cis- and trans-phytoene in Verticillium agaricinum

cis-Phytoene and trans-phytofluene were identified in illuminated cultures of Verticillium agaricinum in addition to the other carotenoids     

Transesterification of farnesol mediated by a lipase from Andrographis tissue cultures

A cell-free system from Andrographis paniculata tissue cultures catalysed the transesterification of administered cis, trans-farnesol-[1-³H₂] with (glyceryl) oleate and palmitate present in the coconut water that forms part of the culture medium.     

Formation of three new flavones by differentiating callus cultures of andrographis paniculata

Differentiating tissue cultures of Andrographis paniculata produce three new flavones, 5-hydroxy-7,8,2′-trimethoxy-, 5,2′-dihydroxy-7,8-dimethoxy- and 5-hydroxy-7,8-dimethoxy-flavones. Flavones are not synthesized by the de-differentiated callus. Closely related flavones have been isolated from intact plants of Andrographis species.     

Syntheses of cis and trans 2-methoxy-4,5-methylenedioxycinnamoylpiperidide and revised structure of a new alkaloid from Piper peepuloides

The structure of a new alkaloid isolated from Piper peepuloides has been revised as 2-methoxy-4,5-methylenedioxy-cis-cinnamoylpiperidide. The revision is based upon spectral evidence and syntheses of both isomers. The synthesis of the cis isomer has been accomplished through an intermediate obtained by a novel ring opening of the coumarin ‘ayapin’ using sodium hydride and methyl iodide in tetrahydrofuran.     

The structure and stereochemistry of phlogantholide-A,a diterpene from Phlogacanthus thyrsiflorus

The structure and stereochemistry of phlogantholide-A, a new diterpene lactone isolated from the leaves of Phlogacanthus thyrsiflorus has been determined as 2β,15,18-trihydroxy-ent-labd-8(17),13-dien-16-oic lactone by chemical and spectroscopic means.     

Fungal regulatory evolution: cis and trans in the balance

Regulatory divergence is likely a major driving force in evolution. Comparative genomics is being increasingly used to infer the evolution of gene regulation. Ascomycota fungi are uniquely suited among eukaryotes for regulatory evolution studies, due to broad phylogenetic scope, many sequenced genomes, and tractability of genomic analysis. Here we review recent advances in the identification of the contribution of cis- and trans-factors to expression divergence. Whereas current strategies have led to the discovery of surprising signatures and mechanisms, we still understand very little about the adaptive role of regulatory evolution. Empirical studies including experimental evolution, comparative functional genomics and hybrid and engineered strains are showing early promise toward deciphering the contribution of regulatory divergence to adaptation.     

Roseadione,a diterpene ketone from Hypoestes rosea

A tricyclic diterpene ketone, roseadione, has been isolated from Hypoestes rosea and its structure established as a dicyclopenta[a, d]cyclo     

An irreversible inhibitor of peptidyl-prolyl cis/trans isomerase Pin1 and evaluation of cytotoxicity

Pin1 (protein interacting with never in mitosis A-1) is a member of the peptidyl prolyl isomerase (PPIase) family, and catalyzes cis-trans isomerization of pThr/Ser-Pro amide bonds. Because Pin1 is overexpressed in various cancer cell lines and promotes cell growth, it is considered a target for anticancer agents. Here, we designed and synthesized a covalently binding Pin1 inhibitor (S)-2 to target Pin1’s active site. This compound inhibited Pin1 in protease-coupled assay, and formed a covalent bond with Cys113 of Pin1, as determined by ESI-MS. The acetoxymethyl ester of (S)-2, i.e., 6, suppressed cyclin D1 expression in human prostate cancer PC-3 cells, and exhibited cytotoxicity. Pin1-knockdown experiments indicated that a target for the cytotoxicity of 6 is Pin1.     

