in order to explain the patterns and the main factors that determine the structure and composition of evergreen forests along the altitudinal gradient. Inventories of 3 948 big (>10cm DBH) and 1 328 small (5-10cm DBH) woody stems were carried out in eleven plots, ranging from 0.1 to 1.0ha, along a 188km long transect with elevations between 290 and 1 395masl. It has been found that 1) hemiepihytes become more dominant and lianas reduce their dominance with increasing altitude and 2) the forest structure in the study area is size-dependent. Five families and 12 genera represented only 9% of the total number of families and genera, respectively, recorded troughout the gradient, but the two groups of taxa comprised more than 50% of the Importance Value (the sum of the relative density and the relative dominance) of all measured stems. Moreover, the results suggest that low species richness seems to be associated with the dominance of one or few species. Stand-level wood density (WD) of trees decreased significantly with increasing elevation. WD is an indicator of trees'life history strategy. Its decline suggests a change in the functional composition of the forest with increasing altitude. The Canonical Correspondence Analysis (CCA) indicated a distinction of the studied forests on the basis of their altitudinal levels and geographic location, and revealed different ecological responses by the forests, to environmental variables along the altitudinal gradient. The variation in species composition, in terms of basal area among stands, was controlled primarily by elevation and secondarily by rainfall and soil conditions. There are other interacting factors not considered in this study like disturbance regime, biological interactions, productivity, and dispersal history, which could affect the structure and composition of the forests in the altitudinal gradient. In conclusion, it appears that the structural and floristic variability observed in the studied transect is produced by a combination of different climates and randomly expressed local processes interacting across a complex physical landscape.     

Altitudinal variation of dung beetle (Scarabaeidae: Scarabaeinae) assemblages in the Colombian Andes

Aim We describe the changes in species richness, rarity and composition with altitude, and explore whether the differences in Scarabaeinae dung beetle composition along five altitudinal transects of the same mountain range are related to altitude or if there are interregional differences in these altitudinal gradients. Location Field work was carried out on the eastern slope of the eastern Cordillera, Colombian Andes, between Tamá Peak to the north, in the Tamá National Park (07°23′ N, 72°23′ W) and the San Miguel River (00°28′ N, 77°17′ W) to the south. Methods Sampling was carried out between February 1997 and November 1999 in five regions spanning elevation gradients. In each gradient, six sites were chosen at 250 m intervals between 1000 and 2250 m a.s.l. Results We found a curvilinear relationship between altitude and mean species richness, with a peak in richness at middle elevations. However, the diversity of dung beetle assemblages does not seem to be related to the interregional differences in environmental conditions. The number of geographically restricted species is negatively and significantly related to altitude, with geographically restricted species more frequent at low altitude sites. Ordination delimited the two main groups according to altitude: one with all the highest sites (1750–2250 m a.s.l.) and a second group with the remaining sites (< 1750 m a.s.l.). Analysis of species co‐occurrence shows that these dung beetle assemblages seem to be spatially structured when all sites have the same probability of being chosen. In contrast, the spatial structure of species assemblages seems to be random when the probability of choosing any site is proportional to its altitude. Main conclusions The altitude of sites is the main factor that influences the diversity of these dung beetle assemblages. The peak in species richness at middle elevations, the higher number of geographically restricted species at lower altitudinal levels, and the compositional differences along these mountain gradients seem to result from the mixing at these altitudes of dung beetle assemblages that have different environmental adaptations and, probably, different origins. The relevance of altitude in these assemblages is related to the limited role of these Neotropical high altitude environments as centres of refuge and vicariance for a monophyletic group of warm‐adapted species, for which the vertical colonization of these high mountain environments by lineages distributed at lower altitudes would have been very difficult.     

