Genetic variability and size estimates of the Eurasian otter (Lutra lutra) population in the Bohemian Forest Ecosystem

Even though recent years have shown a slow recovery of the Eurasian otter (Lutra lutra) populations from their previous lows, the species is still highly endangered in most parts of its European distribution range. Surprisingly, only a few studies have so far assessed the species’ genetic variability and population density, and they have mostly been carried out only in small territories. In Germany, most otter populations live in protected areas whose management urgently needs data on population sizes and densities as well as on genetic variability of the species under their custody. Thus, we analyzed genetic variability and assessed size and density of the otter population in the Bohemian Forest Ecosystem, an area that had not been included in the few previous molecular studies. The study area comprised of 1500 km², divided into fifteen squares of 10 × 10 km², each of which was sampled in two collection periods. Overall we collected 261 fecal samples (spraints), of which 60 (23%) could be genotyped at least at eight microsatellite loci, yielding 38 distinct otter genotypes. The low genotyping success rate was the result of high ambient temperature at the time of sampling rather than that of high humidity. The population did not show signs of a past bottleneck, indicating a small yet stable population size. Population size was estimated to be 118 (CI_95% 64–163) individuals, with a mean density of 1 animal per 8.5 km² or 3.1 km river length. Our results imply that hunting, requested by local fishpond owners, should remain banned to avoid a decline in (effective) population size.     

Seasonal Abundance and Reproduction of the Fourwing Flyingfish, Hirundichthys affinis, off Barbados

The seasonal abundance and reproductive cycle of the flyingfish Hirundichthys affinis was studied near Barbados. H. affinis shows large seasonal variation in abundance. They are common between December and June and scarce from July to November. The population size structure of H. affinis was determined by fishing with four different mesh sizes throughout one year. There appear to be two cohorts of H. affinis present in May and June, one of immature fish with a mean size of 19.8cm FL, and one of mature fish with a mean size of 21.7cm FL. From September to April there is only a single cohort of maturing fish with a mean size that increases from 20.4cm FL in September to 22.0cm FL in April. H. affinis spawns throughout the fishing-season (December–June) and shows a peak in spawning activity from March to June. Immature fish are present in Barbados waters from July to November but in very low abundance. Surface water temperature, wind speed and swell height are the only environmental factors with which catch rate of H. affinis showed significant correlation. Catch rate appears to be negatively correlated with temperature, whereas for wind speed and swell height there are optima. Three hypotheses for the seasonal variation in abundance of H. affinis were examined. The hypothesis that this species remains dispersed near Barbados during the off-season was rejected. The other hypotheses were refined. Both post-spawning mortality, resulting in an interval of low abundance between cohorts (non-overlapping generations), and migration of fish away from Barbados at the end of the fishing season, remain possible explanations for the observed seasonal variation in abundance of this species.     

基于微卫星的欧亚水獭个体识别和遗传多样性

种群数量和遗传多样性是保护濒危物种所需的基础信息。欧亚水獭(Lutra lutra)属于国家二级保护动物,曾经在我国分布广泛,但在20世纪经历了大规模的种群数量下降和分布区缩减。欧亚水獭相关研究十分缺乏,种群数量调查和遗传多样性等基础研究亟待开展。本研究采用非损伤性取样法,于2019—2020年在青海省玉树藏族自治州玉树市和四川省广元市青川县的主要河流共采集270个欧亚水獭粪便样品并进行DNA提取,基于9个微卫星位点和SRY基因分子标记进行个体识别和性别鉴定,进而使用非损伤性标志重捕法Capwire估计两地水獭的种群数量,并基于微卫星分型数据评估两个种群的遗传多样性。最终共有67个粪便样品(24.8%)成功分型7～9个微卫星位点并用于个体识别,共识别出玉树市10个个体、青川县30个个体,雌雄性比分别为4：5、15：14,两地各有1个个体未成功鉴定性别。估计研究区域内玉树的水獭种群数量为13只(95%置信区间：7～21只)、青川县的水獭种群数量为75只(95%置信区间：59～133只)。玉树、青川种群的平均观测杂合度HO分别为0.680、0.664,平均期望杂合度HE分别为0.611、0.658,表明两个水獭种群均具有中等的微卫星遗传多样性。玉树、青川种群的平均FST为0.238,平均近亲繁殖系数FIS分别为-0.121、-0.010,表明两个水獭种群之间分化显著,且种群内近交程度低。本研究是我国大陆地区基于粪便DNA对欧亚水獭进行种群数量估计和遗传多样性评估,可为我国水獭的保护提供重要的基础信息。     