Tetramethylputrescine from young plants of Ruellia rosea

Tetramethylputrescine was isolated from the roots and aerial parts of Ruellia rosea. The compound was characterized by MS, ¹³C-NMR-spectroscopy and comparison with a synthetic specimen.     

A triterpenoidal saponin from roots of Acanthus illicifolius

A new triterpenoidal saponin has been isolated from the ethanolic extract of Acanthus illicifolius. It was shown to be [α-l-arabinofuranosyl-(1 → 4)-β-d-glucuronopyranosyl(1 → 3)]-3β-hydroxy-lup-20 (29)-ene.     

Vasicol,a new alkaloid from Adhatoda vasica

A novel alkaloid isolated from the roots of Adhatoda vasica has been characterized as 1,2,3,4,9,11 hexahydro pyrrolo (2,1-b) quinazolin-3,11 diol by chemical and spectroscopic methods. Vasicinone has also been isolated from the roots of this plant.     

Different reaction mechanisms for cis- and trans-prenyltransferases

Octaprenyl diphosphate synthase (OPPs) and undecaprenyl diphosphate synthases (UPPs) catalyze consecutive condensation reactions of farnesyl diphosphate (FPP) with 5 and 8 isopentenyl diphosphate (IPP) to generate C₄₀ and C₅₅ products with trans- and cis-double bonds, respectively. In this study, we used IPP analogue, 3-bromo-3-butenyl diphosphate (Br-IPP), in conjunction with radiolabeled FPP, to probe the reaction mechanisms of the two prenyltransferases. Using this alternative substrate with electron-withdrawing bromo group at the C3 position to slow down the condensation step, trapping of farnesol in the OPPs reaction from radiolabeled FPP under basic condition was observed, consistent with a sequential mechanism. In contrast, UPPs reaction yielded no farnesyl carbocation intermediate under the same condition with radiolabeled FPP and Br-IPP, indicating a concerted mechanism. Our data demonstrate the different reaction mechanisms for cis- and tran-prenyltransferases although they share the same substrates.     

Biosynthesis of abscisic acid from farnesol derivatives in Cercospora rosicola

(E,E)?[1?¹⁴C]Farnesyl phosphate and (E,E)?[1?¹⁴C]farnesyl pyrophosphate were both converted to abscisic acid by Cercospora rosicola resuspensions. (E,E)?[1?¹⁴C]Farnesol, (E,Z)?[1?¹⁴C]farnesol, (E,Z)?[1?¹⁴C]farnesyl pyrophosphate, (E,E)?[1?¹⁴C]farnesic acid, and (E,Z)?[1?¹⁴C]farnesic acid were not converted to abscisic acid by the fungus. These findings provide information on the sequence of the reactions involved in converting farnesyl pyrophosphate to abscisic acid. Specifically, they suggest that the transformations involving the three terminal carbons in the side chain occur after one or more changes elsewhere in the molecule.     

9-Hydroxydodecanoic acid,an acid from Blepharis sindica seed oil

A hitherto unknown hydroxy acid has been isolated from Blepharis sindica seed oil has been characterized as 9-hydroxydodecanoic acid by IR, NMR and mass spectral studies. The structure of this acid was further supported by its chemical transformations.     

Fatty acids of Pinus elliottii tissues

The total fatty constituents of slash pine (Pinus elliottii) tissue cultures, seeds and seedlings were examined by GLC and MS. Qualitatively, the fatty acid composition of these tissues was very similar to that reported for other pine species. The fatty acid contents of the tissue cultures resembled that of the seedling tissues. In addition to the fatty acids common to botanical materials, Δ⁵-C₁₈ and -C₂₀ nonmethy lene-interrupted polyunsaturated acids were present in low relative abundances. The branched-chain C₁₇ acid reported for several other Pinus species was confirmed as the anteiso isomer.     