Elevational diversity gradients, biogeography and the structure of montane mammal communities in the intermountain region of North America

1  Distribution data were assembled for non-volant small mammals along elevational gradients on mountain ranges in the western U.S.A. Elevational distributions in the species-rich Uinta Mountains were compared to those on smaller mountain ranges with varying degrees of historical isolation from the Uintas.
2  For mountain ranges supporting the richest faunas, species richness is highest over a broad low- to mid-elevation zone and declines at both lower and higher elevations. Patterns on other mountain ranges are similar but reflect lower overall species richness.
3  A basic relationship between elevational and geographical distribution is apparent in the occurrence patterns of mammals on regional mountains. Faunas on mountains that have had low levels of historical isolation appear to be influenced by immigration rather than extinction. Species restricted to high elevations in the Uintas are poorly represented on historically isolated mountains and form a portion of local faunas shaped by extinction. Species occurring at lower elevations in the Uintas have better representation on isolated mountains and apparently maintain populations through immigration.
4  Several widespread species show substantial variation in maximum elevation records on different mountain ranges. This involves (1) an upward shift in habitat zones on small, isolated mountain ranges, allowing greater access by low-elevation species, and (2) expansion of certain low- and mid-elevation species into habitats normally occupied by absent high-elevation taxa.
5  Results indicate that montane mammal faunas of the intermountain region have been shaped by broad-scale historical processes, unique regional geography and local ecological dynamics. Parallel examples among mammals of the Philippine Islands suggest that such patterns may characterize many insular faunas.     

Multi-scale altitudinal patterns in species richness of land snail communities in south-eastern France

Aim Species richness is an important feature of communities that varies along elevational gradients. Different patterns of distribution have been described in the literature for various taxonomic groups. This study aims to distinguish between species density and species richness and to describe, for land snails in south‐eastern France, the altitudinal patterns of both at different spatial scales. Location The study was conducted on five calcareous mountains in south‐eastern France (Etoile, Sainte Baume, Sainte Victoire, Ventoux and Queyras). Methods Stratified sampling according to vegetation and altitude was undertaken on five mountains, forming a composite altitudinal gradient ranging from 100 to 3100 m. Visual searching and analysis of turf samples were undertaken to collect land snail species. Species density is defined as the number of species found within quadrats of 25 m². Species richness is defined as the number of species found within an elevation zone. Different methods involving accumulation curves are used to describe the patterns in species richness. Elevation zones of different sizes are studied. Results Eighty‐seven species of land snails were recovered from 209 samples analysed during this study. Land snail species density, which can vary between 29 and 1 species per 25 m², decreases logarithmically with increasing altitude along the full gradient. However, on each mountain separately, only a linear decrease is observable. The climatic altitudinal gradient can explain a large part of this pattern, but the great variability suggests that other factors, such as heterogeneity of ground cover, also exert an influence on species density. The altitudinal pattern of species richness varies depending on the spatial resolution of the study. At fine resolution (altitudinal zones of 100 m) land snail species richness forms a plateau at altitudes below 1000 m, before decreasing with increasing altitude. At coarse resolution (altitudinal zones of 500 and 1000 m) the relationship becomes linear. Main conclusions This study reveals that land snail species density and land snail species richness form two different altitudinal patterns. Species density exhibits strong variability between sites of comparable altitude. A large number of samples seem necessary to study altitudinal patterns of species density. Species density decreases logarithmically with increasing altitude. Above a critical altitudinal threshold, this decrease lessens below the rate seen in the first 1500 m. Different methods exist to scale‐up species density to species richness but these often produce different patterns. In this study, the use of accumulation curves has yielded a pattern of species richness showing a plateau at low altitude, whereas simple plotting of known altitudinal ranges from single mountains would have produced stronger mid‐altitudinal peaks. This study shows that not only factors such as temperatures and habitat heterogeneity, but also an ecotone effect, are responsible for the observed patterns.     