Unit pricing: Economics and the evolution of litter size

Variability in litter size and the concept of optimality are central to our current understanding of parental investment patterns and life histories. A fundamental component of most models of optimum litter size is an apparently inescapable trade-off between litter size and size of offspring. Most previous models of litter size have focused on the evolution of an optimum litter size rather than variability in litter size. Because variability provides the raw material from which numerous optimal litter sizes are fashioned to meet prevailing conditions, approaches that specifically address adaptive patterns of variability might provide new insights into the evolution of litter size. A model based on a non-linear relationship between total parental effort and litter size reduces trade-offs between offspring size and offspring number to simple reproductive economics, and illustrates how litter size variability might be predictable under certain environmental conditions. This revised version was published online in July 2006 with corrections to the Cover Date.     

Life History Variation in Female Gambusia hubbsi

Gambusia hubbsi populations occur in a variety of fresh and brackish-water habitats on Andros, Bahamas. These include shallow water sites (tidal creeks, lakes, roadside ditches), and blueholes (vertical solution caves). In some blueholes G. hubbsi is the only species present, in others it co-occurs with other species, principal among these is a predator, Eleotris pisonis. By contrast to blueholes, shallow water sites have highly variable temperature and depth. In addition, they are frequented by avian piscivores and may be occasionally occupied by piscivores such as Eleotris. We sampled 10 shallow water sites, 14 blueholes where Eleotris is absent and 12 blueholes where Eleotris co-occurs with G. hubbsi. We measured and compared variation in female body size, fecundity, and reproductive investment among these three habitats. The observed patterns of life history variation are only partially in accord with expectations from theory regarding the effects of predation and seasonality on life history variation. Samples from populations that colonized a series of man-made trenches (Well Fields), a set of introductions into that habitat, and changes in life history traits of lab-raised females from three blueholes, suggest that the observed pattern of life history variation in other habitats also reflects differences in food availability among habitats, and imperfectly reflects the potential phenotypic variability of this species.     

FecB基因在9个绵羊品种中的多态性及其与产羔数和羔羊生长发育的相关性

以绵羊BMPR-IB基因为候选基因,应用PCR-RFLP方法通过分析湖羊、夏洛来、陶赛特、萨福克、罗米丽、中国美利奴羊、中国美利奴肉用多胎品系以及陶赛特×中国美利奴羊和萨福克×中国美利奴羊杂交后代共615只个体的FecB基因多态性,以及BMPR-IB基因多态性对产羔数、体尺和体重的影响.结果表明,BMPR-IB基因在不同品种(系)绵羊中共有3种基因型(BB、B+和++),但基因型频率分布在各品种(系)间差异极显著(P<0.01).在湖羊中仅有BB基因型;在中国美利奴肉用多胎品系中BB、B+和++基因型频率分别为51%、30%和19%;而其他品种(系)羊中则仅有++基因型.对中国美利奴羊肉用多胎品系研究,发现BB和B+基因型群体平均产羔数分别为2.8和2.3,显著高于++基因型群体(1.2,P<0.01).在90日龄时,BB和B+基因型群体的体重分别为18.6±3.70 kg和18.0±3.31 kg,显著高于++基因型群体(15.6±2.22kg,P<0.05);此外,90日龄时,BB和B+基因型群体比++基因型群体胸围、胸宽较大(P<0.05);但这些差异在120日龄时消失.另外,我们还发现不同地区群体的第一胎产羔数存在明显差别.这些结果表明,BMPR-IB基因为影响绵羊产羔数的主效基因,并首次证明该基因对后代羔羊出生后生长发育具有加性效应.     

Relationships of reproductive traits and body size with attainment of sexual maturity and age in Blanding's turtles (Emydoidea blandingi)

To place associations among body size, age at maturity, age, and reproductive traits of a long-lived organism in the context of current life history models based on the concept of norms of reaction, we examined data from a mark-recapture study of Blanding's turtles (Emydoidea blandingi) in southeastern Michigan during 24 of the years between 1953 and 1988. Females matured between 14 and 20 years of age. Both the smallest and largest adult females in the population were reproducing for the first time in their lives. This result suggests that a combination of differences in juvenile growth rates and ages at maturity, and not indeterminate growth, are the primary cause of variation in body size among adults. Body size variation among individuals was not related to age at sexual maturity. Females that had slower growth rates as juveniles matured later at similar mean body size compared to those with more rapid growth that matured at an earlier age. As a result, a linear model of age at sexual maturity with growth rates of primiparous females between hatching and maturity was significant and negative (R² = 0.76). Frequency of reproduction of the largest and smallest females was not significantly different. Clutch size did not vary significantly with age among either primiparous or multiparous females. Clutch sizes of primiparous females and multiparous females were not significantly different. However, older females (>55 years minimum age) reproduced more frequently than did younger females (minimum age <36 y).     