Biosynthesis of trans-2-hexenal in chloroplasts from Thea sinensis

The biosynthetic pathway of trans-2-hexenal, leaf aldehyde, in isolated chloroplasts of Thea sinensis leaves. was examined using a tracer experiment. A high and specific incorporation of radioactivity into cis-3-hexenal and trans-2-hexenal, was observed when linolenic acid-[U-¹⁴C] was incubated with the isolated chloroplasts. Thus, trans-2-hexenal was biosynthesized via cis-3-hexenal from linolenic acid in the chloroplasts.     

Polyamine oxidation by enzymes from Hordeum vulgare and Pisum sativum seedlings

The properties of the amine oxidases of barley leaves and pea seedling cotyledons have been compared using a colorimetric assay in which the hydrogen p     

Effects of cis and trans regulatory variations on the expression divergence of heat shock response genes between yeast strains

Phenotypic variation among individuals in a population can be due to DNA sequence variation in protein coding regions or in regulatory elements. Recently, many studies have indicated that mutations in regulatory elements may be the major cause of phenotypic evolution. However, the mechanisms for evolutionary changes in gene expression are still not well understood. Here, we studied the relative roles of cis and trans regulatory changes in Saccharomyces cerevisiae cells to cope with heat stress. It has been found that the expression level of ~ 300 genes was induced at least two fold and that of ~ 500 genes was repressed at least two fold in response to heat shock. From the former set of genes, we randomly selected 65 genes that showed polymorphism(s) between the BY and RM strains for pyrosequencing analysis to explore the relative contributions of cis and trans regulatory variations to the expression divergence between BY and RM. Our data indicated that the expression divergence between BY and RM was mainly due to trans regulatory variations under either the normal condition or the heat stress condition. However, the relative contribution of trans regulatory variation was decreased from 76.9% to 61.5% after the heat shock stress. These results indicated that the cis regulatory variation may play an important role in the adaption to heat stress. In our data, 43.1% (28 genes) of the 65 genes showed the same trend of cis or trans variation effect after the heat shock stress, 35.4% (23 genes) showed an increased cis variation effect and 21.5% (14 genes) showed an increased trans variation effect after the heat shock stress. Thus, our data give insights into the relative roles of cis and trans variations in response to heat shock in yeast.     

Effect of cis-9,trans-11 and trans-10,cis-12 isomers of conjugated linoleic acid on the integrity and functionality of cryopreserved bovine spermatozoa

Plasma membranes of sperm subjected to low temperatures undergo changes in their structure and permeability. The addition of fatty acids in semen cryopreservation media may influence the sperm motility after thawing, possibly by maintaining the membrane fluidity due to their incorporation in lipid bilayers. In this work, different concentrations of the isomers cis-9,trans-11 and trans-10,cis-12 of conjugated linoleic acid (CLA) were added in the cryopreservation medium of bovine sperm. Four Jersey bulls were used, and the ejaculates were processed as a pool. The Tris-based extender (Dilutris®) was supplemented with 20% egg yolk (MB). The treatments with CLA (Luta-CLA®), which had oily presentation, were prepared from MB with addition of 1% sodium lauryl sulfate, and denominated MBL. The concentrations of CLA tested were 50, 100, and 150 μM. The motility characteristics of the post-thaw semen were analyzed by computerized analysis system (CASA), and plasma membrane integrity and acrosomal and mitochondrial function assessed by the association of the fluorescent probes propidium iodide, fluorescein isothiocyanate-conjugated Pisum sativum agglutinin (FITC-PSA), JC-1 and Hoechst 33342. No significant differences were observed among treatments, excepting for a decreased mitochondrial potential of cells treated with 150 μM CLA. The addition of CLA, at the concentrations used, showed no advantages on the integrity and functionality of bovine sperm submitted to cryopreservation.     

Polyphenols of mature plant,seedling and tissue cultures of Theobroma cacao

The major flavone in mature cocoa leaves is isovitexin, with smaller amounts of vitexin and 7-O-glucosides of apigenin, luteolin and chrysoeriol. F