Elevational patterns of species richness, range and body size for spiny frogs

Quantifying spatial patterns of species richness is a core problem in biodiversity theory. Spiny frogs of the subfamily Painae (Anura: Dicroglossidae) are widespread, but endemic to Asia. Using spiny frog distribution and body size data, and a digital elevation model data set we explored altitudinal patterns of spiny frog richness and quantified the effect of area on the richness pattern over a large altitudinal gradient from 0-5000 m a.s.l. We also tested two hypotheses: (i) the Rapoport's altitudinal effect is valid for the Painae, and (ii) Bergmann's clines are present in spiny frogs. The species richness of Painae across four different altitudinal band widths (100 m, 200 m, 300 m and 400 m) all showed hump-shaped patterns along altitudinal gradient. The altitudinal changes in species richness of the Paini and Quasipaini tribes further confirmed this finding, while the peak of Quasipaini species richness occurred at lower elevations than the maxima of Paini. The area did not explain a significant amount of variation in total, nor Paini species richness, but it did explain variation in Quasipaini. Five distinct groups across altitudinal gradient were found. Species altitudinal ranges did not expand with an increase in the midpoints of altitudinal ranges. A significant negative correlation between body size and elevation was exhibited. Our findings demonstrate that Rapoport's altitudinal rule is not a compulsory attribute of spiny frogs and also suggest that Bergmann's rule is not generally applicable to amphibians. The study highlights a need to explore the underlying mechanisms of species richness patterns, particularly for amphibians in macroecology.     

Spatial diversity patterns of Pristimantis frogs in the Tropical Andes

Although biodiversity gradients have been widely documented, the factors governing broad‐scale patterns in species richness are still a source of intense debate and interest in ecology, evolution, and conservation biology. Here, we tested whether spatial hypotheses (species–area effect, topographic heterogeneity, mid‐domain null model, and latitudinal effect) explain the pattern of diversity observed along the altitudinal gradient of Andean rain frogs of the genus Pristimantis. We compiled a gamma‐diversity database of 378 species of Pristimantis from the tropical Andes, specifically from Colombia to Bolivia, using records collected above 500 m.a.s.l. Analyses were performed at three spatial levels: Tropical Andes as a whole, split in its two main domains (Northern and Central Andes), and split in its 11 main mountain ranges. Species richness, area, and topographic heterogeneity were calculated for each 500‐m‐width elevational band. Spatial hypotheses were tested using linear regression models. We examined the fit of the observed diversity to the mid‐domain hypothesis using randomizations. The species richness of Pristimantis showed a hump‐shaped pattern across most of the altitudinal gradients of the Tropical Andes. There was high variability in the relationship between area and species richness along the Tropical Andes. Correcting for area effects had little impact in the shape of the empirical pattern of biodiversity curves. Mid‐domain models produced similar gradients in species richness relative to empirical gradients, but the fit varied among mountain ranges. The effect of topographic heterogeneity on species richness varied among mountain ranges. There was a significant negative relationship between latitude and species richness. Our findings suggest that spatial processes partially explain the richness patterns of Pristimantis frogs along the Tropical Andes. Explaining the current patterns of biodiversity in this hot spot may require further studies on other possible underlying mechanisms (e.g., historical, biotic, or climatic hypotheses) to elucidate the factors that limit the ranges of species along this elevational gradient.     

Species Diversity and Elevational Distribution of Amphibians in the Xianxialing and Wuyishan Mountain Ranges,Southeastern China

The species diversity and altitudinal distribution of amphibians along an elevational gradient of 200.1 600 m in the Xianxialing and Wuyishan Mountain Ranges in Southeastern China were investigated through time-constrained visual surveys along 32 transect lines in 9 survey areas, in which the habitat types were also recorded. A total of 27 amphibian species belonging to 19 genera, 7 families, and 2 orders were found. The species diversity of the amphibians plateaued at low elevation, and the altitudinal boundary of their distribution was at 800 m.Their species compositions were dissimilar in the two mountain ranges probably because the annual average temperature and annual rainfall were different in both areas. The elevational Rapoport's rule demonstrated that the species range size of the amphibians expanded as the elevation increased in both mountain ranges.The results of the cross-species method supported the rule only when the influence of the low-frequency occurrence probability of an investigated species was excluded, whereas those of the Steven's method strongly corroborated the rule regardless of the incidental occurrence or absence of the species.     