Functional heterogeneity of dry-season fish refugia across a Mediterranean catchment: the role of habitat and predation

SUMMARY 1. Fish in Mediterranean streams survive through the summer in residual surface waters, encompassing a broad range of abiotic and biotic conditions. Yet, the extent to which fish assemblages may be shaped by functional heterogeneity in dry-season refugia is largely unknown. This study addresses this issue, by examining fish assemblage and population attributes, and predation patterns in residual summer habitats (12 pools and six runs) across a Mediterranean catchment in south-west Portugal.
2. Species richness was fairly constant among runs but increased with pool size, with the addition of exotics and rare natives to large pools resulting in nested subsets. The four most common species (chub, nase, loach and eel) were considered generalists in terms of their use of dry-season refugia. Conversely, rare species presented more specialised habitats, with barbel and exotics favouring pools and stickleback favouring runs.
3. Age and size of the two most common species varied among dry-season habitats. Age 0 chub were restricted to runs, where spawning stages (age 2 and older fish) were also more represented. Age 0 nase also concentrated in runs, but the individuals collected in pools exhibited greater growth. Conversely, age 2 and older nase were proportionally more abundant in pools, but with greater growth and better condition in runs.
4. The otter was the main fish predator, consuming fish of all species and size classes, irrespective of habitat. Otter activity concentrated in pools, where predation risk for cyprinids seemed to be much higher than in runs.
5. Dry-season refugia apparently vary in functional importance for different fish species and life stages, acting as complementary units in the landscape. Therefore, the presence of both pool and run refugia trough the summer dry season may play a critical role in promoting the persistence of native species in Mediterranean streams.     

Impact of the ESR gene on litter size and production traits in Czech Large White pigs

To evaluate the effect of the PvuII polymorphism of the oestrogen receptor gene on litter size and production traits in Czech Large White swine, data from 1250 sows and 3600 litters were analysed with two four-trait animal models. The traits in the first model were number of piglets born alive in a sow's first litter, number of piglets born alive in second and subsequent litters, lifetime daily gain and lean meat percentage. The second model included number of piglets born, number of piglets born alive, number of piglets weaned and litter weight at weaning from first and subsequent litters. The oestrogen receptor (ESR) locus significantly affected prolicacy in the first parity and averaged over all parities (P < 0.05), with allele A superior to allele B. In the first parity, AA sows produced approximately 0.5 more live piglets per litter than BB sows. Averaged over all parities, this difference was c. 0.25 piglets. Results for total number of piglets born and number of piglets weaned were similar to results for numbers born alive. No significant dominance effect was found for prolificacy traits. For litter weight at weaning, no significant additive effect was observed at the ESR locus, but a significant negative dominance effect (-1.5 kg) was estimated averaged across parities (litters of AB sows were similar to litters of BB sows for this trait). No pleiotropic effect of the ESR polymorphism on average daily gain or lean meat percentage was found.     

Litter Overlap in Gambusia hubbsi: Superfetation Revisited

The frequency of litter overlap, the simultaneous presence of two litters at different stages of development within a single female, varies among populations of Gambusia hubbsi in different habitats on Andros, Bahamas. In freshwater bluehole and shallow water populations, less than 2% of the females carried two litters, independent of the difference in developmental stage between the litters. In well field populations, 2% of the females carried two litters composed of immature and mature oocytes, whereas 10% carried developing oocytes and late stage embryos, and 16% carried mature oocytes (or older) and late stage embryos. Among females from populations that we introduced into unoccupied well fields 2% carried two litters composed of immature and mature oocytes, about 14% carried developing oocytes and late stage embryos, and less than 6% carried mature oocytes (or older) and late stage embryos. When two litters composed developing oocytes and late stage embryos were present, the two litters were of equal size, and the total number of offspring was 1.5 times larger than expected on the basis of female body length. When two litters composed mature oocytes (or older stages) and late stage embryos were present, the two litters were also of equal size, and the total number of offspring was as expected on the basis of female body length. Litter overlap was independent of female size. A comparison of the consequences of litter overlap for strictly lecithotrophic and strictly matrotrophic modes of reproduction with the patterns of litter overlap observed in G. hubbsi, suggests that litter overlap in G. hubbsi reduces the cost of reproduction, but does not increase the rate of offspring production.