Elevational gradients of small mammal diversity on the northern slopes of Mt. Qilian, China

Aim Small mammal species richness and relative abundance vary along elevational gradients, but there are different patterns that exist. This study reports the patterns of distribution and abundance of small mammals along the broader elevational gradient of Mt. Qilian range. Location The study was conducted in the Mt. Qilian range, north‐western China, from June to August 2001. Methods Removal trapping was conducted using a standardized technique at 7 sites ranging between 1600 and 3900 m elevation within three transects. Correlation, regression and graphical analyses were used to evaluate the diversity patterns along this elevational gradient. Results In total, 586 individuals representing 18 nonvolant small mammal species were collected during 20 160 trap nights. Species composition was different among the three transects with 6 (33%) of the species found only within one transect. Elevational distribution and relative abundance of small rodents showed substantial spatial variation, with only 2 species showing nonsignificant capture frequencies across elevations. Despite these variations, some general patterns of elevational distribution emerged: humped‐shape relationships between species diversity and elevation were noted in all three transects with diversity peaks at middle elevations. In addition, relative abundance was negatively correlated with elevation. Conclusions Results indicate that maximum richness and diversity of nonvolant small mammals occurred at mid‐elevations where several types of plants reached their maximum diversity and primary productivity, and where rainfall and humidity reached a maximum. It is demonstrated that the mid‐elevation bulge is a general feature of at least a large portion of the biota on the Mt. Qilian range.     

Variations of the germinable soil seed bank along the altitudinal gradient in the northwestern Red Sea region

The variations in the size, composition and diversity of the germinable soil seed bank were studied along an altitudinal gradient in the northwestern Red Sea region. The standing vegetation and the germinable seed bank were studied in 58 stands distributed along the altitudinal range from sea level to coastal mountain peaks. The classification of the germinable seed bank by the two-way indicator species analysis (TWINSPAN) led to the recognition of five groups representing different altitudinal ranges. Detrended correspondence analysis (DCA) shows that these groups are clearly distinguished by the first two DCA axes. The results demonstrate significant associations between the floristic composition of the seed bank and the edaphic factors such as CaCO₃, electrical conductivity, organic carbon and soil texture. Species richness, Shannon index of diversity and the size of the germinable seed bank show a hump-shaped curve along the altitudinal gradient, whereas evenness shows a weak increase with elevation increasing. Beta diversity of the seed bank declines with altitude increasing. The similarity between the standing vegetation and the seed bank approaches a U-shaped pattern along the elevation gradient. About 34.8% of the species that constitute the standing vegetation are vulnerable to elimination from the standing vegetation because they are not represented in the seed bank. Soil seed bank can be used for restoration of the vegetation at some of the degraded sites.     

Assessing the origin of Neotropical mountain dung beetle assemblages (Scarabaeidae: Scarabaeinae): the comparative influence of vertical and horizontal colonization

Aims The fauna of mountains and their surrounding regions are likely to be influenced principally by two biological processes: horizontal colonization along similar altitudinal levels by elements originating from lineages inhabiting higher latitudes; and vertical colonization by lineages from the same latitude, but at lower altitudes. We examine whether the expected patterns derived from the latter process can be observed in mountain dung beetle assemblages. Specifically, we study the variation in species composition and richness with altitude in five regions spanning elevation gradients, analysing whether the altitudinal rates of change in the number of species and genera differ, and whether beta‐diversity scores for adjacent sites in each altitudinal gradient are different for species and genera. Location Eastern Cordillera of the Colombian Andes. Methods Field work was carried out in 1997–99 at 27 sites in five regions with elevation gradients, with 10–32 pitfall traps placed in each site. For each altitudinal level the numbers of species and genera were analysed with respect to altitude, and the slope of the linear regression between these variables was calculated. The slope of the curve of the altitude against the cumulative number of species and genera was also calculated for each altitudinal gradient to describe the compositional change between adjacent sites (beta diversity). Species and generic slopes were compared using analysis of covariance. The turnover of species along each altitudinal gradient was measured using presence/absence data and Cody's beta‐diversity index between adjacent pairs of sites. A cluster analysis was used to detect faunistically homogeneous groups of localities. Results Species richness always decreased with altitude, although the slopes did not differ significantly from zero. The number of genera also decreased with increasing altitude, but generally at a significantly slower rate than for species. Variation in the species beta‐diversity scores between altitudinal levels did not follow a homogeneous pattern in the different regions. Two main altitudinal groups of sites with a boundary c. 1500–1750 m a.s.l. can be detected with respect to faunistic similarity. Low‐ and mid‐altitude sites are inhabited by all of the genera (19) and 80% of all species collected. Eight genera and 61 species (c. 60% of the total) are unable to inhabit high‐altitude sites, and only 20 species appear to be exclusive to these high‐altitude environments (> 2000 m a.s.l.). Main conclusions The dominant processes explaining dung beetle composition in the high north‐eastern Andean mountains are probably those of vertical colonization. The limited role of horizontal colonization processes, or colonization from northern or southern lineages, could be a consequence of the isolation and recent geological origin of these mountains.     

The sensitivity of lizards to elevation: A case study from south-eastern Australia

Lizard distribution patterns were examined in relation to elevation in two undulating landscapes. We asked three specific questions: (1) Were different lizard species associated with particular elevations? (2) Did biological attributes of lizards (e.g. body size, colour, reproduction strategy, etc.) vary with elevation? (3) Did species richness of lizards vary with elevation? Field data were collected in two undulating production landscapes in south‐eastern Australia, approximately 100 km to the west of the Australian Capital Territory. Lizards were surveyed using 648 pitfall traps and 3840 m of drift fence. Both study landscapes were divided into 50 m elevation classes. For each elevation class, survey effort, the capture rate of individual species, and species richness were recorded. Correspondence analysis was used to sort lizards according to their altitudinal distribution profiles. Analysis of variance was used to examine if biological attributes of lizards were related to their altitudinal distribution profiles. Generalized linear modelling was used to relate elevation to the capture rate of individual species, and to species richness. Lizard species differed in their altitudinal preferences. Skinks, taxa with a Bassian distribution or distribution restricted to the Great Dividing Range, dark‐bodied species and viviparous species were more likely to inhabit high elevations. Elevation was significantly related to the capture rate of seven species, and ecologically similar species replaced one another as elevation increased. Species richness peaked significantly at intermediate elevations in both landscapes. We conclude that lizards were highly sensitive to elevation. Elevation changes of as little as 50 m may be related to a change in species richness or species composition. Future research should assess if reptiles in other undulating landscapes with a temperate climate are similarly sensitive to elevation. If so, conservation activities in these landscapes need to consider the full spectrum of topographic positions and elevations.     

Dung Beetle and Terrestrial Mammal Diversity in Forests, Indigenous Agroforestry Systems and Plantain Monocultures in Talamanca, Costa Rica

In order to explore the importance of indigenous agroforestry systems for biodiversity conservation, we compared the abundance, species richness and diversity of dung beetles and terrestrial mammals across a gradient of different land use types from agricultural monocultures (plantains) to agroforestry systems (cocoa and banana) and forests in the BriBri and Cabécar indigenous reserves in Talamanca, Costa Rica. A total of 132,460 dung beetles of 52 species and 913 tracks of 27 terrestrial mammal species were registered. Dung beetle species richness and diversity were greatest in the forests, intermediate in the agroforestry systems and lowest in the plantain monocultures, while dung beetle abundance was greatest in the plantain monocultures. The number of mammal tracks per plot was significantly higher in forests than in plantain monocultures, whereas mammal species richness was higher in forests than in either cocoa agroforestry systems or plantain monocultures. Species composition of both terrestrial mammals and dung beetles also varied across the different land use types. Our study indicates that indigenous cocoa and banana agroforestry systems maintain an intermediate level of biodiversity (which is less than that of the original forest but significantly greater than that of plantain monocultures) and provide suitable habitat for a number of forest-dependent species. Although the agroforestry systems appear to serve as favorable habitats for many terrestrial mammal species, their potential positive contribution to mammal conservation is being offset by heavy hunting pressure in the reserves. As in other agricultural landscapes, the conservation of biodiversity in Talamanca will depend not only on maintaining the existing forest patches and reducing the conversion of traditional agroforestry systems to monocultures, but also on reducing hunting pressure.     

Biological diversification in a complex region: a spatial analysis of faunistic diversity and biogeography of the Andes of Colombia

Aim Understanding large‐scale patterns of beta diversity and endemism is essential for ecoregional conservation planning. We present a study of spatial patterns of faunal diversification and biogeographical relationships in the Andean region of Colombia. This region has a great geomorphological complexity, as it is formed by several mountain ranges with different geologic origins. We hypothesize that this complexity results in a high turnover in species composition among subregions. Location The Andean region of Colombia, including the Santa Marta and Macarena mountain ranges. Methods The region was divided into subregions, represented by the eastern and western slopes of each of the three Andean cordilleras, the Cauca and Magdalena valley bottoms, and the peripheral mountain ranges of Perijá, Macarena and Sierra Nevada de Santa Marta. Species lists for five animal taxa (rodents, bats, birds, frogs and butterflies) were compiled for each subregion and similarities in species composition were determined by cluster analysis. To explore biogeographical relationships, species were classified into one of four distributional categories: endemic, tropical Andean, Andean‐Central American and wide continental distribution. Results The highest species richness in the region was found in the Pacific and eastern versants of the Andes, and the lowest in the Cauca and Magdalena valley bottoms. Inter‐Andean slopes were intermediate in species richness. However, when species richness was calculated per unit area, the most diverse regions were the Santa Marta and Macarena ranges, the Cauca Valley watershed and the Pacific slope. Although each taxonomic group had a different branching pattern, dendrograms indicated five common subregional clusterings: (1) Perijá‐Sierra Nevada, (2) the Pacific slope, (3) the eastern Andean slope, (4) the Cauca and Magdalena valley bottoms, and (5) the inter‐Andean slopes. Clustering patterns of inter‐Andean slopes varied among taxa. In birds, bats and rodents, grouping was by opposite slopes of the same valley, whereas frogs were grouped by mountain ranges and butterflies by valleys and their respective slopes. Seventy‐five per cent of species in all taxa were found in less than five subregions. The fauna of the Magdalena and Cauca valley bottoms was composed mostly of lowland species with wide geographical distributions, whereas the cordilleran fauna was mostly restricted to the tropical Andes. Main conclusions The western and eastern versants of the Andes have the highest species richness, but are also the largest subregions. On a per unit area basis, the peripheral ranges (Santa Marta and Macarena) are the richest, followed by the western portion of the Andes (the Cauca Valley watershed and the Pacific versant). Clustering patterns in dendrograms suggest two major patterns of differentiation of the Andean fauna: one elevational (lowlands vs. highlands) and one horizontal (among ranges and/or slopes). Biogeographical affinities of the inter‐Andean valley bottoms are with the lowland faunas of tropical America. In contrast, Andean faunas diversified locally, resulting in the evolution of a large number of endemic species, particularly among the less vagile taxa. Three different main branches of Andean fauna can be recognized, one confined to the Pacific, another to the eastern (Amazonian‐Llanos) versant of the Andes, and the third one composed by the inter‐Andean slopes of the Cauca and Magdalena valleys. The identification of five main biogeographical units in the Andean region of Colombia has important implications for the conservation of the regional biota. Conservation initiatives that seek to preserve representative samples of the regional biodiversity should take into account the patterns of diversification described here, and the evolutionary processes that gave rise to these patterns.     

Richness of cultivable endophytic fungi along an altitudinal gradient in wet forests of Costa Rica

We collected various plant species along an altitudinal gradient ranging from 400 to 2900 m in tropical wet forests of Costa Rica, isolated the associated endophytic fungi, and performed bioinformatic analyses to determine whether changes in altitude are related to changes in their richness and community structure. We showed that the richness of endophytic fungi varied along the altitudinal gradient, being higher in the lowest stratum and decreasing as elevation increases. Each stratum presented a particular composition and diversity of endophytes, although the whole population was characterized by the presence of a few dominant and apparently ubiquitous species, coexisting with a number of less abundant species that presented a more limited host range. These results have important implications for better understanding the role of altitude on the distribution and composition of endophytic fungal populations in tropical forests, but also for maximizing the number and diversity of endophytic isolates in bioprospecting campaigns.     

Altitudinal patterns of seed plant richness in the Gaoligong Mountains, south-east Tibet, China

Elevational patterns of species richness and their underlying mechanisms have long been a controversial issue in biodiversity and biogeographical research, and several hypotheses have been proposed in the past decades. Local and regional studies have suggested that area and geometric constraint are two of major factors affecting the elevational pattern of species richness. In this study, using data of seed plants and their distribution ranges and a Digital Elevation Model data set, we explored altitudinal patterns of seed plant richness and quantified the effects of area and the mid-domain effect (MDE) on the richness patterns in a high mountain area, Gaoligong Mountains (ranging from 215 m to 5791 m a.s.l.) located in south-eastern Tibet, China. The results showed that richness and density (richness/log-transformed area) of seed plants at species, genus, and family levels all showed hump-shaped patterns along the altitudinal gradient. The altitudinal changes in richness of species with three different range sizes (< 500 m, 500–1500 m, and > 1500 m), species of different plant life-forms (trees, shrubs, and herbs), and endemic species further confirmed this finding. Analysis of Generalized Linear Model depicted that although the area of each elevational band was always in high correlation with the species richness, the MDE could explain 84.9%, 33.8%, 83.8%, and 84.5% of the total variation in richness for all species and the three species groups with different range sizes, respectively. This suggests that the MDE significantly influences the patterns of species richness and is likely be stronger for broad-ranged species than for narrow-ranged ones in the Gaoligong Mountains.     

Camera trapping surveys of forest mammal communities in the Eastern Arc Mountains reveal generalized habitat and human disturbance responses

Large-bodied mammals are a rich and diversified faunal group in tropical rainforests. However, knowledge on community size and composition, and on species’ distribution and ecology remains often scant and inadequate against their chronic status of threats. We used camera trapping to detect mammals in the forests of the Eastern Arc Mountains (EAM) of Tanzania, a world renowned region for biodiversity comprised by a series of distinct and ancient mountain ranges partially covered in moist montane forest. We conducted surveys from 2003 to 2011 in eight of the 12 mountain blocks in Tanzania, and, through an overall sampling effort of 11,500 camera days, we detected 43 species. We normalized species richness and species’ detection events by effort, and used these metrics to assess the effect of habitat and human disturbance variables. We found that rarefied richness is positively affected by forest area at the block level, and that richness at forest patch level is also affected by forest area as well as surrounding human density (negative effect). For a subset of 17 species, we found consistent patterns of avoidance or tolerance of human disturbance and forest edges, and increased occurrence in areas at higher elevation, matching the historical forest loss that in most mountains occurred at lower elevation. Our study provides ecological insights that are novel for most species and sites, and reveals a general trend of negative impact of human disturbance on both community size and species’ relative abundance. Increased protection of the EAM forests in Tanzania is of urgent importance for the persistence of diversified mammal communities.